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perform-service_broken
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git-svn-id: http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/application/perform-service@176736 82a268e6-3cf1-43bd-a215-b396298e98cf

This commit is contained in:
Fabio Sinibaldi 2019-01-22 18:12:55 +00:00
parent 7a0a558425
commit 54b1f808a9
3 changed files with 37 additions and 52 deletions
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13
src/main/java/org/gcube/application/perform/service/engine/impl/ImporterImpl.java
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@ -20,7 +20,6 @@ import org.gcube.application.perform.service.engine.dm.ImporterMonitor;
import org.gcube.application.perform.service.engine.model.BeanNotFound; import org.gcube.application.perform.service.engine.model.BeanNotFound;
import org.gcube.application.perform.service.engine.model.DBField.ImportRoutine; import org.gcube.application.perform.service.engine.model.DBField.ImportRoutine;
import org.gcube.application.perform.service.engine.model.DBQueryDescriptor; import org.gcube.application.perform.service.engine.model.DBQueryDescriptor;
import org.gcube.application.perform.service.engine.model.ISQueryDescriptor;
import org.gcube.application.perform.service.engine.model.InternalException; import org.gcube.application.perform.service.engine.model.InternalException;
import org.gcube.application.perform.service.engine.model.importer.ImportRequest; import org.gcube.application.perform.service.engine.model.importer.ImportRequest;
import org.gcube.application.perform.service.engine.model.importer.ImportRoutineDescriptor; import org.gcube.application.perform.service.engine.model.importer.ImportRoutineDescriptor;
@ -41,21 +40,9 @@ public class ImporterImpl implements Importer {
private static final Logger log= LoggerFactory.getLogger(ImporterImpl.class); private static final Logger log= LoggerFactory.getLogger(ImporterImpl.class);
private static ISQueryDescriptor isQueryDescriptor=null;
// private static synchronized ISQueryDescriptor getISQueryDescriptor() {
// if(isQueryDescriptor==null) {
// isQueryDescriptor=
// new ISQueryDescriptor(
// LocalConfiguration.getProperty(LocalConfiguration.MAPPING_DB_ENDPOINT_NAME), null,
// LocalConfiguration.getProperty(LocalConfiguration.MAPPING_DB_ENDPOINT_CATEGORY));
// }
// return isQueryDescriptor;
// }
private static final String getHostname() { private static final String getHostname() {
try{ try{
ApplicationContext context=ContextProvider.get(); ApplicationContext context=ContextProvider.get();

4
src/main/java/org/gcube/application/perform/service/engine/impl/PerformanceManagerImpl.java
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@ -47,7 +47,7 @@ public class PerformanceManagerImpl implements PerformanceManager{
} }
@Override @Override
public Map<String, String> generateCSV(CSVExportRequest request) throws InvalidRequestException, SQLException, InternalException, IOException { public Map<String, String> generateCSV(CSVExportRequest request) throws SQLException, InvalidRequestException, InternalException, IOException {
log.trace("Serving {} ",request); log.trace("Serving {} ",request);
HashMap<String,String> toReturn=new HashMap<>(); HashMap<String,String> toReturn=new HashMap<>();
Set<ImportedTable> tables=getAnalysisSet(request); Set<ImportedTable> tables=getAnalysisSet(request);
@ -66,7 +66,7 @@ public class PerformanceManagerImpl implements PerformanceManager{
} }
@Override @Override
public void loadOutputData(ImportRoutineDescriptor desc) throws IOException, SQLException, InternalException { public void loadOutputData(ImportRoutineDescriptor desc) throws SQLException, InvalidRequestException, InternalException, IOException{
log.info("Importing output for {} ",desc); log.info("Importing output for {} ",desc);
ComputationId computation=DMUtils.getComputation(desc); ComputationId computation=DMUtils.getComputation(desc);
Map<String,String> outputs=DMUtils.getOutputFiles(computation); Map<String,String> outputs=DMUtils.getOutputFiles(computation);

72
src/main/java/org/gcube/application/perform/service/rest/Performance.java
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@ -1,7 +1,6 @@
package org.gcube.application.perform.service.rest; package org.gcube.application.perform.service.rest;
import java.sql.SQLException; import java.sql.SQLException;
import java.util.HashMap;
import java.util.Map; import java.util.Map;
import javax.inject.Inject; import javax.inject.Inject;
@ -11,14 +10,17 @@ import javax.ws.rs.Produces;
import javax.ws.rs.WebApplicationException; import javax.ws.rs.WebApplicationException;
import javax.ws.rs.core.Context; import javax.ws.rs.core.Context;
import javax.ws.rs.core.MediaType; import javax.ws.rs.core.MediaType;
import javax.ws.rs.core.MultivaluedMap;
import javax.ws.rs.core.Response; import javax.ws.rs.core.Response;
import javax.ws.rs.core.UriInfo; import javax.ws.rs.core.UriInfo;
import org.gcube.application.perform.service.PerformServiceManager; import org.gcube.application.perform.service.PerformServiceManager;
import org.gcube.application.perform.service.ServiceConstants; import org.gcube.application.perform.service.ServiceConstants;
import org.gcube.application.perform.service.engine.PerformanceManager; import org.gcube.application.perform.service.engine.PerformanceManager;
import org.gcube.application.perform.service.engine.model.CSVExportRequest;
import org.gcube.application.perform.service.engine.model.InternalException; import org.gcube.application.perform.service.engine.model.InternalException;
import org.gcube.application.perform.service.engine.model.InvalidRequestException; import org.gcube.application.perform.service.engine.model.InvalidRequestException;
import org.gcube.application.perform.service.engine.model.importer.AnalysisType;
import org.gcube.smartgears.annotations.ManagedBy; import org.gcube.smartgears.annotations.ManagedBy;
import org.slf4j.Logger; import org.slf4j.Logger;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
@ -30,8 +32,8 @@ public class Performance {
private static final Logger log= LoggerFactory.getLogger(Performance.class); private static final Logger log= LoggerFactory.getLogger(Performance.class);
// @Inject @Inject
// private PerformanceManager perform; private PerformanceManager perform;
/** /**
@ -47,42 +49,38 @@ public class Performance {
@Produces(MediaType.APPLICATION_JSON) @Produces(MediaType.APPLICATION_JSON)
public Map<String,String> getPerformance(@Context UriInfo info){ public Map<String,String> getPerformance(@Context UriInfo info){
try { try {
// MultivaluedMap<String, String> parameters=info.getQueryParameters(); MultivaluedMap<String, String> parameters=info.getQueryParameters();
// log.info("Forming request from {}",parameters); log.info("Forming request from {}",parameters);
// String batchType=InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.BATCH_TYPE_PARAMETER, true).get(0); String batchType=InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.BATCH_TYPE_PARAMETER, true).get(0);
//
// CSVExportRequest request=new CSVExportRequest( new AnalysisType(batchType, batchType)); CSVExportRequest request=new CSVExportRequest( new AnalysisType(batchType, batchType));
//
// request.addAreas(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.AREA_PARAMETER, false)); request.addAreas(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.AREA_PARAMETER, false));
// request.addQuarters(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.QUARTER_PARAMETER, false)); request.addQuarters(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.QUARTER_PARAMETER, false));
// for(String s:InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.FARM_ID_PARAMETER, true)) for(String s:InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.FARM_ID_PARAMETER, true))
// request.addFarmId(Long.parseLong(s)); request.addFarmId(Long.parseLong(s));
//
// request.addSpecies(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.SPECIES_ID_PARAMETER, false)); request.addSpecies(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.SPECIES_ID_PARAMETER, false));
// request.addPeriods(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.PERIOD_PARAMETER, false)); request.addPeriods(InterfaceCommons.getParameter(parameters, ServiceConstants.Performance.PERIOD_PARAMETER, false));
//
//
// log.debug("Export request : {} ",request);
//
// return perform.generateCSV(request);
HashMap<String,String> toReturn=new HashMap();
toReturn.put("BatchesTable", "aslfgurt-dfgumk374");
toReturn.put("AntiparasiticTable", "aslfgurt-dfgumk374");
return toReturn;
// }catch(NumberFormatException e) { log.debug("Export request : {} ",request);
// throw new WebApplicationException(String.format("Unable to parse parameters."),Response.Status.BAD_REQUEST);
// }catch(SQLException e) { return perform.generateCSV(request);
// log.debug("Exception while getting Batch",e);
// throw new WebApplicationException("Unexpected Exception occurred while dealing with database.", e,Response.Status.INTERNAL_SERVER_ERROR);
// } catch (InvalidRequestException e) {
// log.debug("Exception while getting Batch",e); }catch(NumberFormatException e) {
// throw new WebApplicationException("Unable to search for Batch. ",e,Response.Status.BAD_REQUEST); throw new WebApplicationException(String.format("Unable to parse parameters."),Response.Status.BAD_REQUEST);
// } catch (InternalException e) { }catch(SQLException e) {
// log.warn("Unexpected Exception while getting Batch",e); log.debug("Exception while getting Batch",e);
// throw new WebApplicationException("Unexpected Exception.", e,Response.Status.INTERNAL_SERVER_ERROR); throw new WebApplicationException("Unexpected Exception occurred while dealing with database.", e,Response.Status.INTERNAL_SERVER_ERROR);
} catch (InvalidRequestException e) {
log.debug("Exception while getting Batch",e);
throw new WebApplicationException("Unable to search for Batch. ",e,Response.Status.BAD_REQUEST);
} catch (InternalException e) {
log.warn("Unexpected Exception while getting Batch",e);
throw new WebApplicationException("Unexpected Exception.", e,Response.Status.INTERNAL_SERVER_ERROR);
}catch(Throwable t) { }catch(Throwable t) {
log.warn("Unexpected Exception while getting Batch",t); log.warn("Unexpected Exception while getting Batch",t);
throw new WebApplicationException("Unexpected Exception.", t,Response.Status.INTERNAL_SERVER_ERROR); throw new WebApplicationException("Unexpected Exception.", t,Response.Status.INTERNAL_SERVER_ERROR);