ref 16252: NLP Hub portlet not working when token is passed

https://support.d4science.org/issues/16252

Fixed DataMiner Discover by token

git-svn-id: http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/nlphub@178557 82a268e6-3cf1-43bd-a215-b396298e98cf

src/main/java/org/gcube/data/analysis/nlphub/is/DMDiscover.java

@@ -13,12 +13,16 @@ public class DMDiscover {
 
 	private static Logger logger = LoggerFactory.getLogger(DMDiscover.class);
 
+	public DMDiscover() {
+
+	}
+
 	public String retrieveServiceUrl(String token) throws Exception {
 		logger.debug("Retrieve DataMiner Service by token: " + token);
 		String scope = retrieveScope(token);
-		logger.debug("Retrieve DataMiner Service in scope: "+scope);
+		logger.debug("Retrieve DataMiner Service in scope: " + scope);
-		String url= retrieveServiceInScope(scope);
+		String url = retrieveServiceInScope(scope);
-		logger.debug("DataMiner url: "+url);
+		logger.debug("DataMiner url: " + url);
 		return url;
 	}
 

src/main/java/org/gcube/data/analysis/nlphub/legacy/NerAnnotationData.java

@@ -14,28 +14,19 @@ public class NerAnnotationData {
 	private String name;
 	private ArrayList<NerEntity> nerEntities;
 	
-	/**
+	
-	 * Class constructor; require the name of the annotation
-	 * @param name
-	 */
 	public NerAnnotationData(String name) {
 		logger.debug("NerAnnotationData: "+name);
 		this.name = name;
 		nerEntities = new ArrayList<>();
 	}
 	
-	/**
+	
-	 * add a new NerEntity to the collection
-	 * @param entity
-	 */
 	public void addNerEntity(NerEntity entity) {
 		nerEntities.add(entity);
 	}
 
-	/**
+	
-	 * build the proper Json object.
-	 * @return JsonObject
-	 */
 	public JsonObject toJson() {
 		JsonObject json = new JsonObject();
 		JsonArray entities = new JsonArray();

src/main/java/org/gcube/data/analysis/nlphub/legacy/NerEntity.java

@@ -30,8 +30,8 @@ public class NerEntity {
 	
 	/**
 	 * Add an additional property (property is a couple {name, value})
-	 * @param name
+	 * @param name name 
-	 * @param value
+	 * @param value value
 	 */
 	public void addProperty(String name, String value) {
 		properties.put(name, value);

src/main/java/org/gcube/data/analysis/nlphub/nlp/NLpLanguageRecognizer.java

@@ -48,16 +48,19 @@ public class NLpLanguageRecognizer {
 	public static void run(String dataMiner, String sentence, String token, String publicLink,
 			HttpServletResponse response) throws NlpHubException {
 		try {
-			try {
+
-				DMDiscover discoverDataMinerService=new DMDiscover();
+			if (dataMiner == null || dataMiner.isEmpty()) {
-				dataMiner=discoverDataMinerService.retrieveServiceUrl(token);
+				try {
-			} catch (Exception e) {
+					DMDiscover discoverDataMinerService = new DMDiscover();
-				logger.error("Error retrieving DataMiner service:" + e.getMessage(),e);
+					dataMiner = discoverDataMinerService.retrieveServiceUrl(token);
-				throw new  Exception("Error retrieving DataMiner service:" + e.getMessage());
+				} catch (Exception e) {
+					logger.error("Error retrieving DataMiner service:" + e.getMessage(), e);
+					throw new Exception("Error retrieving DataMiner service:" + e.getMessage());
+				}
 			}
-			
+
-			//else
+			// else
-			//	dataMiner = "http://" + dataMiner;
+			// dataMiner = "http://" + dataMiner;
 			String urlService = dataMiner + "?request=Execute&service=WPS&Version=1.0.0";
 			urlService += "&gcube-token=" + token;
 			urlService += "&lang=en-US";

src/main/java/org/gcube/data/analysis/nlphub/nlp/NlpAsyncNerRunner.java

@@ -33,21 +33,20 @@ public class NlpAsyncNerRunner extends AsyncHttpRequest {
 	public NlpAsyncNerRunner(String dataMiner, String identifier, String token, String publicLink, String annotations,
 			String language, RunnerCommander commander) throws Exception {
 		super();
-		this.commander=commander;
+		this.commander = commander;
-		this.identifier=identifier;
+		this.identifier = identifier;
 		String httpMethod = "GET";
-		
+
-		
+		if (dataMiner == null || dataMiner.isEmpty()) {
-		try {
+			try {
-			DMDiscover discoverDataMinerService=new DMDiscover();
+				DMDiscover discoverDataMinerService = new DMDiscover();
-			dataMiner=discoverDataMinerService.retrieveServiceUrl(token);
+				dataMiner = discoverDataMinerService.retrieveServiceUrl(token);
-		} catch (Exception e) {
+			} catch (Exception e) {
-			logger.error("Error retrieving DataMiner service:" + e.getMessage(),e);
+				logger.error("Error retrieving DataMiner service:" + e.getMessage(), e);
-			throw new  Exception("Error retrieving DataMiner service:" + e.getMessage());
+				throw new Exception("Error retrieving DataMiner service:" + e.getMessage());
+			}
 		}
-		
+
-			
-			
 		// else
 		// this.dataMiner = "http://" + dataMiner;
 		logger.debug("NlpAsyncNerRunner: Create Excution Request");
@@ -63,29 +62,25 @@ public class NlpAsyncNerRunner extends AsyncHttpRequest {
 		serviceUrl.append("&");
 		serviceUrl.append(setParams(params));
 		serviceUrl.append("&gcube-token=" + token);
-		
+
 		logger.debug("NlpAsyncNerRunner: [serviceUrl=" + serviceUrl + ", method=" + httpMethod + "]");
 		super.setBaseUrl(serviceUrl.toString());
 		super.setMethod(httpMethod);
 	}
 
-	/*public NlpAsyncNerRunner(String baseUrl, String method) {
+	/*
-		super(baseUrl, method, null);
+	 * public NlpAsyncNerRunner(String baseUrl, String method) { super(baseUrl,
-	}*/
+	 * method, null); }
+	 */
 
 	/*
-	public String getIdentifier() {
+	 * public String getIdentifier() { return identifier; }
-		return identifier;
+	 * 
-	}
+	 * 
-
+	 * public String getToken() { return token; }
-
+	 * 
-	public String getToken() {
+	 * public String getHttpMethod() { return httpMethod; }
-		return token;
+	 */
-	}
-
-	public String getHttpMethod() {
-		return httpMethod;
-	}*/
 
 	private String setParams(ArrayList<NlpParameter> parameters) {
 		logger.debug("Set Params");
@@ -116,7 +111,7 @@ public class NlpAsyncNerRunner extends AsyncHttpRequest {
 			serviceUrl.append(token);
 
 			URL url = new URL(serviceUrl.toString());
-			
+
 			connection = (HttpURLConnection) url.openConnection();
 			connection.setRequestMethod("GET");
 			connection.setDoInput(true);

src/main/webapp/index.jsp

@@ -28,7 +28,7 @@
 	 String requestToken=request.getParameter(Constants.TOKEN_PARAMETER);
 	 if( requestToken == null||requestToken.isEmpty()) {
 	 %>
-	 var gCubeToken = "fea75a5a-d84c-495f-b0ca-09cdd95bacce-843339462";
+	 var gCubeToken = "d35c72d3-f6b5-4363-afbe-8e330ef9a913-843339462";
 	 <% } else { %>
 	 var gCubeToken = '<%=requestToken%>';