Compare commits
6 Commits
master
...
smartgears
Author | SHA1 | Date |
---|---|---|
lucio | e3c020ee43 | |
lucio | 3c2a5db252 | |
lucio | ea30e79309 | |
lucio | bc3320131e | |
lucio | f0f69162a3 | |
Lucio Lelii | aedb52a34d |
27
.classpath
27
.classpath
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@ -6,13 +6,6 @@
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||||||
<attribute name="maven.pomderived" value="true"/>
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<attribute name="maven.pomderived" value="true"/>
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||||||
</attributes>
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</attributes>
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||||||
</classpathentry>
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</classpathentry>
|
||||||
<classpathentry kind="src" output="target/test-classes" path="src/test/java">
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||||||
<attributes>
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||||||
<attribute name="optional" value="true"/>
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|
||||||
<attribute name="maven.pomderived" value="true"/>
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|
||||||
<attribute name="test" value="true"/>
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|
||||||
</attributes>
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|
||||||
</classpathentry>
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|
||||||
<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER">
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<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER">
|
||||||
<attributes>
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<attributes>
|
||||||
<attribute name="maven.pomderived" value="true"/>
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<attribute name="maven.pomderived" value="true"/>
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||||||
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@ -23,5 +16,25 @@
|
||||||
<attribute name="maven.pomderived" value="true"/>
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<attribute name="maven.pomderived" value="true"/>
|
||||||
</attributes>
|
</attributes>
|
||||||
</classpathentry>
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</classpathentry>
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||||||
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<classpathentry excluding="**" kind="src" output="target/classes" path="src/main/resources">
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||||||
|
<attributes>
|
||||||
|
<attribute name="maven.pomderived" value="true"/>
|
||||||
|
<attribute name="optional" value="true"/>
|
||||||
|
</attributes>
|
||||||
|
</classpathentry>
|
||||||
|
<classpathentry kind="src" output="target/test-classes" path="src/test/java">
|
||||||
|
<attributes>
|
||||||
|
<attribute name="optional" value="true"/>
|
||||||
|
<attribute name="maven.pomderived" value="true"/>
|
||||||
|
<attribute name="test" value="true"/>
|
||||||
|
</attributes>
|
||||||
|
</classpathentry>
|
||||||
|
<classpathentry excluding="**" kind="src" output="target/test-classes" path="src/test/resources">
|
||||||
|
<attributes>
|
||||||
|
<attribute name="maven.pomderived" value="true"/>
|
||||||
|
<attribute name="test" value="true"/>
|
||||||
|
<attribute name="optional" value="true"/>
|
||||||
|
</attributes>
|
||||||
|
</classpathentry>
|
||||||
<classpathentry kind="output" path="target/classes"/>
|
<classpathentry kind="output" path="target/classes"/>
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||||||
</classpath>
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</classpath>
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||||||
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|
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@ -0,0 +1 @@
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||||||
|
/target/
|
13
.project
13
.project
|
@ -5,21 +5,11 @@
|
||||||
<projects>
|
<projects>
|
||||||
</projects>
|
</projects>
|
||||||
<buildSpec>
|
<buildSpec>
|
||||||
<buildCommand>
|
|
||||||
<name>org.eclipse.wst.common.project.facet.core.builder</name>
|
|
||||||
<arguments>
|
|
||||||
</arguments>
|
|
||||||
</buildCommand>
|
|
||||||
<buildCommand>
|
<buildCommand>
|
||||||
<name>org.eclipse.jdt.core.javabuilder</name>
|
<name>org.eclipse.jdt.core.javabuilder</name>
|
||||||
<arguments>
|
<arguments>
|
||||||
</arguments>
|
</arguments>
|
||||||
</buildCommand>
|
</buildCommand>
|
||||||
<buildCommand>
|
|
||||||
<name>org.eclipse.wst.validation.validationbuilder</name>
|
|
||||||
<arguments>
|
|
||||||
</arguments>
|
|
||||||
</buildCommand>
|
|
||||||
<buildCommand>
|
<buildCommand>
|
||||||
<name>org.eclipse.m2e.core.maven2Builder</name>
|
<name>org.eclipse.m2e.core.maven2Builder</name>
|
||||||
<arguments>
|
<arguments>
|
||||||
|
@ -27,10 +17,7 @@
|
||||||
</buildCommand>
|
</buildCommand>
|
||||||
</buildSpec>
|
</buildSpec>
|
||||||
<natures>
|
<natures>
|
||||||
<nature>org.eclipse.jem.workbench.JavaEMFNature</nature>
|
|
||||||
<nature>org.eclipse.wst.common.modulecore.ModuleCoreNature</nature>
|
|
||||||
<nature>org.eclipse.jdt.core.javanature</nature>
|
<nature>org.eclipse.jdt.core.javanature</nature>
|
||||||
<nature>org.eclipse.m2e.core.maven2Nature</nature>
|
<nature>org.eclipse.m2e.core.maven2Nature</nature>
|
||||||
<nature>org.eclipse.wst.common.project.facet.core.nature</nature>
|
|
||||||
</natures>
|
</natures>
|
||||||
</projectDescription>
|
</projectDescription>
|
||||||
|
|
|
@ -1,8 +1,11 @@
|
||||||
eclipse.preferences.version=1
|
eclipse.preferences.version=1
|
||||||
|
org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled
|
||||||
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8
|
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8
|
||||||
org.eclipse.jdt.core.compiler.compliance=1.8
|
org.eclipse.jdt.core.compiler.compliance=1.8
|
||||||
|
org.eclipse.jdt.core.compiler.problem.assertIdentifier=error
|
||||||
org.eclipse.jdt.core.compiler.problem.enablePreviewFeatures=disabled
|
org.eclipse.jdt.core.compiler.problem.enablePreviewFeatures=disabled
|
||||||
|
org.eclipse.jdt.core.compiler.problem.enumIdentifier=error
|
||||||
org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning
|
org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning
|
||||||
org.eclipse.jdt.core.compiler.problem.reportPreviewFeatures=ignore
|
org.eclipse.jdt.core.compiler.problem.reportPreviewFeatures=warning
|
||||||
org.eclipse.jdt.core.compiler.release=disabled
|
org.eclipse.jdt.core.compiler.release=disabled
|
||||||
org.eclipse.jdt.core.compiler.source=1.8
|
org.eclipse.jdt.core.compiler.source=1.8
|
||||||
|
|
|
@ -1,8 +1,8 @@
|
||||||
This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
|
This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
|
||||||
|
|
||||||
# Changelog
|
# Changelog for Gcube security
|
||||||
|
|
||||||
## [v1.0.5] - 2022-06-06
|
## [v2.0.0-SNAPSHOT] - 2022-05-23
|
||||||
|
|
||||||
- error message improved
|
- Porting to Secret Manager
|
||||||
|
|
||||||
|
|
|
@ -1,6 +1,6 @@
|
||||||
# ic client
|
# IC CLient
|
||||||
|
|
||||||
Client API for the Information Collector service
|
A core gCube library which empower resource discovery
|
||||||
|
|
||||||
## Built With
|
## Built With
|
||||||
|
|
||||||
|
@ -9,7 +9,6 @@ Client API for the Information Collector service
|
||||||
|
|
||||||
## Documentation
|
## Documentation
|
||||||
|
|
||||||
[SmartGears](https://wiki.gcube-system.org/gcube/ic-client)
|
|
||||||
|
|
||||||
## Change log
|
## Change log
|
||||||
|
|
||||||
|
@ -17,6 +16,7 @@ See [Releases](https://code-repo.d4science.org/gCubeSystem/ic-client/releases).
|
||||||
|
|
||||||
## Authors
|
## Authors
|
||||||
|
|
||||||
|
* **Luca Frosini** ([ORCID](https://orcid.org/0000-0003-3183-2291)) - [ISTI-CNR Infrascience Group](http://nemis.isti.cnr.it/groups/infrascience)
|
||||||
* **Lucio Lelii** - [ISTI-CNR Infrascience Group](http://nemis.isti.cnr.it/groups/infrascience)
|
* **Lucio Lelii** - [ISTI-CNR Infrascience Group](http://nemis.isti.cnr.it/groups/infrascience)
|
||||||
|
|
||||||
|
|
||||||
|
@ -29,7 +29,7 @@ Tell people how to cite this software.
|
||||||
|
|
||||||
@Manual{,
|
@Manual{,
|
||||||
title = {Common Smartgears},
|
title = {Common Smartgears},
|
||||||
author = {{Lelii, Lucio}},
|
author = {{Frosini, Luca}, {Lelii, Lucio}},
|
||||||
organization = {{ISTI - CNR}, {FAO}},
|
organization = {{ISTI - CNR}, {FAO}},
|
||||||
address = {{Pisa, Italy}, {Roma, Italy}},
|
address = {{Pisa, Italy}, {Roma, Italy}},
|
||||||
year = 2022,
|
year = 2022,
|
||||||
|
|
|
@ -0,0 +1 @@
|
||||||
|
${gcube.license}
|
|
@ -0,0 +1,65 @@
|
||||||
|
The gCube System - ${name}
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
${description}
|
||||||
|
|
||||||
|
${gcube.description}
|
||||||
|
|
||||||
|
${gcube.funding}
|
||||||
|
|
||||||
|
|
||||||
|
Version
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
${version} (${buildDate})
|
||||||
|
|
||||||
|
Please see the file named "changelog.xml" in this directory for the release notes.
|
||||||
|
|
||||||
|
|
||||||
|
Authors
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
* Fabio Simeoni (fabio.simeoni-AT-fao.org), FAO of the UN, Italy
|
||||||
|
* Lucio Lelii (lucio.lelii-AT-isti.cnr.it), CNR, Italy
|
||||||
|
|
||||||
|
Maintainers
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
* Lucio Lelii (lucio.lelii-AT-isti.cnr.it), CNR Pisa,
|
||||||
|
Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo".
|
||||||
|
* Roberto Cirillo (roberto.cirillo-AT-isti.cnr.it), CNR Pisa,
|
||||||
|
Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo".
|
||||||
|
|
||||||
|
Download information
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
Source code is available from SVN:
|
||||||
|
${scm.url}
|
||||||
|
|
||||||
|
Binaries can be downloaded from the gCube website:
|
||||||
|
${gcube.website}
|
||||||
|
|
||||||
|
|
||||||
|
Installation
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
Installation documentation is available on-line in the gCube Wiki:
|
||||||
|
${gcube.wikiRoot}
|
||||||
|
|
||||||
|
Documentation
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
Documentation is available on-line in the gCube Wiki:
|
||||||
|
${gcube.wikiRoot}
|
||||||
|
|
||||||
|
Support
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
Bugs and support requests can be reported in the gCube issue tracking tool:
|
||||||
|
${gcube.issueTracking}
|
||||||
|
|
||||||
|
|
||||||
|
Licensing
|
||||||
|
--------------------------------------------------
|
||||||
|
|
||||||
|
This software is licensed under the terms you may find in the file named "LICENSE" in this directory.
|
|
@ -0,0 +1,11 @@
|
||||||
|
<ReleaseNotes>
|
||||||
|
<Changeset component="ic-client-1.0.0" date="2013-01-11">
|
||||||
|
<Change>First Release</Change>
|
||||||
|
</Changeset>
|
||||||
|
<Changeset component="ic-client-1.0.0" date="2013-06-05">
|
||||||
|
<Change>fixed defect #1825</Change>
|
||||||
|
</Changeset>
|
||||||
|
<Changeset component="${build.finalName}" date="2016-12-13">
|
||||||
|
<Change>fixed defect #1825</Change>
|
||||||
|
</Changeset>
|
||||||
|
</ReleaseNotes>
|
|
@ -0,0 +1,31 @@
|
||||||
|
<assembly
|
||||||
|
xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0"
|
||||||
|
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
|
||||||
|
xsi:schemaLocation="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0 http://maven.apache.org/xsd/assembly-1.1.0.xsd">
|
||||||
|
<id>servicearchive</id>
|
||||||
|
<formats>
|
||||||
|
<format>tar.gz</format>
|
||||||
|
</formats>
|
||||||
|
<baseDirectory>/</baseDirectory>
|
||||||
|
<fileSets>
|
||||||
|
<fileSet>
|
||||||
|
<directory>${distroDirectory}</directory>
|
||||||
|
<outputDirectory>/</outputDirectory>
|
||||||
|
<useDefaultExcludes>true</useDefaultExcludes>
|
||||||
|
<includes>
|
||||||
|
<include>README</include>
|
||||||
|
<include>LICENSE</include>
|
||||||
|
<include>changelog.xml</include>
|
||||||
|
<include>profile.xml</include>
|
||||||
|
</includes>
|
||||||
|
<fileMode>755</fileMode>
|
||||||
|
<filtered>true</filtered>
|
||||||
|
</fileSet>
|
||||||
|
</fileSets>
|
||||||
|
<files>
|
||||||
|
<file>
|
||||||
|
<source>target/${build.finalName}.jar</source>
|
||||||
|
<outputDirectory>/${artifactId}</outputDirectory>
|
||||||
|
</file>
|
||||||
|
</files>
|
||||||
|
</assembly>
|
|
@ -0,0 +1,26 @@
|
||||||
|
<?xml version="1.0" encoding="UTF-8"?>
|
||||||
|
<Resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
|
||||||
|
<ID />
|
||||||
|
<Type>Service</Type>
|
||||||
|
<Profile>
|
||||||
|
<Description>${description}</Description>
|
||||||
|
<Class>InformationSystem</Class>
|
||||||
|
<Name>${artifactId}</Name>
|
||||||
|
<Version>1.0.0</Version>
|
||||||
|
<Packages>
|
||||||
|
<Software>
|
||||||
|
<Name>${artifactId}</Name>
|
||||||
|
<Version>${version}</Version>
|
||||||
|
<MavenCoordinates>
|
||||||
|
<groupId>${groupId}</groupId>
|
||||||
|
<artifactId>${artifactId}</artifactId>
|
||||||
|
<version>${version}</version>
|
||||||
|
</MavenCoordinates>
|
||||||
|
<Files>
|
||||||
|
<File>${build.finalName}.jar</File>
|
||||||
|
</Files>
|
||||||
|
</Software>
|
||||||
|
</Packages>
|
||||||
|
</Profile>
|
||||||
|
</Resource>
|
||||||
|
|
54
pom.xml
54
pom.xml
|
@ -5,40 +5,35 @@
|
||||||
<parent>
|
<parent>
|
||||||
<groupId>org.gcube.tools</groupId>
|
<groupId>org.gcube.tools</groupId>
|
||||||
<artifactId>maven-parent</artifactId>
|
<artifactId>maven-parent</artifactId>
|
||||||
<version>1.1.0</version>
|
<version>1.2.0</version>
|
||||||
</parent>
|
</parent>
|
||||||
<groupId>org.gcube.resources.discovery</groupId>
|
<groupId>org.gcube.resources.discovery</groupId>
|
||||||
<artifactId>ic-client</artifactId>
|
<artifactId>ic-client</artifactId>
|
||||||
<version>1.0.5</version>
|
<version>2.0.0-SNAPSHOT</version>
|
||||||
<name>Information Collector Client</name>
|
<name>Information Collector Client</name>
|
||||||
<description>Client API for the Information Collector service</description>
|
<description>Client API for the Information Collector service</description>
|
||||||
<scm>
|
<scm>
|
||||||
<connection>scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</connection>
|
<connection>
|
||||||
<developerConnection>scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</developerConnection>
|
scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</connection>
|
||||||
|
<developerConnection>
|
||||||
|
scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</developerConnection>
|
||||||
<url>https://code-repo.d4science.org/gCubeSystem/${project.artifactId}</url>
|
<url>https://code-repo.d4science.org/gCubeSystem/${project.artifactId}</url>
|
||||||
</scm>
|
</scm>
|
||||||
|
<properties>
|
||||||
|
<distroDirectory>distro</distroDirectory>
|
||||||
|
</properties>
|
||||||
<dependencyManagement>
|
<dependencyManagement>
|
||||||
<dependencies>
|
<dependencies>
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>org.gcube.distribution</groupId>
|
<groupId>org.gcube.distribution</groupId>
|
||||||
<artifactId>gcube-bom</artifactId>
|
<artifactId>gcube-bom</artifactId>
|
||||||
<version>2.3.0</version>
|
<version>3.0.1-SNAPSHOT</version>
|
||||||
<type>pom</type>
|
<type>pom</type>
|
||||||
<scope>import</scope>
|
<scope>import</scope>
|
||||||
</dependency>
|
</dependency>
|
||||||
</dependencies>
|
</dependencies>
|
||||||
</dependencyManagement>
|
</dependencyManagement>
|
||||||
|
|
||||||
<dependencies>
|
<dependencies>
|
||||||
<dependency>
|
|
||||||
<groupId>org.gcube.common</groupId>
|
|
||||||
<artifactId>authorization-client</artifactId>
|
|
||||||
</dependency>
|
|
||||||
<dependency>
|
|
||||||
<groupId>org.gcube.core</groupId>
|
|
||||||
<artifactId>common-scope</artifactId>
|
|
||||||
</dependency>
|
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>org.gcube.resources.discovery</groupId>
|
<groupId>org.gcube.resources.discovery</groupId>
|
||||||
<artifactId>discovery-client</artifactId>
|
<artifactId>discovery-client</artifactId>
|
||||||
|
@ -51,10 +46,39 @@
|
||||||
<groupId>org.gcube.core</groupId>
|
<groupId>org.gcube.core</groupId>
|
||||||
<artifactId>common-gcore-stubs</artifactId>
|
<artifactId>common-gcore-stubs</artifactId>
|
||||||
</dependency>
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>org.gcube.core</groupId>
|
||||||
|
<artifactId>common-scope</artifactId>
|
||||||
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>org.gcube.common</groupId>
|
||||||
|
<artifactId>common-security</artifactId>
|
||||||
|
</dependency>
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>org.slf4j</groupId>
|
<groupId>org.slf4j</groupId>
|
||||||
<artifactId>slf4j-api</artifactId>
|
<artifactId>slf4j-api</artifactId>
|
||||||
</dependency>
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>jakarta.xml.bind</groupId>
|
||||||
|
<artifactId>jakarta.xml.bind-api</artifactId>
|
||||||
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>jakarta.xml.ws</groupId>
|
||||||
|
<artifactId>jakarta.xml.ws-api</artifactId>
|
||||||
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>com.sun.xml.ws</groupId>
|
||||||
|
<artifactId>jaxws-rt</artifactId>
|
||||||
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>org.gcube.core</groupId>
|
||||||
|
<artifactId>common-scope-maps</artifactId>
|
||||||
|
<scope>compile</scope>
|
||||||
|
</dependency>
|
||||||
|
<dependency>
|
||||||
|
<groupId>com.sun.xml.bind</groupId>
|
||||||
|
<artifactId>jaxb-impl</artifactId>
|
||||||
|
</dependency>
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>org.slf4j</groupId>
|
<groupId>org.slf4j</groupId>
|
||||||
<artifactId>slf4j-simple</artifactId>
|
<artifactId>slf4j-simple</artifactId>
|
||||||
|
|
|
@ -1,7 +1,5 @@
|
||||||
package org.gcube.resources.discovery.icclient;
|
package org.gcube.resources.discovery.icclient;
|
||||||
|
|
||||||
import static org.gcube.common.scope.impl.ScopeBean.Type.VRE;
|
|
||||||
|
|
||||||
import java.util.ArrayList;
|
import java.util.ArrayList;
|
||||||
import java.util.HashMap;
|
import java.util.HashMap;
|
||||||
import java.util.List;
|
import java.util.List;
|
||||||
|
@ -9,8 +7,9 @@ import java.util.Map.Entry;
|
||||||
import java.util.regex.Matcher;
|
import java.util.regex.Matcher;
|
||||||
import java.util.regex.Pattern;
|
import java.util.regex.Pattern;
|
||||||
|
|
||||||
import org.gcube.common.scope.api.ScopeProvider;
|
import org.gcube.common.security.ContextBean;
|
||||||
import org.gcube.common.scope.impl.ScopeBean;
|
import org.gcube.common.security.ContextBean.Type;
|
||||||
|
import org.gcube.common.security.providers.SecretManagerProvider;
|
||||||
import org.gcube.resources.discovery.icclient.stubs.MalformedQueryException;
|
import org.gcube.resources.discovery.icclient.stubs.MalformedQueryException;
|
||||||
import org.slf4j.Logger;
|
import org.slf4j.Logger;
|
||||||
import org.slf4j.LoggerFactory;
|
import org.slf4j.LoggerFactory;
|
||||||
|
@ -24,8 +23,9 @@ public class Helper {
|
||||||
public static String queryAddAuthenticationControl(String expression) throws MalformedQueryException
|
public static String queryAddAuthenticationControl(String expression) throws MalformedQueryException
|
||||||
{
|
{
|
||||||
|
|
||||||
String context = ScopeProvider.instance.get();
|
String scope = SecretManagerProvider.get().getContext();
|
||||||
if (context==null || !new ScopeBean(context).is(VRE))
|
|
||||||
|
if (scope==null || !new ContextBean(scope).is(Type.VRE))
|
||||||
return expression;
|
return expression;
|
||||||
|
|
||||||
int wherePathIndex=0;
|
int wherePathIndex=0;
|
||||||
|
@ -40,9 +40,10 @@ public class Helper {
|
||||||
HashMap<String, String> varReplacementMap = new HashMap<String, String>();
|
HashMap<String, String> varReplacementMap = new HashMap<String, String>();
|
||||||
|
|
||||||
|
|
||||||
|
String forPropertiesString=" *VAR* in *COLLECTION*/Data "; ///child::*[local-name()='Scope']
|
||||||
String forString=" *VAR* in *COLLECTION*/Scopes ";
|
String forString=" *VAR* in *COLLECTION*/Scopes ";
|
||||||
String authString=" (functx:is-value-in-sequence('"+context+"',*VAR*/child::*[local-name()='Scope']/text()) or functx:is-value-in-sequence('"+context.substring(0,context.lastIndexOf("/"))+"',*VAR*/child::*[local-name()='Scope']/text())) ";
|
String authString=" (functx:is-value-in-sequence('"+scope+"',*VAR*/child::*[local-name()='Scope']/text()) or functx:is-value-in-sequence('"+scope.substring(0,scope.lastIndexOf("/"))+"',*VAR*/child::*[local-name()='Scope']/text())) ";
|
||||||
String authStringNormal=" (functx:is-value-in-sequence('"+context+"',*VAR*/child::*[local-name()='Scope']/text())) ";
|
String authStringNormal=" (functx:is-value-in-sequence('"+scope+"',*VAR*/child::*[local-name()='Scope']/text())) ";
|
||||||
|
|
||||||
String queryFiltered;
|
String queryFiltered;
|
||||||
List<Boolean> collInsert= new ArrayList<Boolean>();
|
List<Boolean> collInsert= new ArrayList<Boolean>();
|
||||||
|
@ -55,6 +56,7 @@ public class Helper {
|
||||||
Pattern collectionPattern= Pattern.compile("[^\\s]*\\s*in\\s*collection\\s*[^\\s,]*");
|
Pattern collectionPattern= Pattern.compile("[^\\s]*\\s*in\\s*collection\\s*[^\\s,]*");
|
||||||
Pattern varPattern= Pattern.compile("[^\\s]*");
|
Pattern varPattern= Pattern.compile("[^\\s]*");
|
||||||
Pattern resourcePattern= Pattern.compile("\\scollection\\s*\\([^\\)]*.*/Resource", Pattern.DOTALL);
|
Pattern resourcePattern= Pattern.compile("\\scollection\\s*\\([^\\)]*.*/Resource", Pattern.DOTALL);
|
||||||
|
Pattern propertiesPattern=Pattern.compile("\\scollection\\s*\\([^\\)]*.*/Document", Pattern.DOTALL);
|
||||||
Matcher varMat;
|
Matcher varMat;
|
||||||
Matcher resourceMat;
|
Matcher resourceMat;
|
||||||
Matcher collMat=collectionPattern.matcher(expression);
|
Matcher collMat=collectionPattern.matcher(expression);
|
||||||
|
@ -71,19 +73,38 @@ public class Helper {
|
||||||
log.warn("error parsing collection statement");
|
log.warn("error parsing collection statement");
|
||||||
}
|
}
|
||||||
varMat= varPattern.matcher(temp);
|
varMat= varPattern.matcher(temp);
|
||||||
resourceMat=resourcePattern.matcher(temp);
|
boolean propBool=false;
|
||||||
|
if (temp.contains("/Properties"))
|
||||||
|
{
|
||||||
|
resourceMat= propertiesPattern.matcher(temp);
|
||||||
|
propBool=true;
|
||||||
|
}
|
||||||
|
else resourceMat=resourcePattern.matcher(temp);
|
||||||
varMat.lookingAt();
|
varMat.lookingAt();
|
||||||
resourceMat.find();
|
resourceMat.find();
|
||||||
String tempPath="";
|
String tempPath="";
|
||||||
try{
|
try{
|
||||||
tempPath= temp.substring(resourceMat.end());
|
tempPath= temp.substring(resourceMat.end());
|
||||||
String resourceMatString= resourceMat.group();
|
|
||||||
String oldVar = varMat.group();
|
|
||||||
String newVar = "$entry"+collInsert.size()+"ValueAuth";
|
|
||||||
forStringTemp=forString.replace("*VAR*",newVar ).replace("*COLLECTION*",resourceMatString );
|
|
||||||
collInsert.add(resourceMatString.contains("/Profiles/RunningInstance") || resourceMatString.contains("/Profiles/GHN") || resourceMatString.contains("/Profiles/Service"));
|
|
||||||
varReplacementMap.put(oldVar, newVar+"/.."+tempPath);
|
|
||||||
|
|
||||||
|
if (propBool)
|
||||||
|
{
|
||||||
|
String resourceMatString= resourceMat.group();
|
||||||
|
forStringTemp=forPropertiesString.replace("*VAR*","$entry"+collInsert.size()+"ValueAuth" ).replace("*COLLECTION*", resourceMatString );
|
||||||
|
String oldVar = varMat.group();
|
||||||
|
String newVar = "$entry"+collInsert.size()+"ValueAuth";
|
||||||
|
collInsert.add(true);
|
||||||
|
|
||||||
|
varReplacementMap.put(oldVar, newVar+"/.."+tempPath);
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
String resourceMatString= resourceMat.group();
|
||||||
|
String oldVar = varMat.group();
|
||||||
|
String newVar = "$entry"+collInsert.size()+"ValueAuth";
|
||||||
|
forStringTemp=forString.replace("*VAR*",newVar ).replace("*COLLECTION*",resourceMatString );
|
||||||
|
collInsert.add(resourceMatString.contains("/Profiles/RunningInstance") || resourceMatString.contains("/Profiles/GHN") || resourceMatString.contains("/Profiles/Service"));
|
||||||
|
varReplacementMap.put(oldVar, newVar+"/.."+tempPath);
|
||||||
|
}
|
||||||
}catch(IllegalStateException e){ log.debug("error parsing statement");}
|
}catch(IllegalStateException e){ log.debug("error parsing statement");}
|
||||||
expression=expression.substring(0, collIndexStart)+ forStringTemp +expression.substring(collIndexEnd);
|
expression=expression.substring(0, collIndexStart)+ forStringTemp +expression.substring(collIndexEnd);
|
||||||
collMat=collectionPattern.matcher(expression);
|
collMat=collectionPattern.matcher(expression);
|
||||||
|
@ -176,6 +197,7 @@ public class Helper {
|
||||||
queryFiltered = queryFiltered.replaceAll("text\\(\\) ne ","text() != ");
|
queryFiltered = queryFiltered.replaceAll("text\\(\\) ne ","text() != ");
|
||||||
|
|
||||||
log.info("submitting filtered query: {}",queryFiltered);
|
log.info("submitting filtered query: {}",queryFiltered);
|
||||||
|
|
||||||
|
|
||||||
return queryFiltered;
|
return queryFiltered;
|
||||||
}
|
}
|
||||||
|
|
|
@ -7,100 +7,89 @@ import static org.gcube.resources.discovery.icclient.stubs.CollectorConstants.lo
|
||||||
import java.net.URI;
|
import java.net.URI;
|
||||||
import java.util.ArrayList;
|
import java.util.ArrayList;
|
||||||
import java.util.List;
|
import java.util.List;
|
||||||
|
import java.util.Objects;
|
||||||
import java.util.regex.Matcher;
|
import java.util.regex.Matcher;
|
||||||
import java.util.regex.Pattern;
|
import java.util.regex.Pattern;
|
||||||
|
|
||||||
import javax.xml.ws.soap.SOAPFaultException;
|
|
||||||
|
|
||||||
import org.gcube.common.clients.stubs.jaxws.JAXWSUtils;
|
import org.gcube.common.clients.stubs.jaxws.JAXWSUtils;
|
||||||
import org.gcube.common.scope.api.ServiceMap;
|
import org.gcube.common.scope.api.ServiceMap;
|
||||||
|
import org.gcube.common.security.providers.SecretManagerProvider;
|
||||||
import org.gcube.resources.discovery.client.api.DiscoveryClient;
|
import org.gcube.resources.discovery.client.api.DiscoveryClient;
|
||||||
import org.gcube.resources.discovery.client.api.DiscoveryException;
|
import org.gcube.resources.discovery.client.api.DiscoveryException;
|
||||||
import org.gcube.resources.discovery.client.queries.api.Query;
|
import org.gcube.resources.discovery.client.queries.api.Query;
|
||||||
import org.gcube.resources.discovery.icclient.stubs.CollectorStub;
|
import org.gcube.resources.discovery.icclient.stubs.CollectorStub;
|
||||||
import org.gcube.resources.discovery.icclient.stubs.CollectorStubRestImpl;
|
|
||||||
import org.gcube.resources.discovery.icclient.stubs.MalformedQueryException;
|
import org.gcube.resources.discovery.icclient.stubs.MalformedQueryException;
|
||||||
import org.slf4j.Logger;
|
import org.slf4j.Logger;
|
||||||
import org.slf4j.LoggerFactory;
|
import org.slf4j.LoggerFactory;
|
||||||
|
|
||||||
|
import jakarta.xml.ws.soap.SOAPFaultException;
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* An {@link DiscoveryClient} that submits queries to the Information Collector, without parsing the results.
|
* An {@link DiscoveryClient} that submits queries to the Information Collector, without parsing the results.
|
||||||
*
|
*
|
||||||
|
* @deprecated D4Science using User Resource Registry instead of the old Information System
|
||||||
|
* @see <a href="https://wiki.gcube-system.org/gcube/Resource_Registry_Service_-_Query_%26_Access">Resource Registry Client</a>
|
||||||
*/
|
*/
|
||||||
|
@Deprecated
|
||||||
public class ICClient implements DiscoveryClient<String> {
|
public class ICClient implements DiscoveryClient<String> {
|
||||||
|
|
||||||
private static final Logger log = LoggerFactory.getLogger(ICClient.class);
|
private static final Logger log = LoggerFactory.getLogger(ICClient.class);
|
||||||
|
|
||||||
//result split pattern
|
//result split pattern
|
||||||
private static final Pattern pattern = Pattern.compile("<Record>(.*?)</Record>", Pattern.DOTALL);
|
private static final Pattern pattern = Pattern.compile("<Record>(.*?)</Record>", Pattern.DOTALL);
|
||||||
|
|
||||||
|
|
||||||
public List<String> submit(Query query) throws DiscoveryException {
|
public List<String> submit(Query query) throws DiscoveryException {
|
||||||
|
Objects.requireNonNull(SecretManagerProvider.get());
|
||||||
try {
|
try {
|
||||||
CollectorStub stub = getStub();
|
CollectorStub stub = getStub();
|
||||||
String results = callService(query, stub);
|
String results = callService(query, stub);
|
||||||
return splitIntoList(results);
|
return splitIntoList(results);
|
||||||
}
|
}
|
||||||
catch(MalformedQueryException e) {
|
catch(MalformedQueryException e) {
|
||||||
throw new DiscoveryException("malformed query "+query.expression(),e);
|
throw new DiscoveryException("malformed query {} "+query.expression(),e);
|
||||||
}
|
}
|
||||||
catch(SOAPFaultException e) {
|
catch(SOAPFaultException e) {
|
||||||
throw new RuntimeException(JAXWSUtils.remoteCause(e));
|
throw new RuntimeException(JAXWSUtils.remoteCause(e));
|
||||||
}
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
//helper
|
//helper
|
||||||
private String callService(Query query, CollectorStub stub) {
|
private String callService(Query query, CollectorStub stub) {
|
||||||
|
|
||||||
String expression = query.expression();
|
String expression = query.expression();
|
||||||
|
|
||||||
log.info("executing query {}",expression);
|
log.info("executing query {}",expression);
|
||||||
|
|
||||||
long time = System.currentTimeMillis();
|
long time = System.currentTimeMillis();
|
||||||
|
|
||||||
String submittedExpression = Helper.queryAddAuthenticationControl(expression);
|
String submittedExpression = Helper.queryAddAuthenticationControl(expression);
|
||||||
|
|
||||||
String response = stub.execute(submittedExpression);
|
String response = stub.execute(submittedExpression);
|
||||||
|
|
||||||
log.info("executed query {} in {} ms",expression,System.currentTimeMillis()-time);
|
log.info("executed query {} in {} ms",expression,System.currentTimeMillis()-time);
|
||||||
|
|
||||||
return response;
|
return response;
|
||||||
}
|
}
|
||||||
|
|
||||||
//helper
|
//helper
|
||||||
private CollectorStub getStub() {
|
private CollectorStub getStub() {
|
||||||
/*
|
|
||||||
ServiceMap serviceMap = null;
|
|
||||||
|
|
||||||
if (SecurityTokenProvider.instance.get()!=null) {
|
|
||||||
try {
|
|
||||||
AuthorizationEntry entry = authorizationService().get(SecurityTokenProvider.instance.get());
|
|
||||||
serviceMap = entry.getMap();
|
|
||||||
if (serviceMap==null) ScopeProvider.instance.set(entry.getContext());
|
|
||||||
} catch (Throwable e) {
|
|
||||||
throw new IllegalArgumentException(e);
|
|
||||||
}
|
|
||||||
}*/
|
|
||||||
|
|
||||||
ServiceMap serviceMap = ServiceMap.instance;
|
|
||||||
String address = serviceMap.endpoint(localname);
|
|
||||||
log.info("connecting to {}",address);
|
|
||||||
if (serviceMap.version().equals("2.0.0"))
|
|
||||||
return new CollectorStubRestImpl(address);
|
|
||||||
else
|
|
||||||
return stubFor(collector).at(URI.create(address));
|
|
||||||
|
|
||||||
|
//find endpoint address in service map currently in scope
|
||||||
|
String address = ServiceMap.instance.endpoint(localname);
|
||||||
|
log.info("connectinfg to {} ",address);
|
||||||
|
//obtain a JAXWS stub configured for gCube calls
|
||||||
|
return stubFor(collector).at(URI.create(address));
|
||||||
}
|
}
|
||||||
|
|
||||||
//helper
|
//helper
|
||||||
private List<String> splitIntoList(String response) {
|
private List<String> splitIntoList(String response) {
|
||||||
|
|
||||||
List<String> results = new ArrayList<String>();
|
List<String> results = new ArrayList<String>();
|
||||||
|
|
||||||
Matcher m = pattern.matcher(response);
|
Matcher m = pattern.matcher(response);
|
||||||
|
|
||||||
while (m.find())
|
while (m.find())
|
||||||
results.add(m.group(1).trim());
|
results.add(m.group(1).trim());
|
||||||
|
|
||||||
|
|
|
@ -9,7 +9,6 @@ import java.util.Map;
|
||||||
import org.gcube.common.resources.gcore.GCoreEndpoint;
|
import org.gcube.common.resources.gcore.GCoreEndpoint;
|
||||||
import org.gcube.common.resources.gcore.GenericResource;
|
import org.gcube.common.resources.gcore.GenericResource;
|
||||||
import org.gcube.common.resources.gcore.HostingNode;
|
import org.gcube.common.resources.gcore.HostingNode;
|
||||||
import org.gcube.common.resources.gcore.Resource;
|
|
||||||
import org.gcube.common.resources.gcore.ServiceEndpoint;
|
import org.gcube.common.resources.gcore.ServiceEndpoint;
|
||||||
import org.gcube.common.resources.gcore.ServiceInstance;
|
import org.gcube.common.resources.gcore.ServiceInstance;
|
||||||
import org.gcube.common.resources.gcore.Software;
|
import org.gcube.common.resources.gcore.Software;
|
||||||
|
@ -18,19 +17,19 @@ import org.gcube.resources.discovery.client.api.ResultParser;
|
||||||
import org.gcube.resources.discovery.client.impl.DelegateClient;
|
import org.gcube.resources.discovery.client.impl.DelegateClient;
|
||||||
import org.gcube.resources.discovery.client.impl.JAXBParser;
|
import org.gcube.resources.discovery.client.impl.JAXBParser;
|
||||||
import org.gcube.resources.discovery.client.queries.impl.XQuery;
|
import org.gcube.resources.discovery.client.queries.impl.XQuery;
|
||||||
import org.slf4j.Logger;
|
|
||||||
import org.slf4j.LoggerFactory;
|
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* Factory of {@link XQuery}s and {@link DiscoveryClient}s for the Information Collector service.
|
* Factory of {@link XQuery}s and {@link DiscoveryClient}s for the Information Collector service.
|
||||||
*
|
*
|
||||||
|
* @deprecated D4Science using User Resource Registry instead of the old Information System
|
||||||
|
* @see <a href="https://wiki.gcube-system.org/gcube/Resource_Registry_Service_-_Query_%26_Access">Resource Registry Client</a>
|
||||||
|
*
|
||||||
* @author Fabio Simeoni
|
* @author Fabio Simeoni
|
||||||
*
|
*
|
||||||
*/
|
*/
|
||||||
|
@Deprecated
|
||||||
public class ICFactory {
|
public class ICFactory {
|
||||||
|
|
||||||
private static Logger logger = LoggerFactory.getLogger(ICFactory.class);
|
|
||||||
|
|
||||||
// known query parameters, indexed by resource type
|
// known query parameters, indexed by resource type
|
||||||
private static Map<Class<?>, Map<String, String>> registry = new HashMap<Class<?>, Map<String, String>>();
|
private static Map<Class<?>, Map<String, String>> registry = new HashMap<Class<?>, Map<String, String>>();
|
||||||
|
|
||||||
|
@ -43,9 +42,7 @@ public class ICFactory {
|
||||||
|
|
||||||
// registers parameters for known queries
|
// registers parameters for known queries
|
||||||
static {
|
static {
|
||||||
|
|
||||||
register(Resource.class,
|
|
||||||
params().add(ns, nsDeclaration).add(range, format(profile_range, "")).build());
|
|
||||||
register(GenericResource.class,
|
register(GenericResource.class,
|
||||||
params().add(ns, nsDeclaration).add(range, format(profile_range, "GenericResource")).build());
|
params().add(ns, nsDeclaration).add(range, format(profile_range, "GenericResource")).build());
|
||||||
register(ServiceEndpoint.class,
|
register(ServiceEndpoint.class,
|
||||||
|
@ -92,7 +89,7 @@ public class ICFactory {
|
||||||
* @return the client
|
* @return the client
|
||||||
*/
|
*/
|
||||||
public static <R> DiscoveryClient<R> clientFor(Class<R> type) {
|
public static <R> DiscoveryClient<R> clientFor(Class<R> type) {
|
||||||
return new DelegateClient<R>(new JAXBParser<R>(type), client());
|
return new DelegateClient<R>(new JAXBParser<R>(type), new ICClient());
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
@ -102,15 +99,7 @@ public class ICFactory {
|
||||||
* @return the client
|
* @return the client
|
||||||
*/
|
*/
|
||||||
public static DiscoveryClient<String> client() {
|
public static DiscoveryClient<String> client() {
|
||||||
try {
|
return new ICClient();
|
||||||
@SuppressWarnings("unchecked")
|
|
||||||
Class<? extends DiscoveryClient<String>> localClientclass =(Class<? extends DiscoveryClient<String>>) Class.forName("org.gcube.informationsystem.collector.client.LocalDiscoveryClient", true, Thread.currentThread().getContextClassLoader());
|
|
||||||
logger.info("using LocalDiscoveryClient");
|
|
||||||
return localClientclass.newInstance();
|
|
||||||
} catch (ClassNotFoundException | IllegalAccessException | InstantiationException e) {
|
|
||||||
return new ICClient();
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
@ -121,7 +110,7 @@ public class ICFactory {
|
||||||
* @return the client
|
* @return the client
|
||||||
*/
|
*/
|
||||||
public static <R> DiscoveryClient<R> clientWith(ResultParser<R> parser) {
|
public static <R> DiscoveryClient<R> clientWith(ResultParser<R> parser) {
|
||||||
return new DelegateClient<R>(parser, client());
|
return new DelegateClient<R>(parser, new ICClient());
|
||||||
}
|
}
|
||||||
|
|
||||||
// utils
|
// utils
|
||||||
|
|
|
@ -1,12 +1,14 @@
|
||||||
package org.gcube.resources.discovery.icclient.stubs;
|
package org.gcube.resources.discovery.icclient.stubs;
|
||||||
|
|
||||||
import static org.gcube.resources.discovery.icclient.stubs.CollectorConstants.*;
|
import static org.gcube.resources.discovery.icclient.stubs.CollectorConstants.portType;
|
||||||
|
import static org.gcube.resources.discovery.icclient.stubs.CollectorConstants.target_namespace;
|
||||||
|
|
||||||
|
import jakarta.jws.WebMethod;
|
||||||
|
import jakarta.jws.WebParam;
|
||||||
|
import jakarta.jws.WebResult;
|
||||||
|
import jakarta.jws.WebService;
|
||||||
|
import jakarta.xml.ws.soap.SOAPFaultException;
|
||||||
|
|
||||||
import javax.jws.WebMethod;
|
|
||||||
import javax.jws.WebParam;
|
|
||||||
import javax.jws.WebResult;
|
|
||||||
import javax.jws.WebService;
|
|
||||||
import javax.xml.ws.soap.SOAPFaultException;
|
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* A local interface to the resource discovery service.
|
* A local interface to the resource discovery service.
|
||||||
|
|
|
@ -1,85 +0,0 @@
|
||||||
package org.gcube.resources.discovery.icclient.stubs;
|
|
||||||
|
|
||||||
import java.io.BufferedReader;
|
|
||||||
import java.io.InputStream;
|
|
||||||
import java.io.InputStreamReader;
|
|
||||||
import java.net.HttpURLConnection;
|
|
||||||
import java.net.URL;
|
|
||||||
import java.net.URLEncoder;
|
|
||||||
import java.nio.charset.StandardCharsets;
|
|
||||||
|
|
||||||
import javax.net.ssl.HttpsURLConnection;
|
|
||||||
|
|
||||||
import org.gcube.common.authorization.library.provider.SecurityTokenProvider;
|
|
||||||
import org.gcube.common.scope.api.ScopeProvider;
|
|
||||||
import org.slf4j.Logger;
|
|
||||||
import org.slf4j.LoggerFactory;
|
|
||||||
|
|
||||||
public class CollectorStubRestImpl implements CollectorStub {
|
|
||||||
|
|
||||||
private static Logger log = LoggerFactory.getLogger(CollectorStubRestImpl.class);
|
|
||||||
|
|
||||||
public static final String TOKEN_HEADER_ENTRY = "gcube-token";
|
|
||||||
public static final String SCOPE_HEADER_ENTRY = "gcube-scope";
|
|
||||||
private String endopoint;
|
|
||||||
|
|
||||||
|
|
||||||
public CollectorStubRestImpl(String endopoint) {
|
|
||||||
super();
|
|
||||||
this.endopoint = endopoint;
|
|
||||||
}
|
|
||||||
|
|
||||||
@Override
|
|
||||||
public String execute(String query) throws MalformedQueryException {
|
|
||||||
//final String methodPath = "/search/";
|
|
||||||
final String queryParameter = "query";
|
|
||||||
|
|
||||||
try {
|
|
||||||
StringBuilder callUrl = new StringBuilder(endopoint).append("?").append(queryParameter).append("=").append(URLEncoder.encode(query, StandardCharsets.UTF_8.toString()));
|
|
||||||
URL url = new URL(callUrl.toString());
|
|
||||||
HttpURLConnection connection = makeRequest(url, "GET", false);
|
|
||||||
connection.setDoInput(true);
|
|
||||||
if (connection.getResponseCode()!=200){
|
|
||||||
try(BufferedReader reader = new BufferedReader(new InputStreamReader((InputStream)connection.getErrorStream()))){
|
|
||||||
StringBuilder error = new StringBuilder();
|
|
||||||
String line;
|
|
||||||
while((line = reader.readLine()) != null)
|
|
||||||
error.append(line);
|
|
||||||
throw new Exception("error executing query: "+error.toString());
|
|
||||||
}
|
|
||||||
|
|
||||||
} else {
|
|
||||||
String toReturn;
|
|
||||||
try(BufferedReader reader = new BufferedReader(new InputStreamReader((InputStream)connection.getContent()))){
|
|
||||||
StringBuilder result = new StringBuilder();
|
|
||||||
String line;
|
|
||||||
while((line = reader.readLine()) != null)
|
|
||||||
result.append(line);
|
|
||||||
toReturn = result.toString();
|
|
||||||
}
|
|
||||||
return toReturn;
|
|
||||||
}
|
|
||||||
}catch (Exception e) {
|
|
||||||
log.error("error executing query",e);
|
|
||||||
throw new MalformedQueryException(e.getMessage());
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
private HttpURLConnection makeRequest(URL url, String method, boolean includeTokenInHeader) throws Exception{
|
|
||||||
HttpURLConnection connection;
|
|
||||||
if (url.toString().startsWith("https://"))
|
|
||||||
connection = (HttpsURLConnection)url.openConnection();
|
|
||||||
else connection = (HttpURLConnection)url.openConnection();
|
|
||||||
|
|
||||||
if (includeTokenInHeader){
|
|
||||||
if (SecurityTokenProvider.instance.get()==null) throw new RuntimeException("null token passed");
|
|
||||||
connection.setRequestProperty(TOKEN_HEADER_ENTRY,SecurityTokenProvider.instance.get());
|
|
||||||
} else {
|
|
||||||
if (ScopeProvider.instance.get()==null) throw new RuntimeException("null scope passed");
|
|
||||||
connection.setRequestProperty(SCOPE_HEADER_ENTRY,ScopeProvider.instance.get());
|
|
||||||
}
|
|
||||||
connection.setRequestMethod(method);
|
|
||||||
return connection;
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
|
@ -1,6 +1,6 @@
|
||||||
package org.gcube.resources.discovery.icclient.stubs;
|
package org.gcube.resources.discovery.icclient.stubs;
|
||||||
|
|
||||||
import javax.xml.ws.WebFault;
|
import jakarta.xml.ws.WebFault;
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* Thrown by {@link CollectorStub#execute(String)} when the query cannot be submitted to the Information Collector
|
* Thrown by {@link CollectorStub#execute(String)} when the query cannot be submitted to the Information Collector
|
||||||
|
|
|
@ -1,289 +0,0 @@
|
||||||
package org.acme;
|
|
||||||
|
|
||||||
import static java.lang.String.format;
|
|
||||||
import static org.gcube.resources.discovery.icclient.ICFactory.client;
|
|
||||||
import static org.gcube.resources.discovery.icclient.ICFactory.clientFor;
|
|
||||||
import static org.gcube.resources.discovery.icclient.ICFactory.queryFor;
|
|
||||||
|
|
||||||
import java.io.StringReader;
|
|
||||||
import java.net.URI;
|
|
||||||
import java.util.List;
|
|
||||||
|
|
||||||
import javax.xml.bind.annotation.XmlElement;
|
|
||||||
import javax.xml.bind.annotation.XmlElementRef;
|
|
||||||
import javax.xml.bind.annotation.XmlRootElement;
|
|
||||||
|
|
||||||
import org.gcube.common.authorization.library.provider.SecurityTokenProvider;
|
|
||||||
import org.gcube.common.resources.gcore.GCoreEndpoint;
|
|
||||||
import org.gcube.common.resources.gcore.GenericResource;
|
|
||||||
import org.gcube.common.resources.gcore.HostingNode;
|
|
||||||
import org.gcube.common.resources.gcore.Resource;
|
|
||||||
import org.gcube.common.resources.gcore.Resources;
|
|
||||||
import org.gcube.common.resources.gcore.ServiceEndpoint;
|
|
||||||
import org.gcube.common.resources.gcore.ServiceEndpoint.AccessPoint;
|
|
||||||
import org.gcube.common.resources.gcore.ServiceInstance;
|
|
||||||
import org.gcube.common.resources.gcore.Software;
|
|
||||||
import org.gcube.common.scope.api.ScopeProvider;
|
|
||||||
import org.gcube.resources.discovery.client.api.DiscoveryClient;
|
|
||||||
import org.gcube.resources.discovery.client.api.ResultParser;
|
|
||||||
import org.gcube.resources.discovery.client.queries.api.Query;
|
|
||||||
import org.gcube.resources.discovery.client.queries.api.SimpleQuery;
|
|
||||||
import org.gcube.resources.discovery.client.queries.impl.XQuery;
|
|
||||||
import org.gcube.resources.discovery.icclient.ICFactory;
|
|
||||||
import org.junit.BeforeClass;
|
|
||||||
import org.junit.Test;
|
|
||||||
|
|
||||||
public class APIClient {
|
|
||||||
|
|
||||||
@BeforeClass
|
|
||||||
public static void setup() {
|
|
||||||
|
|
||||||
ScopeProvider.instance.set("/gcube/devNext");
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void allServiceEndpoints() {
|
|
||||||
|
|
||||||
|
|
||||||
//pick a predefined query
|
|
||||||
Query query = queryFor(ServiceEndpoint.class);
|
|
||||||
|
|
||||||
//pick a client that knows how to parse those resources
|
|
||||||
DiscoveryClient<ServiceEndpoint> client = clientFor(ServiceEndpoint.class);
|
|
||||||
|
|
||||||
//execute query in current scope
|
|
||||||
List<ServiceEndpoint> resources = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(resources);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void testThredds() throws Exception{
|
|
||||||
//ScopeProvider.instance.set("/gcube/devNext/NextNext");
|
|
||||||
SecurityTokenProvider.instance.set("52b59669-ccde-46d2-a4da-108b9e941f7c-98187548");
|
|
||||||
SimpleQuery query = queryFor(GCoreEndpoint.class);
|
|
||||||
query.addCondition("$resource/Profile/ServiceClass/string() eq 'DataAccess' ");
|
|
||||||
query.setResult("$resource/Profile/ServiceName/text()");
|
|
||||||
DiscoveryClient<String> client = client();
|
|
||||||
List<String> resources = client.submit(query);
|
|
||||||
if (resources==null || resources.size()==0){
|
|
||||||
throw new Exception("No resource named StatisticalManagerAlgorithm available in scope ");
|
|
||||||
}
|
|
||||||
|
|
||||||
System.out.println("found resources "+resources.size());
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceEndpoints() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceEndpoint.class);
|
|
||||||
query.addCondition("$resource/Profile/Category/text() eq 'Database'");
|
|
||||||
query.setResult("$resource/Profile/AccessPoint/Interface/Endpoint/text()");
|
|
||||||
|
|
||||||
DiscoveryClient<String> client = client();
|
|
||||||
|
|
||||||
List<String> resources = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(resources);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceEndpointAddresses() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceEndpoint.class);
|
|
||||||
query.addCondition("$resource/Profile/Category/text() eq 'Database'");
|
|
||||||
query.setResult("$resource/Profile/AccessPoint/Interface/Endpoint/text()");
|
|
||||||
|
|
||||||
DiscoveryClient<String> client = client();
|
|
||||||
|
|
||||||
List<String> addresses = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(addresses);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someGCoreServiceEndpointAddresses() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(GCoreEndpoint.class);
|
|
||||||
query.addCondition("$resource/Profile/ServiceClass/text() eq 'DataAccess'");
|
|
||||||
query.addCondition("$resource/Profile/ServiceName/text() eq 'tree-manager-service'");
|
|
||||||
query.addVariable("$entry","$resource/Profile/AccessPoint/RunningInstanceInterfaces/Endpoint");
|
|
||||||
query.addCondition("$entry/@EntryName/string() eq 'gcube/data/tm/binder'");
|
|
||||||
query.setResult("$entry/text()");
|
|
||||||
|
|
||||||
DiscoveryClient<String> client = client();
|
|
||||||
|
|
||||||
List<String> addresses = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(addresses);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someCustomServiceEndpointResults() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceEndpoint.class);
|
|
||||||
query.addCondition("$resource/Profile/Category/text() eq 'Database'");
|
|
||||||
query.setResult("<perfect>" +
|
|
||||||
"<id>{$resource/ID/text()}</id>" +
|
|
||||||
"{$resource/Profile/AccessPoint}" +
|
|
||||||
"</perfect>");
|
|
||||||
|
|
||||||
DiscoveryClient<PerfectResult> client = clientFor(PerfectResult.class);
|
|
||||||
|
|
||||||
List<PerfectResult> results = client.submit(query);
|
|
||||||
|
|
||||||
for (PerfectResult result : results) {
|
|
||||||
System.out.println(result.id+":"+result.ap);
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@XmlRootElement(name="perfect")
|
|
||||||
private static class PerfectResult {
|
|
||||||
|
|
||||||
@XmlElement(name="id")
|
|
||||||
String id;
|
|
||||||
|
|
||||||
@XmlElementRef
|
|
||||||
AccessPoint ap;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void getResources() {
|
|
||||||
|
|
||||||
XQuery query = ICFactory.queryFor(Resource.class);
|
|
||||||
query.addCondition(String.format("$resource/ID/text() eq '%s'","bdaccb35-7f27-45a6-8ca9-11d467cb9233"));
|
|
||||||
query.setResult("<Ret>{$resource/Type}{$resource}</Ret>");
|
|
||||||
DiscoveryClient<? extends Resource> client = ICFactory.clientWith(new ResourceParser());
|
|
||||||
List<? extends Resource> resources = client.submit(query);
|
|
||||||
resources.forEach(res-> System.out.println(res.id()));
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
public static class ResourceParser implements ResultParser<Resource>{
|
|
||||||
|
|
||||||
private enum ResourceType {
|
|
||||||
GenericResource(GenericResource.class),
|
|
||||||
RuntimeResource(ServiceEndpoint.class),
|
|
||||||
RunningInstance(GCoreEndpoint.class),
|
|
||||||
Service(Software.class),
|
|
||||||
GHN(HostingNode.class);
|
|
||||||
|
|
||||||
private Class<? extends Resource> managerClass;
|
|
||||||
|
|
||||||
ResourceType(Class<? extends Resource> managerClass) {
|
|
||||||
this.managerClass = managerClass;
|
|
||||||
}
|
|
||||||
|
|
||||||
public Class<? extends Resource> getManagerClass(){
|
|
||||||
return this.managerClass;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
@Override
|
|
||||||
public Resource parse(String res) throws Exception {
|
|
||||||
String type = res.replaceAll("<Ret>\\s*<Type>([^<]*).*", "$1");
|
|
||||||
String resource = res.replaceAll(".*(<Resource.*>.*</Resource>).*", "$1");
|
|
||||||
Class<? extends Resource> classForUnmrshalling= ResourceType.valueOf(type).getManagerClass();
|
|
||||||
return Resources.unmarshal(classForUnmrshalling, new StringReader(resource));
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceEndpointsAccessData() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceEndpoint.class);
|
|
||||||
query.addCondition("$resource/Profile/Category/text() eq 'Database'")
|
|
||||||
.setResult("$resource/Profile/AccessPoint");
|
|
||||||
|
|
||||||
DiscoveryClient<AccessPoint> client = clientFor(AccessPoint.class);
|
|
||||||
|
|
||||||
List<AccessPoint> accesspoints = client.submit(query);
|
|
||||||
|
|
||||||
for (AccessPoint point : accesspoints) {
|
|
||||||
System.out.println(point.name()+":"+point.address());
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceInstances() {
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceInstance.class);
|
|
||||||
query.addCondition("$resource/Data/gcube:ServiceClass/text() eq 'DataAccess'").
|
|
||||||
addCondition("$resource/Data/gcube:ServiceName/text() eq 'tree-manager-service'");
|
|
||||||
|
|
||||||
DiscoveryClient<ServiceInstance> client = clientFor(ServiceInstance.class);
|
|
||||||
|
|
||||||
List<ServiceInstance> props = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(props);
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceInstanceReferences() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceInstance.class);
|
|
||||||
query.addCondition("$resource/Data/gcube:ServiceClass/text() eq 'DataAccess'").
|
|
||||||
addCondition("$resource/Data/gcube:ServiceName/text() eq 'tree-manager-service'")
|
|
||||||
.addCondition(format("$resource/Source/text()[ends-with(.,'%1s')]","gcube/data/tm/binder"));
|
|
||||||
|
|
||||||
DiscoveryClient<ServiceInstance> client = clientFor(ServiceInstance.class);
|
|
||||||
|
|
||||||
List<ServiceInstance> refs = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(refs);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceInstanceProperties() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceInstance.class);
|
|
||||||
query.addNamespace("tm",URI.create("http://gcube-system.org/namespaces/data/tm")).
|
|
||||||
addCondition("$resource/Data/tm:Plugin/name/text() eq 'species-tree-plugin'");
|
|
||||||
|
|
||||||
DiscoveryClient<ServiceInstance> client = clientFor(ServiceInstance.class);
|
|
||||||
|
|
||||||
List<ServiceInstance> props = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(props);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void someServiceEndpointsProperties() {
|
|
||||||
|
|
||||||
|
|
||||||
XQuery query = queryFor(ServiceEndpoint.class);
|
|
||||||
query.addVariable("$prop", "$resource/Profile/AccessPoint/Properties/Property").
|
|
||||||
addCondition("$prop/Name/text() eq 'dbname'").
|
|
||||||
addCondition("$prop/Value/text() eq 'timeseries'").
|
|
||||||
setResult("$resource/Profile/AccessPoint/Interface/Endpoint/text()");
|
|
||||||
|
|
||||||
DiscoveryClient<String> client = client();
|
|
||||||
|
|
||||||
List<String> props = client.submit(query);
|
|
||||||
|
|
||||||
System.out.println(props);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
Loading…
Reference in New Issue