reorganizing project structure and scripts

CHANGELOG.md

@@ -3,6 +3,6 @@
 All notable changes to this project will be documented in this file.
 This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## [v0.0.1-SNAPSHOT]
+## [v1.0.0-SNAPSHOT]
 
 - First Release

Dockerfile

@@ -4,6 +4,7 @@
 #     --build-arg="CONTAINER_INI=${CONTAINER_INI}" \
 #     --build-arg="JAVA_VERSION=${JAVA_VERSION}" \
 #     --build-arg="SMARTGEARS_VERSION=${SMARTGEARS_VERSION}" \
+#     -f Dockerfile \
 #     $PLATFORMS .
 
 ARG JAVA_VERSION
@@ -11,7 +12,7 @@ ARG SMARTGEARS_VERSION
 
 #FROM d4science/smartgears-distribution:${SMARTGEARS_VERSION}-java${JAVA_VERSION}-tomcat10.1.19
 FROM hub.dev.d4science.org/gcube/smartgears-distribution:${SMARTGEARS_VERSION}-java${JAVA_VERSION}-tomcat10.1.19
-    ARG CONTAINER_INI="./docker/container.ini"
+    ARG CONTAINER_INI="./dockerize/configuration/container.ini"
     ARG MVN_FINALNAME
     ARG MVN_NAME
     
@@ -19,8 +20,8 @@ FROM hub.dev.d4science.org/gcube/smartgears-distribution:${SMARTGEARS_VERSION}-j
     RUN apt-get install unzip
     #FROM smartgears-distribution:${SMARTGEARS_VERSION}-java${JAVA_VERSION}-tomcat10.1.19
 
-    COPY ./docker/logback.xml /etc/
+    COPY ./dockerize/configuration/logback.xml /etc/
-    COPY ./docker/*.gcubekey /tomcat/lib
+    COPY ./dockerize/configuration/*.gcubekey /tomcat/lib
     COPY ./target/${MVN_FINALNAME}.war /tmp
     RUN unzip /tmp/${MVN_FINALNAME}.war -d /tomcat/webapps/${MVN_NAME}
     COPY ${CONTAINER_INI} /etc/container.ini

Instructions.md

@@ -4,17 +4,18 @@
 
 start the docker container
 ```sh
-./buildImageAndStart.sh -e
+
+cd dockerize && ./buildImageAndStart.sh -e
 ```
 
 debug the docker container (read [### DEBUG] for details)
 ```sh
-./buildImageAndStart.sh -d
+cd dockerize && ./buildImageAndStart.sh -d
 ```
 
 to compile and push to harbor registry with a custom container.ini file: 
 ```sh
-./buildImageAndStart.sh -r -m  -l -c "./docker/container-XXX.ini"
+cd dockerize && ./buildImageAndStart.sh -r -m  -l -c "./docker/container-XXX.ini"
 ```
 
 ### Test URLs
@@ -42,7 +43,7 @@ curl -l 'http://localhost:8080/helloworld/gcube/resource/health'
 ### Debug
 
 start the docker container in debug Mode
-```./buildImageAndStartWithDebug.sh```
+```cd dockerize && ./buildImageAndStartWithDebug.sh -d```
 
 connect the JAVA debugger to port 5005
 
@@ -158,11 +159,11 @@ connect the JAVA debugger to port 5005
   * <scm> ???
   * <dependencyManagement> gcube dependency manager
 
-* docker folder: folder with the configurations for the exevution of the application. are copied in the docker container during building
+* dockerize/configuration folder: folder with the configurations for the exevution of the application. are copied in the docker container during building
 
-* docker/container.ini: configurations for the docker container. 
+* dockerize/configuration/container.ini: configurations for the docker container. 
   * create your own configuration copying an existing template 
-  * the default execution uses docker/docker/container.ini, it can be a simlink to a custom config
+  * the default execution uses dockerize/configuration/container.ini, it can be a simlink to a custom config
   * gitignore ignores all container*.ini files in the folder excepting container.default.ini
   * 
   * mode: [online/offline]: register the service on IS. use offline for local docker instances

dockerize/buildImageAndStart.sh

@@ -2,7 +2,7 @@
 
 # set -x   # uncomment to debug script
 set -a
-. ./build_conf
+source ./build_conf
 set +a
 
 ACCEPTED_JAVA_VERSIONs=(11 17)
@@ -119,11 +119,13 @@ while getopts $OPTSTRING opt; do
 done
 
 if [ $COMPILE = true ]; then
+	cd ..
     if [ $TEST = false ]; then
         mvn clean package -Dmaven.test.skip
     else
         mvn clean package
     fi
+	cd -
 else
     echo "skipping mvn package"
 fi
@@ -137,13 +139,17 @@ if [ $MULTI_PLATFORM ]; then
 fi
 
 echo "DOCKER_BUILD_NAME: $DOCKER_BUILD_NAME"
+cd ..
 docker build -t $DOCKER_BUILD_NAME \
     --build-arg="MVN_FINALNAME=$MVN_FINALNAME" \
     --build-arg="MVN_NAME=${MVN_NAME}" \
     --build-arg="CONTAINER_INI=${CONTAINER_INI}" \
     --build-arg="JAVA_VERSION=${JAVA_VERSION}" \
     --build-arg="SMARTGEARS_VERSION=${SMARTGEARS_VERSION}" \
+    -f Dockerfile \
     $PLATFORMS .
+    
+cd -
 
 if [ ${PUSH_DOCKER} = true ]; then
     docker tag $DOCKER_BUILD_NAME $DOCKER_IMAGE_NAME

dockerize/build_conf

@@ -1,41 +1,55 @@
-MVN_VERSION=$(mvn -q \
+MVN_VERSION=$(cd .. && mvn -q \
         -Dexec.executable=echo \
         -Dexec.args='${project.version}' \
         --non-recursive \
         exec:exec)
+echo "MVN_VERSION: ${MVN_VERSION}"
 
-
+MVN_NAME=$(cd .. && mvn -q \
-MVN_NAME=$(mvn -q \
         -Dexec.executable=echo \
         -Dexec.args='${project.artifactId}' \
         --non-recursive \
         exec:exec)
+echo "MVN_NAME: ${MVN_NAME}"
 
-MVN_FINALNAME=$(mvn -q \
+MVN_FINALNAME=$(cd .. && mvn -q \
         -Dexec.executable=echo \
         -Dexec.args='${project.build.finalName}' \
         --non-recursive \
         exec:exec)
+echo "MVN_FINALNAME: ${MVN_FINALNAME}"
 
-JAVA_VERSION=$(mvn -q \
+JAVA_VERSION=$(cd .. && mvn -q \
         -Dexec.executable=echo \
         -Dexec.args='${maven.compiler.target}' \
         --non-recursive \
         exec:exec)
+echo "JAVA_VERSION: ${JAVA_VERSION}"
 
 TOMCAT_VERSION=tomcat10.1.19
-SMARTGEARS_VERSION=$(mvn -q \
+echo "TOMCAT_VERSION: ${TOMCAT_VERSION}"
+
+SMARTGEARS_VERSION=$(cd .. && mvn -q \
         -Dexec.executable=echo \
         -Dexec.args='${docker.smartgear.version}' \
         --non-recursive \
         exec:exec)
+echo "SMARTGEARS_VERSION: ${SMARTGEARS_VERSION}"
 
-CONTAINER_INI="./docker/container.ini"
+CONTAINER_INI="./dockerize/configuration/container.ini"
+echo "CONTAINER_INI: ${CONTAINER_INI}"
 
 IMAGE_VERSION=${MVN_VERSION}-java${JAVA_VERSION}-smartgears${SMARTGEARS_VERSION}
+echo "IMAGE_VERSION: ${IMAGE_VERSION}"
+
 DOCKER_BUILD_NAME=$MVN_NAME:$IMAGE_VERSION
+echo "DOCKER_BUILD_NAME: ${DOCKER_BUILD_NAME}"
 
 SMARTGEAR_IMAGE=hub.dev.d4science.org/gcube/smartgears-distribution:${SMARTGEARS_VERSION}-java${JAVA_VERSION}-${TOMCAT_VERSION}
+echo "SMARTGEAR_IMAGE: ${SMARTGEAR_IMAGE}"
 
 DOCKER_IMAGE_NAME=d4science/$DOCKER_BUILD_NAME
+echo "DOCKER_IMAGE_NAME: ${DOCKER_IMAGE_NAME}"
+
 HARBOR_IMAGE_NAME=hub.dev.d4science.org/gcube/$DOCKER_BUILD_NAME
+echo "HARBOR_IMAGE_NAME: ${HARBOR_IMAGE_NAME}"

documentation/enunciate.xml

@@ -4,8 +4,8 @@
 	xsi:noNamespaceSchemaLocation="http://enunciate.webcohesion.com/schemas/enunciate-2.14.0.xsd">
 	<description package="org.gcube.service.idm" />
 	<api-classes>
-		<include pattern="org.gcube.service.helloword.rest.*" />
+		<include pattern="org.gcube.service.helloworld.rest.*" />
-		<exclude pattern="org.gcube.service.helloword.*" />
+		<exclude pattern="org.gcube.service.helloworld.*" />
 	</api-classes>
 	<modules>
 		<gwt-json-overlay disabled="true" />

documentation/sphinx/conf.py

@@ -16,7 +16,7 @@ import os
 
 
 def getVersion():
-    cmd = """cd .. && \
+    cmd = """cd ../.. && \
         mvn -q \
         -Dexec.executable=echo \
         -Dexec.args='${project.version}' \
@@ -27,9 +27,9 @@ def getVersion():
 
 # -- Project information -----------------------------------------------------
 
-project = 'gCube Catalogue (gCat) Service'
+project = 'gCube Hello World Service SG4'
-copyright = '2022, Luca Frosini (ISTI-CNR)'
+copyright = '2024, gCube System'
-author = 'Luca Frosini (ISTI-CNR)'
+author = 'Luca Frosini (ISTI-CNR), Lucio Lelii (ISTI-CNR), Alfredo Oliviero (ISTI-CNR)'
 
 # The full version, including alpha/beta/rc tags
 release = getVersion()

gcube/extra-resources/WEB-INF/application.yaml

@@ -7,3 +7,4 @@ excludes:
   - path: /guest
   - path: /guest/*
   - path: /api-docs/*
+  - path: /docs/*

pom.xml

@@ -2,19 +2,81 @@
 	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
 	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
 	<modelVersion>4.0.0</modelVersion>
-
+	
-	<groupId>org.gcube.service</groupId>
-	<artifactId>helloworld</artifactId>
-	<version>0.0.1-SNAPSHOT</version>
-	<name>Smartgears HelloWorld Service</name>
-	<packaging>war</packaging>
-
 	<parent>
 		<groupId>org.gcube.tools</groupId>
 		<artifactId>maven-parent</artifactId>
 		<version>1.2.0</version>
 	</parent>
 
+
+	<groupId>org.gcube.service</groupId>
+	<artifactId>helloworld</artifactId>
+	<version>1.0.0-SNAPSHOT</version>
+	<name>Smartgears 4 HelloWorld Service</name>
+	<description>
+		
+	</description>
+	<packaging>war</packaging>
+
+	<organization>
+    	<name>gCube System</name>
+    	<url>https://www.gcube-system.org/</url>
+  	</organization>
+	
+	<developers>
+	    <developer>
+			<id>luca.frosini</id>
+			<name>Luca Frosini</name>
+			<email>luca.frosini@isti.cnr.it</email>
+			<url>https://www.isti.cnr.it/en/about/people-detail/141/Frosini_Luca</url>
+			<organization>ISTI-CNR</organization>
+	      	<organizationUrl>https://www.isti.cnr.it/</organizationUrl>
+			<roles>
+				<role>researcher</role>
+				<role>developer</role>
+			</roles>
+			<timezone>Europe/Rome</timezone>
+			<properties>
+				<picUrl>https://gravatar.com/lucafrosini</picUrl>
+			</properties>
+	    </developer>
+	    <developer>
+			<id>lucio.lelii</id>
+			<name>Lucio Lelii</name>
+			<email>lucio.lelii@isti.cnr.it</email>
+			<url></url>
+			<organization>ISTI-CNR</organization>
+	      	<organizationUrl>https://www.isti.cnr.it/en/about/people-detail/184/Lelii_Lucio/</organizationUrl>
+			<roles>
+				<role>researcher</role>
+				<role>developer</role>
+			</roles>
+			<timezone>Europe/Rome</timezone>
+			<properties>
+				<picUrl>https://gravatar.com/latinswing</picUrl>
+			</properties>
+	    </developer>
+	    <developer>
+			<id>alfredo.oliviero</id>
+			<name>Alfredo Oliviero</name>
+			<email>alfredo.oliviero@isti.cnr.it</email>
+			<url></url>
+			<organization>ISTI-CNR</organization>
+	      	<organizationUrl>https://www.isti.cnr.it/en/about/people-detail/1087/Oliviero_Alfredo/</organizationUrl>
+			<roles>
+				<role>researcher</role>
+				<role>developer</role>
+			</roles>
+			<timezone>Europe/Rome</timezone>
+			<properties>
+				<picUrl>https://gravatar.com/alfredooliviero</picUrl>
+			</properties>
+	    </developer>
+	</developers>
+
+
+
 	<properties>
 		<java.version>11</java.version>
 
@@ -24,15 +86,17 @@
 
 		<!-- OPTIONAL. for authorization-control-library -->
 		<aspectj-plugin.version>1.14.0</aspectj-plugin.version>
-		
+
 		<enunciate.version>2.16.1</enunciate.version>
-	
+
 		<docker.smartgear.version>4.0.1-SNAPSHOT</docker.smartgear.version>
 	</properties>
 
 	<scm>
-		<connection>scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</connection>
+		<connection>
-		<developerConnection>scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</developerConnection>
+			scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</connection>
+		<developerConnection>
+			scm:git:https://code-repo.d4science.org/gCubeSystem/${project.artifactId}.git</developerConnection>
 		<url>https://code-repo.d4science.org/gCubeSystem/${project.artifactId}</url>
 	</scm>
 
@@ -119,29 +183,29 @@
 			<!-- OPTIONAL. authorization-control-library: add this plugin if you
 			want to use gcube
 			authorization control funzionalities -->
-<!--			<plugin>-->
+			<!--			<plugin>-->
-<!--				<groupId>org.codehaus.mojo</groupId>-->
+			<!--				<groupId>org.codehaus.mojo</groupId>-->
-<!--				<artifactId>aspectj-maven-plugin</artifactId>-->
+			<!--				<artifactId>aspectj-maven-plugin</artifactId>-->
-<!--				<version>${aspectj-plugin.version}</version>-->
+			<!--				<version>${aspectj-plugin.version}</version>-->
-<!--				<configuration>-->
+			<!--				<configuration>-->
-<!--					<complianceLevel>${java.version}</complianceLevel>-->
+			<!--					<complianceLevel>${java.version}</complianceLevel>-->
-<!--					<source>${java.version}</source>-->
+			<!--					<source>${java.version}</source>-->
-<!--					<target>${java.version}</target>-->
+			<!--					<target>${java.version}</target>-->
-<!--					<aspectLibraries>-->
+			<!--					<aspectLibraries>-->
-<!--						<aspectLibrary>-->
+			<!--						<aspectLibrary>-->
-<!--							<groupId>org.gcube.common</groupId>-->
+			<!--							<groupId>org.gcube.common</groupId>-->
-<!--							<artifactId>authorization-control-library</artifactId>-->
+			<!--							<artifactId>authorization-control-library</artifactId>-->
-<!--						</aspectLibrary>-->
+			<!--						</aspectLibrary>-->
-<!--					</aspectLibraries>-->
+			<!--					</aspectLibraries>-->
-<!--				</configuration>-->
+			<!--				</configuration>-->
-<!--				<executions>-->
+			<!--				<executions>-->
-<!--					<execution>-->
+			<!--					<execution>-->
-<!--						<goals>-->
+			<!--						<goals>-->
-<!--							<goal>compile</goal>-->
+			<!--							<goal>compile</goal>-->
-<!--						</goals>-->
+			<!--						</goals>-->
-<!--					</execution>-->
+			<!--					</execution>-->
-<!--				</executions>-->
+			<!--				</executions>-->
-<!--			</plugin>-->
+			<!--			</plugin>-->
 
 
 			<!-- Sphinx plugin' -->
@@ -150,12 +214,14 @@
 				<artifactId>sphinx-maven-plugin</artifactId>
 				<version>2.10.0</version>
 				<configuration>
-					<outputDirectory>${project.build.directory}/${project.build.finalName}/docs</outputDirectory>
+					<outputDirectory>
+						${project.build.directory}${file.separator}${project.build.finalName}${file.separator}docs</outputDirectory>
 					<builder>html</builder>
-					<configDirectory>${basedir}/sphinx</configDirectory>
+					<configDirectory>${project.basedir}${file.separator}documentation${file.separator}sphinx</configDirectory>
-					<sourceDirectory>${basedir}/sphinx</sourceDirectory>
+					<sourceDirectory>${project.basedir}${file.separator}documentation${file.separator}sphinx</sourceDirectory>
 					<!-- brew install sphinx-doc -->
-					<binaryUrl>file:/opt/homebrew/opt/sphinx-doc/bin/sphinx-build</binaryUrl>
+					<binaryUrl>
+						file:/opt/homebrew/opt/sphinx-doc/bin/sphinx-build</binaryUrl>
 				</configuration>
 				<executions>
 					<execution>
@@ -180,34 +246,35 @@
 						</goals>
 					</execution>
 				</executions>
+				<configuration>
+<!--					<docsDir>${project.build.directory}${file.separator}${project.artifactId}-${project.version}${file.separator}api-docs</docsDir>-->
+					<configFile>${project.basedir}${file.separator}documentation${file.separator}enunciate.xml</configFile>
+				</configuration>
 			</plugin>
 
-			<!-- Copy Enunciate Documentation from your-application/api-docs
+			<!-- Copy Enunciate Documentation from your-application/api-docs into your war -->
-				into your war -->
 			<plugin>
-				<groupId>org.apache.maven.plugins</groupId>
+			    <groupId>org.apache.maven.plugins</groupId>
-				<artifactId>maven-resources-plugin</artifactId>
+			    <artifactId>maven-resources-plugin</artifactId>
-				<executions>
+			    <executions>
-					<execution>
+			        <execution>
-						<id>copy-enunciate-docs</id>
+			            <id>copy-enunciate-docs</id>
-						<phase>process-resources</phase>
+			            <phase>process-resources</phase>
-						<goals>
+			            <goals>
-							<goal>copy-resources</goal>
+			                <goal>copy-resources</goal>
-						</goals>
+			            </goals>
-						<configuration>
+			            <configuration>
-							<outputDirectory>target</outputDirectory>
+			                <outputDirectory>target</outputDirectory>
-							<resources>
+			                <resources>
-								<resource>
+			                    <resource>
-									<targetPath>
+			                        <targetPath>${project.build.directory}${file.separator}${project.artifactId}-${project.version}${file.separator}api-docs</targetPath>
-										${project.build.directory}/${project.artifactId}-${project.version}/api-docs</targetPath>
+			                        <directory>${project.build.directory}/api-docs</directory>
-									<directory>
+			                        <filtering>true</filtering>
-										${project.build.directory}/api-docs</directory>
+			                    </resource>
-									<filtering>true</filtering>
+			                </resources>
-								</resource>
+			            </configuration>
-							</resources>
+			        </execution>
-						</configuration>
+			    </executions>
-					</execution>
-				</executions>
 			</plugin>
 			
 		</plugins>

src/main/webapp/WEB-INF/web.xml

@@ -14,11 +14,19 @@
 			<param-name>jersey.config.server.provider.packages</param-name>
 			<param-value>org.gcube.service.helloworld.rest</param-value>
 		</init-param>
-		<init-param>
+<!--		<init-param>-->
-			<param-name>jersey.config.server.provider.packages</param-name>
+<!--			<param-name>jersey.config.server.provider.packages</param-name>-->
-			<param-value>org.gcube.service.helloworld.mappers</param-value>
+<!--			<param-value>org.gcube.service.helloworld.mappers</param-value>-->
-		</init-param>
+<!--		</init-param>-->
 	</servlet>
+	<servlet-mapping>
+		<servlet-name>default</servlet-name>
+		<url-pattern>/docs/*</url-pattern>
+	</servlet-mapping>
+    <servlet-mapping>
+		<servlet-name>default</servlet-name>
+		<url-pattern>/api-docs/*</url-pattern>
+	</servlet-mapping>
 	<servlet-mapping>
 		<servlet-name>helloword</servlet-name>
 		<url-pattern>/*</url-pattern>