ecological-engine/src/test/java/org/gcube/dataanalysis/ecoengine/test/signalprocessing/TestSimpleSignal.java

422 lines
17 KiB
Java

package org.gcube.dataanalysis.ecoengine.test.signalprocessing;
import java.util.List;
import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger;
import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration;
import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType;
import org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent;
import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory;
import org.gcube.dataanalysis.ecoengine.test.regression.Regressor;
import org.gcube.dataanalysis.ecoengine.transducers.TimeSeriesAnalysis;
public class TestSimpleSignal {
// static AlgorithmConfiguration[] configs = {periodicSignalConfig(), russianSignalConfig(),simpleSignalConfig(), occurrencePointsSignalConfig(),hugeSignalConfig()};
//static AlgorithmConfiguration[] configs = {periodicSignalConfig(), russianSignalConfig(),simpleSignalConfig()};
// static AlgorithmConfiguration[] configs = {NAFOSignalConfig()};
// static AlgorithmConfiguration[] configs = {largeCustomSignalConfig()};
// static AlgorithmConfiguration[] configs = {temperatureSignalConfig()};
static AlgorithmConfiguration[] configs = {periodicSignalConfig()};
// static AlgorithmConfiguration[] configs = {simpleSignalConfig()};
// static AlgorithmConfiguration[] configs = {sawSignalConfig()};
// static AlgorithmConfiguration[] configs = {temperatureSignalConfig()};
// static AlgorithmConfiguration[] configs = {temperatureBariSignalConfig()};
// static AlgorithmConfiguration[] configs = {russianSignalConfig()};
// static AlgorithmConfiguration[] configs = {largeCustomSignalConfig()};
// static AlgorithmConfiguration[] configs = {occurrencePointsSignalConfig()};
// static AlgorithmConfiguration[] configs = {hugeSignalConfig()};
// static AlgorithmConfiguration[] configs = {IOTCSSignalConfig()};
// static AlgorithmConfiguration[] configs = {temperatureShortSignalConfig()};
public static void main(String[] args) throws Exception {
TimeSeriesAnalysis.display=true;
int wLength = (int) Math.pow(2, 1);
System.out.println("L:"+wLength);
for (int i = 0; i < configs.length; i++) {
System.out.println("*****************TEST "+i+" *****************");
List<ComputationalAgent> trans = null;
trans = TransducerersFactory.getTransducerers(configs[i]);
trans.get(0).init();
Regressor.process(trans.get(0));
StatisticalType st = trans.get(0).getOutput();
AnalysisLogger.getLogger().debug("ST:" + st);
trans = null;
System.out.println("*****************END TEST*****************");
}
}
public static AlgorithmConfiguration IOTCSSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_idb73029b9_226e_4d0f_b828_24854d0b7b44");
config.setParam("ValueColum", "cpue");
config.setParam("FFT_Window_Samples", "200");
config.setParam("AggregationFunction", "SUM");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration simpleSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_id4dd368bf_63fb_4d19_8e31_20ced63a477d");
config.setParam("ValueColum", "quantity");
config.setParam("FFT_Window_Samples", "70");
config.setParam("SSA_Window_in_Samples", "30");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration russianSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "generic_ideb9efbe0_61ad_4eea_b0ee_95e64ce11b28");
config.setParam("ValueColum", "quantity");
config.setParam("FFT_Window_Samples", "70");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration occurrencePointsSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "generic_id037d302d_2ba0_4e43_b6e4_1a797bb91728");
config.setParam("ValueColum", "speed");
config.setParam("TimeColum", "datetime");
config.setParam("AggregationFunction", "AVG");
config.setParam("FFT_Window_Samples", "200");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration periodicSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("FFT_Window_Samples", "200");
config.setParam("TimeSeriesTable", "timeseries_ide814eb07_c13b_41b3_a240_aa99446db831");
config.setParam("Sensitivity", "HIGH");
config.setParam("ValueColum", "quantity");
config.setParam("FrequencyResolution", "0.01");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration hugeSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "generic_id634a660c_4d1a_410c_aa45_eb6e4c5afdf9");
config.setParam("ValueColum", "quantity");
config.setParam("TimeColum", "years");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration NAFOSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_id39c6c28f_2484_421c_8ffb_9c2cc2330c62");
config.setParam("ValueColum", "speed");
config.setParam("FFT_Window_Samples", "50");
config.setParam("SSA_Window_in_Samples", "30");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration sawSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_ide814eb07_c13b_41b3_a240_aa99446db831");
config.setParam("ValueColum", "quantity");
config.setParam("FFT_Window_Samples", "50");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration largeCustomSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_idd3dd174e_242c_4f8b_920a_faa79691ca43");
config.setParam("ValueColum", "quantity");
config.setParam("FFT_Window_Samples", "14");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration earthquakesSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_id0f44b131_de55_4839_b07f_2721574e2b9d");
config.setParam("ValueColum", "magnitude");
config.setParam("FFT_Window_Samples", "14");
config.setParam("SSA_Window_in_Samples", "20");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration temperatureSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_id08b3abb9_c7b0_4b82_8117_64b69055416f");
config.setParam("ValueColum", "fvalue");
config.setParam("FFT_Window_Samples", "52");
config.setParam("SSA_Window_in_Samples", "10");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration temperatureBariSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "timeseries_id5b39298a_0e32_4a9c_8e6c_f2e48e3f1b1a");
config.setParam("ValueColum", "fvalue");
config.setParam("FFT_Window_Samples", "500");
config.setParam("SSA_Window_in_Samples", "10");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
public static AlgorithmConfiguration temperatureShortSignalConfig() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setAgent("TIME_SERIES_PROCESSING");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("DatabaseUserName", "gcube");
config.setParam("DatabasePassword", "d4science2");
config.setParam("DatabaseURL", "jdbc:postgresql://localhost/testdb");
config.setParam("DatabaseDriver", "org.postgresql.Driver");
// vessels
config.setParam("TimeSeriesTable", "testtextractiontemp");
config.setParam("ValueColum", "fvalue");
config.setParam("FFT_Window_Samples", "500");
config.setParam("SSA_Window_in_Samples", "10");
config.setParam("SSA_EigenvaluesThreshold", "0.7");
config.setParam("SSA_Points_to_Forecast", "10");
AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
config.setGcubeScope("/gcube");
config.setConfigPath("./cfg");
return config;
}
}