From 09e73c8d87dfba8ad4b722ef0ca89f42cdf79bea Mon Sep 17 00:00:00 2001
From: Gianpaolo Coro <gianpaolo.coro@isti.cnr.it>
Date: Tue, 4 Jun 2013 08:42:46 +0000
Subject: [PATCH] added debug strings

git-svn-id: https://svn.d4science.research-infrastructures.eu/gcube/trunk/data-analysis/EcologicalEngine@76713 82a268e6-3cf1-43bd-a215-b396298e98cf
---
 .../dataanalysis/ecoengine/interfaces/DataAnalysis.java  | 9 +++++++--
 .../interfaces/StandardLocalExternalAlgorithm.java       | 6 +++++-
 2 files changed, 12 insertions(+), 3 deletions(-)

diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java b/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java
index c734704..9a71dca 100644
--- a/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java
+++ b/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java
@@ -108,12 +108,17 @@ public abstract class DataAnalysis implements Evaluator{
 
 	
 	public void init() throws Exception {
+		init(true);
+	}
+
+	public void init(boolean initRapidMiner) throws Exception {
 		AnalysisLogger.setLogger(config.getConfigPath() + AlgorithmConfiguration.defaultLoggerFile);
 		// init db connection
 		connection = AlgorithmConfiguration.getConnectionFromConfig(config);
-		config.initRapidMiner();
+		if (initRapidMiner)
+			config.initRapidMiner();
 	}
-
+	
 	
 	public void setConfiguration(AlgorithmConfiguration config) {
 		this.config = config;
diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/StandardLocalExternalAlgorithm.java b/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/StandardLocalExternalAlgorithm.java
index 74f9e5f..d7c3fdf 100644
--- a/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/StandardLocalExternalAlgorithm.java
+++ b/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/StandardLocalExternalAlgorithm.java
@@ -22,7 +22,7 @@ public abstract class StandardLocalExternalAlgorithm implements Transducerer {
 	protected float status = 0;
 	protected List<StatisticalType> inputs = new ArrayList<StatisticalType>();
 	protected ResourceFactory resourceManager;
-	protected LinkedHashMap<String, String> outputParameters = new LinkedHashMap<String, String>();
+	public LinkedHashMap<String, String> outputParameters = new LinkedHashMap<String, String>();
 	
 	
 	protected void addEnumerateInput(Object itemsList, String name, String description, String defaultvalue) {
@@ -42,6 +42,10 @@ public abstract class StandardLocalExternalAlgorithm implements Transducerer {
 		inputs.add(new PrimitiveType(String.class.getName(), null, PrimitiveTypes.STRING, name, description, defaultvalue));
 	}
 
+	protected void addNumberInput(String name, String description, String defaultvalue) {
+		inputs.add(new PrimitiveType(Integer.class.getName(), null, PrimitiveTypes.NUMBER, name,description,defaultvalue));
+	}
+	
 	protected void addOutputString(String name, String value) {
 		outputParameters.put(name, value);
 	}