ecological-engine-geospatia.../src/main/java/org/gcube/dataanalysis/geo/algorithms/SpeciesDistributionsMapsCre...

75 lines
3.1 KiB
Java

package org.gcube.dataanalysis.geo.algorithms;
import java.util.ArrayList;
import java.util.List;
import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration;
import org.gcube.dataanalysis.ecoengine.datatypes.ColumnType;
import org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType;
import org.gcube.dataanalysis.ecoengine.datatypes.InputTable;
import org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.TableTemplates;
public class SpeciesDistributionsMapsCreatorFromCsquares extends MapsCreator {
@Override
public void init() throws Exception {
log("MAPS_CREATOR");
datastore = "timeseriesws";
defaultStyle = "Species_prob";
workspace = "aquamaps";
username = "statistical.manager";
purpose = "To Publish Geometric Layers for Species Distribution Maps";
credits = "Generated via the Statistical Manager Service";
keyword = "Species Probability Distribution";
}
@Override
protected void setInputParameters() {
try {
List<TableTemplates> templates = new ArrayList<TableTemplates>();
addRemoteDatabaseInput(databaseParameterName, dburlParameterName, dbuserParameterName, dbpasswordParameterName, "driver", "dialect");
templates.add(TableTemplates.GENERIC);
addStringInput(layerNameParameter, "The name of the layer to produce", "Statistical Prob. Distribution");
InputTable tinput = new InputTable(templates, inputTableParameter, "The table information to geo-spatialize");
ColumnType xColumn = new ColumnType(inputTableParameter, csquareParameter, "The column containing csquare codes", "", false);
ColumnType probabilityDimension = new ColumnType(inputTableParameter, probabilityParameter, "The column containing probability information", "", false);
inputs.add(tinput);
inputs.add(xColumn);
inputs.add(probabilityDimension);
DatabaseType.addDefaultDBPars(inputs);
} catch (Throwable e) {
e.printStackTrace();
}
}
public static void main(String[] args) throws Exception {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setConfigPath("./cfg/");
config.setPersistencePath("./cfg/");
config.setGcubeScope("/gcube");
config.setParam("DatabaseUserName", "utente");
config.setParam("DatabasePassword", "d4science");
config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
config.setParam(dburlParameterName, "jdbc:postgresql://geoserver-test.d4science-ii.research-infrastructures.eu/timeseriesgisdb");
config.setParam(dbuserParameterName, "postgres");
config.setParam(dbpasswordParameterName, "d4science2");
config.setParam(inputTableParameter, "hspec_id_4cd0644e_46c5_4b33_b8fa_85b0c6b01982");
config.setParam(csquareParameter, "csquarecode");
config.setParam(probabilityParameter, "probability");
config.setParam("ServiceUserName", "gianpaolo.coro");
config.setParam(layerNameParameter, "Generic Species");
MapsCreator maps = new SpeciesDistributionsMapsCreatorFromCsquares();
maps.setConfiguration(config);
maps.init();
maps.compute();
}
}