119 lines
5.3 KiB
Java
119 lines
5.3 KiB
Java
package org.gcube.dataanalysis.geo.test;
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import java.util.ArrayList;
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import java.util.Collection;
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import java.util.Collections;
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import java.util.List;
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import org.gcube.contentmanagement.graphtools.utils.MathFunctions;
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import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger;
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import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration;
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import org.gcube.dataanalysis.geo.infrastructure.GeoNetworkInspector;
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import org.gcube.dataanalysis.geo.matrixmodel.MatrixExtractor;
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import org.geotoolkit.metadata.iso.identification.DefaultDataIdentification;
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import org.opengis.metadata.Metadata;
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import org.opengis.metadata.identification.Identification;
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import org.opengis.metadata.identification.Keywords;
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import org.opengis.util.InternationalString;
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public class TestLayersRetrieval {
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static String cfg = "./cfg/";
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//TODO: filter WoA names and attach them to the title
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public static void main(String[] args) throws Exception{
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long t0 = System.currentTimeMillis();
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AnalysisLogger.setLogger(cfg+AlgorithmConfiguration.defaultLoggerFile);
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GeoNetworkInspector featurer = new GeoNetworkInspector();
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featurer.setScope(null);
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List<Metadata> metae = featurer.getAllGNInfobyText("thredds", "1");
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System.out.println("ELAPSED TIME: "+(System.currentTimeMillis()-t0));
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String d = "#";
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System.out.println("Parameter Name"+d+"Time Range"+d+"Dimensions"+d+"Unit of Measure"+d+"Resolution (decimal degrees)"+d+"Details");
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List<String> table = new ArrayList<String>();
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for (Metadata meta:metae){
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Identification id = meta.getIdentificationInfo().iterator().next();
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String title = id.getCitation().getTitle().toString();
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String abstractF = id.getAbstract().toString();
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DefaultDataIdentification did = (DefaultDataIdentification) id;
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double resolution = MathFunctions.roundDecimal(did.getSpatialResolutions().iterator().next().getDistance(),3);
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Collection<? extends Keywords> keys = id.getDescriptiveKeywords();
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String unit = "";
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for (Keywords key:keys){
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for(InternationalString string:key.getKeywords()) {
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String ss = string.toString();
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if (ss.startsWith("unit:"))
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unit = ss.substring(ss.indexOf(":")+1);
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}
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}
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String[] elements =null;
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if (title.contains("Bio-Oracle"))
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{
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elements = new String[4];
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elements[0]=title;
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elements[1]=abstractF.substring(abstractF.indexOf("Aggregated"),abstractF.lastIndexOf("]")+1);
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elements[2]="2D";
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unit = abstractF.substring(abstractF.indexOf("(")+1,abstractF.lastIndexOf(")"));
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elements[3]=abstractF;
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}
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else if (title.contains("GEBCO"))
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{
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elements = new String[4];
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elements[0]=title;
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elements[1]="2008";
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elements[2]="3D";
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unit = "m";
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elements[3]=abstractF;
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}
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else if (title.contains("WorldClimBio")||title.contains("Etna")||title.contains("OpenModeller"))
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{
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continue;
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}
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else
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elements = parseTitle(title);
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String entry = elements[0]+d+elements[1]+d+elements[2]+d+unit+d+resolution+d+elements[3];
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if (!table.contains(entry)){
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table.add(entry);
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// System.out.println(elements[0]+d+elements[1]+d+elements[2]+d+resolution+d+elements[3]);
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}
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}
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Collections.sort(table);
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for (String element:table){
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System.out.println(element);
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}
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// System.out.println("ELAPSED TIME: "+(System.currentTimeMillis()-t0));
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}
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public static void main1(String[] args) throws Exception{
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// String example = "Standard Deviation from Statistical Mean in [07-01-01 01:00] (3D) {World Ocean Atlas 09: Sea Water Temperature - annual: dods://thredds.research-infrastructures.eu/thredds/dodsC/public/netcdf/temperature_annual_1deg_ENVIRONMENT_OCEANS_.nc}";
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// String example = "Salinity from [12-15-99 01:00] to [12-15-09 01:00] (2D) {Native grid ORCA025.L75 monthly average: Data extracted from dataset http://atoll-mercator.vlandata.cls.fr:44080/thredds/dodsC/global-reanalysis-phys-001-004-b-ref-fr-mjm95-grids}";
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String example = "Salinity from [12-15-99 01:00] to [12-15-09 01:00] (2D) {Native grid ORCA025.L75 monthly average: Data extracted from dataset http://atoll-mercator.vlandata.cls.fr:44080/thredds/dodsC/global-reanalysis-phys-001-004-b-ref-fr-mjm95-grids}";
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parseTitle(example);
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}
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public static String[] parseTitle(String title){
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// System.out.println("Parsing Title:"+title);
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String timerange = title.substring(title.indexOf("["),title.lastIndexOf("]")+1);
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// timerange = timerange.replace("] to [", " ; ");
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// System.out.println(timerange);
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String realtitle = title.substring(0,title.indexOf("[")).trim();
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realtitle = realtitle.substring(0,realtitle.lastIndexOf(" ")).trim();
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// System.out.println(realtitle);
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String dimensions = title.substring(title.indexOf("] (")+3);
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dimensions = dimensions.substring(0,dimensions.indexOf(")")).trim();
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// System.out.println(dimensions);
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String notes = title.substring(title.indexOf("{")+1,title.lastIndexOf("}"));
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String woa = "World Ocean Atlas 09:";
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String prefixnote = "";
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if (notes.startsWith(woa)){
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prefixnote = notes.substring(woa.length()+1);
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prefixnote = prefixnote.substring(0,prefixnote.indexOf(":")).trim()+": ";
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}
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// System.out.println(notes);
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String[] elements = new String[]{prefixnote+realtitle, timerange, dimensions,notes};
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return elements;
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}
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}
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