Install the deb jags and jabbamodel/JABBA
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@ -7,6 +7,7 @@ LABEL org.opencontainers.image.licenses="GPL-2.0-or-later" \
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# Some R dependencies
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# Some R dependencies
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RUN apt-get update && apt-get install -y \
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RUN apt-get update && apt-get install -y \
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jags \
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libxml2 \
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libxml2 \
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git \
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git \
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gdal-bin \
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gdal-bin \
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@ -59,6 +60,8 @@ RUN echo "GITHUB_PAT=$GITHUB_PAT" >> /etc/R/Renviron.site
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#RUN mv -f /etc/R/Renviron.site.1 /etc/R/Renviron.site
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#RUN mv -f /etc/R/Renviron.site.1 /etc/R/Renviron.site
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/focal/latest DanOvando/sraplus
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/focal/latest DanOvando/sraplus
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/focal/latest sofia-tsaf/SOFIA
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/focal/latest sofia-tsaf/SOFIA
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/focal/latest jabbamodel/JABBA
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# Ensure that we remove the source packages
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# Ensure that we remove the source packages
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RUN rm -fr /tmp/downloaded_packages/*
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RUN rm -fr /tmp/downloaded_packages/*
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