From 8e7edbb0751e3a1fb99f4f338866dc5342852320 Mon Sep 17 00:00:00 2001 From: Lucio Lelii Date: Mon, 15 Oct 2018 17:41:21 +0000 Subject: [PATCH] git-svn-id: https://svn.d4science.research-infrastructures.eu/gcube/trunk/data-analysis/DataMiner@173499 82a268e6-3cf1-43bd-a215-b396298e98cf --- pom.xml | 16 +- .../mapping/dataspace/DataspaceManager.java | 448 +++++++++--------- 2 files changed, 231 insertions(+), 233 deletions(-) diff --git a/pom.xml b/pom.xml index d2607b2..f9f4a89 100644 --- a/pom.xml +++ b/pom.xml @@ -124,7 +124,7 @@ javassist 3.12.1.GA - + + + org.gcube.common + storagehub-client-library + [1.0.0-SNAPSHOT, 2.0.0-SNAPSHOT) + + + org.gcube.common + storagehub-model + [1.0.0-SNAPSHOT, 2.0.0-SNAPSHOT) + + xerces xercesImpl diff --git a/src/main/java/org/gcube/dataanalysis/wps/statisticalmanager/synchserver/mapping/dataspace/DataspaceManager.java b/src/main/java/org/gcube/dataanalysis/wps/statisticalmanager/synchserver/mapping/dataspace/DataspaceManager.java index 28b243a..2d61f10 100644 --- a/src/main/java/org/gcube/dataanalysis/wps/statisticalmanager/synchserver/mapping/dataspace/DataspaceManager.java +++ b/src/main/java/org/gcube/dataanalysis/wps/statisticalmanager/synchserver/mapping/dataspace/DataspaceManager.java @@ -13,16 +13,14 @@ import java.util.List; import java.util.Map; import java.util.UUID; -import org.gcube.common.homelibrary.home.Home; -import org.gcube.common.homelibrary.home.HomeLibrary; -import org.gcube.common.homelibrary.home.HomeManager; -import org.gcube.common.homelibrary.home.HomeManagerFactory; -import org.gcube.common.homelibrary.home.User; -import org.gcube.common.homelibrary.home.workspace.Workspace; -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceItem; -import org.gcube.common.homelibrary.home.workspace.folder.FolderItem; -import org.gcube.common.homelibrary.util.WorkspaceUtil; +import org.gcube.common.storagehub.client.dsl.FileContainer; +import org.gcube.common.storagehub.client.dsl.FolderContainer; +import org.gcube.common.storagehub.client.dsl.ItemContainer; +import org.gcube.common.storagehub.client.dsl.StorageHubClient; +import org.gcube.common.storagehub.model.Metadata; +import org.gcube.common.storagehub.model.items.FolderItem; +import org.gcube.common.storagehub.model.items.GCubeItem; +import org.gcube.common.storagehub.model.items.Item; import org.gcube.contentmanagement.lexicalmatcher.utils.FileTools; import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration; import org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.AbstractEcologicalEngineMapper; @@ -88,43 +86,55 @@ public class DataspaceManager implements Runnable { } - public void createFoldersNetwork(Workspace ws, WorkspaceFolder root) throws Exception { + public FolderContainer createFoldersNetwork() throws Exception { LOGGER.debug("Dataspace->Creating folders for DataMiner"); - // manage folders: create the folders network - if (!ws.exists(dataminerFolder, root.getId())) { - LOGGER.debug("Dataspace->Creating DataMiner main folder"); - root.createFolder(dataminerFolder, "A folder collecting DataMiner experiments data and computation information"); - ((WorkspaceFolder) root.find(dataminerFolder)).setSystemFolder(true); - } - WorkspaceFolder dataminerFolderWS = (WorkspaceFolder) root.find(dataminerFolder); + StorageHubClient shc = new StorageHubClient(); - if (!ws.exists(importedDataFolder, dataminerFolderWS.getId())) { + FolderContainer root =shc.getWSRoot(); + + List> dataminerItems = root.findByName(dataminerFolder).getContainers(); + + FolderContainer dataminerFolderContainer; + + // manage folders: create the folders network + if (dataminerItems.isEmpty()) { + LOGGER.debug("Dataspace->Creating DataMiner main folder"); + dataminerFolderContainer = root.newFolder(dataminerFolder, "A folder collecting DataMiner experiments data and computation information"); + //((WorkspaceFolder) root.find(dataminerFolder)).setSystemFolder(true); + } else if (dataminerItems.size()>1) throw new Exception("found more than one dataminer folder (impossible!!!)"); + else dataminerFolderContainer = (FolderContainer) dataminerItems.get(0); + + + if (dataminerFolderContainer.findByName(importedDataFolder).getContainers().isEmpty()) { LOGGER.debug("Dataspace->Creating DataMiner imported data folder"); - dataminerFolderWS.createFolder(importedDataFolder, "A folder collecting DataMiner imported data"); + dataminerFolderContainer.newFolder(importedDataFolder, "A folder collecting DataMiner imported data"); } - if (!ws.exists(computedDataFolder, dataminerFolderWS.getId())) { + + if (dataminerFolderContainer.findByName(computedDataFolder).getContainers().isEmpty()) { LOGGER.debug("Dataspace->Creating DataMiner computed data folder"); - dataminerFolderWS.createFolder(computedDataFolder, "A folder collecting DataMiner computed data"); + dataminerFolderContainer.newFolder(computedDataFolder, "A folder collecting DataMiner computed data"); } - if (!ws.exists(computationsFolder, dataminerFolderWS.getId())) { + if (dataminerFolderContainer.findByName(computationsFolder).getContainers().isEmpty()) { LOGGER.debug("Dataspace->Creating DataMiner computations folder"); - dataminerFolderWS.createFolder(computationsFolder, "A folder collecting DataMiner computations information"); + dataminerFolderContainer.newFolder(computationsFolder, "A folder collecting DataMiner computations information"); } + + return dataminerFolderContainer; } - public String uploadData(StoredData data, WorkspaceFolder wsFolder) throws Exception { - return uploadData(data, wsFolder, true); + + public String uploadData(StoredData data, FolderContainer destinationFolder) throws Exception { + return uploadData(data, destinationFolder, true); } - - public String uploadData(StoredData data, WorkspaceFolder wsFolder, boolean changename) throws Exception { + + public String uploadData(StoredData data, FolderContainer destinationFolder, boolean changename) throws Exception { LOGGER.debug("Dataspace->Analysing " + data); // String filenameonwsString = WorkspaceUtil.getUniqueName(data.name, wsFolder); String filenameonwsString = data.name ; if (changename) filenameonwsString = String.format("%s_(%s)%s", data.name, data.computationId, getExtension(data.payload, data.type)); - InputStream in = null; String url = ""; try { @@ -174,11 +184,13 @@ public class DataspaceManager implements Runnable { properties.put(data_type, data.type); properties.put(payload, url); - FolderItem fileItem = WorkspaceUtil.createExternalFile(wsFolder, filenameonwsString, data.description, in,properties,data.type,size); + FileContainer fileContainer = destinationFolder.uploadFile(in, filenameonwsString, data.description); + //TODO: add proprerty to file + //FolderItem fileItem = WorkspaceUtil.createExternalFile(wsFolder, filenameonwsString, data.description, in,properties,data.type,size); //fileItem.getProperties().addProperties(properties); LOGGER.debug("Dataspace->WS OP file saved on the WS " + filenameonwsString); - url = fileItem.getPublicLink(false); + url = fileContainer.getPublicLink().toString(); LOGGER.debug("Dataspace->WS OP url produced for the file " + url); data.payload = url; @@ -202,176 +214,167 @@ public class DataspaceManager implements Runnable { return url; } - public List uploadInputData(List inputData, WorkspaceFolder dataminerFolder) throws Exception { + public List uploadInputData(List inputData, FolderContainer dataminerFolder) throws Exception { LOGGER.debug("Dataspace->uploading input data; Number of data: " + inputData.size()); - WorkspaceItem folderItem = dataminerFolder.find(importedDataFolder); + FolderContainer destinationFolder = (FolderContainer) dataminerFolder.findByName(importedDataFolder).getContainers().get(0); List urls = new ArrayList(); - if (folderItem != null && folderItem.isFolder()) { - WorkspaceFolder destinationFolder = (WorkspaceFolder) folderItem; - for (StoredData input : inputData) { - WorkspaceItem item = null; + for (StoredData input : inputData) { + List> items = null; - if (input.type.equals("text/csv")||input.type.equals("application/d4science")||input.type.equals("image/png")) - item = destinationFolder.find(input.name); + if (input.type.equals("text/csv")||input.type.equals("application/d4science")||input.type.equals("image/png")) + items = destinationFolder.findByName(input.name).getContainers(); - if (item==null){ - String url = uploadData(input, destinationFolder,false); - LOGGER.debug("Dataspace->returning property "+url); - urls.add(url); - } - else{ - LOGGER.debug("Dataspace->Input item "+input.name+" is already available in the input folder"); - String url = item.getPublicLink(false); - LOGGER.debug("Dataspace->returning WS url "+url); - urls.add(url); - } + if (items==null || items.isEmpty()){ + String url = uploadData(input, destinationFolder,false); + LOGGER.debug("Dataspace->returning property "+url); + urls.add(url); } - } else - LOGGER.debug("Dataspace->folder is not valid"); + else{ + FileContainer item = (FileContainer) items.get(0); + LOGGER.debug("Dataspace->Input item "+input.name+" is already available in the input folder"); + String url = item.getPublicLink().toString(); + LOGGER.debug("Dataspace->returning WS url "+url); + urls.add(url); + } + } LOGGER.debug("Dataspace->finished uploading input data"); return urls; } - public List uploadOutputData(List outputData, WorkspaceFolder dataminerFolder) throws Exception { + public List uploadOutputData(List outputData,FolderContainer dataminerFolder) throws Exception { LOGGER.debug("Dataspace->uploading output data; Number of data: " + outputData.size()); - WorkspaceItem folderItem = dataminerFolder.find(computedDataFolder); + FolderContainer destinationFolder = (FolderContainer)dataminerFolder.findByName(computedDataFolder).getContainers().get(0); List urls = new ArrayList(); - if (folderItem != null && folderItem.isFolder()) { - WorkspaceFolder destinationFolder = (WorkspaceFolder) folderItem; - for (StoredData output : outputData) { + for (StoredData output : outputData) { String url = uploadData(output, destinationFolder); urls.add(url); - } - } else - LOGGER.debug("Dataspace->folder is not valid"); + } LOGGER.debug("Dataspace->finished uploading output data"); return urls; } - public void uploadComputationData(ComputationData computation, List inputData, List outputData, WorkspaceFolder dataminerFolder, Workspace ws) throws Exception { + public void uploadComputationData(ComputationData computation, List inputData, List outputData, FolderContainer dataminerFolder) throws Exception { LOGGER.debug("Dataspace->uploading computation data"); - WorkspaceItem folderItem = dataminerFolder.find(computationsFolder); - if (folderItem != null && folderItem.isFolder()) { - // create a folder in here - LOGGER.debug("Dataspace->Creating computation folder " + computation.id); - WorkspaceFolder cfolder = ((WorkspaceFolder) folderItem); - String cfoldername = computation.id; - WorkspaceFolder newcomputationFolder = null; - try{ - newcomputationFolder = cfolder.createFolder(cfoldername, computation.operatorDescription); - }catch(java.lang.ClassCastException e){ - LOGGER.debug("Dataspace->concurrency exception - deleting remaining item"); - deleteRunningComputationData(); - newcomputationFolder = cfolder.createFolder(cfoldername, computation.operatorDescription); - } - //String itemType = "COMPUTATION"; - - // create IO folders - LOGGER.debug("Dataspace->creating IO folders under " + cfoldername); - newcomputationFolder.createFolder(importedDataFolder, importedDataFolder); - newcomputationFolder.createFolder(computedDataFolder, computedDataFolder); - - // copy IO in those folders - LOGGER.debug("Dataspace->*****uploading inputs in IO folder*****"); - List inputurls = uploadInputData(inputData, newcomputationFolder); - LOGGER.debug("Dataspace->*****uploading outputs in IO folder*****"); - List outputurls = uploadOutputData(outputData, newcomputationFolder); - - LOGGER.debug("Dataspace->*****adding properties to the folder*****"); - - LOGGER.debug("Dataspace->creating Folder Properties"); - - // write a computation item for the computation - LinkedHashMap properties = new LinkedHashMap(); - properties.put(computation_id, computation.id); - - properties.put(hostname, WPSConfig.getInstance().getWPSConfig().getServer().getHostname()); - - properties.put(vre, computation.vre); - - properties.put(operator_name, config.getAgent()); - - properties.put(operator_id, computation.operatorId); - - properties.put(operator_description, computation.operatorDescription); - - properties.put(start_date, computation.startDate); - - properties.put(end_date, computation.endDate); - - properties.put(status, getStatus(computation.status)); - - properties.put(execution_platform, computation.infrastructure); - - int ninput = inputurls.size(); - int noutput = outputurls.size(); - - LOGGER.debug("Dataspace->Adding input properties for " + ninput + " inputs"); - for (int i = 1; i <= ninput; i++) { - StoredData input = inputData.get(i - 1); - if (input.payload.contains("|")){ - String payload = input .payload; - LOGGER.debug("Dataspace->Managing complex input "+input.name+" : "+payload); - //delete the names that are not useful - - for (StoredData subinput:inputData){ - if (input.description.equals(subinput.description)){ - payload = payload.replace(subinput.name,subinput.payload); - subinput.name=null; - } - } - - input.name = null; - - //delete last pipe character - if (payload.endsWith("|")) - payload = payload.substring(0,payload.length()-1); - LOGGER.debug("Dataspace->Complex input after processing "+payload); - properties.put("input" + i + "_" + input.description, payload); - input.payload=payload; - - } - } - - for (int i = 1; i <= ninput; i++) { - StoredData input = inputData.get(i - 1); - if (input.name!=null){ - properties.put("input" + i + "_" + input.name, inputurls.get(i - 1)); - - } - } - - LOGGER.debug("Dataspace->Adding output properties for " + noutput + " outputs"); - for (int i = 1; i <= noutput; i++) { - properties.put("output" + i + "_" + outputData.get(i - 1).name, outputurls.get(i - 1)); - - } - - LOGGER.debug("Dataspace->Properties of the folder: " + properties); - - LOGGER.debug("Dataspace->Saving properties to ProvO XML file " + noutput + " outputs"); - - /* - * XStream xstream = new XStream(); String xmlproperties = xstream.toXML(properties); - */ - try { - String xmlproperties = ProvOGenerator.toProvO(computation, inputData, outputData); - - File xmltosave = new File(config.getPersistencePath(), "prov_o_" + UUID.randomUUID()); - FileTools.saveString(xmltosave.getAbsolutePath(), xmlproperties, true, "UTF-8"); - InputStream sis = new FileInputStream(xmltosave); - WorkspaceUtil.createExternalFile(newcomputationFolder, computation.id + ".xml", computation.operatorDescription, sis,null,"text/xml",xmltosave.length()); - sis.close(); - xmltosave.delete(); - } catch (Exception e) { - LOGGER.error("Dataspace->Failed creating ProvO XML file ",e); - } - //List scopes = new ArrayList(); - //scopes.add(config.getGcubeScope()); - //ws.createGcubeItem(computation.id, computation.operatorDescription, scopes, computation.user, itemType, properties, newcomputationFolder.getId()); - newcomputationFolder.getProperties().addProperties(properties); + FolderContainer computationContainer = (FolderContainer) dataminerFolder.findByName(computationsFolder).getContainers().get(0); + // create a folder in here + LOGGER.debug("Dataspace->Creating computation folder " + computation.id); + String cfoldername = computation.id; + FolderContainer newcomputationFolder = null; + try{ + newcomputationFolder = computationContainer.newFolder(cfoldername, computation.operatorDescription); + }catch(java.lang.ClassCastException e){ + LOGGER.debug("Dataspace->concurrency exception - deleting remaining item"); + deleteRunningComputationData(); + newcomputationFolder = computationContainer.newFolder(cfoldername, computation.operatorDescription); } + //String itemType = "COMPUTATION"; + + // create IO folders + LOGGER.debug("Dataspace->creating IO folders under " + cfoldername); + newcomputationFolder.newFolder(importedDataFolder, importedDataFolder); + newcomputationFolder.newFolder(computedDataFolder, computedDataFolder); + + // copy IO in those folders + LOGGER.debug("Dataspace->*****uploading inputs in IO folder*****"); + List inputurls = uploadInputData(inputData, newcomputationFolder); + LOGGER.debug("Dataspace->*****uploading outputs in IO folder*****"); + List outputurls = uploadOutputData(outputData, newcomputationFolder); + + LOGGER.debug("Dataspace->*****adding properties to the folder*****"); + + LOGGER.debug("Dataspace->creating Folder Properties"); + + // write a computation item for the computation + Map properties = new LinkedHashMap(); + properties.put(computation_id, computation.id); + + properties.put(hostname, WPSConfig.getInstance().getWPSConfig().getServer().getHostname()); + + properties.put(vre, computation.vre); + + properties.put(operator_name, config.getAgent()); + + properties.put(operator_id, computation.operatorId); + + properties.put(operator_description, computation.operatorDescription); + + properties.put(start_date, computation.startDate); + + properties.put(end_date, computation.endDate); + + properties.put(status, getStatus(computation.status)); + + properties.put(execution_platform, computation.infrastructure); + + int ninput = inputurls.size(); + int noutput = outputurls.size(); + + LOGGER.debug("Dataspace->Adding input properties for " + ninput + " inputs"); + for (int i = 1; i <= ninput; i++) { + StoredData input = inputData.get(i - 1); + if (input.payload.contains("|")){ + String payload = input .payload; + LOGGER.debug("Dataspace->Managing complex input "+input.name+" : "+payload); + //delete the names that are not useful + + for (StoredData subinput:inputData){ + if (input.description.equals(subinput.description)){ + payload = payload.replace(subinput.name,subinput.payload); + subinput.name=null; + } + } + + input.name = null; + + //delete last pipe character + if (payload.endsWith("|")) + payload = payload.substring(0,payload.length()-1); + LOGGER.debug("Dataspace->Complex input after processing "+payload); + properties.put("input" + i + "_" + input.description, payload); + input.payload=payload; + + } + } + + for (int i = 1; i <= ninput; i++) { + StoredData input = inputData.get(i - 1); + if (input.name!=null){ + properties.put(String.format("input%d_%s",i, input.name), inputurls.get(i - 1)); + + } + } + + LOGGER.debug("Dataspace->Adding output properties for " + noutput + " outputs"); + for (int i = 1; i <= noutput; i++) { + properties.put(String.format("output%d_%s",i,outputData.get(i - 1).name), outputurls.get(i - 1)); + + } + + LOGGER.debug("Dataspace->Properties of the folder: " + properties); + + LOGGER.debug("Dataspace->Saving properties to ProvO XML file " + noutput + " outputs"); + + /* + * XStream xstream = new XStream(); String xmlproperties = xstream.toXML(properties); + */ + try { + String xmlproperties = ProvOGenerator.toProvO(computation, inputData, outputData); + + File xmltosave = new File(config.getPersistencePath(), "prov_o_" + UUID.randomUUID()); + FileTools.saveString(xmltosave.getAbsolutePath(), xmlproperties, true, "UTF-8"); + try(InputStream sis = new FileInputStream(xmltosave)){ + newcomputationFolder.uploadFile(sis,computation.id + ".xml", computation.operatorDescription); + } + xmltosave.delete(); + } catch (Exception e) { + LOGGER.error("Dataspace->Failed creating ProvO XML file ",e); + } + //List scopes = new ArrayList(); + //scopes.add(config.getGcubeScope()); + //ws.createGcubeItem(computation.id, computation.operatorDescription, scopes, computation.user, itemType, properties, newcomputationFolder.getId()); + newcomputationFolder.setMetadata(new Metadata(properties)); + LOGGER.debug("Dataspace->finished uploading computation data"); } @@ -389,23 +392,14 @@ public class DataspaceManager implements Runnable { public void writeProvenance(ComputationData computation, List inputData, List outputData) throws Exception { LOGGER.debug("Dataspace->connecting to Workspace"); - HomeManagerFactory factory = HomeLibrary.getHomeManagerFactory(); - HomeManager manager = factory.getHomeManager(); - LOGGER.debug("Dataspace->getting user"); - User user = manager.createUser(computation.user); - Home home = manager.getHome(user); - LOGGER.debug("Dataspace->getting root folder"); - Workspace ws = home.getWorkspace(); - WorkspaceFolder root = ws.getRoot(); LOGGER.debug("Dataspace->create folders network"); - createFoldersNetwork(ws, root); - WorkspaceFolder dataminerItem = (WorkspaceFolder) root.find(dataminerFolder); + FolderContainer dataminerFolder = createFoldersNetwork(); LOGGER.debug("Dataspace->****uploading input files****"); - uploadInputData(inputData, dataminerItem); + uploadInputData(inputData, dataminerFolder); LOGGER.debug("Dataspace->****uploading output files****"); - uploadOutputData(outputData, dataminerItem); + uploadOutputData(outputData, dataminerFolder); LOGGER.debug("Dataspace->****uploading computation files****"); - uploadComputationData(computation, inputData, outputData, dataminerItem, ws); + uploadComputationData(computation, inputData, outputData, dataminerFolder); LOGGER.debug("Dataspace->provenance management finished"); LOGGER.debug("Dataspace->deleting generated files"); AbstractEcologicalEngineMapper.deleteGeneratedFiles(generatedFiles); @@ -418,27 +412,19 @@ public class DataspaceManager implements Runnable { } catch (Exception e) { LOGGER.debug("Dataspace->impossible to delete running computation : {} ",e.getMessage()); } - // LOGGER.debug("Dataspace->updating computation status"); - // LOGGER.debug("Dataspace->connecting to Workspace"); - HomeManagerFactory factory = HomeLibrary.getHomeManagerFactory(); - HomeManager manager = factory.getHomeManager(); - // LOGGER.debug("Dataspace->getting user"); - User user = manager.createUser(computation.user); - Home home = manager.getHome(user); - // LOGGER.debug("Dataspace->getting root folder"); - Workspace ws = home.getWorkspace(); - WorkspaceFolder root = ws.getRoot(); + StorageHubClient shc = new StorageHubClient(); + // LOGGER.debug("Dataspace->create folders network"); - createFoldersNetwork(ws, root); - WorkspaceFolder dataminerFolderWS = (WorkspaceFolder) root.find(dataminerFolder); - WorkspaceItem computationsFolderItem = dataminerFolderWS.find(computationsFolder); + FolderContainer folderContainer = createFoldersNetwork(); + + FolderContainer computationsContainer = (FolderContainer) folderContainer.findByName(computationsFolder).getContainers().get(0); // LOGGER.debug("Dataspace->Creating computation item " + computation.id+" with status"+computation.status); String itemType = "COMPUTATION"; - - - + + + // write a computation item for the computation - LinkedHashMap properties = new LinkedHashMap(); + Map properties = new LinkedHashMap(); properties.put(computation_id, computation.id); properties.put(hostname, WPSConfig.getInstance().getWPSConfig().getServer().getHostname()); properties.put(vre, computation.vre); @@ -454,7 +440,15 @@ public class DataspaceManager implements Runnable { List scopes = new ArrayList(); scopes.add(config.getGcubeScope()); - ws.createGcubeItem(computation.id, computation.operatorDescription, scopes, computation.user, itemType, properties, computationsFolderItem.getId()); + GCubeItem gcubeItem = new GCubeItem(); + gcubeItem.setName(computation.id); + gcubeItem.setDescription(computation.operatorDescription); + gcubeItem.setScopes(scopes.toArray(new String[scopes.size()])); + gcubeItem.setItemType(itemType); + gcubeItem.setProperty(new Metadata(properties)); + + computationsContainer.newGcubeItem(gcubeItem); + LOGGER.debug("Dataspace->finished uploading computation data"); } @@ -481,26 +475,20 @@ public class DataspaceManager implements Runnable { LOGGER.debug("Dataspace->deleting computation item"); LOGGER.debug("Dataspace->connecting to Workspace"); - HomeManagerFactory factory = HomeLibrary.getHomeManagerFactory(); - HomeManager manager = factory.getHomeManager(); - LOGGER.debug("Dataspace->getting user"); - User user = manager.createUser(computation.user); - Home home = manager.getHome(user); - LOGGER.debug("Dataspace->getting root folder"); - Workspace ws = home.getWorkspace(); - WorkspaceFolder root = ws.getRoot(); - WorkspaceFolder dataminerFolderWS = (WorkspaceFolder) root.find(dataminerFolder); - WorkspaceItem computationsFolderItem = dataminerFolderWS.find(computationsFolder); + StorageHubClient shc = new StorageHubClient(); + FolderContainer dataminerContainer = (FolderContainer) shc.getWSRoot().findByName(dataminerFolder).getContainers().get(0); + FolderContainer computationContainer = (FolderContainer) dataminerContainer.findByName(computationsFolder).getContainers().get(0); LOGGER.debug("Dataspace->removing computation data"); - WorkspaceFolder computationsFolderWs = ((WorkspaceFolder) computationsFolderItem); - WorkspaceItem wi = computationsFolderWs.find(computation.id); - if (wi!=null){ - LOGGER.debug("Dataspace->Found "+computation.id+" under "+computationsFolderWs.getName()+" - removing"); - wi.remove(); + + List> wi = computationContainer.findByName(computation.id).getContainers(); + if (wi.isEmpty()){ + for (ItemContainer container : wi) + container.delete(); } else - LOGGER.debug("Dataspace->Warning Could not find "+computation.id+" under "+computationsFolderWs.getName()); + LOGGER.debug("Dataspace->Warning Could not find "+computation.id+" under "+computationContainer.get().getName()); + /*TODO: ASK GIANPAOLO int maxtries = 3; int i =1; while (ws.exists(computation.id,computationsFolderWs.getId()) && ifinished removing computation data - success "+!ws.exists(computation.id,computationsFolderWs.getId())); + LOGGER.debug("Dataspace->finished removing computation data "); } public static String getExtension(String payload, String type){