git-svn-id: https://svn.d4science.research-infrastructures.eu/gcube/trunk/data-analysis/data-miner-manager-cl@179802 82a268e6-3cf1-43bd-a215-b396298e98cf
This commit is contained in:
parent
924ecdbdb9
commit
54dacbf31c
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@ -15,23 +15,6 @@ import java.util.LinkedHashMap;
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import java.util.List;
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import java.util.Map;
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import net.opengis.ows.x11.OperationDocument.Operation;
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import net.opengis.wps.x100.CapabilitiesDocument;
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import net.opengis.wps.x100.ComplexDataType;
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import net.opengis.wps.x100.ExecuteDocument;
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import net.opengis.wps.x100.ExecuteResponseDocument;
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import net.opengis.wps.x100.ExecuteResponseDocument.ExecuteResponse.ProcessOutputs;
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import net.opengis.wps.x100.InputDescriptionType;
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import net.opengis.wps.x100.InputType;
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import net.opengis.wps.x100.OutputDataType;
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import net.opengis.wps.x100.OutputDescriptionType;
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import net.opengis.wps.x100.ProcessBriefType;
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import net.opengis.wps.x100.ProcessDescriptionType;
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import net.opengis.wps.x100.ResponseDocumentType;
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import net.opengis.wps.x100.StatusType;
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import net.opengis.wps.x100.SupportedComplexDataInputType;
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import net.opengis.wps.x100.impl.ExecuteResponseDocumentImpl;
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import org.apache.xmlbeans.XmlString;
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import org.gcube.data.analysis.dataminermanagercl.server.dmservice.wps.ProcessInformations;
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import org.gcube.data.analysis.dataminermanagercl.server.dmservice.wps.ResponseWPS;
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@ -70,6 +53,23 @@ import org.w3c.dom.NamedNodeMap;
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import org.w3c.dom.Node;
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import org.w3c.dom.NodeList;
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import net.opengis.ows.x11.OperationDocument.Operation;
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import net.opengis.wps.x100.CapabilitiesDocument;
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import net.opengis.wps.x100.ComplexDataType;
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import net.opengis.wps.x100.ExecuteDocument;
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import net.opengis.wps.x100.ExecuteResponseDocument;
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import net.opengis.wps.x100.ExecuteResponseDocument.ExecuteResponse.ProcessOutputs;
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import net.opengis.wps.x100.InputDescriptionType;
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import net.opengis.wps.x100.InputType;
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import net.opengis.wps.x100.OutputDataType;
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import net.opengis.wps.x100.OutputDescriptionType;
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import net.opengis.wps.x100.ProcessBriefType;
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import net.opengis.wps.x100.ProcessDescriptionType;
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import net.opengis.wps.x100.ResponseDocumentType;
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import net.opengis.wps.x100.StatusType;
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import net.opengis.wps.x100.SupportedComplexDataInputType;
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import net.opengis.wps.x100.impl.ExecuteResponseDocumentImpl;
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/**
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* Client 4 WPS Service
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*
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@ -224,12 +224,11 @@ public class SClient4WPS extends SClient {
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}
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}
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@Override
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public Operator getOperatorById(String id) throws Exception {
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return getOperatorById(id, false);
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}
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@Override
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public Operator getOperatorById(String id, boolean refresh) throws Exception {
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if (id == null || id.isEmpty()) {
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@ -278,18 +277,18 @@ public class SClient4WPS extends SClient {
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public List<OperatorsClassification> getOperatorsClassifications() throws ServiceException {
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return getOperatorsClassifications(false);
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}
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@Override
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public List<OperatorsClassification> getOperatorsClassifications(boolean refresh) throws ServiceException{
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logger.debug("getOperatorsClassifications: "+refresh);
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public List<OperatorsClassification> getOperatorsClassifications(boolean refresh) throws ServiceException {
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logger.debug("getOperatorsClassifications: " + refresh);
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LinkedHashMap<String, String> operatorsToCategoriesMap = new LinkedHashMap<>();
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LinkedHashMap<String, List<Operator>> categoriesToOperatorsMap = new LinkedHashMap<>();
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if(refresh){
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if (refresh) {
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logger.debug("Clear Processes Descriptions: Refresh");
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process.clear();
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}
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requestCapability(refresh);
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if (processesBriefs == null || processesDescriptionType == null) {
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throw new ServiceException("Algorithms WPS not available!");
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@ -373,7 +372,6 @@ public class SClient4WPS extends SClient {
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logger.debug("OperatorClass: " + operatorsClass);
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return operatorsClass;
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}
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private ProcessInformations describeProcess(String processId) throws ServiceException {
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return describeProcess(processId, null);
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@ -429,7 +427,7 @@ public class SClient4WPS extends SClient {
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return processInformations;
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} catch (Throwable e) {
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logger.error(e.getLocalizedMessage(),e);
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logger.error(e.getLocalizedMessage(), e);
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throw new ServiceException(e.getLocalizedMessage(), e);
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} finally {
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wpsClient.disconnect(wpsProcessingServlet);
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@ -440,13 +438,13 @@ public class SClient4WPS extends SClient {
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SClient4WPSSession wpsClient = null;
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processesDescriptionType = null;
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processesBriefs = null;
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logger.debug("Request Capability: refresh="+refresh);
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logger.debug("Request Capability: refresh=" + refresh);
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try {
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wpsClient = createWPSClientSession();
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wpsClient.connect(wpsProcessingServlet,refresh);
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wpsClient.connect(wpsProcessingServlet, refresh);
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processesDescriptionType = wpsClient.getAllProcessDescriptions(wpsProcessingServlet);
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@ -483,8 +481,13 @@ public class SClient4WPS extends SClient {
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for (OutputDescriptionType odt : odts) {
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// executeBuilder.setMimeTypeForOutput("text/xml",
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// "result");
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if (odt.isSetComplexOutput())
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if (odt.isSetComplexOutput()) {
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executeBuilder.setMimeTypeForOutput("text/xml", odt.getIdentifier().getStringValue());
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if (odt.getIdentifier().getStringValue().compareTo("non_deterministic_output") != 0) {
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executeBuilder.setAsReference(odt.getIdentifier().getStringValue(), true);
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}
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}
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}
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} catch (Exception e) {
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logger.debug("Execute Process-> Warning, no xml structured objects will be provided: "
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@ -506,6 +509,14 @@ public class SClient4WPS extends SClient {
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documentType.setStoreExecuteResponse(true);
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documentType.setStatus(true);
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documentType.setLineage(false);
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/*
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* DocumentOutputDefinitionType[]
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* documentOutputDefinitionType=documentType.getOutputArray();
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* for(DocumentOutputDefinitionType
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* dodt:documentOutputDefinitionType){
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* dodt.getIdentifier().getStringValue()
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* dodt.setAsReference(true); }
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*/
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execute.getExecute().getResponseForm().setResponseDocument(documentType);
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}
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Object responseObject = wpsClient.execute(wpsProcessingServlet, execute);
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@ -948,7 +959,7 @@ public class SClient4WPS extends SClient {
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return statusLocation;
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} catch (Throwable e) {
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logger.error(e.getLocalizedMessage(),e);
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logger.error(e.getLocalizedMessage(), e);
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throw new ServiceException(e.getLocalizedMessage(), e);
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}
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}
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@ -1060,7 +1071,7 @@ public class SClient4WPS extends SClient {
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}
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} catch (Throwable e) {
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logger.error("MonitorProcess: " + e.getLocalizedMessage(),e);
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logger.error("MonitorProcess: " + e.getLocalizedMessage(), e);
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throw new ServiceException(e.getLocalizedMessage(), e);
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} finally {
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wpsClient.disconnect(wpsProcessingServlet);
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@ -1109,135 +1120,155 @@ public class SClient4WPS extends SClient {
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for (OutputDataType out : outputData) {
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String outputID = out.getIdentifier().getStringValue();
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String value = "";
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if (out.getData().isSetLiteralData()) {
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value = out.getData().getLiteralData().getStringValue();
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Parameter paramLiteral = outputParameters.get(outputID);
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if (paramLiteral != null) {
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paramLiteral.setValue(value);
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logger.debug("Output Identifier: " + outputID);
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if (out.isSetData()) {
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logger.debug("Is Data");
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readOutputOfTypeData(outputParameters, outputResource, out, outputID);
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} else {
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if(out.isSetReference()){
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logger.debug("Is Reference: "+out.getReference());
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logger.debug("This parameter is not recovered");
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} else {
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logger.debug("Unknow type, this parameter is not recovered");
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}
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}
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}
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}
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}
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private void readOutputOfTypeData(Map<String, Parameter> outputParameters, Map<String, Resource> outputResource,
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OutputDataType out, String outputID) {
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String value = "";
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if (out.getData().isSetLiteralData()) {
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logger.debug("Is Literal Data");
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value = out.getData().getLiteralData().getStringValue();
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Parameter paramLiteral = outputParameters.get(outputID);
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if (paramLiteral != null) {
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paramLiteral.setValue(value);
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logger.debug("Assigning value: " + value + " to output named: " + outputID);
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Resource resource = new ObjectResource(outputID, paramLiteral.getName(),
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paramLiteral.getDescription(), paramLiteral.getValue());
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outputResource.put(outputID, resource);
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}
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} else {
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if (out.getData().isSetComplexData()) {
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logger.debug("Is Complex Data");
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if (out.getReference() != null) {
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value = out.getReference().getHref();
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Parameter paramComplexData = outputParameters.get(outputID);
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if (paramComplexData != null) {
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paramComplexData.setValue(value);
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logger.debug("Assigning value: " + value + " to output named: " + outputID);
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Resource resource = new ObjectResource(outputID, paramLiteral.getName(),
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paramLiteral.getDescription(), paramLiteral.getValue());
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Resource resource = new ObjectResource(outputID, paramComplexData.getName(),
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paramComplexData.getDescription(), paramComplexData.getValue());
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outputResource.put(outputID, resource);
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}
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} else {
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if (out.getData().isSetComplexData()) {
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if (out.getReference() != null) {
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value = out.getReference().getHref();
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Parameter paramComplexData = outputParameters.get(outputID);
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if (paramComplexData != null) {
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paramComplexData.setValue(value);
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logger.debug("Assigning value: " + value + " to output named: " + outputID);
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Resource resource = new ObjectResource(outputID, paramComplexData.getName(),
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paramComplexData.getDescription(), paramComplexData.getValue());
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outputResource.put(outputID, resource);
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}
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} else
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// remove the element name, which is not useful
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outputParameters.remove(outputID);
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} else
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// remove the element name, which is not useful
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outputParameters.remove(outputID);
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ComplexDataType cdt = out.getData().getComplexData();
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LinkedHashMap<String, ResponseWPS> urls = retrieveURLsFromWPSResponse(cdt);
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ComplexDataType cdt = out.getData().getComplexData();
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LinkedHashMap<String, ResponseWPS> urls = retrieveURLsFromWPSResponse(cdt);
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for (String key : urls.keySet()) {
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logger.debug("Adding OBJ:" + key);
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ResponseWPS responseWPS = urls.get(key);
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ObjectParameter objP = new ObjectParameter(key, responseWPS.getDescription(),
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String.class.getName(), " ");
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objP.setValue(responseWPS.getData());
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logger.debug("ObjectParameter: " + objP);
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outputParameters.put(key, objP);
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if (responseWPS != null && responseWPS.getMimeType() != null) {
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Resource resource;
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switch (responseWPS.getMimeType()) {
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case "image/bmp":
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case "image/gif":
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case "image/jpeg":
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case "image/png":
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resource = new ImageResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType());
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for (String key : urls.keySet()) {
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logger.debug("Adding OBJ:" + key);
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ResponseWPS responseWPS = urls.get(key);
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ObjectParameter objP = new ObjectParameter(key, responseWPS.getDescription(),
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String.class.getName(), " ");
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objP.setValue(responseWPS.getData());
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logger.debug("ObjectParameter: " + objP);
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outputParameters.put(key, objP);
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if (responseWPS != null && responseWPS.getMimeType() != null) {
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Resource resource;
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switch (responseWPS.getMimeType()) {
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case "image/bmp":
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case "image/gif":
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case "image/jpeg":
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case "image/png":
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resource = new ImageResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType());
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outputResource.put(key, resource);
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break;
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case "text/csv":
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if (responseWPS.getData() != null && !responseWPS.getData().isEmpty()) {
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if (responseWPS.getData().startsWith("http:")
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|| responseWPS.getData().startsWith("https:")
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|| responseWPS.getData().startsWith("smp:")) {
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Parameter complexParameter = outputParameters.get(outputID);
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if (complexParameter instanceof FileParameter) {
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FileParameter fileParameter = (FileParameter) complexParameter;
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if (fileParameter.isNetcdf()) {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), true);
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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outputResource.put(key, resource);
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
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break;
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case "text/csv":
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if (responseWPS.getData() != null && !responseWPS.getData().isEmpty()) {
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if (responseWPS.getData().startsWith("http:")
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|| responseWPS.getData().startsWith("https:")
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|| responseWPS.getData().startsWith("smp:")) {
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Parameter complexParameter = outputParameters.get(outputID);
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if (complexParameter instanceof FileParameter) {
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FileParameter fileParameter = (FileParameter) complexParameter;
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if (fileParameter.isNetcdf()) {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), true);
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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outputResource.put(key, resource);
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
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}
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
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}
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break;
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default:
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if (responseWPS.getData() != null && !responseWPS.getData().isEmpty()) {
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if (responseWPS.getData().startsWith("http:")
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|| responseWPS.getData().startsWith("https:")
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|| responseWPS.getData().startsWith("smp:")) {
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Parameter complexParameter = outputParameters.get(outputID);
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if (complexParameter instanceof FileParameter) {
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FileParameter fileParameter = (FileParameter) complexParameter;
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if (fileParameter.isNetcdf()) {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), true);
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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outputResource.put(key, resource);
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
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}
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
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}
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break;
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}
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
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}
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break;
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default:
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if (responseWPS.getData() != null && !responseWPS.getData().isEmpty()) {
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if (responseWPS.getData().startsWith("http:")
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|| responseWPS.getData().startsWith("https:")
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|| responseWPS.getData().startsWith("smp:")) {
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Parameter complexParameter = outputParameters.get(outputID);
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if (complexParameter instanceof FileParameter) {
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FileParameter fileParameter = (FileParameter) complexParameter;
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if (fileParameter.isNetcdf()) {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), true);
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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} else {
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resource = new FileResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData(),
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responseWPS.getMimeType(), false);
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}
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outputResource.put(key, resource);
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} else {
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resource = new ObjectResource(key, responseWPS.getDescription(),
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responseWPS.getDescription(), responseWPS.getData());
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outputResource.put(key, resource);
|
||||
}
|
||||
} else {
|
||||
resource = new ObjectResource(key, responseWPS.getDescription(),
|
||||
responseWPS.getDescription(), responseWPS.getData());
|
||||
outputResource.put(key, resource);
|
||||
}
|
||||
break;
|
||||
}
|
||||
} else {
|
||||
value = out.getData().getLiteralData().getStringValue();
|
||||
|
||||
}
|
||||
}
|
||||
} else {
|
||||
logger.debug("Not is Literal or Complex");
|
||||
value = out.getData().getLiteralData().getStringValue();
|
||||
|
||||
}
|
||||
}
|
||||
}
|
||||
|
|
|
|||
Loading…
Reference in New Issue