diff --git a/templates/da_cache_to_shub.json.j2 b/templates/da_cache_to_shub.json.j2
index e4ef02b..983e5ca 100644
--- a/templates/da_cache_to_shub.json.j2
+++ b/templates/da_cache_to_shub.json.j2
@@ -8,9 +8,9 @@
"inputParameters" : ["token", "descriptor"],
"tasks" : [
{
- "name": "LAMBDA_TASK",
+ "name": "INLINE_TASK",
"taskReferenceName": "init",
- "type": "LAMBDA",
+ "type": "INLINE",
"inputParameters": {
"downloads" : "${workflow.input.descriptor.downloads.*}",
"storagehub" : "{{ storagehub }}",
@@ -21,7 +21,8 @@
"folder" : "${workflow.input.descriptor.userOrderName}-${workflow.input.descriptor.orderNumber}",
"bcc" : ["prog@maris.nl","orchestrator@d4science.org"],
"max_download_size" : 16106127360,
- "scriptExpression": "return { folder : $.folder.replace(/[<>&:/|?%\\[\\]\\\\]/g,' ').trim()}"
+ "evaluatorType" : "javascript",
+ "expression": "function f(){return { folder : $.folder.replace(/[<>&:/|?%\\[\\]\\\\]/g,' ').trim()}} f()"
}
},
{
@@ -40,12 +41,13 @@
"retryDelaySeconds": 10
},
{
- "name": "LAMBDA_TASK",
+ "name": "INLINE_TASK",
"taskReferenceName": "init2",
- "type": "LAMBDA",
+ "type": "INLINE",
"inputParameters": {
"workspace_root_folder_id" : "${get_workspace.output.body.item.id}",
- "scriptExpression": "1 === 1"
+ "evaluatorType" : "javascript",
+ "expression": "1 === 1"
}
},
{
@@ -68,8 +70,9 @@
"inputParameters": {
"folders": "${check_folder.output.response.body.itemlist}"
},
- "type": "DECISION",
- "caseExpression": "($.folders.length === 0 ? 'create' : 'exists')",
+ "type": "SWITCH",
+ "evaluatorType" : "javascript",
+ "expression": "($.folders.length === 0 ? 'create' : 'exists')",
"decisionCases": {
"create": [
{
@@ -135,8 +138,9 @@
"folders": "${check_destination_folder.output.body.itemlist}",
"status": "${check_destination_folder.output.status}"
},
- "type": "DECISION",
- "caseExpression": "((($.folders && $.folders.length === 0) || $.status === 404) ? 'create' : 'exists')",
+ "type": "SWITCH",
+ "evaluatorType" : "javascript",
+ "expression": "((($.folders && $.folders.length === 0) || $.status === 404) ? 'create' : 'exists')",
"decisionCases": {
"create": [
{
@@ -198,16 +202,17 @@
}
},
{
- "name": "LAMBDA_TASK",
+ "name": "INLINE_TASK",
"taskReferenceName": "build_transfer_tasks",
- "type": "LAMBDA",
+ "type": "INLINE",
"inputParameters": {
"downloads" : "${workflow.input.descriptor.downloads.*}",
"upload" : "${init.input.storagehub}/workspace/items/${workflow.variables.target_folder_id}/create/ARCHIVE",
"auth" : "Bearer ${workflow.input.token}",
"description" : "${workflow.input.descriptor.userOrderName}",
"max" : "${init.input.max_download_size}",
- "scriptExpression": "inputs={};tasks=[];rejected=[];for(var i=0;i<$.downloads.length;i++) if($.downloads[i].size > $.max) rejected.push($.downloads[i]); else download=$.downloads[i],tasks.push({name:'pyrestbridge',type:'SIMPLE',taskReferenceName:'downloads_'+i}),inputs['downloads_'+i]={ fail : false, datamap : { place: 'files', name : 'file'}, endpoint1 : { url: download.url}, endpoint2 : { url: $.upload, headers: { Authorization : $.auth}, files: { parentFolderName : 'download_' + download.number}} };return {tasks:Java.to(tasks,'java.util.Map[]'),rejected:Java.to(rejected,'java.util.Map[]'),inputs:inputs};"
+ "evaluatorType" : "javascript",
+ "expression": "inputs={};tasks=[];rejected=[];function f(){for(var i=0;i<$.downloads.length;i++) if($.downloads[i].size > $.max) rejected.push($.downloads[i]); else download=$.downloads[i],tasks.push({name:'pyrestbridge',type:'SIMPLE',taskReferenceName:'downloads_'+i}),inputs['downloads_'+i]={ fail : false, datamap : { place: 'files', name : 'file'}, endpoint1 : { url: download.url}, endpoint2 : { url: $.upload, headers: { Authorization : $.auth}, files: { parentFolderName : 'download_' + download.number}} };return {tasks:Java.to(tasks,'java.util.Map[]'),rejected:Java.to(rejected,'java.util.Map[]'),inputs:inputs};} f()"
}
},
{
@@ -233,14 +238,15 @@
"forkTasks" : [
[
{
- "name": "LAMBDA_TASK",
+ "name": "INLINE_TASK",
"taskReferenceName": "build_json_report",
- "type": "LAMBDA",
+ "type": "INLINE",
"inputParameters": {
"input" : "${workflow.input.descriptor}",
"output" : "${join_parallel_downloads.output}",
"rejected" : "${build_transfer_tasks.output.result.rejected}",
- "scriptExpression": "var k,report={requestId:$.input.requestId,orderNumber:$.input.orderNumber,errors:[]},keys=[],errors=[];for(var k in $.output) keys.push(k);keys.sort();for(k in keys){var index=keys[k].split('_')[1],o=$.output[keys[k]];o.endpoint1.error&&errors.push({url:$.input.downloads[index].url,number:index,error_number:1002,error_message:o.endpoint1.error}),o.endpoint2.error&&errors.push({url:$.input.downloads[index].url,number:index,error_number:9999,error_message:o.endpoint2.error})};for(var r=0; r< $.rejected.length;r++) errors.push({url:$.rejected[r].url,number:$.rejected[r].number,error_number:9999,error_message:'Rejected because size is larger than allowed (16GB)'});report['errors']=Java.to(errors,'java.util.Map[]');return {report:report}"
+ "evaluatorType" : "javascript",
+ "expression": "var k,report={requestId:$.input.requestId,orderNumber:$.input.orderNumber,errors:[]},keys=[],errors=[];for(var k in $.output) keys.push(k);keys.sort();for(k in keys){var index=keys[k].split('_')[1],o=$.output[keys[k]];o.endpoint1.error&&errors.push({url:$.input.downloads[index].url,number:index,error_number:1002,error_message:o.endpoint1.error}),o.endpoint2.error&&errors.push({url:$.input.downloads[index].url,number:index,error_number:9999,error_message:o.endpoint2.error})};for(var r=0; r< $.rejected.length;r++) errors.push({url:$.rejected[r].url,number:$.rejected[r].number,error_number:9999,error_message:'Rejected because size is larger than allowed (16GB)'});report['errors']=Java.to(errors,'java.util.Map[]');function f(){return {report:report}} f()"
}
},
{
@@ -279,22 +285,24 @@
],
[
{
- "name": "LAMBDA_TASK",
+ "name": "INLINE_TASK",
"taskReferenceName": "build_email_report",
- "type": "LAMBDA",
+ "type": "INLINE",
"inputParameters": {
"input" : "${workflow.input.descriptor}",
"output" : "${join_parallel_downloads.output}",
- "scriptExpression": "var k,report='
Download | Outcome |
',keys=[];for(var k in $.output) keys.push(k);keys.sort();for(k in keys){var index=keys[k].split('_')[1];report+=''+(Number(index)+1)+' | ';var o=$.output[keys[k]];o.endpoint1.error||o.endpoint2.error?report+=''+(o.endpoint1.error||'')+(o.endpoint2.error||'')+' | ':report+='OK | ',report+='
'}report+='
';return { report : report}"
+ "evaluatorType" : "javascript",
+ "expression": "var k,report='Download | Outcome |
',keys=[];for(var k in $.output) keys.push(k);keys.sort();for(k in keys){var index=keys[k].split('_')[1];report+=''+(Number(index)+1)+' | ';var o=$.output[keys[k]];o.endpoint1.error||o.endpoint2.error?report+=''+(o.endpoint1.error||'')+(o.endpoint2.error||'')+' | ':report+='OK | ',report+='
'}report+='
'; function f(){return { report : report}} f()"
}
},
{
- "name": "LAMBDA_TASK",
+ "name": "INLINE_TASK",
"taskReferenceName": "build_rejected_email_report",
- "type": "LAMBDA",
+ "type": "INLINE",
"inputParameters": {
"rejected" : "${build_transfer_tasks.output.result.rejected}",
- "scriptExpression": "if($.rejected.length === 0) return {report: ''}; var k,report='REJECTED:
Download | Rejection reason |
';for(var r=0; r< $.rejected.length;r++){report+=''+$.rejected[r].number+' | '+$.rejected[r].size+' bytes exceeds maximum allowed of 15Gb. |
'}report+='
';return { report : report}"
+ "evaluatorType" : "javascript",
+ "expression": "function f(){if($.rejected.length === 0) return {report: ''}; var k,report='REJECTED:
Download | Rejection reason |
';for(var r=0; r< $.rejected.length;r++){report+=''+$.rejected[r].number+' | '+$.rejected[r].size+' bytes exceeds maximum allowed of 15Gb. |
'}report+='
';return { report : report}} f()"
}
},
{