From e0ef35a8a7e70838d3dfce61443e6e54b50b092e Mon Sep 17 00:00:00 2001 From: Massimiliano Assante Date: Tue, 9 Apr 2019 08:24:45 +0000 Subject: [PATCH] Initial import. git-svn-id: https://svn.research-infrastructures.eu/d4science/gcube/branches/portlets/user/PerformFISH-Apps/1.3@178929 82a268e6-3cf1-43bd-a215-b396298e98cf --- .classpath | 33 - .project | 38 - .settings/.jsdtscope | 13 - .settings/org.eclipse.core.resources.prefs | 5 - .settings/org.eclipse.jdt.core.prefs | 14 - .settings/org.eclipse.jst.jsp.core.prefs | 3 - .settings/org.eclipse.m2e.core.prefs | 4 - .settings/org.eclipse.wst.common.component | 10 - ...se.wst.common.project.facet.core.prefs.xml | 7 - ....eclipse.wst.common.project.facet.core.xml | 9 - ...rg.eclipse.wst.jsdt.ui.superType.container | 1 - .../org.eclipse.wst.jsdt.ui.superType.name | 1 - .settings/org.eclipse.wst.validation.prefs | 2 - .tern-project | 23 - distro/LICENSE | 1 - distro/README | 62 - distro/changelog.xml | 10 - distro/descriptor.xml | 31 - distro/profile.xml | 25 - pom.xml | 239 ---- .../AddNewCompanyOrAssociation.java | 152 --- .../AssociateCompaniesToAssociation.java | 102 -- .../performfish/AssociateUsersToCompany.java | 126 -- .../performfish/AssociateUsersToFarm.java | 110 -- .../performfish/AssociationDashboard.java | 71 -- .../performfish/CompanyFarmRepository.java | 477 -------- ...panyFarmRepositoryConfigurationAction.java | 30 - .../performfish/CompanyPrivateRepository.java | 195 --- .../EmptyFormsConfigurationAction.java | 30 - .../EmptyFormsDocumentsDisplay.java | 220 ---- .../user/performfish/ManageAssociations.java | 71 -- .../user/performfish/ManageCompanies.java | 111 -- .../user/performfish/ManageCompanyAdmins.java | 139 --- .../user/performfish/ManageCompanyUsers.java | 160 --- .../performfish/ManageFarmAdministrators.java | 130 -- .../user/performfish/ManageFarmUsers.java | 134 -- .../user/performfish/ManageFarms.java | 277 ----- .../PromoteCompanyAdministrators.java | 81 -- .../PromoteFarmAdministrators.java | 92 -- .../SetCompanyAdministratorsSuperUser.java | 131 -- .../performfish/SetFarmAdministrators.java | 90 -- .../performfish/SubmittedFormValidation.java | 334 ----- .../user/performfish/bean/Association.java | 99 -- .../user/performfish/bean/Company.java | 77 -- .../user/performfish/bean/CompanyMember.java | 90 -- .../portlets/user/performfish/bean/Farm.java | 126 -- .../bean/PublishAnonymisedJob.java | 89 -- .../user/performfish/bean/SubmittedForm.java | 98 -- .../util/ImportedBatchChecker.java | 182 --- .../user/performfish/util/PFISHConstants.java | 85 -- .../portlets/user/performfish/util/Utils.java | 1077 ----------------- .../performfish/util/ValidationResult.java | 35 - .../comparators/AssociationComparator.java | 14 - .../util/comparators/CompanyComparator.java | 14 - .../comparators/CompanyMemberComparator.java | 14 - .../util/comparators/FarmComparator.java | 14 - .../comparators/FileVersionComparator.java | 14 - .../comparators/GenericFileComparator.java | 12 - .../util/comparators/TeamComparator.java | 14 - .../util/comparators/UserComparator.java | 14 - .../util/comparators/WSItemComparator.java | 20 - .../user/performfish/util/db/DBUtil.java | 361 ------ .../performfish/util/db/DB_Credentials.java | 70 -- .../util/db/DatabaseConnection.java | 101 -- src/main/webapp/WEB-INF/liferay-display.xml | 27 - .../WEB-INF/liferay-plugin-package.properties | 9 - src/main/webapp/WEB-INF/liferay-portlet.xml | 257 ---- src/main/webapp/WEB-INF/portlet.xml | 492 -------- src/main/webapp/WEB-INF/web.xml | 2 - src/main/webapp/css/loading_result.gif | Bin 11468 -> 0 bytes src/main/webapp/css/main.css | 185 --- src/main/webapp/css/table.css | 42 - src/main/webapp/css/up_img.png | Bin 3364 -> 0 bytes .../addnewcompany_or_assoc/AddNewCompany.jsp | 117 -- .../adduserstocompany/add_users_toCompany.jsp | 118 -- .../adduserstocompany/add_users_toFarm.jsp | 119 -- .../promote_company_administrators.jsp | 118 -- .../promote_farm_administrators.jsp | 119 -- .../companies_to_ass_view.jsp | 106 -- .../association_dashboard.jsp | 62 - .../company_private_repository.jsp | 125 -- .../show_all_versions.jsp | 92 -- .../editcompanyusers/edit_admin_users.jsp | 107 -- .../editcompanyusers/edit_company_users.jsp | 107 -- .../html/editfarmusers/edit_farm_users.jsp | 85 -- .../editfarmusers/edit_farmadmin_users.jsp | 91 -- .../empty_forms_config.jsp | 47 - .../empty_forms_fileupload_display.jsp | 146 --- .../html/error_pages/NotACompanyAdmin.jsp | 8 - .../webapp/html/error_pages/NotAFarmAdmin.jsp | 8 - .../NotBelongingToAnyAssociation.jsp | 8 - .../error_pages/NotBelongingToAnyCompany.jsp | 8 - .../error_pages/NotBelongingToAnyFarm.jsp | 8 - .../TooManyBelongingAssociation.jsp | 9 - .../error_pages/TooManyBelongingCompany.jsp | 8 - .../html/error_pages/TooManyBelongingFarm.jsp | 9 - .../error_pages/farmname_exists_already.jsp | 29 - .../html/error_pages/operation-error.jsp | 29 - .../farmrepository/SelectBelongingFarm.jsp | 44 - .../webapp/html/farmrepository/config.jsp | 27 - .../html/farmrepository/show_all_versions.jsp | 89 -- .../farmrepository/view_farm_repository.jsp | 232 ---- src/main/webapp/html/init.jsp | 76 -- .../manageassociations/edit_associations.jsp | 81 -- .../manage_associations_view.jsp | 107 -- .../html/managecompanies/edit_companies.jsp | 86 -- .../html/managecompanies/manage_companies.jsp | 84 -- .../managecompanyadmins/company_admins.jsp | 78 -- .../html/managecompanyusers/company_users.jsp | 78 -- .../managefarmadministratos/farm_admins.jsp | 95 -- .../html/managefarms/managefarms_view.jsp | 226 ---- .../manage_farm_users_view.jsp | 81 -- .../set_company_admin.jsp | 136 --- .../setfarmadministrators/set_farm_admin.jsp | 142 --- .../submittedformvalidation/validation.jsp | 39 - src/main/webapp/icon.png | Bin 467 -> 0 bytes src/main/webapp/js/jquery.min.js | 5 - src/main/webapp/js/jquery.uploadfile.min.js | 8 - src/main/webapp/js/main.js | 148 --- 119 files changed, 10973 deletions(-) delete mode 100644 .classpath delete mode 100644 .project delete mode 100644 .settings/.jsdtscope delete mode 100644 .settings/org.eclipse.core.resources.prefs delete mode 100644 .settings/org.eclipse.jdt.core.prefs delete mode 100644 .settings/org.eclipse.jst.jsp.core.prefs delete mode 100644 .settings/org.eclipse.m2e.core.prefs delete mode 100644 .settings/org.eclipse.wst.common.component delete mode 100644 .settings/org.eclipse.wst.common.project.facet.core.prefs.xml delete mode 100644 .settings/org.eclipse.wst.common.project.facet.core.xml delete mode 100644 .settings/org.eclipse.wst.jsdt.ui.superType.container delete mode 100644 .settings/org.eclipse.wst.jsdt.ui.superType.name delete mode 100644 .settings/org.eclipse.wst.validation.prefs delete mode 100644 .tern-project delete mode 100644 distro/LICENSE delete mode 100644 distro/README delete mode 100644 distro/changelog.xml delete mode 100644 distro/descriptor.xml delete mode 100644 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mode 100644 index ea84070..0000000 --- a/.project +++ /dev/null @@ -1,38 +0,0 @@ - - - PerformFISH-Apps - - - - - - org.eclipse.jdt.core.javabuilder - - - - - org.eclipse.wst.common.project.facet.core.builder - - - - - org.eclipse.wst.validation.validationbuilder - - - - - org.eclipse.m2e.core.maven2Builder - - - - - - org.eclipse.jem.workbench.JavaEMFNature - org.eclipse.wst.common.modulecore.ModuleCoreNature - org.eclipse.jdt.core.javanature - org.eclipse.m2e.core.maven2Nature - org.eclipse.wst.common.project.facet.core.nature - com.liferay.ide.core.liferayNature - org.eclipse.wst.jsdt.core.jsNature - - diff --git a/.settings/.jsdtscope b/.settings/.jsdtscope deleted file mode 100644 index f179e11..0000000 --- a/.settings/.jsdtscope +++ /dev/null @@ -1,13 +0,0 @@ - - - - - - - - - - - - - diff --git a/.settings/org.eclipse.core.resources.prefs b/.settings/org.eclipse.core.resources.prefs deleted file mode 100644 index 839d647..0000000 --- a/.settings/org.eclipse.core.resources.prefs +++ /dev/null @@ -1,5 +0,0 @@ -eclipse.preferences.version=1 -encoding//src/main/java=UTF-8 -encoding//src/main/resources=UTF-8 -encoding//src/test/java=UTF-8 -encoding/=UTF-8 diff --git a/.settings/org.eclipse.jdt.core.prefs b/.settings/org.eclipse.jdt.core.prefs deleted file mode 100644 index 91ca62e..0000000 --- a/.settings/org.eclipse.jdt.core.prefs +++ /dev/null @@ -1,14 +0,0 @@ -eclipse.preferences.version=1 -org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled -org.eclipse.jdt.core.compiler.codegen.methodParameters=do not generate -org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8 -org.eclipse.jdt.core.compiler.codegen.unusedLocal=preserve -org.eclipse.jdt.core.compiler.compliance=1.8 -org.eclipse.jdt.core.compiler.debug.lineNumber=generate -org.eclipse.jdt.core.compiler.debug.localVariable=generate -org.eclipse.jdt.core.compiler.debug.sourceFile=generate -org.eclipse.jdt.core.compiler.problem.assertIdentifier=error -org.eclipse.jdt.core.compiler.problem.enumIdentifier=error -org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning -org.eclipse.jdt.core.compiler.release=disabled -org.eclipse.jdt.core.compiler.source=1.8 diff --git a/.settings/org.eclipse.jst.jsp.core.prefs b/.settings/org.eclipse.jst.jsp.core.prefs deleted file mode 100644 index 3a5c98d..0000000 --- a/.settings/org.eclipse.jst.jsp.core.prefs +++ /dev/null @@ -1,3 +0,0 @@ -eclipse.preferences.version=1 -validateFragments=false -validation.use-project-settings=true diff --git a/.settings/org.eclipse.m2e.core.prefs b/.settings/org.eclipse.m2e.core.prefs deleted file mode 100644 index e6f7678..0000000 --- a/.settings/org.eclipse.m2e.core.prefs +++ /dev/null @@ -1,4 +0,0 @@ -activeProfiles=Liferay-v6.2-CE-(Tomcat-7)-(2) -eclipse.preferences.version=1 -resolveWorkspaceProjects=true -version=1 diff --git a/.settings/org.eclipse.wst.common.component b/.settings/org.eclipse.wst.common.component deleted file mode 100644 index 4d9f513..0000000 --- a/.settings/org.eclipse.wst.common.component +++ /dev/null @@ -1,10 +0,0 @@ - - - - - - - - - - diff --git a/.settings/org.eclipse.wst.common.project.facet.core.prefs.xml b/.settings/org.eclipse.wst.common.project.facet.core.prefs.xml deleted file mode 100644 index cc81385..0000000 --- a/.settings/org.eclipse.wst.common.project.facet.core.prefs.xml +++ /dev/null @@ -1,7 +0,0 @@ - - - - - - - diff --git a/.settings/org.eclipse.wst.common.project.facet.core.xml b/.settings/org.eclipse.wst.common.project.facet.core.xml deleted file mode 100644 index 7a1ffac..0000000 --- a/.settings/org.eclipse.wst.common.project.facet.core.xml +++ /dev/null @@ -1,9 +0,0 @@ - - - - - - - - - diff --git a/.settings/org.eclipse.wst.jsdt.ui.superType.container b/.settings/org.eclipse.wst.jsdt.ui.superType.container deleted file mode 100644 index 3bd5d0a..0000000 --- a/.settings/org.eclipse.wst.jsdt.ui.superType.container +++ /dev/null @@ -1 +0,0 @@ -org.eclipse.wst.jsdt.launching.baseBrowserLibrary \ No newline at end of file diff --git a/.settings/org.eclipse.wst.jsdt.ui.superType.name b/.settings/org.eclipse.wst.jsdt.ui.superType.name deleted file mode 100644 index 05bd71b..0000000 --- a/.settings/org.eclipse.wst.jsdt.ui.superType.name +++ /dev/null @@ -1 +0,0 @@ -Window \ No newline at end of file diff --git a/.settings/org.eclipse.wst.validation.prefs b/.settings/org.eclipse.wst.validation.prefs deleted file mode 100644 index 04cad8c..0000000 --- a/.settings/org.eclipse.wst.validation.prefs +++ /dev/null @@ -1,2 +0,0 @@ -disabled=06target -eclipse.preferences.version=1 diff --git a/.tern-project b/.tern-project deleted file mode 100644 index d7fbf24..0000000 --- a/.tern-project +++ /dev/null @@ -1,23 +0,0 @@ -{ - "plugins": { - "guess-types": { - - }, - "outline": { - - }, - "liferay": { - - }, - "yui3": { - - }, - "aui2.0.x": { - - } - }, - "libs": [ - "ecma5", - "browser" - ] -} \ No newline at end of file diff --git a/distro/LICENSE b/distro/LICENSE deleted file mode 100644 index 2d9616a..0000000 --- a/distro/LICENSE +++ /dev/null @@ -1 +0,0 @@ -${gcube.license} \ No newline at end of file diff --git a/distro/README b/distro/README deleted file mode 100644 index b13a32d..0000000 --- a/distro/README +++ /dev/null @@ -1,62 +0,0 @@ -The gCube System - ${name} --------------------------------------------------- - -${description} - - -${gcube.description} - -${gcube.funding} - - -Version --------------------------------------------------- - -${version} (${buildDate}) - -Please see the file named "changelog.xml" in this directory for the release notes. - - -Authors --------------------------------------------------- - -* Massimiliano Assante (massimiliano.assante@isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). - -Maintainers ------------ - -* Massimiliano Assante (massimiliano.assante@isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). - -Download information --------------------------------------------------- - -Source code is available from SVN: - ${scm.url} - -Binaries can be downloaded from the gCube website: - ${gcube.website} - - -Installation --------------------------------------------------- - -Installation documentation is available on-line in the gCube Wiki: - ${gcube.wikiRoot} - -Documentation --------------------------------------------------- - -Documentation is available on-line in the gCube Wiki: - ${gcube.wikiRoot} - -Support --------------------------------------------------- - -Bugs and support requests can be reported in the gCube issue tracking tool: - ${gcube.issueTracking} - - -Licensing --------------------------------------------------- - -This software is licensed under the terms you may find in the file named "LICENSE" in this directory. \ No newline at end of file diff --git a/distro/changelog.xml b/distro/changelog.xml deleted file mode 100644 index 6847af4..0000000 --- a/distro/changelog.xml +++ /dev/null @@ -1,10 +0,0 @@ - - - UUID Field Valorisation upon new Association, Company and Farms creation - - - First Release - - diff --git a/distro/descriptor.xml b/distro/descriptor.xml deleted file mode 100644 index b3f5628..0000000 --- a/distro/descriptor.xml +++ /dev/null @@ -1,31 +0,0 @@ - - servicearchive - - tar.gz - - / - - - ${distroDirectory} - / - true - - README - LICENSE - changelog.xml - profile.xml - - 755 - true - - - - - target/${build.finalName}.${project.packaging} - /${artifactId} - - - \ No newline at end of file diff --git a/distro/profile.xml b/distro/profile.xml deleted file mode 100644 index f66180c..0000000 --- a/distro/profile.xml +++ /dev/null @@ -1,25 +0,0 @@ - - - - Service - - ${Description} - PortletUser - ${artifactId} - ${version} - - - ${artifactId} - ${version} - - ${groupId} - ${artifactId} - ${version} - - - target/${build.finalName}.war - - - - - diff --git a/pom.xml b/pom.xml deleted file mode 100644 index 98e0b24..0000000 --- a/pom.xml +++ /dev/null @@ -1,239 +0,0 @@ - - - - 4.0.0 - - maven-parent - org.gcube.tools - 1.0.0 - - - org.gcube.portlets.user.performfish - PerformFISH-Apps-portlet - war - PerformFISH-Apps Portlet - 1.3.0-SNAPSHOT - - PerformFISH Apps is a set of portlet for the implementation of the Form Submission useful to calculate KPIs - - - scm:svn:http://svn.d4science.research-infrastructures.eu/gcube/trunk/portlets/user/${project.artifactId} - scm:https://svn.d4science.research-infrastructures.eu/gcube/trunk/portlets/user/${project.artifactId} - http://svn.d4science.research-infrastructures.eu/gcube/trunk/portlets/user/${project.artifactId} - - - - Liferay-v6.2-CE-(Tomcat-7)-(2) - - distro - 1.8 - 1.8 - 6.2.5 - 6.2.10.12 - /Users/massi/portal/liferay-portal-6.2-ce-ga6/deploy - /Users/massi/portal/liferay-portal-6.2-ce-ga6/tomcat-7.0.62/webapps - /Users/massi/portal/liferay-portal-6.2-ce-ga6/tomcat-7.0.62/lib/ext - /Users/massi/portal/liferay-portal-6.2-ce-ga6/tomcat-7.0.62/webapps/ROOT - - - - - - - org.gcube.distribution - maven-portal-bom - LATEST - pom - import - - - - - - org.gcube.resources.discovery - ic-client - - - org.gcube.resources - registry-publisher - - - org.apache.httpcomponents - httpclient - 4.5.3 - - - org.gcube.portal - storagehub-icons-library - - - org.gcube.dvos - usermanagement-core - provided - - - org.gcube.portal - storagehub-icons-library - - - org.gcube.common.portal - portal-manager - provided - - - commons-beanutils - commons-beanutils - provided - - - org.gcube.common - storagehub-client-library - - - org.gcube.core - common-scope-maps - compile - - - org.gcube.common - home-library - provided - - - org.gcube.common - home-library-jcr - provided - - - org.gcube.common - home-library-model - provided - - - org.gcube.common - authorization-client - provided - - - org.gcube.common - common-authorization - provided - - - org.postgresql - postgresql - 9.3-1102-jdbc41 - - - com.liferay.portal - portal-service - ${liferay.version} - provided - - - com.liferay.portal - util-bridges - ${liferay.version} - provided - - - com.liferay.portal - util-taglib - ${liferay.version} - provided - - - com.liferay.portal - util-java - ${liferay.version} - provided - - - javax.portlet - portlet-api - 2.0 - provided - - - javax.servlet - servlet-api - 2.4 - provided - - - javax.servlet.jsp - jsp-api - 2.0 - provided - - - javax.servlet - jstl - 1.2 - - - - - - com.liferay.maven.plugins - liferay-maven-plugin - ${liferay.maven.plugin.version} - - - generate-sources - - build-css - - - - - ${liferay.auto.deploy.dir} - ${liferay.app.server.deploy.dir} - ${liferay.app.server.lib.global.dir} - ${liferay.app.server.portal.dir} - ${liferay.version} - portlet - - - - maven-compiler-plugin - 2.5 - - UTF-8 - 1.8 - 1.8 - - - - maven-resources-plugin - 2.5 - - UTF-8 - - - - - org.apache.maven.plugins - maven-assembly-plugin - 2.2 - - - ${distroDirectory}/descriptor.xml - - - - - servicearchive - install - - single - - - - - - - - - \ No newline at end of file diff --git a/src/main/java/org/gcube/portlets/user/performfish/AddNewCompanyOrAssociation.java b/src/main/java/org/gcube/portlets/user/performfish/AddNewCompanyOrAssociation.java deleted file mode 100644 index 9a1fc11..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/AddNewCompanyOrAssociation.java +++ /dev/null @@ -1,152 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.portlets.user.performfish.bean.Association; -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.service.GroupLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class AddNewCompanyOrAssociation - */ -public class AddNewCompanyOrAssociation extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(AssociateUsersToCompany.class); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of AddNewCompanyOrAssociation"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - String vreName = GroupLocalServiceUtil.getGroup(groupId).getName(); - request.setAttribute("vreName", vreName); - List allTeams = getAllTeams(request); - List availableTeams = new ArrayList<>(); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List companies = DBUtil.getCompanies(conn); - List farms = DBUtil.getAllFarms(conn); - List associations = DBUtil.getAllAssociations(conn); - for (GCubeTeam gCubeTeam : allTeams) { - boolean found = false; - for (Company c : companies) { - if (gCubeTeam.getTeamId() == c.getCompanyId()) { - found = true; - break; - } - } - for (Farm f : farms) { - if (gCubeTeam.getTeamId() == f.getFarmId()) { - found = true; - break; - } - } - for (Association a : associations) { - if (gCubeTeam.getTeamId() == a.getAssociationId()) { - found = true; - break; - } - } - if (!found) - availableTeams.add(gCubeTeam); - } - request.setAttribute("availableTeams", availableTeams); - super.render(request, response); - - } catch (Exception e) { - e.printStackTrace(); - } - } - - private List getAllTeams(RenderRequest request) throws Exception { - long groupId = PortalUtil.getScopeGroupId(request); - RoleManager rm = new LiferayRoleManager(); - return rm.listTeamsByGroup(groupId); - } - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void makeCompanies(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - _log.info("makeCompanies action request ..."); - long groupId = ParamUtil.getLong(actionRequest, "groupId"); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - try { - String[] companyIdsToAdd = ParamUtil.getParameterValues(actionRequest, "selectedTeamIds"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername", "unknown"); - if (companyIdsToAdd.length > 0) { - _log.info("associateCompanies writing to DB now ..."); - boolean result = DBUtil.addCompany(conn, companyIdsToAdd, currentUsername); - if (!result) { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - - } - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void makeAssociations(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - _log.info("makeAssociations action request ..."); - long groupId = ParamUtil.getLong(actionRequest, "groupId"); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - try { - String[] associationsIdsToAdd = ParamUtil.getParameterValues(actionRequest, "selectedTeamIds"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername", "unknown"); - if (associationsIdsToAdd.length > 0) { - _log.info("associateCompanies writing to DB now ..."); - boolean result = DBUtil.addAssociation(conn, associationsIdsToAdd, currentUsername); - if (!result) { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - - } -} \ No newline at end of file diff --git a/src/main/java/org/gcube/portlets/user/performfish/AssociateCompaniesToAssociation.java b/src/main/java/org/gcube/portlets/user/performfish/AssociateCompaniesToAssociation.java deleted file mode 100644 index f66e8fa..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/AssociateCompaniesToAssociation.java +++ /dev/null @@ -1,102 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.GroupLocalServiceUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class AssociateCompaniesToAssociation - */ -public class AssociateCompaniesToAssociation extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(AssociateCompaniesToAssociation.class); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of AssociateCompaniesToAssociation"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - long[] associationIds = ParamUtil.getLongValues(httpReq, "associationId"); - if (associationIds.length > 0) { //super user mode - String vreName = GroupLocalServiceUtil.getGroup(groupId).getName(); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List companies = DBUtil.listCompaniesNotAssociatedToAssociations(conn); - for (Company company : companies) { - company.setName(TeamLocalServiceUtil.getTeam(company.getCompanyId()).getName()); - company.setImageUrl(Utils.getCompanyLogoURL(company.getName(), groupId, request)); - } - - Team theAssociation = TeamLocalServiceUtil.getTeam(associationIds[0]); - request.setAttribute("companies", companies); - request.setAttribute("selectedAssociation", theAssociation); - request.setAttribute("vreName", vreName); - request.setAttribute("operationFinished", false); - } else { - request.setAttribute("operationFinished", true); - super.render(request, response); - } - - super.render(request, response); - - } catch (Exception e) { - e.printStackTrace(); - } - } - - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void associateCompanies(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername", "unknown"); - _log.info("associateCompanies action request from " + currentUsername); - long groupId = ParamUtil.getLong(actionRequest, "groupId"); - long selectedAssociationId = ParamUtil.getLong(actionRequest, "selectedAssociationId"); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - try { - long[] companyIdsToAssociate = ParamUtil.getLongValues(actionRequest, "associateCompanyIds"); - if (companyIdsToAssociate.length > 0) { - _log.info("associateCompanyIds writing to DB now ... \nselectedAssociationId="+selectedAssociationId+"\n companyIdsToAssociate="+companyIdsToAssociate.toString()); - boolean result = DBUtil.associateCompaniesToAssociation(conn, selectedAssociationId, companyIdsToAssociate); - if (!result) { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/AssociateUsersToCompany.java b/src/main/java/org/gcube/portlets/user/performfish/AssociateUsersToCompany.java deleted file mode 100644 index 9fe8222..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/AssociateUsersToCompany.java +++ /dev/null @@ -1,126 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.Arrays; -import java.util.Collections; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceSharedFolder; -import org.gcube.common.homelibrary.home.workspace.accessmanager.ACLType; -import org.gcube.portlets.user.performfish.bean.CompanyMember; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.CompanyMemberComparator; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - -import com.liferay.portal.kernel.cache.CacheRegistryUtil; -import com.liferay.portal.kernel.cache.MultiVMPoolUtil; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.kernel.webcache.WebCachePoolUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class AssociateUsersToCompany - */ -public class AssociateUsersToCompany extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(AssociateUsersToCompany.class); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of AssociateUsersToCompany"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theTeam = Utils.checkBelongingToOneCompanyOnly(request, response, this); - request.setAttribute("theTeam", TeamLocalServiceUtil.getTeam(theTeam.getTeamId())); - if (theTeam == null || !Utils.isCompanyAdmin(Utils.getCurrentUser(request), groupId, theTeam)) { //check is Admin - _log.error("Some error occurred"); - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } else { - List companyMembers = Utils.getRegularCompanyMembers(theTeam.getTeamId(), theTeam.getGroupId()); - Collections.sort(companyMembers, new CompanyMemberComparator()); - request.setAttribute("companyMembers", companyMembers); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theTeam.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - super.render(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void associateCompanyUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - String[] usernamesToAssociateToCompany = ParamUtil.getParameterValues(actionRequest, "addUserIds"); - long teamId = ParamUtil.getLong(actionRequest, "teamId"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - String context = Utils.getCurrentContext(currentGroupId); - _log.info(currentUsername + " has requested the association of some user(s) to the company having id="+teamId + " in context="+context); - LiferayRoleManager rm = new LiferayRoleManager(); - LiferayUserManager um = new LiferayUserManager(); - GCubeTeam team = rm.getTeam(teamId); - WorkspaceFolder wsFolder = Utils.getWSCompanyFolder(currentUsername, context, team); - if (wsFolder.isShared()) { - WorkspaceSharedFolder sharedFolder = (WorkspaceSharedFolder) wsFolder; - List usersToShareWith = Arrays.asList(usernamesToAssociateToCompany); - _log.info("Sharing with users =>"+usersToShareWith.toString()); - sharedFolder.share(usersToShareWith); - sharedFolder.setACL(usersToShareWith, ACLType.WRITE_ALL); - for (int i = 0; i < usernamesToAssociateToCompany.length; i++) { - _log.info("sharing OK associateing user to team =>"+usernamesToAssociateToCompany[i]); - long userId = um.getUserByUsername(usernamesToAssociateToCompany[i]).getUserId(); - List currentTeams = TeamLocalServiceUtil.getUserTeams(userId, currentGroupId); - long[] teamIds = null; - if (currentTeams != null && !currentTeams.isEmpty()) { - teamIds = new long[currentTeams.size()+1]; - int j = 0; - for (Team t : currentTeams) { - teamIds[j] = t.getTeamId(); - j++; - } - teamIds[j] = teamId; - TeamLocalServiceUtil.setUserTeams(userId, teamIds); - } else { - teamIds = new long[1]; - teamIds[0] = teamId; - TeamLocalServiceUtil.setUserTeams(userId, teamIds); - } - CacheRegistryUtil.clear(); - MultiVMPoolUtil.clear(); - WebCachePoolUtil.clear(); - _log.info("added user to team Done"); - } - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/AssociateUsersToFarm.java b/src/main/java/org/gcube/portlets/user/performfish/AssociateUsersToFarm.java deleted file mode 100644 index 10af833..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/AssociateUsersToFarm.java +++ /dev/null @@ -1,110 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.Collections; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.UserComparator; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.cache.CacheRegistryUtil; -import com.liferay.portal.kernel.cache.MultiVMPoolUtil; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.kernel.webcache.WebCachePoolUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class AssociateUsersToFarm - */ -public class AssociateUsersToFarm extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(AssociateUsersToFarm.class); - private static RoleManager RM = new LiferayRoleManager(); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of AssociateUsersToFarm"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - - GCubeTeam theFarm = null; - if (farmIds != null && farmIds.length > 0) { - long selectedFarmId = Utils.unmaskId(farmIds[0]); - theFarm = RM.getTeam(selectedFarmId); - request.getPortletSession().setAttribute("theFarm", theFarm); - } else { - theFarm = (GCubeTeam) request.getPortletSession().getAttribute("theFarm"); - } - request.setAttribute("theTeam", TeamLocalServiceUtil.getTeam(theFarm.getTeamId())); - if (theFarm == null || !Utils.isFarmAdmin(Utils.getCurrentUser(request), groupId, theFarm)) { //check is Admin - _log.error("Some error occurred"); - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_FARM_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } else { - List nonFarmMembers = Utils.getAvailableFarmMembersToAssociate(theFarm.getTeamId(), theCompany.getTeamId(), theCompany.getGroupId()); - Collections.sort(nonFarmMembers, new UserComparator()); - request.setAttribute("nonFarmMembers", nonFarmMembers); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - super.render(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - //TODO: yiou have to manage the workspace folder still ... - public void associateFarmUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - String[] usernamesToAssociateToFarm = ParamUtil.getParameterValues(actionRequest, "addUserIds"); - long teamId = ParamUtil.getLong(actionRequest, "teamId"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - String context = Utils.getCurrentContext(currentGroupId); - _log.info(currentUsername + " has requested the association of some user(s) to the farm having id="+teamId + " in context="+context); - LiferayRoleManager rm = new LiferayRoleManager(); - LiferayUserManager um = new LiferayUserManager(); - - for (int i = 0; i < usernamesToAssociateToFarm.length; i++) { - _log.info("sharing OK associating user to team =>"+usernamesToAssociateToFarm[i]); - long userId = um.getUserByUsername(usernamesToAssociateToFarm[i]).getUserId(); - rm.assignTeamToUser(userId, teamId); - _log.info("added user to farm Done"); - CacheRegistryUtil.clear(); - MultiVMPoolUtil.clear(); - WebCachePoolUtil.clear(); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/AssociationDashboard.java b/src/main/java/org/gcube/portlets/user/performfish/AssociationDashboard.java deleted file mode 100644 index d1b7666..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/AssociationDashboard.java +++ /dev/null @@ -1,71 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.LinkedHashMap; -import java.util.List; - -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class AssociationDashboard - */ -public class AssociationDashboard extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(AssociationDashboard.class); - - @Override - public void render(RenderRequest request, RenderResponse response) throws PortletException, IOException { - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theAsso = Utils.checkBelongingToOneAssociationOnly(request, response, this); - request.setAttribute("theAssociation", theAsso); - - if (theAsso != null) { - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - _log.debug("Association name =" + theAsso.getTeamName()); - String imageUrl = Utils.getCompanyLogoURL(theAsso.getTeamName(), groupId, request); - request.setAttribute("associationLogoURL", imageUrl); //pass to logo URL to the JSP - - _log.debug("Featching companies and farms =" + theAsso.getTeamName()); - LinkedHashMap> associationCompanies = new LinkedHashMap<>(); - List companIds = DBUtil.getCompaniesIdsByAssociation(conn, theAsso.getTeamId()); - for (Long companId : companIds) { - Team theCompany = TeamLocalServiceUtil.getTeam(companId); - Company toPut = new Company(companId, theAsso.getTeamId(), false); - toPut.setName(theCompany.getName()); - toPut.setImageUrl(Utils.getCompanyLogoURL(theCompany.getName(), groupId, request)); - List companyFarms = DBUtil.listFarmsByCompanyId(conn, companId); - for (Farm farm : companyFarms) { - String farmName = TeamLocalServiceUtil.getTeam(farm.getFarmId()).getName(); - farm.setName(farmName); - } - associationCompanies.put(toPut, companyFarms); - request.setAttribute("associationCompanies", associationCompanies); - } - //display the view.jsp - super.render(request, response); - } - - } catch (Exception e) { - e.printStackTrace(); - } - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/CompanyFarmRepository.java b/src/main/java/org/gcube/portlets/user/performfish/CompanyFarmRepository.java deleted file mode 100644 index 3fb1d2b..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/CompanyFarmRepository.java +++ /dev/null @@ -1,477 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.io.InputStream; -import java.io.UnsupportedEncodingException; -import java.net.URL; -import java.net.URLEncoder; -import java.security.KeyManagementException; -import java.security.NoSuchAlgorithmException; -import java.security.cert.CertificateException; -import java.util.ArrayList; -import java.util.Collections; -import java.util.HashMap; -import java.util.List; -import java.util.Map; - -import javax.net.ssl.HostnameVerifier; -import javax.net.ssl.HttpsURLConnection; -import javax.net.ssl.SSLContext; -import javax.net.ssl.SSLSession; -import javax.net.ssl.TrustManager; -import javax.net.ssl.X509TrustManager; -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletPreferences; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.ResourceRequest; -import javax.portlet.ResourceResponse; -import javax.portlet.WindowState; -import javax.servlet.http.HttpServletRequest; -import javax.servlet.http.HttpServletResponse; - -import org.apache.commons.io.IOUtils; -import org.gcube.common.authorization.library.provider.SecurityTokenProvider; -import org.gcube.common.homelibary.model.versioning.WorkspaceVersion; -import org.gcube.common.homelibrary.home.exceptions.InternalErrorException; -import org.gcube.common.homelibrary.home.workspace.Workspace; -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceItem; -import org.gcube.common.homelibrary.home.workspace.exceptions.ItemNotFoundException; -import org.gcube.common.homelibrary.home.workspace.folder.items.ExternalFile; -import org.gcube.common.storagehub.client.StreamDescriptor; -import org.gcube.common.storagehub.client.dsl.StorageHubClient; -import org.gcube.common.storagehub.client.plugins.AbstractPlugin; -import org.gcube.common.storagehub.client.proxies.ItemManagerClient; -import org.gcube.common.storagehub.model.items.Item; -import org.gcube.common.storagehub.model.service.Version; -import org.gcube.portlets.user.performfish.bean.PublishAnonymisedJob; -import org.gcube.portlets.user.performfish.bean.SubmittedForm; -import org.gcube.portlets.user.performfish.util.ImportedBatchChecker; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.WSItemComparator; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.json.JSONArray; -import com.liferay.portal.kernel.json.JSONFactoryUtil; -import com.liferay.portal.kernel.json.JSONObject; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.ServletResponseUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.GetterUtil; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.kernel.util.StringPool; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * - * @author M. Assante CNR-ISTI - */ -public class CompanyFarmRepository extends MVCPortlet { - public static final String PHASE_PREFERENCE_ATTR_NAME = "phase"; - - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(CompanyFarmRepository.class); - - private static RoleManager RM = new LiferayRoleManager(); - - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of CompanyFarmRepository"); - - try { - GCubeTeam theFarm = null; - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - String selectedItemId = (String) request.getAttribute("itemId"); - if (selectedItemId == null) {//this handles when show version is clicked - if (farmIds == null || farmIds.length == 0) { - List theFarms = Utils.getUserFarms(request, response, this); //if pass here only one farm is returned otherswise ir renders Utils.SELECT_FARM_PAGE_PATH - if (theFarms != null && ! theFarms.isEmpty()) { - theFarm = theFarms.get(0); - request.setAttribute("theFarm", theFarms.get(0)); //pass to the JSP - } - } - else { //the farmId is passed via param on the query string - long selectedFarmId = Utils.unmaskId(farmIds[0]); - theFarm = RM.getTeam(selectedFarmId); - if ( Utils.checkBelongsToTeam(PortalUtil.getUserId(request), theFarm.getTeamId(), PortalUtil.getScopeGroupId(request)) ) //check that the user belong ot the farm - request.setAttribute("theFarm", theFarm); //pass to the JSP - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } - _log.info(" initialise of CompanyFarmRepository Page done"); - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - request.setAttribute("theCompany", theCompany); - - String context = Utils.getCurrentContext(request); - String username = Utils.getCurrentUser(request).getUsername(); - if (theFarm != null ) { - //check folder exists - WorkspaceFolder sharedFolder = Utils.getWSFarmFolder( - username, - context, - theCompany, theFarm); - - List companyFiles = sharedFolder.getChildren(true); - Collections.sort(companyFiles, new WSItemComparator()); - List filteredFiles = new ArrayList<>(); - PortletPreferences portletPreferences = request.getPreferences(); - String selectedPhase = GetterUtil.getString(portletPreferences.getValue(PHASE_PREFERENCE_ATTR_NAME, StringPool.BLANK)); - _log.debug("selectedPhase: "+selectedPhase); - String adjustedPhaseName = selectedPhase; - if (selectedPhase.compareTo("Pre") == 0) - adjustedPhaseName = "Pre-grow"; - if (selectedPhase.compareTo(PFISHConstants.SHOW_ALL_PHASES) != 0) { - for (WorkspaceItem workspaceItem : companyFiles) { - if (workspaceItem.getName().contains(adjustedPhaseName) || - ((selectedPhase.compareTo("Grow") == 0) && workspaceItem.getName().contains("Farm Data")) ) { - if (workspaceItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) workspaceItem; - filteredFiles.add(file); - } - } - } - } - else { - for (WorkspaceItem workspaceItem : companyFiles) { - if (workspaceItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) workspaceItem; - filteredFiles.add(file); - } - } - } - - //TODO - List submittedFormsWithPublishStatus= getSubmittedFormPublishAndAnonimStatus(request, context, theFarm.getTeamId(), filteredFiles); - request.setAttribute("submittedFormsWithPublishStatus", submittedFormsWithPublishStatus); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - } - } - super.render(request, response); - } catch (Exception e) { - e.printStackTrace(); - } - } - - private List getSubmittedFormPublishAndAnonimStatus(RenderRequest renderRequest, String context, long farmId, List filteredFiles) throws Exception { - List toReturn = new ArrayList<>(); - - String authorizationToken = Utils.getCurrentUserToken(context, Utils.getCurrentUser(renderRequest).getUsername()); - String analyticalToolkitServiceURL = Utils.getAnalyticalToolkitEndpoint(context) ; - SecurityTokenProvider.instance.set(authorizationToken); - StringBuilder sb = new StringBuilder(analyticalToolkitServiceURL) - .append("/import/") - .append(farmId).append("?gcube-token="+authorizationToken); - String request = sb.toString(); - fixUntrustCertificate() ; - URL url= new URL(request); - HttpsURLConnection conn= (HttpsURLConnection) url.openConnection(); - conn.setDoOutput( true ); - conn.setInstanceFollowRedirects( false ); - conn.setRequestMethod( "GET" ); - conn.setRequestProperty( "Content-Type", "application/json"); - conn.setRequestProperty( "charset", "utf-8"); - conn.setUseCaches( false ); - - InputStream in = conn.getInputStream(); - String encoding = conn.getContentEncoding(); - encoding = encoding == null ? "UTF-8" : encoding; - String body = IOUtils.toString(in, encoding); - - JSONArray jsArray = JSONFactoryUtil.createJSONArray(body); - Map jobs = new HashMap<>(); - System.out.println("*** Processing list, no of items = "+jsArray.length()); - for (int i = 0; i < jsArray.length(); i++) { - JSONObject cData = jsArray.getJSONObject(i); - PublishAnonymisedJob toPut = new PublishAnonymisedJob(cData); - String sourceUrl = toPut.getSourceUrl(); //theKey - if (jobs.containsKey(sourceUrl)) { - PublishAnonymisedJob toCompare = jobs.get(sourceUrl); - if (toPut.getEndTimeEpochSecond() > toCompare.getEndTimeEpochSecond()) { //if the current (toPut) is more recent than the one in the map (toCompare) we replace it - jobs.put(sourceUrl, toPut); - } - } - else - jobs.put(sourceUrl, new PublishAnonymisedJob(cData)); - } - /*here we have the list of the most recent jobs per type (GROW_OUT_INDIVIDUAL, PRE_ONGROWING etc) - * with their STATUS (COMPLETE, FAILED, IN PROGRESS) - * - */ - _log.debug("*** List Processed, no of items = "+jobs.keySet().size()); - for (String key : jobs.keySet()) { - System.out.println(jobs.get(key)); - } - // - StorageHubClient shub = new StorageHubClient(); - for (ExternalFile externalFile : filteredFiles) { - String publicURL = shub.open(externalFile.getId()).asFile().getPublicLink().toString(); - PublishAnonymisedJob job = jobs.get(publicURL); - if (job != null) { - long endTimeInMillis = job.getEndTimeEpochSecond()*1000; - toReturn.add(new SubmittedForm(externalFile, job.getStatus(), job.getSubmitterIdentity(), endTimeInMillis)); - } else - toReturn.add(new SubmittedForm(externalFile)); - } - return toReturn; - } - - public void displayVersions(ActionRequest request, ActionResponse response) throws Exception { - System.out.println("**** displayVersionsdisplayVersionsdisplayVersionsdisplayVersions"); - String itemId = ParamUtil.getString(request, "fileItem"); - long farmId = ParamUtil.getLong(request, "farmId"); - - if (itemId == null || itemId.compareTo("")==0) { - SessionErrors.add(request.getPortletSession(),"form-error"); - return; - } - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(request); - GCubeUser currentUser = Utils.getCurrentUser(httpReq); - String context = Utils.getCurrentContext(httpReq); - Workspace ws = Utils.getWS(currentUser.getUsername(), context) ; - WorkspaceItem theItem = ws.getItem(itemId); - if (theItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) theItem; - List versions = file.getVersionHistory(); - request.setAttribute("versions", versions); //pass to the JSP - } else { - response.setRenderParameter("jspPage", PFISHConstants.OPERATION_ERROR_PATH); - } - request.setAttribute("farmId", farmId); - request.setAttribute("itemId", itemId); - request.setAttribute("itemName", theItem.getName()); - response.setWindowState(WindowState.MAXIMIZED); - response.setRenderParameter("jspPage", "/html/farmrepository/show_all_versions.jsp"); - } - - - public void serveResource(ResourceRequest resourceRequest, ResourceResponse resourceResponse) throws IOException, PortletException { - //if download file - String fileToDownloadId = ParamUtil.getString(resourceRequest, "fileToDownloadId", null); - //if download version - String versionDownloadItemId = ParamUtil.getString(resourceRequest, "versionDownloadItemId", null); - String versionDownloadName = ParamUtil.getString(resourceRequest, "versionDownloadName", null); - - String fileToPublishId = ParamUtil.getString(resourceRequest, "fileToPublishId", null); - String farmIdString = ParamUtil.getString(resourceRequest, "farmId", null); - - String authToken = setAuthorizationToken(resourceRequest); - //check if is a file download - if (fileToDownloadId != null) { - String selectedItemId = fileToDownloadId; - try { - ItemManagerClient client = AbstractPlugin.item().build(); - StreamDescriptor streamDescr = client.download(selectedItemId); - HttpServletResponse httpRes = PortalUtil.getHttpServletResponse(resourceResponse); - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(resourceRequest); - ServletResponseUtil.sendFile(httpReq,httpRes, streamDescr.getFileName(), streamDescr.getStream(), "application/download"); - streamDescr.getStream().close(); - } - catch (Exception e) { - e.printStackTrace(); - } - } - else if (versionDownloadItemId != null && versionDownloadName != null) { //check if download version - GCubeUser currentUser = Utils.getCurrentUser(resourceRequest); - String context = Utils.getCurrentContext(resourceRequest); - Workspace ws = Utils.getWS(currentUser.getUsername(), context) ; - WorkspaceItem theItem; - try { - theItem = ws.getItem(versionDownloadItemId); - if (theItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) theItem; - InputStream is = file.downloadVersion(versionDownloadName); - HttpServletResponse httpRes = PortalUtil.getHttpServletResponse(resourceResponse); - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(resourceRequest); - ServletResponseUtil.sendFile(httpReq,httpRes, versionDownloadName+"_"+file.getName(), is, "application/download"); - } - } catch (ItemNotFoundException | InternalErrorException e) { - e.printStackTrace(); - } - } - else if (fileToPublishId != null && farmIdString != null) { //check if is publish and anonimyse - long farmId = Long.parseLong(farmIdString); - try { - ItemManagerClient client = AbstractPlugin.item().build(); - Item selectedForm = client.get(fileToPublishId, "hl:accounting"); - - String publicLink = client.getPublickLink(fileToPublishId).toString(); - List versions = client.getFileVersions(fileToPublishId); - String theVersion = "1.0"; - for (Version version : versions) { - if (version.isCurrent()) - theVersion = version.getName(); - } - _log.debug("Publish and Anonymise " + selectedForm.getName()); - String batchType = Utils.getBatchTypeName(Utils.getPhaseByFileName(selectedForm.getName()), selectedForm.getName()); - - String result = submitPublishAndAnonymise(resourceRequest, farmId, publicLink, theVersion, batchType, authToken); - JSONObject fileObject = JSONFactoryUtil.createJSONObject(); - fileObject.put("success", result); - resourceResponse.getWriter().println(fileObject); - } - catch (Exception e) { - e.printStackTrace(); - } - } - else { - String batchType = ParamUtil.getString(resourceRequest, "batchType", null); - String farmIdStr = ParamUtil.getString(resourceRequest, "farmId", null); - String context = Utils.getCurrentContext(resourceRequest); - long farmId = Long.parseLong(farmIdStr); - boolean analyisisEnabled = false; - try { - analyisisEnabled = ImportedBatchChecker.checkAnalysisAvailability(farmId, batchType, context); - } - catch (Exception e) { - JSONObject fileObject = JSONFactoryUtil.createJSONObject(); - fileObject.put("success", "NOK"); - fileObject.put("message", " There was an error on the server, please report this issue"); - resourceResponse.getWriter().println(fileObject); - } - if (analyisisEnabled) { - JSONObject fileObject = JSONFactoryUtil.createJSONObject(); - fileObject.put("success", "OK"); - resourceResponse.getWriter().println(fileObject); - } else { - JSONObject fileObject = JSONFactoryUtil.createJSONObject(); - fileObject.put("success", "NOK"); - fileObject.put("message", " Low number of batches"); - resourceResponse.getWriter().println(fileObject); - } - - } - - } - - /** - * set the authorization token in Thread local and return the current {@link AuthorizedUser} instance - * @param request - * @return - */ - private String setAuthorizationToken(ResourceRequest request) { - GCubeUser currentUser = Utils.getCurrentUser(request); - String scope = Utils.getCurrentContext(request); - String authorizationToken = Utils.getCurrentUserToken(scope, currentUser.getUsername()); - SecurityTokenProvider.instance.set(authorizationToken); - return authorizationToken; - } - - private static String submitPublishAndAnonymise(ResourceRequest request, long farmId, String publicLink, String version, String batchType, String token) { - String encodedURL = publicLink; - try { - encodedURL = URLEncoder.encode(publicLink, "UTF-8"); - } catch (UnsupportedEncodingException e) { - e.printStackTrace(); - } - _log.debug("farmId " + farmId); - _log.debug("item URL encoded " + encodedURL); - _log.debug("version " + version); - _log.debug("batchType " + batchType); - Map params = new HashMap<>(); - params.put("batch_type", batchType); - params.put("farmid", ""+farmId); - params.put("source", encodedURL); - params.put("source_version", version); - params.put("gcube-token", token); - - String urlParameters = "batch_type="+batchType+"&farmid="+farmId+"&source="+encodedURL+"&source_version="+version+"&gcube-token="+token; - - String context = Utils.getCurrentContext(request); - String analyticalToolkitServiceURL = Utils.getAnalyticalToolkitEndpoint(context) ; - - return doPOSTRequest(analyticalToolkitServiceURL, params, urlParameters); - } - - private static String doPOSTRequest(String analyticalToolkitServiceURL, Map params, String urlParameters) { - - StringBuilder sb = new StringBuilder(analyticalToolkitServiceURL) - .append("/import?") - .append(urlParameters); - String request = sb.toString(); - _log.info("Performing POST to: " + request); - int status = -1; - try { - fixUntrustCertificate() ; - URL url= new URL(request); - HttpsURLConnection conn= (HttpsURLConnection) url.openConnection(); - conn.setDoOutput( true ); - conn.setInstanceFollowRedirects( false ); - conn.setRequestMethod( "POST" ); - conn.setRequestProperty( "Content-Type", "application/x-www-form-urlencoded"); - conn.setRequestProperty( "charset", "utf-8"); - conn.setUseCaches( false ); - System.out.println("Posted with code "+ conn.getResponseCode() +" Response: " + conn.getResponseMessage()); - System.out.println("Parameters:" + params.toString()); - //responseMessage = conn.getResponseMessage(); - status = conn.getResponseCode(); - - InputStream in = conn.getInputStream(); - String encoding = conn.getContentEncoding(); - encoding = encoding == null ? "UTF-8" : encoding; - String body = IOUtils.toString(in, encoding); - System.out.println("Response Body:"); - System.out.println(body); - - if (status >= 200 && status <= 300) { - return "OK"; - } - else - return "KO"; - } - catch (Exception e) { - e.printStackTrace(); - return "KO"; - } - } - - - - private static void fixUntrustCertificate() throws KeyManagementException, NoSuchAlgorithmException{ - TrustManager[] trustAllCerts = new TrustManager[]{ - new X509TrustManager() { - public java.security.cert.X509Certificate[] getAcceptedIssuers() { - return null; - } - @Override - public void checkClientTrusted(java.security.cert.X509Certificate[] certs, String authType) - throws CertificateException { - } - - @Override - public void checkServerTrusted(java.security.cert.X509Certificate[] certs, String authType) - throws CertificateException { - } - - } - }; - - SSLContext sc = SSLContext.getInstance("SSL"); - sc.init(null, trustAllCerts, new java.security.SecureRandom()); - HttpsURLConnection.setDefaultSSLSocketFactory(sc.getSocketFactory()); - - HostnameVerifier allHostsValid = new HostnameVerifier() { - public boolean verify(String hostname, SSLSession session) { - return true; - } - }; - - // set the allTrusting verifier - HttpsURLConnection.setDefaultHostnameVerifier(allHostsValid); - } - - -} \ No newline at end of file diff --git a/src/main/java/org/gcube/portlets/user/performfish/CompanyFarmRepositoryConfigurationAction.java b/src/main/java/org/gcube/portlets/user/performfish/CompanyFarmRepositoryConfigurationAction.java deleted file mode 100644 index 2787af2..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/CompanyFarmRepositoryConfigurationAction.java +++ /dev/null @@ -1,30 +0,0 @@ -package org.gcube.portlets.user.performfish; -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletConfig; -import javax.portlet.PortletPreferences; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import com.liferay.portal.kernel.log.Log; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.portlet.DefaultConfigurationAction; - -public class CompanyFarmRepositoryConfigurationAction extends DefaultConfigurationAction { - private static Log _log = LogFactoryUtil.getLog(CompanyFarmRepositoryConfigurationAction.class); - @Override - public void processAction(PortletConfig portletConfig, ActionRequest actionRequest, ActionResponse actionResponse) throws Exception { - super.processAction(portletConfig, actionRequest, actionResponse); - PortletPreferences prefs = actionRequest.getPreferences(); - String phaseValue = prefs.getValue("phase", ""); - _log.info("selected phase = " + phaseValue + " in ConfigurationAction.processAction() saved correctly"); - } - - @Override - public String render(PortletConfig portletConfig, - RenderRequest renderRequest, RenderResponse renderResponse) - throws Exception { - return "/html/farmrepository/config.jsp"; - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/CompanyPrivateRepository.java b/src/main/java/org/gcube/portlets/user/performfish/CompanyPrivateRepository.java deleted file mode 100644 index 01fd50d..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/CompanyPrivateRepository.java +++ /dev/null @@ -1,195 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.io.InputStream; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.Collections; -import java.util.LinkedHashMap; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.ResourceRequest; -import javax.portlet.ResourceResponse; -import javax.portlet.WindowState; -import javax.servlet.http.HttpServletRequest; -import javax.servlet.http.HttpServletResponse; - -import org.gcube.common.authorization.library.provider.SecurityTokenProvider; -import org.gcube.common.homelibary.model.versioning.WorkspaceVersion; -import org.gcube.common.homelibrary.home.exceptions.InternalErrorException; -import org.gcube.common.homelibrary.home.workspace.Workspace; -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceItem; -import org.gcube.common.homelibrary.home.workspace.exceptions.ItemNotFoundException; -import org.gcube.common.homelibrary.home.workspace.folder.items.ExternalFile; -import org.gcube.common.storagehub.client.StreamDescriptor; -import org.gcube.common.storagehub.client.plugins.AbstractPlugin; -import org.gcube.common.storagehub.client.proxies.ItemManagerClient; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.WSItemComparator; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.ServletResponseUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class CompanyPrivateRepository - */ -public class CompanyPrivateRepository extends MVCPortlet { - - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(CompanyFarmRepository.class); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of CompanyPrivateRepository"); - - try { - _log.info(" initialise of CompanyPrivateRepository done"); - - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - boolean isCompanyAdmin = Utils.isCompanyAdmin( Utils.getCurrentUser(request), groupId, theCompany); - if (theCompany != null && isCompanyAdmin) { //check is Admin - request.setAttribute("theCompany", theCompany); - String currentContext = Utils.getCurrentContext(request); - GCubeUser currentUser = Utils.getCurrentUser(request); - RoleManager rm = new LiferayRoleManager(); - //check folder exists - Utils.getWSCompanyFolder(currentUser.getUsername(), currentContext, theCompany); - //look for company farms - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List companyFarms = DBUtil.listFarmsByCompanyId(conn, theCompany.getTeamId()); - LinkedHashMap> theFiles = new LinkedHashMap<>(); - for (Farm farm : companyFarms) { - GCubeTeam theFarm = rm.getTeam(farm.getFarmId()); - farm.setName(theFarm.getTeamName()); - WorkspaceFolder farmFolder = Utils.getWSFarmFolder( - currentUser.getUsername(), - currentContext, - theCompany, theFarm); - List farmItems = farmFolder.getChildren(true); - Collections.sort(farmItems, new WSItemComparator()); - List farmFiles = new ArrayList<>(); - for (WorkspaceItem workspaceItem : farmItems) { - if (workspaceItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) workspaceItem; - farmFiles.add(file); - } - } - theFiles.put(farm, farmFiles); - } - request.setAttribute("companyPrivateFiles", theFiles); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - - } catch (Exception e) { - e.printStackTrace(); - } - } - - public void displayVersions(ActionRequest request, ActionResponse response) throws Exception { - String itemId = ParamUtil.getString(request, "fileItem"); - if (itemId == null || itemId.compareTo("")==0) { - SessionErrors.add(request.getPortletSession(),"form-error"); - return; - } - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(request); - GCubeUser currentUser = Utils.getCurrentUser(httpReq); - String context = Utils.getCurrentContext(httpReq); - Workspace ws = Utils.getWS(currentUser.getUsername(), context) ; - WorkspaceItem theItem = ws.getItem(itemId); - if (theItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) theItem; - List versions = file.getVersionHistory(); - request.setAttribute("versions", versions); //pass to the JSP - } else { - response.setRenderParameter("jspPage", PFISHConstants.OPERATION_ERROR_PATH); - } - request.setAttribute("itemId", itemId); - request.setAttribute("itemName", theItem.getName()); - response.setWindowState(WindowState.MAXIMIZED); - response.setRenderParameter("jspPage", "/html/farmrepository/show_all_versions.jsp"); - } - - - public void serveResource(ResourceRequest resourceRequest, ResourceResponse resourceResponse) throws IOException, PortletException { - //if download file - String fileToDownloadId = ParamUtil.getString(resourceRequest, "fileToDownloadId", null); - //if download version - String versionDownloadItemId = ParamUtil.getString(resourceRequest, "versionDownloadItemId", null); - String versionDownloadName = ParamUtil.getString(resourceRequest, "versionDownloadName", null); - - setAuthorizationToken(resourceRequest); - //check if is a file download - if (fileToDownloadId != null) { - String selectedItemId = fileToDownloadId; - try { - ItemManagerClient client = AbstractPlugin.item().build(); - StreamDescriptor streamDescr = client.download(selectedItemId); - HttpServletResponse httpRes = PortalUtil.getHttpServletResponse(resourceResponse); - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(resourceRequest); - ServletResponseUtil.sendFile(httpReq,httpRes, streamDescr.getFileName(), streamDescr.getStream(), "application/download"); - streamDescr.getStream().close(); - } catch (Exception e) { - e.printStackTrace(); - } - } - else if (versionDownloadItemId != null && versionDownloadName != null) { //check if download version - GCubeUser currentUser = Utils.getCurrentUser(resourceRequest); - String context = Utils.getCurrentContext(resourceRequest); - Workspace ws = Utils.getWS(currentUser.getUsername(), context) ; - WorkspaceItem theItem; - try { - theItem = ws.getItem(versionDownloadItemId); - if (theItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) theItem; - InputStream is = file.downloadVersion(versionDownloadName); - HttpServletResponse httpRes = PortalUtil.getHttpServletResponse(resourceResponse); - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(resourceRequest); - ServletResponseUtil.sendFile(httpReq,httpRes, versionDownloadName+"_"+file.getName(), is, "application/download"); - } - } catch (ItemNotFoundException | InternalErrorException e) { - e.printStackTrace(); - } - - } - - } - - /** - * set the authorization token in Thread local and return the current {@link AuthorizedUser} instance - * @param request - * @return - */ - private void setAuthorizationToken(ResourceRequest request) { - GCubeUser currentUser = Utils.getCurrentUser(request); - String scope = Utils.getCurrentContext(request); - String authorizationToken = Utils.getCurrentUserToken(scope, currentUser.getUsername()); - SecurityTokenProvider.instance.set(authorizationToken); - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/EmptyFormsConfigurationAction.java b/src/main/java/org/gcube/portlets/user/performfish/EmptyFormsConfigurationAction.java deleted file mode 100644 index c9098b6..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/EmptyFormsConfigurationAction.java +++ /dev/null @@ -1,30 +0,0 @@ -package org.gcube.portlets.user.performfish; -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletConfig; -import javax.portlet.PortletPreferences; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import com.liferay.portal.kernel.log.Log; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.portlet.DefaultConfigurationAction; - -public class EmptyFormsConfigurationAction extends DefaultConfigurationAction { - private static Log _log = LogFactoryUtil.getLog(EmptyFormsConfigurationAction.class); - @Override - public void processAction(PortletConfig portletConfig, ActionRequest actionRequest, ActionResponse actionResponse) throws Exception { - super.processAction(portletConfig, actionRequest, actionResponse); - PortletPreferences prefs = actionRequest.getPreferences(); - String phaseValue = prefs.getValue("phase", ""); - _log.info("selected phase to display= " + phaseValue + " in EmptyFormsConfigurationAction.processAction() saved correctly"); - } - - @Override - public String render(PortletConfig portletConfig, - RenderRequest renderRequest, RenderResponse renderResponse) - throws Exception { - return "/html/emptyformsdocumentsdisplay/empty_forms_config.jsp"; - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/EmptyFormsDocumentsDisplay.java b/src/main/java/org/gcube/portlets/user/performfish/EmptyFormsDocumentsDisplay.java deleted file mode 100644 index 713bc05..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/EmptyFormsDocumentsDisplay.java +++ /dev/null @@ -1,220 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.ByteArrayInputStream; -import java.io.File; -import java.io.IOException; -import java.io.InputStream; -import java.net.URLEncoder; -import java.util.ArrayList; -import java.util.Date; -import java.util.List; - -import javax.portlet.PortletException; -import javax.portlet.PortletPreferences; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.ResourceRequest; -import javax.portlet.ResourceResponse; -import javax.servlet.http.HttpServletRequest; -import javax.servlet.http.HttpServletResponse; - -import org.gcube.common.authorization.library.provider.SecurityTokenProvider; -import org.gcube.common.homelibrary.home.exceptions.InternalErrorException; -import org.gcube.common.homelibrary.home.workspace.Workspace; -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceItem; -import org.gcube.common.homelibrary.home.workspace.exceptions.ItemNotFoundException; -import org.gcube.common.homelibrary.home.workspace.folder.FolderItem; -import org.gcube.common.homelibrary.home.workspace.folder.items.ExternalFile; -import org.gcube.common.homelibrary.util.WorkspaceUtil; -import org.gcube.common.scope.api.ScopeProvider; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - -import com.liferay.portal.kernel.json.JSONFactoryUtil; -import com.liferay.portal.kernel.json.JSONObject; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.ServletResponseUtil; -import com.liferay.portal.kernel.upload.FileItem; -import com.liferay.portal.kernel.upload.UploadPortletRequest; -import com.liferay.portal.kernel.util.FileUtil; -import com.liferay.portal.kernel.util.GetterUtil; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.kernel.util.StringPool; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class EmptyFormsDocumentsDisplay - */ -public class EmptyFormsDocumentsDisplay extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(EmptyFormsDocumentsDisplay.class); - - public static final String FOLDERID_PREFERENCE_ATTR_NAME = "folderId"; - private final static String RESOURCE_URL_ID = "uploadFiles"; - private final static String UPLOADED_FILE_ATTR_NAME = "myfile"; - private static String XLS_MIMETYPE = "application/vnd.ms-excel"; - private static String XLSX_MIMETYPE = "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"; - public static final String ATTACHMENT_FOLDER ="_uploaded_forms"; - private static RoleManager RM = new LiferayRoleManager(); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of EmptyFormsDocumentsDisplay"); - try { - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - GCubeTeam theFarm = null; - if (farmIds == null || farmIds.length == 0 ) { - if (Utils.getUserFarmsNumber(request, response, this) < 2) { - theFarm = Utils.checkBelongingToOneFarmOnly(request, response, this); - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - } - else { //the farmId is passed via param on the query string - long selectedFarmId = Utils.unmaskId(farmIds[0]); - theFarm = RM.getTeam(selectedFarmId); - if (Utils.checkBelongsToTeam(PortalUtil.getUserId(request), theFarm.getTeamId(), PortalUtil.getScopeGroupId(request)) ) {//check that the user belong ot the farm - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } - if (theFarm != null) { - setGuestAuthorizationToken(request); - PortletPreferences portletPreferences = request.getPreferences(); - String folderId = GetterUtil.getString(portletPreferences.getValue(FOLDERID_PREFERENCE_ATTR_NAME, StringPool.BLANK)); - if (folderId != null && !folderId.equals("")) { - String context = Utils.getCurrentContext(request); - Workspace ws = Utils.getWS("guest", context) ; - String selectedPhase = GetterUtil.getString(portletPreferences.getValue(PFISHConstants.PHASE_PREFERENCE_ATTR_NAME, StringPool.BLANK)); - //in theChildren expected to find 3 subfolders: Utils.SHOW_HATCHERY, SHOW_PRE_ONGROWING .. - for (WorkspaceItem item : ws.getItem(folderId).getChildren()) { - if (item.getName().equalsIgnoreCase(selectedPhase)) { - List thefiles = item.getChildren(); - List theSheets = new ArrayList<>(); - List theInstructions = new ArrayList<>(); - ListtheSheetNames = new ArrayList<>(); - //separate from instructions - for (WorkspaceItem workspaceItem : thefiles) { - if (workspaceItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) workspaceItem; - if (file.getMimeType().equals(XLS_MIMETYPE) || file.getMimeType().equals(XLSX_MIMETYPE)) { //is a form - theSheets.add(file); - theSheetNames.add("'"+file.getName()+"'"); //serializing for Javascript - } - else - theInstructions.add(file); - } - } - request.setAttribute("theSheetNames", theSheetNames); //pass to the JSP - request.setAttribute("theSheets", theSheets); //pass to the JSP - request.setAttribute("theInstructions", theInstructions); //pass to the JSP - break; - } - } - } - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.TOO_MANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - - } catch (Exception e) { - e.printStackTrace(); - } - } - - public void serveResource(ResourceRequest resourceRequest, ResourceResponse resourceResponse) throws IOException, PortletException { - _log.debug("serveResource ..."); - String resourceID = resourceRequest.getResourceID(); - if (resourceID != null && resourceID.equals(RESOURCE_URL_ID)) { - _log.debug("Upload File"); - UploadPortletRequest uploadRequest = PortalUtil.getUploadPortletRequest(resourceRequest); - File multipartFile = uploadRequest.getFile(UPLOADED_FILE_ATTR_NAME); - - FileItem[] items = uploadRequest.getMultipartParameterMap().get(UPLOADED_FILE_ATTR_NAME); - String fileName = ""; - String contentType = ""; - for (int i = 0; i < items.length; i++) { - fileName = items[i].getFileName(); - contentType = items[i].getContentType(); - _log.debug(fileName); - _log.debug(contentType); - } - JSONObject fileObject = JSONFactoryUtil.createJSONObject(); - try { - String context = Utils.getCurrentContext(resourceRequest); - _log.debug("upload file, context="+context); - String username = Utils.getCurrentUser(resourceRequest).getUsername(); - String authorizationToken = Utils.getCurrentUserToken(context, username ); - SecurityTokenProvider.instance.set(authorizationToken); - ScopeProvider.instance.set(context); - Workspace workspace = Utils.getWS(username, context) ; - String wsItemId = uploadToUserWorkspace(workspace, fileName, contentType, new ByteArrayInputStream(FileUtil.getBytes(multipartFile))); - String toReturn = workspace.getItem(wsItemId).getPublicLink(false); - fileObject.put("fileName", fileName); - fileObject.put("urlEncoded", URLEncoder.encode(toReturn, "UTF-8")); - } catch (Exception e) { - _log.error("There was an error uploading the file " + fileName, e); - } - - resourceResponse.getWriter().println(fileObject); - } - else { - _log.debug("Download Original File"); - //if download file - String fileToDownloadId = ParamUtil.getString(resourceRequest, "fileToDownloadId", null); - String context = Utils.getCurrentContext(resourceRequest); - Workspace ws = Utils.getWS("guest", context) ; - WorkspaceItem theItem; - try { - theItem = ws.getItem(fileToDownloadId); - if (theItem instanceof ExternalFile) { - ExternalFile file = (ExternalFile) theItem; - InputStream is = file.getData(); - HttpServletResponse httpRes = PortalUtil.getHttpServletResponse(resourceResponse); - HttpServletRequest httpReq = PortalUtil.getHttpServletRequest(resourceRequest); - ServletResponseUtil.sendFile(httpReq,httpRes, file.getName(), is, "application/download"); - } - } catch (ItemNotFoundException | InternalErrorException e) { - e.printStackTrace(); - } - } - - - } - /** - * set the authorization token in Thread local and return the current {@link AuthorizedUser} instance - * @param request - * @return - */ - private void setGuestAuthorizationToken(RenderRequest request) { - String scope = Utils.getCurrentContext(request); - String authorizationToken = Utils.getCurrentUserToken(scope, "guest"); - SecurityTokenProvider.instance.set(authorizationToken); - } - - private String uploadToUserWorkspace(Workspace ownerWS, String fileName, String mimeType,InputStream fileData) throws Exception { - WorkspaceFolder attachmentDirectory = null; - try{ - attachmentDirectory = (WorkspaceFolder) ownerWS.getItemByPath(ownerWS.getRoot().getPath() + "/" + ATTACHMENT_FOLDER); - } catch (ItemNotFoundException e) { - _log.info(ATTACHMENT_FOLDER + " Workspace Folder does not exists, creating it "); - attachmentDirectory = ownerWS.getRoot().createFolder(ATTACHMENT_FOLDER, "Folder created automatically by the System"); - } - System.out.println("attachmentDirectory="+attachmentDirectory); - String itemName = WorkspaceUtil.getUniqueName(fileName, attachmentDirectory); - FolderItem item = WorkspaceUtil.createExternalFile(attachmentDirectory, itemName, "System created upon user form submission " + new Date(), mimeType, fileData); - String toReturn = item.getId(); - _log.debug("Uploaded " + item.getName() + " - Returned Workspace id=" +toReturn); - return toReturn; - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageAssociations.java b/src/main/java/org/gcube/portlets/user/performfish/ManageAssociations.java deleted file mode 100644 index 88574e6..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageAssociations.java +++ /dev/null @@ -1,71 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.LinkedHashMap; -import java.util.List; - -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.portlets.user.performfish.bean.Association; -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.GroupLocalServiceUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageAssociations - */ -public class ManageAssociations extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageCompanies.class); - - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of ManageAssociations"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - String vreName = GroupLocalServiceUtil.getGroup(groupId).getName(); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List associations = DBUtil.getAllAssociations(conn); - LinkedHashMap> associationCompanies = new LinkedHashMap<>(); - - for (Association ass : associations) { - Team theTeam = TeamLocalServiceUtil.getTeam(ass.getAssociationId()); - ass.setShortName(theTeam.getName()); - ass.setFullName(theTeam.getDescription()); - ass.setImageUrl(Utils.getCompanyLogoURL(ass.getShortName(), groupId, request)); - List companIds = DBUtil.getCompaniesIdsByAssociation(conn, ass.getAssociationId()); - List children = new ArrayList<>(); - for (Long companId : companIds) { - Team theCompany = TeamLocalServiceUtil.getTeam(companId); - Company toAdd = new Company(companId, ass.getAssociationId(), false); - toAdd.setName(theCompany.getName()); - toAdd.setImageUrl(Utils.getCompanyLogoURL(theCompany.getName(), groupId, request)); - children.add(toAdd); - } - associationCompanies.put(ass, children); - } - request.setAttribute("associations", associations); - request.setAttribute("associationCompanies", associationCompanies); - request.setAttribute("vreName", vreName); - - - super.render(request, response); - - } catch (Exception e) { - e.printStackTrace(); - } - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageCompanies.java b/src/main/java/org/gcube/portlets/user/performfish/ManageCompanies.java deleted file mode 100644 index 27b6193..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageCompanies.java +++ /dev/null @@ -1,111 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.service.GroupLocalServiceUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageCompanies - */ -public class ManageCompanies extends MVCPortlet { - - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageCompanies.class); - - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of ManageCompanies"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - String vreName = GroupLocalServiceUtil.getGroup(groupId).getName(); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List companies = DBUtil.getCompanies(conn); - for (Company company : companies) { - company.setName(TeamLocalServiceUtil.getTeam(company.getCompanyId()).getName()); - company.setImageUrl(Utils.getCompanyLogoURL(company.getName(), groupId, request)); - } - request.setAttribute("companies", companies); - request.setAttribute("vreName", vreName); - - - super.render(request, response); - - } catch (Exception e) { - e.printStackTrace(); - } - } - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeCompanies(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername", "unknown"); - _log.info("removeCompanies action request from " + currentUsername); - long groupId = ParamUtil.getLong(actionRequest, "groupId"); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - try { - String[] companyIdsToRemove = ParamUtil.getParameterValues(actionRequest, "removeCompanyIds"); - if (companyIdsToRemove.length > 0) { - _log.info("removeCompanyIds writing to DB now ..."); - boolean result = DBUtil.removeCompany(conn, companyIdsToRemove); - if (!result) { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - - } - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void manageCompanyFarms(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername", "unknown"); - _log.info("manageCompanyFarms action request from " + currentUsername); - String[] companyIdsToManage = ParamUtil.getParameterValues(actionRequest, "companyIds"); - if (companyIdsToManage.length == 1) { - System.out.println("tutto ok"); - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageCompanyAdmins.java b/src/main/java/org/gcube/portlets/user/performfish/ManageCompanyAdmins.java deleted file mode 100644 index 12e2f01..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageCompanyAdmins.java +++ /dev/null @@ -1,139 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.portlets.user.performfish.bean.CompanyMember; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageCompanyAdmins - */ -public class ManageCompanyAdmins extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageCompanyAdmins.class); - - @Override - public void render(RenderRequest request, RenderResponse response) throws PortletException, IOException { - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theTeam = Utils.checkBelongingToOneCompanyOnly(request, response, this); - request.setAttribute("theTeam", TeamLocalServiceUtil.getTeam(theTeam.getTeamId())); - RoleManager rm = new LiferayRoleManager(); - if (theTeam != null && Utils.isCompanyAdmin(Utils.getCurrentUser(request), groupId, theTeam)) { //check is Admin - //check folder exists - Utils.getWSCompanyFolder(Utils.getCurrentUser(request).getUsername(), Utils.getCurrentContext(request), theTeam); - - List companyAdmins = Utils.getCompanyAdminTeamMembers(theTeam.getTeamId(), theTeam.getGroupId()); - for (CompanyMember member : companyAdmins) { //anonymising email - member.setEmail(member.getUser().getEmail()); - List theFarms = Utils.getFarmsByUserId(member.getUserId(), theTeam.getTeamId(), groupId); - if (theFarms != null && !theFarms.isEmpty()) { - GCubeTeam theFarmTeam = rm.getTeam(theFarms.get(0).getFarmId()); - member.setAssociatedFarms(theFarms); - member.setAdmin(Utils.isFarmAdmin(member.getUser(), groupId, theFarmTeam)); - } - } - - request.setAttribute("companyAdmins", companyAdmins); //pass to the JSP - - String imageUrl = Utils.getCompanyLogoURL(theTeam.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - - } catch (Exception e) { - e.printStackTrace(); - } - } - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeAdministratorRoleFromUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - long[] userIdsToRemoveFromCompanyAdmins = ParamUtil.getLongValues(actionRequest, "removeUserIds"); - long teamId = ParamUtil.getLong(actionRequest, "teamId"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - _log.info(currentUsername + " has requested the deletion of some user(s) from company administrator having id="+teamId ); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.COMPANY_ADMIN_SITE_ROLE, currentGroupId); - for (int i = 0; i < userIdsToRemoveFromCompanyAdmins.length; i++) { - rm.removeRoleFromUser(userIdsToRemoveFromCompanyAdmins[i], currentGroupId, adminRole.getRoleId()); - _log.info("removing role from user with id " + userIdsToRemoveFromCompanyAdmins[i] + " done"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeFarmUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long companyUserId = ParamUtil.getLong(actionRequest, "companyUserId"); - long companyId = ParamUtil.getLong(actionRequest, "companyId"); - String context = Utils.getCurrentContext(currentGroupId); - _log.info(currentUsername + " has requested the deletion of userid " + companyUserId + " from farms in context="+context); - List theUserFarms = Utils.getFarmsByUserId(companyUserId, companyId, currentGroupId); - for (Farm farm : theUserFarms) { - removeFromFarm(farm.getFarmId(), currentGroupId, companyUserId); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } - - private boolean removeFromFarm(long farmId, long currentGroupId, long companyUserId) throws Exception { - Team team = TeamLocalServiceUtil.getTeam(farmId);//check that the farm is real - TeamLocalServiceUtil.deleteUserTeam(companyUserId, team.getTeamId()); - _log.info("removing user from farm Done"); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, currentGroupId); - _log.info("removing role from user with id " + companyUserId); - return rm.removeRoleFromUser(companyUserId, currentGroupId, adminRole.getRoleId()); - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageCompanyUsers.java b/src/main/java/org/gcube/portlets/user/performfish/ManageCompanyUsers.java deleted file mode 100644 index 49c6b28..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageCompanyUsers.java +++ /dev/null @@ -1,160 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.Collections; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceSharedFolder; -import org.gcube.portlets.user.performfish.bean.CompanyMember; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.CompanyMemberComparator; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageCompanyUsers - */ -public class ManageCompanyUsers extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageCompanyUsers.class); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of ManageCompanyusers"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theTeam = Utils.checkBelongingToOneCompanyOnly(request, response, this); - request.setAttribute("theTeam", TeamLocalServiceUtil.getTeam(theTeam.getTeamId())); - RoleManager rm = new LiferayRoleManager(); - if (theTeam != null && Utils.isCompanyAdmin(Utils.getCurrentUser(request), groupId, theTeam)) { //check is Admin - //check folder exists - Utils.getWSCompanyFolder(Utils.getCurrentUser(request).getUsername(), Utils.getCurrentContext(request), theTeam); - List companyMembers = Utils.getRegularCompanyMembers(theTeam.getTeamId(), theTeam.getGroupId()); - for (CompanyMember member : companyMembers) { //anonymising email - member.setEmail(member.getUser().getEmail()); - List theFarms = Utils.getFarmsByUserId(member.getUserId(), theTeam.getTeamId(), groupId); - if (theFarms != null && !theFarms.isEmpty()) { - GCubeTeam theFarmTeam = rm.getTeam(theFarms.get(0).getFarmId()); - member.setAssociatedFarms(theFarms); - member.setAdmin(Utils.isFarmAdmin(member.getUser(), groupId, theFarmTeam)); - } - } - Collections.sort(companyMembers, new CompanyMemberComparator()); - request.setAttribute("companyMembers", companyMembers); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theTeam.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeCompanUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - String[] usernamesToRemoveFromCompany = ParamUtil.getParameterValues(actionRequest, "removeUserIds"); - long teamId = ParamUtil.getLong(actionRequest, "teamId"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - String context = Utils.getCurrentContext(currentGroupId); - _log.info(currentUsername + " has requested the deletion of some user(s) from company having id="+teamId + " in context="+context); - LiferayRoleManager rm = new LiferayRoleManager(); - LiferayUserManager um = new LiferayUserManager(); - GCubeTeam team = rm.getTeam(teamId); - WorkspaceFolder wsFolder = Utils.getWSCompanyFolder(currentUsername, context, team); - if (wsFolder.isShared()) { - WorkspaceSharedFolder sharedFolder = (WorkspaceSharedFolder) wsFolder; - for (int i = 0; i < usernamesToRemoveFromCompany.length; i++) { - _log.info("Unsharing user =>"+usernamesToRemoveFromCompany[i]); - sharedFolder.unShare(usernamesToRemoveFromCompany[i]); - _log.info("Unsharing OK removing user from team =>"+usernamesToRemoveFromCompany[i]); - long userId = um.getUserByUsername(usernamesToRemoveFromCompany[i]).getUserId(); - TeamLocalServiceUtil.deleteUserTeam(userId, team.getTeamId()); - List thePossibleFarms = Utils.getFarmsByUserId(userId, teamId, currentGroupId); - if (thePossibleFarms != null && !thePossibleFarms.isEmpty()) { - for (Farm farm : thePossibleFarms) { - removeFromFarm(farm.getFarmId(), currentGroupId, userId); - } - } - _log.info("removing user from team Done"); - } - } - else { - SessionErrors.add(actionRequest.getPortletSession(), "operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } - - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeFarmUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long companyUserId = ParamUtil.getLong(actionRequest, "companyUserId"); - long companyId = ParamUtil.getLong(actionRequest, "companyId"); - String context = Utils.getCurrentContext(currentGroupId); - _log.info(currentUsername + " has requested the deletion of userid " + companyUserId + " from farms in context="+context); - List theUserFarms = Utils.getFarmsByUserId(companyUserId, companyId, currentGroupId); - for (Farm farm : theUserFarms) { - removeFromFarm(farm.getFarmId(), currentGroupId, companyUserId); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } - - private boolean removeFromFarm(long farmId, long currentGroupId, long companyUserId) throws Exception { - Team team = TeamLocalServiceUtil.getTeam(farmId);//check that the farm is real - TeamLocalServiceUtil.deleteUserTeam(companyUserId, team.getTeamId()); - _log.info("removing user from farm Done"); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, currentGroupId); - _log.info("removing role from user with id " + companyUserId); - return rm.removeRoleFromUser(companyUserId, currentGroupId, adminRole.getRoleId()); - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageFarmAdministrators.java b/src/main/java/org/gcube/portlets/user/performfish/ManageFarmAdministrators.java deleted file mode 100644 index 5ac752b..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageFarmAdministrators.java +++ /dev/null @@ -1,130 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletMode; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.WindowState; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageFarmAdministrators - */ -public class ManageFarmAdministrators extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageFarmAdministrators.class); - private static RoleManager RM = new LiferayRoleManager(); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of ManageFarmAdministrators"); - try { - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - long[] farmIds2 = ParamUtil.getLongValues(httpReq, "farmId"); - GCubeTeam theFarm = null; - if ((farmIds == null || farmIds.length == 0) && (farmIds2 == null || farmIds2.length == 0)) { - if (Utils.getUserFarmsNumber(request, response, this) < 2) { - theFarm = Utils.checkBelongingToOneFarmOnly(request, response, this); - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - } - else { //the farmId (encrypted) or farmId2 (not encrypted) is passed via param on the query string - long selectedFarmId = 0; - if (farmIds != null && farmIds.length > 0) { - selectedFarmId = Utils.unmaskId(farmIds[0]); - } else - selectedFarmId = farmIds2[0]; - theFarm = RM.getTeam(selectedFarmId); - if (Utils.checkBelongsToTeam(PortalUtil.getUserId(request), theFarm.getTeamId(), PortalUtil.getScopeGroupId(request)) ) {//check that the user belong ot the farm - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - if (theCompany != null && theFarm !=null) { - request.setAttribute("theCompany", theCompany); - request.setAttribute("theFarm", TeamLocalServiceUtil.getTeam(theFarm.getTeamId())); - if (theCompany != null && Utils.isFarmAdmin(Utils.getCurrentUser(request), groupId, theCompany)) { //check is Admin - Boolean isCompanyAdministrator = Utils.isCompanyAdmin(Utils.getCurrentUser(request), groupId, theCompany); - request.setAttribute("isCompanyAdministrator", isCompanyAdministrator); - //check folder exists - Utils.getWSCompanyFolder(Utils.getCurrentUser(request).getUsername(), Utils.getCurrentContext(request), theCompany); - - List farmAdmins = Utils.getFarmAdminTeamMembers(theCompany, theFarm); - request.setAttribute("farmAdmins", farmAdmins); //pass to the JSP - - String imageUrl = Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_FARM_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.TOO_MANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_FARM_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - } - - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeAdministratorRoleFromUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - long[] userIdsToRemoveFromCompanyAdmins = ParamUtil.getLongValues(actionRequest, "removeUserIds"); - long teamId = ParamUtil.getLong(actionRequest, "teamId"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - _log.info(currentUsername + " has requested the deletion of some user(s) from company administrator having id="+teamId ); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, currentGroupId); - for (int i = 0; i < userIdsToRemoveFromCompanyAdmins.length; i++) { - rm.removeRoleFromUser(userIdsToRemoveFromCompanyAdmins[i], currentGroupId, adminRole.getRoleId()); - _log.info("removing role from user with id " + userIdsToRemoveFromCompanyAdmins[i] + " done"); - } - actionResponse.setPortletMode(PortletMode.VIEW); - actionResponse.setWindowState(WindowState.NORMAL); - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } -} \ No newline at end of file diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageFarmUsers.java b/src/main/java/org/gcube/portlets/user/performfish/ManageFarmUsers.java deleted file mode 100644 index 9aa4977..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageFarmUsers.java +++ /dev/null @@ -1,134 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.Collections; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletMode; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.WindowState; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.UserComparator; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageFarmUsers - */ -public class ManageFarmUsers extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageFarmUsers.class); - private static RoleManager RM = new LiferayRoleManager(); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.info(" This is render method of ManageFarmUsers"); - try { - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - long[] farmIds2 = ParamUtil.getLongValues(httpReq, "farmId"); - GCubeTeam theFarm = null; - if ((farmIds == null || farmIds.length == 0) && (farmIds2 == null || farmIds2.length == 0)) { - if (Utils.getUserFarmsNumber(request, response, this) < 2) { - theFarm = Utils.checkBelongingToOneFarmOnly(request, response, this); - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - } - else { //the farmId (encrypted) or farmId2 (not encrypted) is passed via param on the query string - long selectedFarmId = 0; - if (farmIds != null && farmIds.length > 0) { - selectedFarmId = Utils.unmaskId(farmIds[0]); - } else - selectedFarmId = farmIds2[0]; - theFarm = RM.getTeam(selectedFarmId); - if (Utils.checkBelongsToTeam(PortalUtil.getUserId(request), theFarm.getTeamId(), PortalUtil.getScopeGroupId(request)) ) {//check that the user belong ot the farm - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - if (theCompany != null && theFarm !=null) { - request.setAttribute("theCompany", theCompany); - if (theFarm != null && Utils.isFarmAdmin(Utils.getCurrentUser(request), groupId, theFarm)) { //check is Admin - request.setAttribute("theFarm", TeamLocalServiceUtil.getTeam(theFarm.getTeamId())); - //check folder exists - Utils.getWSCompanyFolder(Utils.getCurrentUser(request).getUsername(), Utils.getCurrentContext(request), theCompany); - List farmMembers = Utils.getRegularFarmMembers(theFarm.getTeamId(), theFarm.getGroupId()); - for (GCubeUser member : farmMembers) { //anonymising email - int n = member.getEmail().indexOf("@"); - member.setEmail("********"+member.getEmail().substring(n)); - } - Collections.sort(farmMembers, new UserComparator()); - request.setAttribute("farmMembers", farmMembers); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_FARM_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.TOO_MANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - /** - * - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void removeFarmUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - String[] usernamesToRemoveFromCompany = ParamUtil.getParameterValues(actionRequest, "removeUserIds"); - long farmId = ParamUtil.getLong(actionRequest, "farmId"); - String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - String context = Utils.getCurrentContext(currentGroupId); - _log.info(currentUsername + " has requested the deletion of some user(s) from farm having id="+farmId + " in context="+context); - LiferayRoleManager rm = new LiferayRoleManager(); - LiferayUserManager um = new LiferayUserManager(); - GCubeTeam team = rm.getTeam(farmId); - for (int i = 0; i < usernamesToRemoveFromCompany.length; i++) { - _log.info("removing user from farm =>"+usernamesToRemoveFromCompany[i]); - long userId = um.getUserByUsername(usernamesToRemoveFromCompany[i]).getUserId(); - TeamLocalServiceUtil.deleteUserTeam(userId, team.getTeamId()); - _log.info("removing user from farm Done"); - } - actionResponse.setPortletMode(PortletMode.VIEW); - actionResponse.setWindowState(WindowState.NORMAL); - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/ManageFarms.java b/src/main/java/org/gcube/portlets/user/performfish/ManageFarms.java deleted file mode 100644 index 8b0442b..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/ManageFarms.java +++ /dev/null @@ -1,277 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.Collections; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.comparators.FarmComparator; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.model.Layout; -import com.liferay.portal.model.ResourceConstants; -import com.liferay.portal.model.ResourcePermission; -import com.liferay.portal.model.Role; -import com.liferay.portal.security.permission.ActionKeys; -import com.liferay.portal.service.LayoutServiceUtil; -import com.liferay.portal.service.ResourcePermissionLocalServiceUtil; -import com.liferay.portal.service.RoleLocalServiceUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class ManageFarms - */ -public class ManageFarms extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ManageCompanies.class); - private static RoleManager RM = new LiferayRoleManager(); - @Override - public void render(RenderRequest request, RenderResponse response) throws PortletException, IOException { - try { - long groupId = PortalUtil.getScopeGroupId(request); - - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - if (theCompany != null && Utils.isCompanyAdmin(Utils.getCurrentUser(request), groupId, theCompany)) { //check is Admin - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List farms = DBUtil.listFarmsByCompanyId(conn, theCompany.getTeamId()); - for (Farm farm : farms) { - GCubeTeam theFarm = RM.getTeam(farm.getFarmId()); - farm.setName(theFarm.getTeamName()); - farm.setDateCreated(theFarm.getCreatedate()); - farm.setImageUrl(Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request)); - List farmAdmins = Utils.getFarmAdminTeamMembers(theCompany, theFarm); - farm.setAdministrators(farmAdmins); - } - Collections.sort(farms, new FarmComparator()); - request.setAttribute("farms", farms); - request.setAttribute("company", theCompany); - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - - } catch (Exception e) { - e.printStackTrace(); - } - } - - - /** - * Delete FARM - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void deleteFarm(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - _log.info("deleteFarm ActionRequest="); - long groupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long companyId = ParamUtil.getLong(actionRequest, "CompanyId"); - long farmId = ParamUtil.getLong(actionRequest, "FarmId"); - try { - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - if (groupId > 0 && companyId > 0 && farmId > 0) { - long userId = PortalUtil.getUserId(actionRequest); - String username = Utils.getCurrentUser(userId).getUsername(); - String context = Utils.getCurrentContext(groupId); - GCubeTeam theFarm = RM.getTeam(farmId); - GCubeTeam theCompany = RM.getTeam(companyId); - _log.info("Trying Delete Farm with name " + theFarm.getTeamName() + " of Company: " + theCompany.getTeamName()); - WorkspaceFolder farmFolder = Utils.getWSFarmFolder(username, context, theCompany, theFarm); - Utils.getWS(username, context).removeItem(farmFolder.getId()); - _log.info(username + " Deleted Farm Folder with Id = "+farmId + " deleting farm row DB now "); - boolean resultDeleteFarmDB = DBUtil.deleteFarm(conn, farmId); - if (!resultDeleteFarmDB) { - renderErrorPage(actionRequest, actionResponse); - } - TeamLocalServiceUtil.deleteTeam(farmId); - } - else - renderErrorPage(actionRequest, actionResponse); - } catch (Exception e) { - e.printStackTrace(); - renderErrorPage(actionRequest, actionResponse); - } - } - /** - * Edit FARM - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void editFarm(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - long groupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long companyId = ParamUtil.getLong(actionRequest, "CompanyId"); - long farmId = ParamUtil.getLong(actionRequest, "FarmId"); - String farmName = ParamUtil.getString(actionRequest, "farmName"); - String farmLocation = ParamUtil.getString(actionRequest, "Location", ""); - try { - Connection dbConnection = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - if (groupId > 0 && companyId > 0 && !farmName.equals("")) { - //edit the team first - String companyName = TeamLocalServiceUtil.getTeam(companyId).getName(); - String theNewFarmName = farmName.trim(); - GCubeTeam editedFarm = null; - try { - editedFarm = new LiferayRoleManager().updateTeam(farmId, theNewFarmName, theNewFarmName + " is a farm belonging to " + companyName); - } - catch (Exception e) { - _log.error("editFarm error ... farm team name may exists already"); - renderErrorPageFarmExistAlready(actionRequest, actionResponse); - return; - } - if (editedFarm != null) { - _log.info("editedFarm writing to DB now ... farm team edited with id="+editedFarm.getTeamId()); - boolean resultUpdate = DBUtil.editFarm(dbConnection, editedFarm.getTeamId(), theNewFarmName, farmLocation); - if (!resultUpdate) { - renderErrorPage(actionRequest, actionResponse); - } - } - else { - renderErrorPage(actionRequest, actionResponse); - } - } - else - renderErrorPage(actionRequest, actionResponse); - } catch (Exception e) { - e.printStackTrace(); - renderErrorPage(actionRequest, actionResponse); - } - } - - - /** - * ADD FARM - * @param actionRequest - * @param actionResponse - * @throws Exception - */ - public void addFarm(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - long groupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long companyId = ParamUtil.getLong(actionRequest, "CompanyId"); - String farmName = ParamUtil.getString(actionRequest, "farmName"); - String farmLocation = ParamUtil.getString(actionRequest, "Location", ""); - String theCreatorFullName = ParamUtil.getString(actionRequest, "theCreatorFullName", ""); - try { - Connection dbConnection = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - if (groupId > 0 && companyId > 0 && !farmName.equals("")) { - //create the team first - String companyName = TeamLocalServiceUtil.getTeam(companyId).getName(); - String theFarmName = farmName.trim(); - GCubeTeam newFarm = null; - try { - newFarm = new LiferayRoleManager().createTeam(groupId, theFarmName, farmName + " is a farm belonging to " + companyName); - } - catch (Exception e) { - _log.error("addFarm error ... farm team name may exists already"); - renderErrorPageFarmExistAlready(actionRequest, actionResponse); - return; - } - if (newFarm != null) { - _log.info("addFarm writing to DB now ... farm team created with id="+newFarm.getTeamId()); - boolean resultInsert = DBUtil.addFarm(dbConnection, newFarm.getTeamId(), companyId, theFarmName, farmLocation, theCreatorFullName); - boolean resultAssignPermissions = assignToFarmTheCompanyPermissions(groupId, companyId, newFarm.getTeamId()); - if (! (resultInsert && resultAssignPermissions) ) { - renderErrorPage(actionRequest, actionResponse); - } - } - else - renderErrorPage(actionRequest, actionResponse); - } - else - renderErrorPage(actionRequest, actionResponse); - } catch (Exception e) { - e.printStackTrace(); - renderErrorPage(actionRequest, actionResponse); - } - } - /** - * - * @param groupId - * @return the layout objects of the pages for the phases enabled for a given company (e.g. phases: Hatchery, Growout) - * @throws Exception - */ - private List getCompanyEnabledPhasesLayout(long groupId, long companyTeamId) throws Exception { - - List toReturn = new ArrayList<>(); - List all3phases = new ArrayList<>(); - List pages = LayoutServiceUtil.getLayouts(groupId, true); - for (Layout layout : pages) { - if (layout.getFriendlyURL().equalsIgnoreCase(PFISHConstants.GROWOUT_PAGE_LAYOUT_FRIENDLY_URL) || - layout.getFriendlyURL().equalsIgnoreCase(PFISHConstants.HATCHERY_PAGE_LAYOUT_FRIENDLY_URL) || - layout.getFriendlyURL().equalsIgnoreCase(PFISHConstants.PREGROW_PAGE_LAYOUT_FRIENDLY_URL)) { - all3phases.add(layout); - } - } - final long defaultCompanyId = PortalUtil.getDefaultCompanyId(); - Role teamRoleCompany = RoleLocalServiceUtil.getTeamRole(defaultCompanyId, companyTeamId); - List rPermissions = ResourcePermissionLocalServiceUtil.getRoleResourcePermissions(teamRoleCompany.getRoleId()); - - for (Layout layout : all3phases) { - for (ResourcePermission rp : rPermissions) { - if (layout.getPrimaryKey() == Long.parseLong(rp.getPrimKey()) && rp.getActionIds() == 1) { //tha actiondId has to be 1 - toReturn.add(layout); - } - } - } - return toReturn; - } - - /** - * - * @param groupId - * @param companyTeamId - * @param farmTeamId - * @return - */ - private boolean assignToFarmTheCompanyPermissions(long groupId, long companyTeamId, long farmTeamId) { - try { - final long defaultCompanyId = PortalUtil.getDefaultCompanyId(); - List layoutCompanyPhases = getCompanyEnabledPhasesLayout(groupId, companyTeamId); - Role teamRoleFarm = RoleLocalServiceUtil.getTeamRole(defaultCompanyId, farmTeamId); - - for (Layout phase : layoutCompanyPhases) { - _log.info("setting Resource Permissions for farm with id = " + farmTeamId); - ResourcePermissionLocalServiceUtil.setResourcePermissions( - defaultCompanyId, Layout.class.getName(), ResourceConstants.SCOPE_INDIVIDUAL, String.valueOf(phase.getPrimaryKey()), teamRoleFarm.getRoleId(), - new String[] { ActionKeys.VIEW }); - } - return true; - } catch (Exception e) { - e.printStackTrace(); - return false; - } - } - - private void renderErrorPage(ActionRequest actionRequest, ActionResponse actionResponse) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", PFISHConstants.OPERATION_ERROR_PATH); - } - - private void renderErrorPageFarmExistAlready(ActionRequest actionRequest, ActionResponse actionResponse) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", PFISHConstants.FARM_NAME_ALREADY_EXIST_ERROR_PATH); - } -} \ No newline at end of file diff --git a/src/main/java/org/gcube/portlets/user/performfish/PromoteCompanyAdministrators.java b/src/main/java/org/gcube/portlets/user/performfish/PromoteCompanyAdministrators.java deleted file mode 100644 index 6041ac4..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/PromoteCompanyAdministrators.java +++ /dev/null @@ -1,81 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; - -import org.gcube.portlets.user.performfish.bean.CompanyMember; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class PromoteCompanyAdministrators - */ -public class PromoteCompanyAdministrators extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(PromoteCompanyAdministrators.class); - - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.debug(" This is render method of PromoteCompanyAdministrators"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theTeam = Utils.checkBelongingToOneCompanyOnly(request, response, this); - request.setAttribute("theTeam", TeamLocalServiceUtil.getTeam(theTeam.getTeamId())); - if (theTeam != null && Utils.isCompanyAdmin(Utils.getCurrentUser(request), groupId, theTeam)) { //check is Admin - //check folder exists - Utils.getWSCompanyFolder(Utils.getCurrentUser(request).getUsername(), Utils.getCurrentContext(request), theTeam); - - List companyAdmins = Utils.getCompanyAdminTeamMembers(theTeam.getTeamId(), theTeam.getGroupId()); - request.setAttribute("companyAdmins", companyAdmins); //pass to the JSP - - String imageUrl = Utils.getCompanyLogoURL(theTeam.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - - } catch (Exception e) { - e.printStackTrace(); - } - } - - public void promoteAdminUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - long[] userIdsToPromoteAdmins = ParamUtil.getLongValues(actionRequest, "addUserIds"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.COMPANY_ADMIN_SITE_ROLE, currentGroupId); - for (int i = 0; i < userIdsToPromoteAdmins.length; i++) { - rm.assignRoleToUser(userIdsToPromoteAdmins[i], currentGroupId, adminRole.getRoleId()); - _log.info("Associating Admin role to user with id " + userIdsToPromoteAdmins[i] + " done"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/PromoteFarmAdministrators.java b/src/main/java/org/gcube/portlets/user/performfish/PromoteFarmAdministrators.java deleted file mode 100644 index e9e3ab6..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/PromoteFarmAdministrators.java +++ /dev/null @@ -1,92 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class PromoteFarmAdministrators - */ -public class PromoteFarmAdministrators extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(PromoteFarmAdministrators.class); - private static RoleManager RM = new LiferayRoleManager(); - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.debug(" This is render method of PromoteFarmAdministrators"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - GCubeTeam theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - //long[] farmIds = ParamUtil.getLongValues(httpReq, "farmId"); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - - GCubeTeam theFarm = null; - if (farmIds != null && farmIds.length > 0) { - long selectedFarmId = Utils.unmaskId(farmIds[0]); - theFarm = RM.getTeam(selectedFarmId); - request.getPortletSession().setAttribute("theFarm", theFarm); - } else { - theFarm = (GCubeTeam) request.getPortletSession().getAttribute("theFarm"); - } - if (theFarm != null && Utils.isFarmAdmin(Utils.getCurrentUser(request), groupId, theFarm)) { //check is a Farm Admin - //check folder exists - Utils.getWSCompanyFolder(Utils.getCurrentUser(request).getUsername(), Utils.getCurrentContext(request), theFarm); - - List companyAdmins = Utils.getFarmAdminTeamMembers(theCompany, theFarm); - request.setAttribute("companyAdmins", companyAdmins); //pass to the JSP - request.setAttribute("theFarm", theFarm); //pass to the JSP - String imageUrl = Utils.getCompanyLogoURL(theCompany.getTeamName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - //display the view.jsp - super.render(request, response); - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_FARM_ADMIN_PAGE_PATH); - dispatcher.include(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - - public void promoteAdminUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - long[] userIdsToPromoteAdmins = ParamUtil.getLongValues(actionRequest, "addUserIds"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, currentGroupId); - for (int i = 0; i < userIdsToPromoteAdmins.length; i++) { - rm.assignRoleToUser(userIdsToPromoteAdmins[i], currentGroupId, adminRole.getRoleId()); - _log.info("Associating Admin role to user with id " + userIdsToPromoteAdmins[i] + " done"); - } - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/SetCompanyAdministratorsSuperUser.java b/src/main/java/org/gcube/portlets/user/performfish/SetCompanyAdministratorsSuperUser.java deleted file mode 100644 index 26fc2db..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/SetCompanyAdministratorsSuperUser.java +++ /dev/null @@ -1,131 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.sql.Connection; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.service.UserLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; -//TODO check why it gives error when the company administrator is set -/** - * Portlet implementation class SetCompanyAdministratorsSuperUser - */ -public class SetCompanyAdministratorsSuperUser extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(PromoteCompanyAdministrators.class); - - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.debug(" This is render method of SetCompanyAdministratorsSuperUser"); - - try { - long groupId = PortalUtil.getScopeGroupId(request); - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - long[] companyIds = ParamUtil.getLongValues(httpReq, "companyId"); - if (companyIds.length > 0) { //super user mode - - Team theTeam = TeamLocalServiceUtil.getTeam(companyIds[0]); - request.setAttribute("theTeam", theTeam); - - List availableUsers = Utils.listVREUsersNotAssociatedToAnyCompany(theTeam.getTeamId(), theTeam.getGroupId()); - request.setAttribute("availableUsers", availableUsers); //pass to the JSP - - String imageUrl = Utils.getCompanyLogoURL(theTeam.getName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - request.setAttribute("operationFinished", false); - - //display the view.jsp - super.render(request, response); - } else { - request.setAttribute("operationFinished", true); - super.render(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - - public void promoteAdminUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - long[] userIdsToPromoteAdmins = ParamUtil.getLongValues(actionRequest, "addUserIds"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long companyId = ParamUtil.getLong(actionRequest, "companyId"); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.COMPANY_ADMIN_SITE_ROLE, currentGroupId); - for (int i = 0; i < userIdsToPromoteAdmins.length; i++) { - rm.assignRoleToUser(userIdsToPromoteAdmins[i], currentGroupId, adminRole.getRoleId()); - _log.info("Associating Admin role to user with id " + userIdsToPromoteAdmins[i] + " done"); - rm.assignTeamToUser(userIdsToPromoteAdmins[i], companyId); //add the Admin to the Company - } - - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } -// /** -// * -// * @param actionRequest -// * @param actionResponse -// * @throws Exception -// */ -// public void associateCompanyUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { -// try { -// long[] userIdsToPromoteAdmins = ParamUtil.getLongValues(actionRequest, "addUserIds"); -// System.out.println("userIdsToPromoteAdmins length=" + userIdsToPromoteAdmins.length); -// String[] usernamesToAssociateToCompany = new String[userIdsToPromoteAdmins.length]; -// _log.debug("converting userIds in usernames"); -// for (int i = 0; i < userIdsToPromoteAdmins.length; i++) { -// usernamesToAssociateToCompany[i] = UserLocalServiceUtil.getUser(userIdsToPromoteAdmins[i]).getScreenName(); -// } -// long companyId = ParamUtil.getLong(actionRequest, "companyId"); -// String currentUsername = ParamUtil.getString(actionRequest, "currentUsername"); -// long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); -// String context = Utils.getCurrentContext(currentGroupId); -// _log.info("Super User: " + currentUsername + " has requested the association of some user(s) to the company having id="+companyId + " in context="+context); -// LiferayRoleManager rm = new LiferayRoleManager(); -// LiferayUserManager um = new LiferayUserManager(); -// long firstUserId = um.getUserByUsername(usernamesToAssociateToCompany[0]).getUserId(); -// rm.setUserTeams(firstUserId, new long[]{companyId}); //add the admin to the company -// if (usernamesToAssociateToCompany.length > 1) { //more than one admin was selected -// String[] remainingUsersToShare = new String[usernamesToAssociateToCompany.length-1]; -// for (int i = 1; i < usernamesToAssociateToCompany.length; i++) { -// remainingUsersToShare[i-1] = usernamesToAssociateToCompany[i]; -// } -// -// } -// } -// catch (Exception e) { -// SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); -// actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); -// e.printStackTrace(); -// } -// -// } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/SetFarmAdministrators.java b/src/main/java/org/gcube/portlets/user/performfish/SetFarmAdministrators.java deleted file mode 100644 index 01c67cd..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/SetFarmAdministrators.java +++ /dev/null @@ -1,90 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.IOException; -import java.util.List; - -import javax.portlet.ActionRequest; -import javax.portlet.ActionResponse; -import javax.portlet.PortletException; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.servlet.SessionErrors; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.model.Team; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.service.UserLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class SetFarmAdministrators - */ -public class SetFarmAdministrators extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(SetFarmAdministrators.class); - - @Override - public void render(RenderRequest request, RenderResponse response) - throws PortletException, IOException { - _log.debug(" This is render method of SetFarmAdministrators"); - try { - long groupId = PortalUtil.getScopeGroupId(request); - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - long[] companyIds = ParamUtil.getLongValues(httpReq, "companyId"); - long[] farmIds = ParamUtil.getLongValues(httpReq, "farmId"); - if (companyIds.length > 0 && farmIds.length > 0) { //super user mode - - Team theCompany = TeamLocalServiceUtil.getTeam(companyIds[0]); - Team theFarm = TeamLocalServiceUtil.getTeam(farmIds[0]); - request.setAttribute("theCompany", theCompany); - request.setAttribute("theFarm", theFarm); - List availableUsers = Utils.getAvailableFarmMembersToAssociate(theFarm.getTeamId(), theCompany.getTeamId(), theCompany.getGroupId()); - request.setAttribute("availableUsers", availableUsers); //pass to the JSP - - String imageUrl = Utils.getCompanyLogoURL(theCompany.getName(), groupId, request); - request.setAttribute("companyLogoURL", imageUrl); //pass to logo URL to the JSP - request.setAttribute("operationFinished", false); - - //display the view.jsp - super.render(request, response); - } else { - request.setAttribute("operationFinished", true); - super.render(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - } - } - - public void promoteAdminUsers(ActionRequest actionRequest,ActionResponse actionResponse) throws Exception { - try { - long[] userIdsToPromoteAdmins = ParamUtil.getLongValues(actionRequest, "addUserIds"); - long currentGroupId = ParamUtil.getLong(actionRequest, "currentGroupId"); - long farmId = ParamUtil.getLong(actionRequest, "farmId"); - Team theFarm = TeamLocalServiceUtil.getTeam(farmId); - LiferayRoleManager rm = new LiferayRoleManager(); - GCubeRole adminRole = new LiferayRoleManager().getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, currentGroupId); - for (int i = 0; i < userIdsToPromoteAdmins.length; i++) { - rm.assignRoleToUser(userIdsToPromoteAdmins[i], currentGroupId, adminRole.getRoleId()); - _log.info("Associating Farm Admin role to user with id " + userIdsToPromoteAdmins[i] + " done"); - rm.assignTeamToUser(userIdsToPromoteAdmins[i], theFarm.getTeamId()); //add the Admin to the farm - _log.info("Associating user with id " + userIdsToPromoteAdmins[i] + " to Farm done"); - } - - } - catch (Exception e) { - SessionErrors.add(actionRequest.getPortletSession(),"operation-error"); - actionResponse.setRenderParameter("mvcPath", "/html/error_pages/operation-error.jsp"); - e.printStackTrace(); - } - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/SubmittedFormValidation.java b/src/main/java/org/gcube/portlets/user/performfish/SubmittedFormValidation.java deleted file mode 100644 index 79ec6a8..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/SubmittedFormValidation.java +++ /dev/null @@ -1,334 +0,0 @@ -package org.gcube.portlets.user.performfish; - -import java.io.BufferedReader; -import java.io.IOException; -import java.io.InputStream; -import java.io.InputStreamReader; -import java.io.StringReader; -import java.net.URL; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.Date; -import java.util.List; - -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.ResourceRequest; -import javax.portlet.ResourceResponse; -import javax.servlet.http.HttpServletRequest; -import javax.xml.parsers.DocumentBuilder; -import javax.xml.parsers.DocumentBuilderFactory; - -import org.apache.http.HttpResponse; -import org.apache.http.client.methods.HttpGet; -import org.apache.http.impl.client.CloseableHttpClient; -import org.apache.http.impl.client.HttpClients; -import org.gcube.common.homelibrary.home.workspace.Workspace; -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceItem; -import org.gcube.common.homelibrary.home.workspace.folder.items.ExternalFile; -import org.gcube.common.resources.gcore.ServiceEndpoint; -import org.gcube.common.resources.gcore.utils.XPathHelper; -import org.gcube.portlets.user.performfish.util.Utils; -import org.gcube.portlets.user.performfish.util.ValidationResult; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.w3c.dom.Node; -import org.xml.sax.InputSource; - -import com.liferay.portal.kernel.json.JSONFactoryUtil; -import com.liferay.portal.kernel.json.JSONObject; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.util.ParamUtil; -import com.liferay.portal.service.TeamLocalServiceUtil; -import com.liferay.portal.util.PortalUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; - -/** - * Portlet implementation class SubmittedFormValidation - */ -public class SubmittedFormValidation extends MVCPortlet { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(SubmittedFormValidation.class); - - private final static String XSLX_MIME = "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"; - - private static final int RETRY_NO = 3; - private static String XML_RESULT_ROOT_EXCEPTION = "ExceptionReport"; - private static final String USER_AGENT = "Mozilla/5.0"; - - public static final String VALIDATOR_METHOD_ID = "org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.PERFORMFISH_DATA_VALIDATOR_V2"; - - public void render(RenderRequest request, RenderResponse response) { - GCubeTeam theCompany; - try { - HttpServletRequest httpReq = PortalUtil.getOriginalServletRequest(PortalUtil.getHttpServletRequest(request)); - String[] farmIds = ParamUtil.getParameterValues(httpReq, Utils.ENCODED_FARM_PARAM); - - GCubeTeam theFarm = null; - theCompany = Utils.checkBelongingToOneCompanyOnly(request, response, this); - if (farmIds == null || farmIds.length == 0) { - System.out.println("farmIds == null || farmIds.length == 0"); - if (Utils.getUserFarmsNumber(request, response, this) < 2) { - theFarm = Utils.checkBelongingToOneFarmOnly(request, response, this); - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - } - else { //the farmId is passed via param on the query string - long selectedFarmId = Utils.unmaskId(farmIds[0]); - theFarm = new LiferayRoleManager().getTeam(selectedFarmId); - if (Utils.checkBelongsToTeam(PortalUtil.getUserId(request), theFarm.getTeamId(), PortalUtil.getScopeGroupId(request)) ) {//check that the user belong ot the farm - request.setAttribute("theFarm", theFarm); //pass to the JSP - } - else { - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - } - } - if (theFarm != null) { - request.setAttribute("theCompany", TeamLocalServiceUtil.getTeam(theCompany.getTeamId())); - request.setAttribute("theFarm", theFarm); - super.render(request, response); - } else { - _log.warn("theFarm is null"); - super.render(request, response); - } - } catch (Exception e) { - e.printStackTrace(); - PortletRequestDispatcher dispatcher = getPortletContext().getRequestDispatcher(Utils.NOT_BELONGING_ANY_FARM_PAGE_PATH); - try { - dispatcher.include(request, response); - } catch (PortletException | IOException e1) { - e1.printStackTrace(); - } - } - } - - - public void serveResource(ResourceRequest resourceRequest, ResourceResponse resourceResponse) throws IOException, PortletException { - long companyId = ParamUtil.getLong(resourceRequest, "companyId"); - long farmId = ParamUtil.getLong(resourceRequest, "farmId"); - long userId = ParamUtil.getLong(resourceRequest, "userId"); - long groupId = ParamUtil.getLong(resourceRequest, "groupId"); - String encodedURI = ParamUtil.getString(resourceRequest, "encodedURI", null); - String fileName = ParamUtil.getString(resourceRequest, "fileName", null); - String username = Utils.getCurrentUser(userId).getUsername(); - String phase = ParamUtil.getString(resourceRequest, "phase", null); - _log.debug("companyId: " + companyId); - _log.debug("farmId: " + farmId); - _log.debug("userId: " + userId); - _log.debug("groupId: " + groupId); - _log.debug("encodedURI: " + encodedURI); - _log.debug("phase: " + phase); - _log.debug("fileName: " + fileName); - - - String inputFileLink = encodedURI; - String template = Utils.getBatchTypeName(phase, fileName); - String context = Utils.getCurrentContext(groupId); - String token = Utils.getCurrentUserToken(context, username); - - _log.debug("context: " + context); - _log.debug("token: " + token); - _log.debug("template: " + template); - - ValidationResult result = doWPSCallToDataMiner(inputFileLink, context, token, template); - _log.debug("RESULT:\n"+result); - - if (result.isSuccess()) { - try { - String decodedURL = new java.net.URI(inputFileLink).getPath(); - uploadToCompanyRepository(username, context, companyId, farmId, fileName, new URL(decodedURL).openConnection().getInputStream()); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - java.sql.Date lastActivity = new java.sql.Date(new Date().getTime()); - DBUtil.updateFarmLastSubmissionActivity(conn, farmId, lastActivity); - } catch (Exception e) { - result.setComment("The file is valid but we could not upload it in the company repository, please report this issue at support.d4science.org"); - e.printStackTrace(); - } - } - JSONObject fileObject = JSONFactoryUtil.createJSONObject(); - fileObject.put("success", result.isSuccess()); - fileObject.put("comment", result.getComment()); - resourceResponse.getWriter().println(fileObject); - } - - private String uploadToCompanyRepository(String username, String context, long companyId, long farmId, String fileName, InputStream fileData) throws Exception { - GCubeTeam theCompany = new LiferayRoleManager().getTeam(companyId); - GCubeTeam theFarm = new LiferayRoleManager().getTeam(farmId); - Workspace ws = Utils.getWS(username, context); - WorkspaceFolder companyRepoFolder = Utils.getWSFarmFolder(username, context, theCompany, theFarm); - WorkspaceItem overwriteItem = ws.find(fileName, companyRepoFolder.getId()); - - String toReturn = ""; - if (overwriteItem == null) { - ExternalFile item = companyRepoFolder.createExternalFileItem(fileName, "User form submission on " + new Date(), XSLX_MIME, fileData); - toReturn = item.getId(); - } - else { - ws.updateItem(overwriteItem.getId(), fileData); - toReturn = overwriteItem.getId(); - _log.debug("updateItem with id: "+overwriteItem.getId()+ ", is completed"); - } - _log.info("Uploaded " + fileName + " - Returned Workspace id=" +toReturn); - - return toReturn; - } - - /** - * performs tha actual call to the service - * @param peer session - * @param entry authEntry - * @param token token - * @param username username - * @param inputText - * @param options - * @return - */ - private ValidationResult doWPSCallToDataMiner(String inputFileLink, String context, String token, String template) { - _log.info("doWPSCallToDataMiner"); - ValidationResult toReturn = null; - List dms = null; - try { - dms = Utils.getDataMinerInstance(context); - if (dms == null || dms.isEmpty()) { - return new ValidationResult(false, "Error, no DataMiner cluster in this VRE, please report this issue at www.d4science.org/contact-us"); - } - ServiceEndpoint se = dms.get(0); - ServiceEndpoint.AccessPoint ap = se.profile().accessPoints().asCollection().iterator().next(); - _log.info("got DataMiner instance="+ap.address()); - - String apAddress = ap.address(); - _log.info("inputFileLink at: " + inputFileLink); - String wpsParams = getWPSCallURLParameters(token, inputFileLink, template); - String responseXML = sendGet(apAddress, wpsParams, token); - String resultFileURL = parseResult(responseXML); - _log.info("PARSED OK resultFileURL: " + resultFileURL); - - InputStream is = new URL(resultFileURL).openConnection().getInputStream(); - BufferedReader reader = new BufferedReader(new InputStreamReader(is)); - String line; - List resultLines = new ArrayList<>(); - while ((line = reader.readLine()) != null) { - if (line.split("=").length > 1) - resultLines.add(line.split("=")[1]); //if the split fails it means there is no comment - else - resultLines.add("Validation is successful"); - } - reader.close(); - for (int i = 0; i < resultLines.size(); i++) { - _log.debug("Line " + i + ": " + resultLines.get(i)); - } - toReturn = new ValidationResult(resultLines.get(0).equalsIgnoreCase("OK"), resultLines.get(1)); - } catch (Exception e) { - e.printStackTrace(); - return new ValidationResult(false, "There was a problem contacting the DataMiner cluster in this VRE (" - + context+ ")" - + "), please report this issue at http://support.d4science.org"); - } - return toReturn; - } - - - - private String parseResult(String xml) throws Exception { - String elem = removeXmlStringNamespaceAndPreamble(xml); - DocumentBuilder docBuilder = DocumentBuilderFactory.newInstance().newDocumentBuilder(); - Node node = docBuilder.parse(new InputSource(new StringReader(elem))).getDocumentElement(); - String rootElement = node.getNodeName(); - XPathHelper helper = new XPathHelper(node); - List currValue = null; - if (rootElement.compareTo(XML_RESULT_ROOT_EXCEPTION) == 0) { - currValue = helper.evaluate("/ExceptionReport"); - if (currValue != null && currValue.size() > 0) - return currValue.get(0); - } - else { - currValue = helper.evaluate("//ProcessOutputs/Output/Data/ComplexData/FeatureCollection/featureMember/Result/Data/text()"); - if (currValue != null && currValue.size() > 1) - return currValue.get(1); - } - return null; - } - - //this remove all the namespaces causing parsing errors as i don't have time to deal with this. - private static String removeXmlStringNamespaceAndPreamble(String xmlString) { - return xmlString.replaceAll("(<\\?[^<]*\\?>)?", "") /* remove preamble */ - .replaceAll("xmlns.*?(\"|\').*?(\"|\')", "") /* remove xmlns declaration */ - .replaceAll("(<)(\\w+:)(.*?>)", "$1$3") /* remove opening tag prefix */ - .replaceAll("()", "$1$3") - .replaceAll("wps:", "") - .replaceAll("xsi:", "") - .replaceAll("ogr:",""); /* remove closing tags prefix */ - } - - // HTTP request - private String sendGet(String url, String urlParameters, String token) { - StringBuilder toReturn = new StringBuilder(); - try { - int i = 1; - while (i <= RETRY_NO) { - CloseableHttpClient client = HttpClients.createDefault(); - HttpGet request = new HttpGet(url+"?"+urlParameters); - _log.info("request to="+request.toString()); - // add header - request.setHeader("User-Agent", USER_AGENT); - request.setHeader("Accept-Encoding","UTF-8"); - request.setHeader("Accept-Charset","UTF-8"); - request.setHeader("Content-Encoding","UTF-8"); - - HttpResponse response = client.execute(request); - - // Get the response - BufferedReader rd = new BufferedReader - (new InputStreamReader( - response.getEntity().getContent())); - - String line = ""; - while ((line = rd.readLine()) != null) { - toReturn.append(line); - } - i++; - if (toReturn.toString().compareTo("") == 0 || toReturn.toString().startsWith("Error")) { - _log.warn("response from Dataminer is empty or an error occurred, retry tentative: " + i + " of " + RETRY_NO); - _log.error("here is the faulty response from Dataminer="+toReturn.toString()); - } else { - _log.debug("response from Dataminer="+toReturn.toString()); - break; - } - } - } - catch (Exception e) { - e.printStackTrace(); - } - return toReturn.toString(); - } - /** - * - * @param token the token - * @param inputFileLink the http of the input file - * @param options - * @return the url paramters for WPS Call to perform - */ - private String getWPSCallURLParameters(String token, String inputFileLink, String template) { - StringBuilder sb = new StringBuilder("request=Execute&service=WPS&Version=1.0.0&gcube-token=") - .append(token) - .append("&lang=en-US&Identifier=") - .append(VALIDATOR_METHOD_ID) - .append("&DataInputs=CompanyData=") - .append(inputFileLink) - .append(";Template=") - .append(template) - .append(";") - .append("Overwrite=false;LatestCompanyData=") - .append(inputFileLink) - .append(";"); - return sb.toString(); - } - - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/bean/Association.java b/src/main/java/org/gcube/portlets/user/performfish/bean/Association.java deleted file mode 100644 index 60d412e..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/bean/Association.java +++ /dev/null @@ -1,99 +0,0 @@ -package org.gcube.portlets.user.performfish.bean; - -import java.util.Date; - -public class Association { - - private long associationId; - private String shortName; - private String fullName; - private String imageUrl; - private Date dateCreated; - private String createdBy; - - public Association(long associationId, String createdBy) { - super(); - this.associationId = associationId; - this.createdBy = createdBy; - } - - public Association() { - super(); - } - - - public String getShortName() { - return shortName; - } - - public void setShortName(String shortName) { - this.shortName = shortName; - } - - public String getFullName() { - return fullName; - } - - public void setFullName(String fullName) { - this.fullName = fullName; - } - - public String getImageUrl() { - return imageUrl; - } - - public void setImageUrl(String imageUrl) { - this.imageUrl = imageUrl; - } - - public Date getDateCreated() { - return dateCreated; - } - - public void setDateCreated(Date dateCreated) { - this.dateCreated = dateCreated; - } - - - - public String getCreatedBy() { - return createdBy; - } - - public void setCreatedBy(String createdBy) { - this.createdBy = createdBy; - } - - public long getAssociationId() { - return associationId; - } - - public void setAssociationId(long associationId) { - this.associationId = associationId; - } - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("Association [associationId="); - builder.append(associationId); - builder.append(", shortName="); - builder.append(shortName); - builder.append(", fullName="); - builder.append(fullName); - builder.append(", imageUrl="); - builder.append(imageUrl); - builder.append(", dateCreated="); - builder.append(dateCreated); - builder.append(", createdBy="); - builder.append(createdBy); - builder.append("]"); - return builder.toString(); - } - - - - - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/bean/Company.java b/src/main/java/org/gcube/portlets/user/performfish/bean/Company.java deleted file mode 100644 index ae86963..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/bean/Company.java +++ /dev/null @@ -1,77 +0,0 @@ -package org.gcube.portlets.user.performfish.bean; - -public class Company { - - private long companyId; - private String name; - private long associatationId; - private String imageUrl; - private boolean staged; - - public Company(long companyId, long associatationId, boolean staged) { - super(); - this.companyId = companyId; - this.associatationId = associatationId; - this.staged = staged; - } - - public String getImageUrl() { - return imageUrl; - } - - public void setImageUrl(String imageUrl) { - this.imageUrl = imageUrl; - } - - public long getCompanyId() { - return companyId; - } - - public void setCompanyId(long companyId) { - this.companyId = companyId; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public long getAssociatationId() { - return associatationId; - } - - public void setAssociatationId(long associatationId) { - this.associatationId = associatationId; - } - - public boolean isStaged() { - return staged; - } - - public void setStaged(boolean staged) { - this.staged = staged; - } - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("Company [companyId="); - builder.append(companyId); - builder.append(", name="); - builder.append(name); - builder.append(", associatationId="); - builder.append(associatationId); - builder.append(", imageUrl="); - builder.append(imageUrl); - builder.append(", staged="); - builder.append(staged); - builder.append("]"); - return builder.toString(); - } - - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/bean/CompanyMember.java b/src/main/java/org/gcube/portlets/user/performfish/bean/CompanyMember.java deleted file mode 100644 index 00c34ce..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/bean/CompanyMember.java +++ /dev/null @@ -1,90 +0,0 @@ -package org.gcube.portlets.user.performfish.bean; - -import java.util.ArrayList; -import java.util.List; - -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -public class CompanyMember { - private GCubeUser user; - private List associatedFarms = new ArrayList<>(); - private boolean isAdmin; - public CompanyMember(GCubeUser user) { - super(); - this.user = user; - } - - public boolean isAdmin() { - return isAdmin; - } - - public void setAdmin(boolean isAdmin) { - this.isAdmin = isAdmin; - } - - public GCubeUser getUser() { - return user; - } - public void setUser(GCubeUser user) { - this.user = user; - } - - - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("CompanyMember [user="); - builder.append(user); - builder.append(", associatedFarms="); - builder.append(associatedFarms); - builder.append(", isAdmin="); - builder.append(isAdmin); - builder.append("]"); - return builder.toString(); - } - - public List getAssociatedFarms() { - return associatedFarms; - } - - public String getAssociatedFarmNames() { - String toReturn = ""; - for (Farm farm : associatedFarms) { - toReturn += " " + farm.getName(); - } - return toReturn; - } - - public void setAssociatedFarms(List associatedFarms) { - this.associatedFarms = associatedFarms; - } - - public String getUserAvatarURL() { - return this.user.getUserAvatarURL(); - } - - public String getjobTitle() { - return this.user.getJobTitle(); - } - - public String getFullname() { - return this.user.getFullname(); - } - public long getUserId() { - return this.user.getUserId(); - } - - public String getUsername() { - return this.user.getUsername(); - } - - public String getEmail() { - return this.user.getEmail(); - } - - public void setEmail(String email) { - this.user.setEmail(email); - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/bean/Farm.java b/src/main/java/org/gcube/portlets/user/performfish/bean/Farm.java deleted file mode 100644 index 303b70e..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/bean/Farm.java +++ /dev/null @@ -1,126 +0,0 @@ -package org.gcube.portlets.user.performfish.bean; - -import java.util.Date; -import java.util.List; - -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -public class Farm { - - private long farmId; - private String name; - private long companyId; - private String creatorFullname; - private String imageUrl; - private String location; - private Date dateCreated; - private Date dateLastActivity; - private List administrators; - - public Farm(long farmId, String location, long companyId, String creatorFullname) { - super(); - this.farmId = farmId; - this.location = location; - this.companyId = companyId; - this.creatorFullname = creatorFullname; - } - - public Date getDateCreated() { - return dateCreated; - } - - public void setDateCreated(Date dateCreated) { - this.dateCreated = dateCreated; - } - - public String getCreatorFullname() { - return creatorFullname; - } - - public void setCreatorFullname(String creatorFullname) { - this.creatorFullname = creatorFullname; - } - - public String getLocation() { - return location; - } - - public void setLocation(String location) { - this.location = location; - } - - public long getFarmId() { - return farmId; - } - - public void setFarmId(long farmId) { - this.farmId = farmId; - } - - public String getName() { - return name; - } - - public void setName(String name) { - this.name = name; - } - - public long getCompanyId() { - return companyId; - } - - public void setCompanyId(long companyId) { - this.companyId = companyId; - } - - public String getImageUrl() { - return imageUrl; - } - - public void setImageUrl(String imageUrl) { - this.imageUrl = imageUrl; - } - - public List getAdministrators() { - return administrators; - } - - public void setAdministrators(List administrators) { - this.administrators = administrators; - } - - public Date getDateLastActivity() { - return dateLastActivity; - } - - public void setDateLastActivity(Date dateLastActivity) { - this.dateLastActivity = dateLastActivity; - } - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("Farm [farmId="); - builder.append(farmId); - builder.append(", name="); - builder.append(name); - builder.append(", companyId="); - builder.append(companyId); - builder.append(", creatorFullname="); - builder.append(creatorFullname); - builder.append(", imageUrl="); - builder.append(imageUrl); - builder.append(", location="); - builder.append(location); - builder.append(", dateCreated="); - builder.append(dateCreated); - builder.append(", dateLastActivity="); - builder.append(dateLastActivity); - builder.append(", administrators="); - builder.append(administrators); - builder.append("]"); - return builder.toString(); - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/bean/PublishAnonymisedJob.java b/src/main/java/org/gcube/portlets/user/performfish/bean/PublishAnonymisedJob.java deleted file mode 100644 index 61a3383..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/bean/PublishAnonymisedJob.java +++ /dev/null @@ -1,89 +0,0 @@ -package org.gcube.portlets.user.performfish.bean; - -import com.liferay.portal.kernel.json.JSONObject; - -public class PublishAnonymisedJob { - //STATUSES ACCEPTED, RUNNING, COMPLETE, FAILED, CANCELLED - public static Long EPOCH_TIME_JOB_NOTFINISHED = 3050596467L; //September 1, 2066, Likely retired or dead by then - - private String jobId; - private String farmId; - private String batch_type; - private String sourceUrl; - private String status; - private String submitterIdentity; - private Long endTimeepochSecond; - - - public PublishAnonymisedJob(JSONObject cData) { - this.jobId=cData.getString("id"); - this.farmId=cData.getString("farmId"); - this.batch_type=cData.getString("batch_type"); - this.sourceUrl=cData.getString("sourceUrl"); - this.status=cData.getString("status"); - this.submitterIdentity=cData.getString("submitterIdentity"); - if (cData.getJSONObject("endTime") != null) //if there is no end time the status is not COMPLETE - this.endTimeepochSecond=cData.getJSONObject("endTime").getLong("epochSecond"); - else - this.endTimeepochSecond = EPOCH_TIME_JOB_NOTFINISHED; - } - - - public String getJobId() { - return jobId; - } - - - public String getFarmId() { - return farmId; - } - - - public String getBatch_type() { - return batch_type; - } - - - public String getSourceUrl() { - return sourceUrl; - } - - - public String getStatus() { - return status; - } - - - public String getSubmitterIdentity() { - return submitterIdentity; - } - - - public Long getEndTimeEpochSecond() { - return endTimeepochSecond; - } - - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("PublishAnonymisedJob [jobId="); - builder.append(jobId); - builder.append(", farmId="); - builder.append(farmId); - builder.append(", batch_type="); - builder.append(batch_type); - builder.append(", sourceUrl="); - builder.append(sourceUrl); - builder.append(", status="); - builder.append(status); - builder.append(", submitterIdentity="); - builder.append(submitterIdentity); - builder.append(", endTime="); - builder.append(endTimeepochSecond); - builder.append("]"); - return builder.toString(); - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/bean/SubmittedForm.java b/src/main/java/org/gcube/portlets/user/performfish/bean/SubmittedForm.java deleted file mode 100644 index 19de396..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/bean/SubmittedForm.java +++ /dev/null @@ -1,98 +0,0 @@ -package org.gcube.portlets.user.performfish.bean; - -import java.io.Serializable; - -import org.gcube.common.homelibrary.home.workspace.folder.items.ExternalFile; -import org.gcube.portlets.user.performfish.util.Utils; - -@SuppressWarnings("serial") -public class SubmittedForm implements Serializable { - public static String NOT_YET_PUBLISHER = "No one"; - private static String UNPUBLISHED_LABEL = "Unpublished"; - private static String SUBMITTER_NONE = null; - - private ExternalFile file; - private String status; - private String submitterIdentity; - private long endTimeinMillis = -1; - - public SubmittedForm() { - this.status = UNPUBLISHED_LABEL; - this.submitterIdentity = SUBMITTER_NONE; - } - - public SubmittedForm(ExternalFile file, String status, String submitterIdentity, long endTimeinMillis) { - super(); - this.file = file; - this.status = status; - this.submitterIdentity = submitterIdentity; - this.endTimeinMillis = endTimeinMillis; - } - - public SubmittedForm(ExternalFile file) { - super(); - this.file = file; - this.status = UNPUBLISHED_LABEL; - this.submitterIdentity = SUBMITTER_NONE; - this.endTimeinMillis = -1; - } - - public String getBatchType() { - String batchType = "unknown"; - try { - batchType = Utils.getBatchTypeName(Utils.getPhaseByFileName(this.file.getName()), this.file.getName()); - } catch (Exception e) { - e.printStackTrace(); - } - return batchType; - } - - public ExternalFile getFormFile() { - return file; - } - - public void setFormFile(ExternalFile file) { - this.file = file; - } - - public String getStatus() { - return status; - } - - public void setStatus(String status) { - this.status = status; - } - - public String getSubmitterIdentity() { - return submitterIdentity; - } - - public void setSubmitterIdentity(String submitterIdentity) { - this.submitterIdentity = submitterIdentity; - } - - public long getEndTimeinMillis() { - return endTimeinMillis; - } - - public void setEndTimeinMillis(long endTimeinMillis) { - this.endTimeinMillis = endTimeinMillis; - } - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("SubmittedForm [file="); - builder.append(file); - builder.append(", status="); - builder.append(status); - builder.append(", submitterIdentity="); - builder.append(submitterIdentity); - builder.append(", endTimeinMillis="); - builder.append(endTimeinMillis); - builder.append("]"); - return builder.toString(); - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/ImportedBatchChecker.java b/src/main/java/org/gcube/portlets/user/performfish/util/ImportedBatchChecker.java deleted file mode 100644 index 27c3d1e..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/ImportedBatchChecker.java +++ /dev/null @@ -1,182 +0,0 @@ -package org.gcube.portlets.user.performfish.util; - -import static org.gcube.resources.discovery.icclient.ICFactory.clientFor; -import static org.gcube.resources.discovery.icclient.ICFactory.queryFor; - -import java.io.BufferedReader; -import java.io.IOException; -import java.io.InputStream; -import java.io.InputStreamReader; -import java.io.StringReader; -import java.net.HttpURLConnection; -import java.net.URL; -import java.security.KeyManagementException; -import java.security.NoSuchAlgorithmException; -import java.security.cert.CertificateException; -import java.util.List; - -import javax.net.ssl.HostnameVerifier; -import javax.net.ssl.HttpsURLConnection; -import javax.net.ssl.SSLContext; -import javax.net.ssl.SSLSession; -import javax.net.ssl.TrustManager; -import javax.net.ssl.X509TrustManager; -import javax.xml.xpath.XPath; -import javax.xml.xpath.XPathExpressionException; -import javax.xml.xpath.XPathFactory; - -import org.apache.commons.io.IOUtils; -import org.gcube.common.authorization.library.provider.SecurityTokenProvider; -import org.gcube.common.resources.gcore.GCoreEndpoint; -import org.gcube.common.resources.gcore.GenericResource; -import org.gcube.resources.discovery.client.api.DiscoveryClient; -import org.gcube.resources.discovery.client.queries.api.SimpleQuery; -import org.json.JSONException; -import org.json.JSONObject; -import org.xml.sax.InputSource; - -import com.liferay.portal.kernel.log.LogFactoryUtil; - -/** - * - * @author F. Sinibaldi CNR-ISTI - * @author M. Assante CNR-ISTI - */ -public class ImportedBatchChecker { - private static com.liferay.portal.kernel.log.Log _log = LogFactoryUtil.getLog(ImportedBatchChecker.class); - - private static String ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_NAME = "perform-service"; - private static String ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_CLASS = "Application"; - private static String CONFIGURATION_RESOURCE_SECONDARY_TYPE="ApplicationConfiguration"; - private static String CONFIGURATION_RESOURCE_NAME="PerformFishConfiguration"; - private static final int N_BATCHES_THRESHOLD_FALLBACK = 4; - - - public static boolean checkAnalysisAvailability(long farmid,String batchType, String context) throws JSONException, IOException, KeyManagementException, NoSuchAlgorithmException, NumberFormatException, XPathExpressionException { - fixUntrustCertificate(); - String servicecall=formServiceCall(batchType,farmid, context); - JSONObject jsonObject=readFromURL(servicecall); - String csvUrl=jsonObject.getString("BatchesTable_internal"); - long csvLines=readCSVLines(csvUrl); - return csvLines-1>getThresholdFromIS(); - } - - - private static int getThresholdFromIS() throws NumberFormatException, XPathExpressionException { - try { - SimpleQuery query = queryFor(GenericResource.class); - query.addCondition("$resource/Profile/SecondaryType/text() eq '"+ CONFIGURATION_RESOURCE_SECONDARY_TYPE+"'"); - query.addCondition("$resource/Profile/Name/text() eq '"+ CONFIGURATION_RESOURCE_NAME+"'"); - DiscoveryClient client = clientFor(GenericResource.class); - String xmlConfiguration=client.submit(query).get(0).profile().bodyAsString(); - - InputSource source = new InputSource(new StringReader(xmlConfiguration)); - XPathFactory xpathFactory = XPathFactory.newInstance(); - XPath xpath = xpathFactory.newXPath(); - - return Integer.parseInt(xpath.evaluate("//config/analysis_threshold/text()", source)); - } - catch (Exception e) { - _log.error("There was an error contacting the IS for reading the Batch threshold, returning fallback value="+N_BATCHES_THRESHOLD_FALLBACK, e); - return N_BATCHES_THRESHOLD_FALLBACK; - } - - } - - private static String formServiceCall(String batchtype, long farmid, String context) { - return new StringBuilder(Utils.getAnalyticalToolkitEndpoint(context)) - .append("/performance") - .append("?") - .append("batch_type=").append(batchtype) - .append("&gcube-token="+SecurityTokenProvider.instance.get()) - .append("&farmid=").append(farmid).toString(); - } - - - private static long readCSVLines(String csvUrl) throws IOException { - URL url= new URL(csvUrl); - HttpURLConnection conn= (HttpURLConnection) url.openConnection(); - conn.setDoOutput( true ); - conn.setInstanceFollowRedirects( true ); - conn.setRequestMethod( "GET" ); - - BufferedReader reader = new BufferedReader(new InputStreamReader(conn.getInputStream())); - int lines = 0; - while (reader.readLine() != null) lines++; - reader.close(); - return lines; - } - - private static JSONObject readFromURL(String request) throws IOException, JSONException { - URL url= new URL(request); - HttpsURLConnection conn= (HttpsURLConnection) url.openConnection(); - conn.setDoOutput( true ); - conn.setInstanceFollowRedirects( false ); - conn.setRequestMethod( "GET" ); - conn.setRequestProperty( "Content-Type", "application/json"); - conn.setRequestProperty( "charset", "utf-8"); - conn.setUseCaches( false ); - - InputStream in = conn.getInputStream(); - String encoding = conn.getContentEncoding(); - encoding = encoding == null ? "UTF-8" : encoding; - String body = IOUtils.toString(in, encoding); - - return new JSONObject(body); - } - - - private static void fixUntrustCertificate() throws KeyManagementException, NoSuchAlgorithmException{ - TrustManager[] trustAllCerts = new TrustManager[]{ - new X509TrustManager() { - public java.security.cert.X509Certificate[] getAcceptedIssuers() { - return null; - } - @Override - public void checkClientTrusted(java.security.cert.X509Certificate[] certs, String authType) - throws CertificateException { - } - - @Override - public void checkServerTrusted(java.security.cert.X509Certificate[] certs, String authType) - throws CertificateException { - } - - } - }; - - SSLContext sc = SSLContext.getInstance("SSL"); - sc.init(null, trustAllCerts, new java.security.SecureRandom()); - HttpsURLConnection.setDefaultSSLSocketFactory(sc.getSocketFactory()); - - HostnameVerifier allHostsValid = new HostnameVerifier() { - public boolean verify(String hostname, SSLSession session) { - return true; - } - }; - - // set the allTrusting verifier - HttpsURLConnection.setDefaultHostnameVerifier(allHostsValid); - } - - - - public static List getAnalyticalToolkitServiceInstance() throws Exception { - SimpleQuery query = queryFor(GCoreEndpoint.class); - query.addCondition("$resource/Profile/ServiceClass/text() eq '"+ ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_CLASS +"'"); - query.addCondition("$resource/Profile/ServiceName/text() eq '"+ ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_NAME +"'"); - DiscoveryClient client = clientFor(GCoreEndpoint.class); - List toReturn = client.submit(query); - return toReturn; - } - - - // public static void main(String[] args) throws JSONException, IOException, KeyManagementException, NoSuchAlgorithmException, NumberFormatException, XPathExpressionException { - // //SecurityTokenProvider.instance.set("****"); - // ScopeProvider.instance.set("/gcube/preprod/preVRE"); - // String batchtype="GROW_OUT_INDIVIDUAL"; - // long farmid=12682549; - // - // System.out.println("IS ANALYSIS AVAILABLE : "+checkAnalysisAvailability(farmid, batchtype)); - // } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/PFISHConstants.java b/src/main/java/org/gcube/portlets/user/performfish/util/PFISHConstants.java deleted file mode 100644 index f814ade..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/PFISHConstants.java +++ /dev/null @@ -1,85 +0,0 @@ -package org.gcube.portlets.user.performfish.util; - -public class PFISHConstants { - /** - * set to true if the private company repo should not appear in the workspace (portlet) of the company users - */ - public static final boolean HIDE_COMPANY_SHARED_FOLDER = true; - /** - * - */ - public static final String SET_COMPANY_ADMINISTRATOR_PORTLETID = "setcompanyadministratorssuperuser_WAR_PerformFISHAppsportlet"; - public static final String SET_FARM_ADMINISTRATOR_PORTLETID = "setfarmadministrators_WAR_PerformFISHAppsportlet"; - public static final String ASSOCIATE_COMPANIES_TO_ASSOC_PORTLETID = "associatecompaniestoassociation_WAR_PerformFISHAppsportlet"; - /** - * The URL (relative) of the Company Dashboard - */ - public static final String COMPANY_DASHBOARD_URL = "company-dashboard"; - /** - * The URL (relative) of the Company Farms Dashboard - */ - public static final String FARMS_DASHBOARD_URL = "farm-dashboard"; - /** - * The URL (relative) of the From submission pages - */ - public static final String HATCHERY_PAGE_LAYOUT_FRIENDLY_URL = "/hatchery"; - public static final String PREGROW_PAGE_LAYOUT_FRIENDLY_URL = "/pre-grow"; - public static final String GROWOUT_PAGE_LAYOUT_FRIENDLY_URL = "/grow-out"; - /** - * This is the role a company Administrator should have to be interpreted as Administrator by this application - */ - public static final String COMPANY_ADMIN_SITE_ROLE = "Infrastructure-Manager"; - /** - * This is the role a company farm Administrator should have to be interpreted as Administrator by this application - */ - public static final String FARM_ADMIN_SITE_ROLE = "Data-Manager"; - /** - * These are the 2 coordinates for the Database containing the logic of the app - */ - public static final String PF_DB_SERVICE_ENDPOINT_NAME = "PF_DB"; - public static final String PF_DB_SERVICE_ENDPOINT_CATEGORY = "Database"; - /** - * used to call the display of a user profile - */ - public static final String USER_PROFILE_OID = "userIdentificationParameter"; - /** - * this is the default role of the authorization service - */ - public final static String DEFAULT_ROLE = "OrganizationMember"; - /** - * The hidden ws folder suffix automatically created by in the workspace for the compani repositories - */ - public static final String COMPANY_WS_FOLDER_SUFFIX = "_PerformFISH_Data"; - /** - * The name of the folder containing the logo of the companies - */ - public static final String LOGO_FOLDER_NAME = "Logo"; - /** - * The attribute name for the portlet preference that indicates which phase is displaying - */ - public static final String PHASE_PREFERENCE_ATTR_NAME = "phase"; - /** - * And these 4 are the possible values for the attribute above (PHASE_PREFERENCE_ATTR_NAME) - */ - public static final String SHOW_ALL_PHASES = "All"; - public static final String SHOW_HATCHERY = "Hatchery"; - public static final String SHOW_PRE_ONGROWING = "Pre"; - public static final String SHOW_GROW_OUT = "Grow"; - /** - * waringin or error pages paths - */ - public static final String OPERATION_ERROR_PATH = "/html/error_pages/operation-error.jsp"; - public static final String FARM_NAME_ALREADY_EXIST_ERROR_PATH = "/html/error_pages/farmname_exists_already.jsp"; - - public static final String TEMPLATE_HATCHERY_INDIVIDUAL = "HATCHERY_INDIVIDUAL"; - public static final String TEMPLATE_HATCHERY_AGGREGATED = "HATCHERY_AGGREGATED"; - public static final String TEMPLATE_HATCHERY_INDIVIDUAL_CLOSED = "HATCHERY_INDIVIDUAL_CLOSED_BATCHES"; - public static final String TEMPLATE_HATCHERY_AGGREGATED_CLOSED = "HATCHERY_AGGREGATED_CLOSED_BATCHES"; - public static final String TEMPLATE_PRE_ONGROWING = "PRE_ONGROWING"; - public static final String TEMPLATE_PRE_ONGROWING_CLOSED = "PRE_ONGROWING_CLOSED_BATCHES"; - public static final String TEMPLATE_GROWOUT_INDIVIDUAL = "GROW_OUT_INDIVIDUAL"; - public static final String TEMPLATE_GROWOUT_AGGREGATED = "GROW_OUT_AGGREGATED"; - public static final String TEMPLATE_GROWOUT_INDIVIDUAL_CLOSED = "GROW_OUT_INDIVIDUAL_CLOSED_BATCHES"; - public static final String TEMPLATE_GROWOUT_AGGREGATED_CLOSED = "GROW_OUT_AGGREGATED_CLOSED_BATCHES"; - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/Utils.java b/src/main/java/org/gcube/portlets/user/performfish/util/Utils.java deleted file mode 100644 index 9f4fd98..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/Utils.java +++ /dev/null @@ -1,1077 +0,0 @@ -package org.gcube.portlets.user.performfish.util; - -import static org.gcube.common.authorization.client.Constants.authorizationService; -import static org.gcube.resources.discovery.icclient.ICFactory.clientFor; -import static org.gcube.resources.discovery.icclient.ICFactory.queryFor; - -import java.io.IOException; -import java.io.UnsupportedEncodingException; -import java.net.URI; -import java.net.URLEncoder; -import java.sql.Connection; -import java.util.ArrayList; -import java.util.Base64; -import java.util.Collection; -import java.util.List; - -import javax.portlet.PortletException; -import javax.portlet.PortletRequestDispatcher; -import javax.portlet.RenderRequest; -import javax.portlet.RenderResponse; -import javax.portlet.ResourceRequest; -import javax.servlet.http.HttpServletRequest; - -import org.gcube.common.authorization.client.exceptions.ObjectNotFound; -import org.gcube.common.authorization.library.provider.SecurityTokenProvider; -import org.gcube.common.authorization.library.provider.UserInfo; -import org.gcube.common.homelibrary.home.HomeLibrary; -import org.gcube.common.homelibrary.home.workspace.Workspace; -import org.gcube.common.homelibrary.home.workspace.WorkspaceFolder; -import org.gcube.common.homelibrary.home.workspace.WorkspaceSharedFolder; -import org.gcube.common.homelibrary.home.workspace.accessmanager.ACLType; -import org.gcube.common.portal.PortalContext; -import org.gcube.common.resources.gcore.GCoreEndpoint; -import org.gcube.common.resources.gcore.ServiceEndpoint; -import org.gcube.common.resources.gcore.GCoreEndpoint.Profile.Endpoint; -import org.gcube.common.scope.api.ScopeProvider; -import org.gcube.portlets.user.performfish.bean.Association; -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.bean.CompanyMember; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.gcube.portlets.user.performfish.util.db.DBUtil; -import org.gcube.portlets.user.performfish.util.db.DatabaseConnection; -import org.gcube.resources.discovery.client.api.DiscoveryClient; -import org.gcube.resources.discovery.client.queries.api.SimpleQuery; -import org.gcube.vomanagement.usermanagement.RoleManager; -import org.gcube.vomanagement.usermanagement.UserManager; -import org.gcube.vomanagement.usermanagement.exception.GroupRetrievalFault; -import org.gcube.vomanagement.usermanagement.exception.RoleRetrievalFault; -import org.gcube.vomanagement.usermanagement.exception.UserRetrievalFault; -import org.gcube.vomanagement.usermanagement.impl.LiferayRoleManager; -import org.gcube.vomanagement.usermanagement.impl.LiferayUserManager; -import org.gcube.vomanagement.usermanagement.model.GCubeRole; -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - -import com.liferay.portal.kernel.exception.PortalException; -import com.liferay.portal.kernel.exception.SystemException; -import com.liferay.portal.kernel.log.Log; -import com.liferay.portal.kernel.log.LogFactoryUtil; -import com.liferay.portal.kernel.repository.model.Folder; -import com.liferay.portal.util.PortalUtil; -import com.liferay.portlet.documentlibrary.model.DLFileEntry; -import com.liferay.portlet.documentlibrary.model.DLFolderConstants; -import com.liferay.portlet.documentlibrary.service.DLAppServiceUtil; -import com.liferay.portlet.documentlibrary.service.DLFileEntryLocalServiceUtil; -import com.liferay.util.bridges.mvc.MVCPortlet; -/** - * - * @author M. Assante CNR-ISTI - */ -public class Utils { - private static Log _log = LogFactoryUtil.getLog(Utils.class); - - private static String SERVICE_ENDPOINT_CATEGORY = "DataAnalysis"; - private static String SERVICE_ENDPOINT_NAME = "DataMiner"; - public static final String ENCODED_FARM_PARAM = "ZmFybUlk"; - public static String ANALYTICAL_TOOLKIT_PORTLET_ENDPOINT = "performfish-analysis"; - private static String ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_NAME = "perform-service"; - private static String ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_CLASS = "Application"; - public static String ANALYTICAL_TOOLKIT_SERVICE_INTERFACE_NAME = "org.gcube.application.perform.service.PerformService"; - - public static final String NOT_ADMIN_PAGE_PATH = "/html/error_pages/NotACompanyAdmin.jsp"; - public static final String NOT_FARM_ADMIN_PAGE_PATH = "/html/error_pages/NotAFarmAdmin.jsp"; - public static final String NOT_BELONGING_PAGE_PATH = "/html/error_pages/NotBelongingToAnyCompany.jsp"; - public static final String NOT_BELONGING_ANY_FARM_PAGE_PATH = "/html/error_pages/NotBelongingToAnyFarm.jsp"; - public static final String NOT_BELONGING_ANY_ASSO_PAGE_PATH = "/html/error_pages/NotBelongingToAnyAssociation.jsp"; - public static final String TOO_MANY_BELONGING_PAGE_PATH = "/html/error_pages/TooManyBelongingCompany.jsp"; - public static final String TOO_MANY_FARM_PAGE_PATH = "/html/error_pages/TooManyBelongingFarm.jsp"; - public static final String TOO_MANY_ASSO_PAGE_PATH = "/html/error_pages/TooManyBelongingAssociation.jsp"; - public static final String SELECT_FARM_PAGE_PATH = "/html/farmrepository/SelectBelongingFarm.jsp"; - - private static UserManager UM = new LiferayUserManager(); - private static RoleManager RM = new LiferayRoleManager(); - - - /** - * For being a Company admin in PerformFISHKPIs VRE you should have the Site Role defined in COMPANY_ADMIN_SITE_ROLE constant. - * The company the user belongs to instead is defined by the Team (VRE Group) to which the user belongs to. A user must belong to one Team only. - * @param currentUser - * @return the GCubeTeam to which the user belongs to, or null oterwise - * @throws GroupRetrievalFault - * @throws UserRetrievalFault - */ - public static GCubeTeam checkBelongingToOneCompanyOnly(RenderRequest request, RenderResponse response, MVCPortlet instance) throws PortletException, IOException { - - GCubeUser currentUser = getCurrentUser(request); - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - } catch (PortalException | SystemException e) { - e.printStackTrace(); - } - _log.debug("user is" + currentUser); - List teams = new ArrayList<>(); - try { - teams = new LiferayRoleManager().listTeamsByUserAndGroup(currentUser.getUserId(), groupId); - } catch (UserRetrievalFault | GroupRetrievalFault e) { - e.printStackTrace(); - } - - if (teams.isEmpty()) { - _log.info("NOT BELONGING TO ANY TEAM"); - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_PAGE_PATH); - dispatcher.include(request, response); - return null; - } - List companiesChecker = new ArrayList<>(); //this at then end must be length 1 - if (teams.size() > 0) { - _log.info("Checking company ..."); - Connection conn; - try { - conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List companies = DBUtil.getCompanies(conn); - for (GCubeTeam team : teams) { - for (Company company : companies) { - if (team.getTeamId() == company.getCompanyId()) { - _log.info(currentUser.getUsername() + " belongs to company ..." + team.getTeamName()); - companiesChecker.add(team); - } - } - } - } catch (Exception e) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher("/html/error_pages/operation-error.jsp"); - dispatcher.include(request, response); - e.printStackTrace(); - } - } - if (companiesChecker.isEmpty()) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else if (companiesChecker.size() > 1) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(TOO_MANY_BELONGING_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else - return companiesChecker.get(0); - } - /** - * - * @param request - * @param response - * @param instance - * @return - * @throws PortletException - * @throws IOException - */ - public static GCubeTeam checkBelongingToOneAssociationOnly(RenderRequest request, RenderResponse response, MVCPortlet instance) throws PortletException, IOException { - - GCubeUser currentUser = getCurrentUser(request); - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - } catch (PortalException | SystemException e) { - e.printStackTrace(); - } - _log.debug("user is" + currentUser); - List teams = new ArrayList<>(); - try { - teams = new LiferayRoleManager().listTeamsByUserAndGroup(currentUser.getUserId(), groupId); - } catch (UserRetrievalFault | GroupRetrievalFault e) { - e.printStackTrace(); - } - - if (teams.isEmpty()) { - _log.info("NOT BELONGING TO ANY TEAM"); - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_PAGE_PATH); - dispatcher.include(request, response); - return null; - } - List associationChecker = new ArrayList<>(); //this at then end must be length 1 - if (teams.size() > 0) { - _log.info("Checking association ..."); - Connection conn; - try { - conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List associations = DBUtil.getAllAssociations(conn); - for (GCubeTeam team : teams) { - for (Association ass : associations) { - if (team.getTeamId() == ass.getAssociationId()) { - _log.info(currentUser.getUsername() + " belongs to association ..." + team.getTeamName()); - associationChecker.add(team); - } - } - } - } catch (Exception e) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher("/html/error_pages/operation-error.jsp"); - dispatcher.include(request, response); - e.printStackTrace(); - } - } - if (associationChecker.isEmpty()) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_ASSO_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else if (associationChecker.size() > 1) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(TOO_MANY_ASSO_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else - return associationChecker.get(0); - - } - - /** - * For being a Company FARM admin in PerformFISHKPIs VRE you should have the Site Role defined in FARM_ADMIN_SITE_ROLE constant. - * The farm the user belongs to instead is defined by the Team (VRE Group) to which the user belongs to. A user must belong to one Farm only. - * @param currentUser - * @return the GCubeTeam to which the user belongs to, or null oterwise - * @throws GroupRetrievalFault - * @throws UserRetrievalFault - */ - public static GCubeTeam checkBelongingToOneFarmOnly(RenderRequest request, RenderResponse response, MVCPortlet instance) throws PortletException, IOException { - - GCubeUser currentUser = getCurrentUser(request); - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - } catch (PortalException | SystemException e) { - e.printStackTrace(); - } - _log.debug("user is" + currentUser); - List teams = new ArrayList<>(); - try { - teams = new LiferayRoleManager().listTeamsByUserAndGroup(currentUser.getUserId(), groupId); - } catch (UserRetrievalFault | GroupRetrievalFault e) { - e.printStackTrace(); - } - - if (teams.isEmpty()) { - _log.info("NOT BELONGING TO ANY TEAM"); - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return null; - } - GCubeTeam theuserCompany = checkBelongingToOneCompanyOnly(request, response, instance); - List farmsChecker = new ArrayList<>(); //this at then end must be length 1 - if (teams.size() > 0) { - _log.info("Checking farms ..."); - Connection conn; - try { - conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List farms = DBUtil.listFarmsByCompanyId(conn, theuserCompany.getTeamId()); - for (GCubeTeam team : teams) { - for (Farm farm : farms) { - if (team.getTeamId() == farm.getFarmId()) { - _log.info(currentUser.getUsername() + " belongs to farm ..." + team.getTeamName()); - farmsChecker.add(team); - } - } - } - } catch (Exception e) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher("/html/error_pages/operation-error.jsp"); - dispatcher.include(request, response); - e.printStackTrace(); - } - } - if (farmsChecker.isEmpty()) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else if (farmsChecker.size() > 1) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(TOO_MANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else - return farmsChecker.get(0); - } - - public static boolean checkBelongsToTeam(long userId, long farmId, long groupid) throws Exception { - List teams = new LiferayRoleManager().listTeamsByUserAndGroup(userId, groupid); - for (GCubeTeam farm : teams) { - if (farm.getTeamId() == farmId) - return true; - } - return false; - } - - - public static List getUserFarms(RenderRequest request, RenderResponse response, MVCPortlet instance) throws PortletException, IOException { - - GCubeUser currentUser = getCurrentUser(request); - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - } catch (PortalException | SystemException e) { - e.printStackTrace(); - } - _log.info("user is" + currentUser); - List teams = new ArrayList<>(); - try { - teams = new LiferayRoleManager().listTeamsByUserAndGroup(currentUser.getUserId(), groupId); - } catch (UserRetrievalFault | GroupRetrievalFault e) { - e.printStackTrace(); - } - - if (teams.isEmpty()) { - _log.info("NOT BELONGING TO ANY TEAM"); - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return null; - } - GCubeTeam theuserCompany = checkBelongingToOneCompanyOnly(request, response, instance); - List farmsChecker = new ArrayList<>(); - if (teams.size() > 0) { - _log.info("Checking farms ..."); - Connection conn; - try { - conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List farms = DBUtil.listFarmsByCompanyId(conn, theuserCompany.getTeamId()); - for (GCubeTeam team : teams) { - for (Farm farm : farms) { - if (team.getTeamId() == farm.getFarmId()) { - _log.info(currentUser.getUsername() + " belongs to farm ..." + team.getTeamName()); - farmsChecker.add(team); - } - } - } - } catch (Exception e) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher("/html/error_pages/operation-error.jsp"); - dispatcher.include(request, response); - e.printStackTrace(); - } - } - if (farmsChecker.isEmpty()) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else if (farmsChecker.size() > 1) { //executed when more than one farm exist per user - request.setAttribute("theFarms", farmsChecker); //pass to the JSP - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(SELECT_FARM_PAGE_PATH); - dispatcher.include(request, response); - return null; - } else - return farmsChecker; - } - - public static int getUserFarmsNumber(RenderRequest request, RenderResponse response, MVCPortlet instance) throws PortletException, IOException { - - GCubeUser currentUser = getCurrentUser(request); - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - } catch (PortalException | SystemException e) { - e.printStackTrace(); - } - _log.debug("user is" + currentUser); - List teams = new ArrayList<>(); - try { - teams = new LiferayRoleManager().listTeamsByUserAndGroup(currentUser.getUserId(), groupId); - } catch (UserRetrievalFault | GroupRetrievalFault e) { - e.printStackTrace(); - } - - if (teams.isEmpty()) { - _log.info("NOT BELONGING TO ANY TEAM"); - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return 0; - } - GCubeTeam theuserCompany = checkBelongingToOneCompanyOnly(request, response, instance); - List farmsChecker = new ArrayList<>(); - if (teams.size() > 0) { - _log.info("Checking farms ..."); - Connection conn; - try { - conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List farms = DBUtil.listFarmsByCompanyId(conn, theuserCompany.getTeamId()); - for (GCubeTeam team : teams) { - for (Farm farm : farms) { - if (team.getTeamId() == farm.getFarmId()) { - _log.info(currentUser.getUsername() + " belongs to farm ..." + team.getTeamName()); - farmsChecker.add(team); - } - } - } - } catch (Exception e) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher("/html/error_pages/operation-error.jsp"); - dispatcher.include(request, response); - e.printStackTrace(); - } - } - if (farmsChecker.isEmpty()) { - PortletRequestDispatcher dispatcher = instance.getPortletContext().getRequestDispatcher(NOT_BELONGING_ANY_FARM_PAGE_PATH); - dispatcher.include(request, response); - return 0; - } else - return farmsChecker.size(); - } - - - /** - * - * @param theTeam - * @param groupId - * @param request - * @return - * @throws PortalException - * @throws SystemException - */ - public static String getCompanyLogoURL(String companyName, long groupId, RenderRequest request) { - String imageUrl = ""; - String fileName = companyName+".png"; - try { - Folder folder = DLAppServiceUtil.getFolder(groupId,DLFolderConstants.DEFAULT_PARENT_FOLDER_ID, PFISHConstants.LOGO_FOLDER_NAME); - DLFileEntry image = DLFileEntryLocalServiceUtil.getFileEntry(groupId, folder.getFolderId(), fileName); - - if (image != null) { - imageUrl = - PortalUtil.getPortalURL(request) + "/documents/" + image.getGroupId() + "/" + - image.getFolderId() + "/" + image.getTitle() + "/" + image.getUuid() + "?t=" + - System.currentTimeMillis(); - } - } catch (Exception e) { - _log.warn("No Logo URL found for this Comany in the Site Logo folder, file expected to find: " + fileName); - } - return imageUrl; - } - /** - * - * @param team - * @return - * @throws GroupRetrievalFault - * @throws RoleRetrievalFault - */ - public static List getCompanyAdminTeamMembers(long teamId, long groupId) throws Exception { - List toReturn = new ArrayList<>(); - GCubeRole adminRole = RM.getRole(PFISHConstants.COMPANY_ADMIN_SITE_ROLE, groupId); - List companyUsers = UM.listUsersByTeam(teamId); - for (GCubeUser member : companyUsers) { - if (RM.hasRole(member.getUserId(), groupId, adminRole.getRoleId())) { - toReturn.add(new CompanyMember(member)); - } - } - return toReturn; - } - /** - * - * @param team - * @return - * @throws GroupRetrievalFault - * @throws RoleRetrievalFault - */ - public static List getFarmAdminTeamMembers(GCubeTeam theCompany, GCubeTeam theFarm) throws Exception { - long teamId = theFarm.getTeamId(); - List toReturn = new ArrayList<>(); - List farmUsers = UM.listUsersByTeam(teamId); - for (GCubeUser member : farmUsers) { - if (isFarmAdmin(member, theFarm.getGroupId(), theFarm)) - toReturn.add(member); - } - return toReturn; - } - /** - * - * @param team - * @return - * @throws GroupRetrievalFault - * @throws RoleRetrievalFault - */ - public static List getRegularCompanyMembers(long teamId, long groupId) throws Exception { - List toReturn = new ArrayList<>(); - - GCubeRole adminRole = RM.getRole(PFISHConstants.COMPANY_ADMIN_SITE_ROLE, groupId); - List companyUsers = UM.listUsersByTeam(teamId); - for (GCubeUser member : companyUsers) { - if (!RM.hasRole(member.getUserId(), groupId, adminRole.getRoleId())) { - toReturn.add(new CompanyMember(member)); - } - } - return toReturn; - } - /** - * - * @param team - * @return - * @throws GroupRetrievalFault - * @throws RoleRetrievalFault - */ - public static List getRegularFarmMembers(long farmId, long groupId) throws Exception { - List toReturn = new ArrayList<>(); - - //check that the user belongs to the company first - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - long companyId = DBUtil.getCompanyByFarmId(conn, farmId); - List companyMembers = UM.listUsersByTeam(companyId); - - GCubeRole adminRole = RM.getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, groupId); - List farmUsers = UM.listUsersByTeam(farmId); - for (GCubeUser member : farmUsers) { - if (!RM.hasRole(member.getUserId(), groupId, adminRole.getRoleId()) && companyMembers.contains(member)) { - toReturn.add(member); - } - } - return toReturn; - } - /** - * - * @param teamId - * @param groupId - * @return the list of the company users eligible to become a farm members, eligible means they belong the company but not to this farm - * @throws Exception - */ - public static List getAvailableFarmMembersToAssociate(long farmId, long companyId, long groupId) throws Exception { - List toReturn = new ArrayList(); - List companyUsers = UM.listUsersByTeam(companyId); - List farmUsers = UM.listUsersByTeam(farmId); - for (GCubeUser user : companyUsers) { - boolean found = false; - if (farmUsers.contains(user)) { - found = true; - } - if (!found) - toReturn.add(user); - } - return toReturn; - } - /** - * - * @param team - * @return - * @throws GroupRetrievalFault - * @throws RoleRetrievalFault - */ - public static List listVREUsersNotAssociatedToAnyCompany(long teamId, long groupId) throws Exception { - List toReturn = new ArrayList<>(); - List vreUsers = UM.listUsersByGroup(groupId); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List allCompanies = DBUtil.getCompanies(conn); - for (GCubeUser vreUser : vreUsers) { - boolean found = false; - for (Company company : allCompanies) { - List companyUsers = UM.listUsersByTeam(company.getCompanyId()); - if (companyUsers.contains(vreUser)) { - found = true; - break; - } - } - if (!found) - toReturn.add(vreUser); - } - return toReturn; - } - /** - * - * @param companyId - * @param groupId - * @return list of Company Users Not Associated To Any Farm of the company - * @throws Exception - */ - public static List listCompanyUsersNotAssociatedToAnyFarm(long companyId, long groupId) throws Exception { - List toReturn = new ArrayList<>(); - List companyUsers = UM.listUsersByTeam(companyId); - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List allFarms = DBUtil.listFarmsByCompanyId(conn, companyId); - for (GCubeUser companyUser : companyUsers) { - boolean found = false; - for (Farm farm : allFarms) { - List farmUsers = UM.listUsersByTeam(farm.getFarmId()); - if (farmUsers.contains(companyUser)) { - found = true; - break; - } - } - if (!found) - toReturn.add(companyUser); - } - return toReturn; - } - /** - * - * @param teamToExclude - * @return the list of the user of the current Site withour the members of the team passes as paremeter - */ - public static List getAvailableSiteMembersToAssociate(long teamId, long groupId) throws Exception { - List toReturn = new ArrayList(); - List companyUsers = UM.listUsersByTeam(teamId); - List siteUsers = UM.listUsersByGroup(groupId, false); - for (GCubeUser siteUser : siteUsers) { - if (!companyUsers.contains(siteUser)) - toReturn.add(siteUser); - } - return toReturn; - } - - public static String getUserProfileLink(String username) { - return "profile?"+ new String(Base64.getEncoder().encode(PFISHConstants.USER_PROFILE_OID.getBytes()))+"="+new String(Base64.getEncoder().encode(username.getBytes())); - } - /** - * - * @param currentUser - * @param groupId the site id - * @param team the Team to which the user belongs to - * @return - * @throws Exception - */ - public static boolean isCompanyAdmin(GCubeUser currentUser, long groupId, GCubeTeam team) throws Exception { - // instanciate the interface - - long teamId = team.getTeamId(); - List companyUsers = UM.listUsersByTeam(teamId); - //the team must be defined in the current group and the user must be part of the team - if (team.getGroupId() == groupId && companyUsers.contains(currentUser)) { - _log.info(currentUser.getUsername() + " belongs to " + team.getTeamName() + " checking Admin rights ..."); - GCubeRole adminRole = RM.getRole(PFISHConstants.COMPANY_ADMIN_SITE_ROLE, groupId); - boolean isAdmin = RM.hasRole(currentUser.getUserId(), groupId, adminRole.getRoleId()); - _log.info(currentUser.getUsername() + " is Admin of Company " + team.getTeamName() + "? " + isAdmin); - return isAdmin; - } - return false; - } - - /** - * - * @param userId - * @param companyId - * @param groupId - * @return the farm instance or null if any - * @throws Exception - */ - public static List getFarmsByUserId(long userId, long companyId, long groupId) throws Exception { - _log.debug("user is" + userId); - List teams = new ArrayList<>(); - List toReturn = new ArrayList<>(); - try { - teams = new LiferayRoleManager().listTeamsByUserAndGroup(userId, groupId); - } catch (UserRetrievalFault | GroupRetrievalFault e) { - e.printStackTrace(); - } - Connection conn = DatabaseConnection.getInstance(Utils.getCurrentContext(groupId)).getConnection(); - List allFarms = DBUtil.listFarmsByCompanyId(conn, companyId); - for (Farm farm : allFarms) { - for (GCubeTeam team : teams) { - if (farm.getFarmId() == team.getTeamId()) { - farm.setName(team.getTeamName()); - toReturn.add(farm); - } - } - } - return toReturn; - } - - /** - * - * @param theUser - * @param groupId the site id - * @param theFarm the Team to which the user belongs to - * @return - * @throws Exception - */ - public static boolean isFarmAdmin(GCubeUser theUser, long groupId, GCubeTeam theFarm) throws Exception { - // instanciate the interface - - long teamId = theFarm.getTeamId(); - List farmUsers = UM.listUsersByTeam(teamId); - //the team must be defined in the current group and the user must be part of the team - if (theFarm.getGroupId() == groupId && farmUsers.contains(theUser)) { - _log.info(theUser.getUsername() + " belongs to " + theFarm.getTeamName() + " checking Admin rights ..."); - GCubeRole adminRole = RM.getRole(PFISHConstants.FARM_ADMIN_SITE_ROLE, groupId); - boolean isAdmin = RM.hasRole(theUser.getUserId(), groupId, adminRole.getRoleId()); - _log.info(theUser.getUsername() + " is Admin of FARM " + theFarm.getTeamName() + "? " + isAdmin); - return isAdmin; - } - return false; - } - - public static Workspace getWS(String currentUsername, String context) { - String username = currentUsername; - String authorizationToken = PortalContext.getConfiguration().getCurrentUserToken(context, username); - SecurityTokenProvider.instance.set(authorizationToken); - ScopeProvider.instance.set(context); - try { - return HomeLibrary.getUserWorkspace(username); - } - catch (Exception e) { - e.printStackTrace(); - return null; - } - } - /** - * check whether the company folder exists and it creates it when not. - * @param currentUsername - * @param context - * @return - */ - public static synchronized WorkspaceFolder getWSCompanyFolder(String currentUsername, String context, GCubeTeam team) { - String username = currentUsername; - String authorizationToken = PortalContext.getConfiguration().getCurrentUserToken(context, username); - SecurityTokenProvider.instance.set(authorizationToken); - ScopeProvider.instance.set(context); - Workspace ws = null; - WorkspaceFolder folder = null; - String companyName = team.getTeamName(); - try { - ws = HomeLibrary.getUserWorkspace(username); - String destinationFolderId = ws.getRoot().getId(); - String name = companyName+PFISHConstants.COMPANY_WS_FOLDER_SUFFIX; - String description = "Data belonging to " + companyName; - - if (!ws.exists(name, destinationFolderId)) { - _log.info(companyName + " company folder does not exists, triggering creation ... "); - folder = ws.createFolder(name, description, destinationFolderId); - folder.setHidden(PFISHConstants.HIDE_COMPANY_SHARED_FOLDER); - _log.info("Company folder created succesfully for " + companyName + " adding other company users (if any)"); - List users = new ArrayList<>(); - for (GCubeUser member : UM.listUsersByTeam(team.getTeamId())) { - users.add(member.getUsername()); - } - WorkspaceSharedFolder sharedFolder = folder.share(users); - try { - Thread.sleep(5000); - } catch (InterruptedException ex) {} - if (sharedFolder.isShared()) { - sharedFolder.setACL(users, ACLType.WRITE_ALL); - _log.info("ACL Set correctly ..."); - } else { - while (!sharedFolder.isShared()) { - _log.info("Trying to Set ACL ..."); - try { - Thread.sleep(5000); - } catch (InterruptedException ex) {} - if (sharedFolder.isShared()) { - sharedFolder.setACL(users, ACLType.WRITE_ALL); - _log.info("ACL Set correctly after at least one attempt..."); - } - } - } - } - else { - _log.info(companyName + " company folder exists, returning id ... "); - folder = (WorkspaceFolder) ws.find(name, destinationFolderId); - folder.setHidden(PFISHConstants.HIDE_COMPANY_SHARED_FOLDER); - } - } - catch (Exception e) { - e.printStackTrace(); - return null; - } - return folder; - } - - /** - * check whether the farm folder exists and it creates it when not. - * @param currentUsername - * @param context - * @return - */ - public static synchronized WorkspaceFolder getWSFarmFolder(String currentUsername, String context, GCubeTeam company, GCubeTeam farm) { - String username = currentUsername; - String authorizationToken = PortalContext.getConfiguration().getCurrentUserToken(context, username); - SecurityTokenProvider.instance.set(authorizationToken); - ScopeProvider.instance.set(context); - - Workspace ws = null; - WorkspaceFolder folder = null; - String companyName = company.getTeamName(); - try { - WorkspaceFolder companyFolder = getWSCompanyFolder(currentUsername, context, company); - ws = HomeLibrary.getUserWorkspace(username); - String destinationFolderId = companyFolder.getId(); - String name = Long.toString(farm.getTeamId()); //the farm folder is the unique id of the farm - String description = new StringBuilder("Forms submitted by farm ") - .append(farm.getTeamName()) - .append(" belonging to company ").append(companyName).toString(); - if (!ws.exists(name, destinationFolderId)) { - _log.info(companyName + " farm folder does not exists, triggering creation ... "); - folder = ws.createFolder(name, description, destinationFolderId); - folder.setHidden(PFISHConstants.HIDE_COMPANY_SHARED_FOLDER); - _log.info("Farm folder created succesfully for " + companyName); - } - else { - _log.info(farm.getTeamName() + " farm folder exists, returning id ... "); - SecurityTokenProvider.instance.set(authorizationToken); - ScopeProvider.instance.set(context); - folder = (WorkspaceFolder) ws.find(name, destinationFolderId); - folder.setHidden(PFISHConstants.HIDE_COMPANY_SHARED_FOLDER); - _log.info(farm.getTeamName() + " farm folder id = " + folder.getId()); - } - } - catch (Exception e) { - e.printStackTrace(); - return null; - } - return folder; - } - - public static GCubeUser getCurrentUser(RenderRequest request) { - long userId; - try { - userId = PortalUtil.getUser(request).getUserId(); - return getCurrentUser(userId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static GCubeUser getCurrentUser(HttpServletRequest request) { - long userId; - try { - userId = PortalUtil.getUser(request).getUserId(); - return getCurrentUser(userId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static GCubeUser getCurrentUser(ResourceRequest request) { - long userId; - try { - userId = PortalUtil.getUser(request).getUserId(); - return getCurrentUser(userId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - - public static GCubeUser getUserByUsername(String username) { - try { - return new LiferayUserManager().getUserByUsername(username); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static GCubeUser getCurrentUser(long userId) { - try { - return new LiferayUserManager().getUserById(userId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static String getCurrentContext(ResourceRequest request) { - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - return getCurrentContext(groupId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static String getCurrentContext(RenderRequest request) { - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - return getCurrentContext(groupId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static String getCurrentContext(HttpServletRequest request) { - long groupId = -1; - try { - groupId = PortalUtil.getScopeGroupId(request); - return getCurrentContext(groupId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static String getCurrentContext(long groupId) { - try { - PortalContext pContext = PortalContext.getConfiguration(); - return pContext.getCurrentScope(""+groupId); - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - /** - *

- * Returns the gCube authorisation token for the given user - *

- * @param scope infrastrucure context (scope) - * @param username the GCubeUser username @see {@link GCubeUser} - * @return the Token for the user in the context, or null if a token for this user could not be found - */ - public static String getCurrentUserToken(String scope, String username) { - String userToken = null; - - try { - ScopeProvider.instance.set(scope); - userToken = authorizationService().resolveTokenByUserAndContext(username, scope); - SecurityTokenProvider.instance.set(userToken); - } - catch (ObjectNotFound ex) { - userToken = generateAuthorizationToken(username, scope); - SecurityTokenProvider.instance.set(userToken); - _log.debug("generateAuthorizationToken OK for " + username + " in scope " + scope); - } - catch (Exception e) { - _log.error("Error while trying to generate token for user " + username + "in scope " + scope); - e.printStackTrace(); - return null; - } - - return userToken; - } - - public static String maskId(long idToMask) { - String toMask = ""+idToMask; - try { - return URLEncoder.encode(Base64.getEncoder().encodeToString(toMask.getBytes("utf-8")), "UTF-8"); - } catch (UnsupportedEncodingException e) { - e.printStackTrace(); - } - return null; - } - - public static String maskId(String toMask) { - try { - return URLEncoder.encode(Base64.getEncoder().encodeToString(toMask.getBytes("utf-8")), "UTF-8"); - } catch (UnsupportedEncodingException e) { - e.printStackTrace(); - } - return null; - } - - public static long unmaskId(String idToUnmask) { - String unmasked = new String(Base64.getDecoder().decode(idToUnmask)); - return Long.parseLong(unmasked); - } - - - public static List getAnalyticalToolkitServiceInstance(String context) throws Exception { - String currScope = ScopeProvider.instance.get(); - ScopeProvider.instance.set(context); - SimpleQuery query = queryFor(GCoreEndpoint.class); - query.addCondition("$resource/Profile/ServiceClass/text() eq '"+ ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_CLASS +"'"); - query.addCondition("$resource/Profile/ServiceName/text() eq '"+ ANALYTICAL_TOOLKIT_SERVICE_GCORE_ENDPOINT_NAME +"'"); - DiscoveryClient client = clientFor(GCoreEndpoint.class); - List toReturn = client.submit(query); - ScopeProvider.instance.set(currScope); - return toReturn; - } - - public static String getAnalyticalToolkitEndpoint(String context) { - List analyticalServices = null; - try { - analyticalServices = getAnalyticalToolkitServiceInstance(context); - if (analyticalServices == null || analyticalServices.isEmpty()) { - return "Cound not find Analytical Toolkit service"; - } - GCoreEndpoint endpoint = analyticalServices.get(0); - Collection list = endpoint.profile().endpoints().asCollection(); - - URI theURI = null; - for (Endpoint ep : list) { - if (ep.name().equals(Utils.ANALYTICAL_TOOLKIT_SERVICE_INTERFACE_NAME)) { - _log.info("Analytical Toolkit GCoreEndpoint: "+ep.uri()); - theURI = ep.uri(); - } - } - String endpointSSL = "https://"+theURI.getHost()+theURI.getPath(); - return endpointSSL; - - } catch (Exception e) { - e.printStackTrace(); - } - return null; - } - - public static List getDataMinerInstance(String scope) throws Exception { - String currScope = ScopeProvider.instance.get(); - ScopeProvider.instance.set(scope); - SimpleQuery query = queryFor(ServiceEndpoint.class); - query.addCondition("$resource/Profile/Category/text() eq '"+ SERVICE_ENDPOINT_CATEGORY +"'"); - query.addCondition("$resource/Profile/Name/text() eq '"+ SERVICE_ENDPOINT_NAME +"'"); - DiscoveryClient client = clientFor(ServiceEndpoint.class); - List toReturn = client.submit(query); - ScopeProvider.instance.set(currScope); - return toReturn; - } - - /** - * - * @param username - * @param scope - * @throws Exception - */ - private static String generateAuthorizationToken(String username, String scope) { - List userRoles = new ArrayList<>(); - userRoles.add(PFISHConstants.DEFAULT_ROLE); - String token; - try { - token = authorizationService().generateUserToken(new UserInfo(username, userRoles), scope); - } catch (Exception e) { - e.printStackTrace(); - return null; - } - return token; - } - - public static String getPhaseByFileName(String fileName) { - if (fileName.contains(PFISHConstants.SHOW_HATCHERY)) { - return PFISHConstants.SHOW_HATCHERY; - } - else if (fileName.contains(PFISHConstants.SHOW_PRE_ONGROWING)) { - return PFISHConstants.SHOW_PRE_ONGROWING; - } - else - return PFISHConstants.SHOW_GROW_OUT; - } - - public static String getBatchTypeName(String phase, String fileName) { - switch (phase) { - case PFISHConstants.SHOW_PRE_ONGROWING: - if (fileName.toLowerCase().contains("close")) - return PFISHConstants.TEMPLATE_PRE_ONGROWING_CLOSED; - else - return PFISHConstants.TEMPLATE_PRE_ONGROWING; - case PFISHConstants.SHOW_HATCHERY: { - if (fileName.toLowerCase().contains("aggregated")) { - if (fileName.toLowerCase().contains("close")) - return PFISHConstants.TEMPLATE_HATCHERY_AGGREGATED_CLOSED; - else - return PFISHConstants.TEMPLATE_HATCHERY_AGGREGATED; - } - else { - if (fileName.toLowerCase().contains("close")) - return PFISHConstants.TEMPLATE_HATCHERY_INDIVIDUAL_CLOSED; - else - return PFISHConstants.TEMPLATE_HATCHERY_INDIVIDUAL; - } - } - case PFISHConstants.SHOW_GROW_OUT: { - if (fileName.toLowerCase().contains("individual")){ - if (fileName.toLowerCase().contains("close")) - return PFISHConstants.TEMPLATE_GROWOUT_INDIVIDUAL_CLOSED; - else - return PFISHConstants.TEMPLATE_GROWOUT_INDIVIDUAL; - } - else { - if (fileName.toLowerCase().contains("close")) - return PFISHConstants.TEMPLATE_GROWOUT_AGGREGATED_CLOSED; - else - return PFISHConstants.TEMPLATE_GROWOUT_AGGREGATED; - } - } - default: - return null; - } - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/ValidationResult.java b/src/main/java/org/gcube/portlets/user/performfish/util/ValidationResult.java deleted file mode 100644 index d1c448a..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/ValidationResult.java +++ /dev/null @@ -1,35 +0,0 @@ -package org.gcube.portlets.user.performfish.util; - -public class ValidationResult { - boolean success; - String comment; - public boolean isSuccess() { - return success; - } - public void setSuccess(boolean success) { - this.success = success; - } - public String getComment() { - return comment; - } - public void setComment(String comment) { - this.comment = comment; - } - public ValidationResult(boolean success, String comment) { - super(); - this.success = success; - this.comment = comment; - } - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("ValidationResult [success="); - builder.append(success); - builder.append(", comment="); - builder.append(comment); - builder.append("]"); - return builder.toString(); - } - - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/AssociationComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/AssociationComparator.java deleted file mode 100644 index e192b61..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/AssociationComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.portlets.user.performfish.bean.Association; - - public class AssociationComparator implements Comparator { - @Override - public int compare(Association o1, Association o2) { - return o1.getShortName().compareTo(o2.getShortName()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/CompanyComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/CompanyComparator.java deleted file mode 100644 index ca9b69d..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/CompanyComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.portlets.user.performfish.bean.Company; - - public class CompanyComparator implements Comparator { - @Override - public int compare(Company o1, Company o2) { - return o1.getName().compareTo(o2.getName()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/CompanyMemberComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/CompanyMemberComparator.java deleted file mode 100644 index 345ad99..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/CompanyMemberComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.portlets.user.performfish.bean.CompanyMember; - - public class CompanyMemberComparator implements Comparator { - @Override - public int compare(CompanyMember o1, CompanyMember o2) { - return o1.getUser().getFullname().compareTo(o2.getUser().getFullname()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/FarmComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/FarmComparator.java deleted file mode 100644 index 5f570c4..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/FarmComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.portlets.user.performfish.bean.Farm; - - public class FarmComparator implements Comparator { - @Override - public int compare(Farm o1, Farm o2) { - return o1.getName().compareTo(o2.getName()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/FileVersionComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/FileVersionComparator.java deleted file mode 100644 index c64d01e..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/FileVersionComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.common.homelibary.model.versioning.WorkspaceVersion; - - public class FileVersionComparator implements Comparator { - @Override - public int compare(WorkspaceVersion o1, WorkspaceVersion o2) { - return o1.getName().compareTo(o2.getName()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/GenericFileComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/GenericFileComparator.java deleted file mode 100644 index 8100e31..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/GenericFileComparator.java +++ /dev/null @@ -1,12 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.common.storagehub.model.items.GenericFileItem; - -public class GenericFileComparator implements Comparator { - @Override - public int compare(GenericFileItem o1, GenericFileItem o2) { - return o1.getName().compareTo(o2.getName()); - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/TeamComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/TeamComparator.java deleted file mode 100644 index 4a684ce..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/TeamComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.vomanagement.usermanagement.model.GCubeTeam; - - public class TeamComparator implements Comparator { - @Override - public int compare(GCubeTeam o1, GCubeTeam o2) { - return o1.getTeamName().compareTo(o2.getTeamName()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/UserComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/UserComparator.java deleted file mode 100644 index f0f1568..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/UserComparator.java +++ /dev/null @@ -1,14 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.vomanagement.usermanagement.model.GCubeUser; - - public class UserComparator implements Comparator { - @Override - public int compare(GCubeUser o1, GCubeUser o2) { - return o1.getFullname().compareTo(o2.getFullname()); - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/WSItemComparator.java b/src/main/java/org/gcube/portlets/user/performfish/util/comparators/WSItemComparator.java deleted file mode 100644 index 8beda88..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/comparators/WSItemComparator.java +++ /dev/null @@ -1,20 +0,0 @@ -package org.gcube.portlets.user.performfish.util.comparators; - -import java.util.Comparator; - -import org.gcube.common.homelibrary.home.exceptions.InternalErrorException; -import org.gcube.common.homelibrary.home.workspace.WorkspaceItem; - - public class WSItemComparator implements Comparator { - @Override - public int compare(WorkspaceItem o1, WorkspaceItem o2) { - try { - return o1.getName().compareTo(o2.getName()); - } catch (InternalErrorException e) { - e.printStackTrace(); - } - return 0; - } - } - - diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/db/DBUtil.java b/src/main/java/org/gcube/portlets/user/performfish/util/db/DBUtil.java deleted file mode 100644 index 1229948..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/db/DBUtil.java +++ /dev/null @@ -1,361 +0,0 @@ -package org.gcube.portlets.user.performfish.util.db; - -import java.sql.Connection; -import java.sql.PreparedStatement; -import java.sql.ResultSet; -import java.sql.SQLException; -import java.sql.Statement; -import java.util.ArrayList; -import java.util.Date; -import java.util.List; -import java.util.UUID; - -import org.gcube.portlets.user.performfish.bean.Association; -import org.gcube.portlets.user.performfish.bean.Company; -import org.gcube.portlets.user.performfish.bean.Farm; -import org.postgresql.util.PGobject; - -import com.liferay.portal.kernel.log.Log; -import com.liferay.portal.kernel.log.LogFactoryUtil; - -public class DBUtil { - private static Log _log = LogFactoryUtil.getLog(DBUtil.class); - - public static List getCompanies(Connection conn) throws Exception { - _log.debug("getting Companies "); - List toReturn = new ArrayList<>(); - String selectSQL = "SELECT * FROM companies"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long companyId = rs.getLong("companyid"); - Long associationid = rs.getLong("associationid"); - boolean staged = rs.getBoolean("isstaged"); - Company toAdd = new Company(companyId, associationid, staged); - _log.debug("Adding " + toAdd); - toReturn.add(toAdd); - } - return toReturn; - } - - public static List getAllFarms(Connection conn) throws Exception { - _log.debug("getting Farms "); - List toReturn = new ArrayList<>(); - String selectSQL = "SELECT * FROM Farms"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long farmid = rs.getLong("farmid"); - String location = rs.getString("opt1"); - Long companyid = rs.getLong("companyid"); - String creator = rs.getString("opt2"); - Farm toAdd = new Farm(farmid, location, companyid, creator); - Date dateLastActivity = rs.getDate("dateLastActivity"); - toAdd.setDateLastActivity(dateLastActivity); - _log.debug("Adding " + toAdd); - toReturn.add(toAdd); - } - return toReturn; - } - - public static List getAllAssociations(Connection conn) throws Exception { - _log.debug("getting Associations "); - List toReturn = new ArrayList<>(); - String selectSQL = "SELECT * FROM Associations"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long associationid = rs.getLong("associationid"); - String createdBy = rs.getString("opt1"); - Association toAdd = new Association(associationid, createdBy); - _log.debug("Adding " + toAdd); - toReturn.add(toAdd); - } - return toReturn; - } - - public static List listCompaniesNotAssociatedToAssociations(Connection conn) throws Exception { - _log.debug("getting Companies not associated "); - List toReturn = new ArrayList<>(); - String selectSQL = "SELECT * FROM companies where companyid NOT IN (SELECT C.companyid FROM companies as C, associations as A WHERE C.associationid = A.associationid)"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long companyId = rs.getLong("companyid"); - Long associationid = rs.getLong("associationid"); - boolean staged = rs.getBoolean("isstaged"); - Company toAdd = new Company(companyId, associationid, staged); - _log.debug("Adding " + toAdd); - toReturn.add(toAdd); - } - return toReturn; - } - - public static List getCompaniesIdsByAssociation(Connection conn, long associationId) throws Exception { - _log.debug("getting Companies of association with id = " +associationId); - List toReturn = new ArrayList<>(); - String selectSQL = "SELECT companyId FROM Associations as A, Companies as C WHERE A.associationId = C.associationId and A.associationId = ?"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - preparedStatement.setLong(1, associationId); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long companyid = rs.getLong("companyid"); - toReturn.add(companyid); - } - return toReturn; - } - - public static List listFarmsByCompanyId(Connection conn, long companyId) throws Exception { - _log.debug("getting Farms of company with id = " +companyId); - List toReturn = new ArrayList<>(); - String selectSQL = "SELECT farmid, F.opt1, F.opt2, F.dateLastActivity, F.companyid FROM Farms as F, Companies as C WHERE C.companyid = F.companyid and F.companyId = ?"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - preparedStatement.setLong(1, companyId); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long farmid = rs.getLong("farmid"); - String location = rs.getString("opt1"); - Long companyid = rs.getLong("companyid"); - String creator = rs.getString("opt2"); - Farm toAdd = new Farm(farmid, location, companyid, creator); - Date dateLastActivity = rs.getDate("dateLastActivity"); - toAdd.setDateLastActivity(dateLastActivity); - _log.debug("Adding " + toAdd); - toReturn.add(toAdd); - } - return toReturn; - } - - public static long getCompanyByFarmId(Connection conn, long farmId) throws Exception { - _log.debug("getting company of farm with id = " +farmId); - long toReturn = -1; - String selectSQL = "SELECT C.companyid FROM Farms as F, Companies as C WHERE C.companyid = F.companyid and F.farmId = ?"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - preparedStatement.setLong(1, farmId); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long companyid = rs.getLong("companyid"); - toReturn = companyid; - } - return toReturn; - } - - - public static boolean addCompany(Connection conn, String[] companyIdsToAdd, String username) { - String insertTableSQL = "INSERT INTO companies" - + "(companyid, opt1, uuid) VALUES" - + "(?,?,?)"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(insertTableSQL); - for (int i = 0; i < companyIdsToAdd.length; i++) { - PGobject toInsertUUID = new PGobject(); - toInsertUUID.setType("uuid"); - toInsertUUID.setValue(UUID.randomUUID().toString()); - - preparedStatement.setLong(1, Long.parseLong(companyIdsToAdd[i])); - preparedStatement.setString(2, "Created by: "+username); - preparedStatement.setObject(3,toInsertUUID); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - } - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean addAssociation(Connection conn, String[] associationsIdsToAdd, String username) { - String insertTableSQL = "INSERT INTO associations" - + "(associationid, opt1, uuid) VALUES" - + "(?,?,?)"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(insertTableSQL); - for (int i = 0; i < associationsIdsToAdd.length; i++) { - - PGobject toInsertUUID = new PGobject(); - toInsertUUID.setType("uuid"); - toInsertUUID.setValue(UUID.randomUUID().toString()); - - preparedStatement.setLong(1, Long.parseLong(associationsIdsToAdd[i])); - preparedStatement.setString(2, "Created by: "+username); - preparedStatement.setObject(3,toInsertUUID); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - } - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean associateCompaniesToAssociation(Connection conn, long associationId, long[] companiesId) { - String updateTableSQL = "UPDATE Companies SET associationid = ? WHERE companyId = ?"; - for (int i = 0; i < companiesId.length; i++) { - try { - PreparedStatement preparedStatement = conn.prepareStatement(updateTableSQL); - preparedStatement.setLong(1, associationId); - preparedStatement.setLong(2, companiesId[i]); - preparedStatement .executeUpdate(); - }catch (SQLException e) { - e.printStackTrace(); - return false; - } - } - return true; - } - - public static boolean deleteFarm(Connection conn, long farmId) { - String updateTableSQL = "DELETE FROM Farms WHERE farmId = ?"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(updateTableSQL); - preparedStatement.setLong(1, farmId); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean editFarm(Connection conn, long farmId, String name, String farmLocation) { - String updateTableSQL = "Update Farms set name = ?, opt1 = ? WHERE farmId = ?"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(updateTableSQL); - preparedStatement.setString(1, name); - preparedStatement.setString(2, farmLocation); - preparedStatement.setLong(3, farmId); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean updateFarmLastSubmissionActivity(Connection conn, long farmId, java.sql.Date lastActivity) { - String updateTableSQL = "Update Farms set datelastactivity = ? WHERE farmId = ?"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(updateTableSQL); - preparedStatement.setDate(1, lastActivity); - preparedStatement.setLong(2, farmId); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean addFarm(Connection conn, long farmId, long companyId, String farmName, String farmLocation, String usernameCreator) { - String insertTableSQL = "INSERT INTO Farms" - + "(farmid, opt1, companyid, opt2, uuid, name) VALUES" - + "(?,?,?,?,?,?)"; - try { - PGobject toInsertUUID = new PGobject(); - toInsertUUID.setType("uuid"); - toInsertUUID.setValue(UUID.randomUUID().toString()); - - - PreparedStatement preparedStatement = conn.prepareStatement(insertTableSQL); - preparedStatement.setLong(1, farmId); - preparedStatement.setString(2, farmLocation); - preparedStatement.setLong(3, companyId); - preparedStatement.setString(4, usernameCreator); - preparedStatement.setObject(5,toInsertUUID); - preparedStatement.setObject(6,farmName); - // execute insert SQL stetement - preparedStatement.executeUpdate(); - - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean removeCompany(Connection conn, String[] companyIdsToRemove) { - String insertTableSQL = "DELETE FROM companies WHERE companyId = ?"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(insertTableSQL); - for (int i = 0; i < companyIdsToRemove.length; i++) { - preparedStatement.setLong(1, Long.parseLong(companyIdsToRemove[i])); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - } - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static boolean setCompanyStaged(Connection conn, long companyId) { - String insertTableSQL = "UPDATE companies SET isStaged = true WHERE companyId = ?"; - try { - PreparedStatement preparedStatement = conn.prepareStatement(insertTableSQL); - preparedStatement.setLong(1, companyId); - // execute insert SQL stetement - preparedStatement .executeUpdate(); - } catch (SQLException e) { - e.printStackTrace(); - return false; - } - return true; - } - - public static Company getCompanyById(Connection conn, long companyId) throws Exception { - _log.debug("getting Companies "); - Company toReturn = null; - String selectSQL = "SELECT companyid, associationid, isStaged FROM companies WHERE companyId = ?"; - PreparedStatement preparedStatement = conn.prepareStatement(selectSQL); - preparedStatement.setLong(1, companyId); - ResultSet rs = preparedStatement.executeQuery(); - while (rs.next()) { - Long associationid = rs.getLong("associationid"); - boolean staged = rs.getBoolean("isStaged"); - toReturn = new Company(companyId, associationid, staged); - } - return toReturn; - } - /** - * - * @param conn - * @throws SQLException - */ - protected static void initializeTablesIfNotExist(Connection conn) throws SQLException { - String assTable = "CREATE TABLE IF NOT EXISTS Associations (" - + "AssociationId bigint PRIMARY KEY NOT NULL, " - + "Opt1 text, " - + "Opt2 text, " - + "dateCreated date)"; - - - String companyTable = "CREATE TABLE IF NOT EXISTS Companies (" - + "CompanyId bigint PRIMARY KEY NOT NULL, " - + "isStaged boolean NOT NULL DEFAULT FALSE, " - + "Opt1 text, " - + "Opt2 text, " - + "AssociationId bigint, " - + "FOREIGN KEY(AssociationId) REFERENCES Associations(AssociationId))"; - - String farmTable = "CREATE TABLE IF NOT EXISTS Farms (" - + "FarmId bigint PRIMARY KEY NOT NULL, " - + "Opt1 text, " - + "Opt2 text, " - + "dateLastActivity date, " - + "CompanyId bigint, " - + "FOREIGN KEY(CompanyId) REFERENCES Companies(CompanyId))"; - Statement stmt = conn.createStatement(); - stmt.execute(assTable); - stmt.execute(companyTable); - stmt.execute(farmTable); - } -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/db/DB_Credentials.java b/src/main/java/org/gcube/portlets/user/performfish/util/db/DB_Credentials.java deleted file mode 100644 index 95b0498..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/db/DB_Credentials.java +++ /dev/null @@ -1,70 +0,0 @@ -package org.gcube.portlets.user.performfish.util.db; - -public class DB_Credentials { - - private String DBURL, DBName, user, pwd; - - public DB_Credentials(String DBURL, String DBName, String user, String pwd) { - super(); - this.DBURL = DBURL; - this.DBName = DBName; - this.user = user; - this.pwd = pwd; - } - - public DB_Credentials() { - // TODO Auto-generated constructor stub - } - - public String getJDBCURL() { - return new StringBuilder("jdbc:postgresql://").append(DBURL).append("/").append(DBName).append("?user=").append(this.user).toString(); - } - - public String getDBURL() { - return DBURL; - } - - public void setDBURL(String dBURL) { - DBURL = dBURL; - } - - public String getDBName() { - return DBName; - } - - public void setDBName(String dBName) { - DBName = dBName; - } - - public String getUser() { - return user; - } - - public void setUser(String user) { - this.user = user; - } - - public String getPwd() { - return pwd; - } - - public void setPwd(String pwd) { - this.pwd = pwd; - } - - @Override - public String toString() { - StringBuilder builder = new StringBuilder(); - builder.append("DB_Credentials [DBURL="); - builder.append(DBURL); - builder.append(", DBName="); - builder.append(DBName); - builder.append(", user="); - builder.append(user); - builder.append(", pwd="); - builder.append(pwd); - builder.append("]"); - return builder.toString(); - } - -} diff --git a/src/main/java/org/gcube/portlets/user/performfish/util/db/DatabaseConnection.java b/src/main/java/org/gcube/portlets/user/performfish/util/db/DatabaseConnection.java deleted file mode 100644 index 7319feb..0000000 --- a/src/main/java/org/gcube/portlets/user/performfish/util/db/DatabaseConnection.java +++ /dev/null @@ -1,101 +0,0 @@ -package org.gcube.portlets.user.performfish.util.db; -import static org.gcube.resources.discovery.icclient.ICFactory.clientFor; -import static org.gcube.resources.discovery.icclient.ICFactory.queryFor; - -import java.sql.Connection; -import java.sql.DriverManager; -import java.sql.SQLException; -import java.util.List; - -import org.gcube.common.encryption.StringEncrypter; -import org.gcube.common.resources.gcore.ServiceEndpoint; -import org.gcube.common.resources.gcore.ServiceEndpoint.AccessPoint; -import org.gcube.common.scope.api.ScopeProvider; -import org.gcube.portlets.user.performfish.util.PFISHConstants; -import org.gcube.resources.discovery.client.api.DiscoveryClient; -import org.gcube.resources.discovery.client.queries.api.SimpleQuery; - -import com.liferay.portal.kernel.log.Log; -import com.liferay.portal.kernel.log.LogFactoryUtil; - - -public class DatabaseConnection { - private static Log _log = LogFactoryUtil.getLog(DatabaseConnection.class); - - private static DatabaseConnection instance; - private Connection connection; - - private DatabaseConnection(DB_Credentials dbparams) throws SQLException { - try { - Class.forName("org.postgresql.Driver"); - this.connection = DriverManager.getConnection(dbparams.getJDBCURL(), dbparams.getUser(), dbparams.getPwd()); - DBUtil.initializeTablesIfNotExist(connection); - } catch (ClassNotFoundException ex) { - _log.error("Database Connection Creation Failed : " + ex.getMessage()); - } - } - - public Connection getConnection() { - return connection; - } - - public static DatabaseConnection getInstance(String context) throws Exception { - if (instance == null || instance.getConnection().isClosed()) { - DB_Credentials cred = getDBCredentials(context); - - instance = new DatabaseConnection(cred); - _log.info("Database Connection acquired for : " + cred.getJDBCURL()); - } - return instance; - } - /** - * - * @param request - * @param response - * @param instance - * @return the credentails, and if the db is empty created the schema - * @throws Exception - */ - private static DB_Credentials getDBCredentials(String currContext) throws Exception { - AccessPoint ac = getDBAccessPoint(currContext); - DB_Credentials toReturn = new DB_Credentials(); - _log.debug("Got AccessPoint:" + ac.toString()); - String dbAddress = ac.address(); //"localhost:5432"; // - toReturn.setDBURL(dbAddress); - _log.debug("DB address: "+ dbAddress); - String dbName = ac.name(); - toReturn.setDBName(dbName); - _log.debug("DB name: "+ dbName); - String dbUser = ac.username(); - toReturn.setUser(dbUser); - _log.debug("DB user: " + dbUser); - String jdbcURL = new StringBuffer("jdbc:postgresql://").append(dbAddress).append("/").append(dbName).toString(); - _log.debug("jdbc.url: "+jdbcURL); - ScopeProvider.instance.set(currContext); - String pwd = StringEncrypter.getEncrypter().decrypt(ac.password()); - toReturn.setPwd(pwd); - _log.debug("Decrypted Password OK"); - - return toReturn; - } - /** - * Gets the survey DB access point. - * - * @return the survey DB access point - */ - private static AccessPoint getDBAccessPoint(String currContext) { - //set the context for this resource - ScopeProvider.instance.set(currContext); - //construct the xquery - SimpleQuery query = queryFor(ServiceEndpoint.class); - query.addCondition("$resource/Profile/Name/text() eq '"+ PFISHConstants.PF_DB_SERVICE_ENDPOINT_NAME +"'"); - query.addCondition("$resource/Profile/Category/text() eq '"+ PFISHConstants.PF_DB_SERVICE_ENDPOINT_CATEGORY +"'"); - - DiscoveryClient client = clientFor(ServiceEndpoint.class); - List conf = client.submit(query); - ServiceEndpoint res = conf.get(0); - - return res.profile().accessPoints().iterator().next(); - } - -} diff --git a/src/main/webapp/WEB-INF/liferay-display.xml b/src/main/webapp/WEB-INF/liferay-display.xml deleted file mode 100644 index 9fef571..0000000 --- a/src/main/webapp/WEB-INF/liferay-display.xml +++ /dev/null @@ -1,27 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - \ No newline at end of file diff --git a/src/main/webapp/WEB-INF/liferay-plugin-package.properties b/src/main/webapp/WEB-INF/liferay-plugin-package.properties deleted file mode 100644 index 21cb963..0000000 --- a/src/main/webapp/WEB-INF/liferay-plugin-package.properties +++ /dev/null @@ -1,9 +0,0 @@ -name=PerformFISH-Apps -module-group-id=liferay -module-incremental-version=8 -tags= -short-description= -change-log= -page-url=http://www.gcube-system.org -author=M. Assante, CNR-ISTI -licenses=EUPL diff --git a/src/main/webapp/WEB-INF/liferay-portlet.xml b/src/main/webapp/WEB-INF/liferay-portlet.xml deleted file mode 100644 index 23226d2..0000000 --- a/src/main/webapp/WEB-INF/liferay-portlet.xml +++ /dev/null @@ -1,257 +0,0 @@ - - - - - - manage-company-users - /icon.png - false - true - /css/main.css - - /js/main.js - - - manage-company-users-portlet - - - - manage-company-admins - /icon.png - false - true - /css/main.css - - /js/main.js - - - manage-company-admins-portlet - - - - company-repository - /icon.png - org.gcube.portlets.user.performfish.CompanyFarmRepositoryConfigurationAction - false - true - /css/main.css - - /js/main.js - - - company-repository-portlet - - - - associate-users-to-company - /icon.png - false - /css/main.css - - /js/main.js - - - associate-users-to-company-portlet - - - - promote-administrators - /icon.png - false - /css/main.css - - /js/main.js - - - promote-administrators-portlet - - - - empty-forms-documents-display - /icon.png - org.gcube.portlets.user.performfish.EmptyFormsConfigurationAction - false - /css/main.css - /js/jquery.min.js - - /js/main.js - - - empty-forms-documents-display-portlet - - - - submitted-form-validation - /icon.png - false - /css/main.css - - /js/main.js - - - submitted-form-validation-portlet - - - - manage-companies - /icon.png - false - /css/main.css - - /js/main.js - - manage-companies-portlet - - - add-new-company - /icon.png - false - /css/main.css - - /js/main.js - - add-new-company-portlet - - - manage-farms - /icon.png - false - /css/main.css - - /js/main.js - - manage-farms-portlet - - - manage-farm-administratos - /icon.png - false - /css/main.css - - /js/main.js - - - manage-farm-administratos-portlet - - - - promote-farm-administrators - /icon.png - false - /css/main.css - - /js/main.js - - - promote-farm-administrators-portlet - - - - manage-farm-users - /icon.png - false - /css/main.css - - /js/main.js - - manage-farm-users-portlet - - - associate-users-to-farm - /icon.png - false - /css/main.css - - /js/main.js - - - associate-users-to-farm-portlet - - - - - set-company-administrators-super-user - - /icon.png - false - true - /css/main.css - - /js/main.js - - - set-company-administrators-super-user-portlet - - true - - - set-farm-administrators - /icon.png - false - /css/main.css - - /js/main.js - - - set-farm-administrators-portlet - - true - - - company-private-repository - /icon.png - false - true - /css/main.css - - /js/main.js - - - company-private-repository-portlet - - - - manage-associations - /icon.png - false - true - /css/main.css - - /js/main.js - - - manage-associations-portlet - - - - associate-companies-to-association - /icon.png - false - true - /css/main.css - - /js/main.js - - - associate-companies-to-association-portlet - - true - - - association-dashboard - /icon.png - false - true - /css/table.css - - /js/main.js - - - association-dashboard-portlet - - - - administrator - Administrator - - \ No newline at end of file diff --git a/src/main/webapp/WEB-INF/portlet.xml b/src/main/webapp/WEB-INF/portlet.xml deleted file mode 100644 index 86eb025..0000000 --- a/src/main/webapp/WEB-INF/portlet.xml +++ /dev/null @@ -1,492 +0,0 @@ - - - - - manage-company-users - Manage Company Users - org.gcube.portlets.user.performfish.ManageCompanyUsers - - view-template - /html/managecompanyusers/company_users.jsp - - 0 - - text/html - view - - - Manage Company Regular Users - Manage Company Users - - - - administrator - - - - manage-company-admins - Manage Company Admins - - org.gcube.portlets.user.performfish.ManageCompanyAdmins - - - view-template - /html/managecompanyadmins/company_admins.jsp - - 0 - - text/html - view - - - Manage Company Administrators - Manage Company Admins - - - - administrator - - - - company-repository - Company Farm Repository - org.gcube.portlets.user.performfish.CompanyFarmRepository - - view-template - /html/farmrepository/view_farm_repository.jsp - - - config-template - /html/farmrepository/config.jsp - - - add-process-action-success-action - false - - 0 - - text/html - view - config - - - Company Farm Repository - Company Farm Repository - - - - administrator - - - - associate-users-to-company - Associate Users To Company - - org.gcube.portlets.user.performfish.AssociateUsersToCompany - - view-template - /html/adduserstocompany/add_users_toCompany.jsp - - 0 - - text/html - view - - - Associate Users To Company - Associate Users To Company - - - - administrator - - - - promote-administrators - Promote Company Administrators - - org.gcube.portlets.user.performfish.PromoteCompanyAdministrators - - view-template - /html/adduserstocompany/promote_company_administrators.jsp - - 0 - - text/html - view - - - Promote Company Administrators - Promote Company Administrators - - - - administrator - - - - empty-forms-documents-display - Empty Forms Documents Display - - org.gcube.portlets.user.performfish.EmptyFormsDocumentsDisplay - - view-template - /html/emptyformsdocumentsdisplay/empty_forms_fileupload_display.jsp - - - config-template - /html/emptyformsdocumentsdisplay/empty_forms_config.jsp - - 0 - - text/html - view - config - - - Documents for initials submission with instructions and new - submissions - Empty Forms Documents Display - - - - administrator - - - - submitted-form-validation - Submitted form validation - - org.gcube.portlets.user.performfish.SubmittedFormValidation - - view-template - /html/submittedformvalidation/validation.jsp - - 0 - - text/html - view - - - Submitted Form Validation - Submitted Form Validation - - - - - portletSetupShowBorders - false - - - - administrator - - - - manage-companies - Manage Companies - org.gcube.portlets.user.performfish.ManageCompanies - - view-template - /html/managecompanies/manage_companies.jsp - - 0 - - text/html - view - - - Manage Companies - Manage Companies - - - - administrator - - - - add-new-company - Add New Company or Association - org.gcube.portlets.user.performfish.AddNewCompanyOrAssociation - - view-template - /html/addnewcompany_or_assoc/AddNewCompany.jsp - - 0 - - text/html - view - - - Add New Company or Association - Add New Company - - - - administrator - - - - manage-farms - Manage Company Farms - org.gcube.portlets.user.performfish.ManageFarms - - view-template - /html/managefarms/managefarms_view.jsp - - 0 - - text/html - view - - - Manage Company Farms - Manage Farms - - - - administrator - - - - manage-farm-administratos - Manage Farm Administrators - - org.gcube.portlets.user.performfish.ManageFarmAdministrators - - view-template - /html/managefarmadministratos/farm_admins.jsp - - 0 - - text/html - view - - - Manage Farm Administrators - Manage Farm Administrators - - - - administrator - - - - promote-farm-administrators - Promote Farm Administrators - - org.gcube.portlets.user.performfish.PromoteFarmAdministrators - - view-template - /html/adduserstocompany/promote_farm_administrators.jsp - - 0 - - text/html - view - - - Promote Farm Administrators - Promote Farm Administrators - - - - administrator - - - - manage-farm-users - Manage Farm Users - org.gcube.portlets.user.performfish.ManageFarmUsers - - view-template - /html/managefarmusers/manage_farm_users_view.jsp - - 0 - - text/html - view - - - Manage Farm Users - Manage Farm Users - - - - administrator - - - - associate-users-to-farm - Associate Users To Farm - - org.gcube.portlets.user.performfish.AssociateUsersToFarm - - view-template - /html/adduserstocompany/add_users_toFarm.jsp - - 0 - - text/html - view - - - Associate Users To Farm - Associate Users To Farm - - - - administrator - - - - set-company-administrators-super-user - Set Company Administrators Super User - - org.gcube.portlets.user.performfish.SetCompanyAdministratorsSuperUser - - view-template - /html/setcompanyadministratorssuperuser/set_company_admin.jsp - - 0 - - text/html - view - - - Set Company Administrators Super User - Set Company Administrators Super User - - - - administrator - - - - set-farm-administrators - Set Farm Administrators - - org.gcube.portlets.user.performfish.SetFarmAdministrators - - - view-template - /html/setfarmadministrators/set_farm_admin.jsp - - 0 - - text/html - view - - - Set Farm Administrators - Set Farm Administrators - - - - administrator - - - - company-private-repository - Company Private Repository - - org.gcube.portlets.user.performfish.CompanyPrivateRepository - - - view-template - /html/companyprivaterepository/company_private_repository.jsp - - 0 - - text/html - view - - - Company Private Repository - Company Private Repository - - - - administrator - - - - manage-associations - Manage Associations - - org.gcube.portlets.user.performfish.ManageAssociations - - - view-template - /html/manageassociations/manage_associations_view.jsp - - 0 - - text/html - view - - - Manage Associations - Manage Associations - - - - administrator - - - - associate-companies-to-association - Associate Companies To Association - - org.gcube.portlets.user.performfish.AssociateCompaniesToAssociation - - - view-template - - /html/associatecompaniestoassociation/companies_to_ass_view.jsp - - - 0 - - text/html - view - - - Associate Companies To Association - - Associate Companies To Association - - - - - administrator - - - - association-dashboard - Association Dashboard - - org.gcube.portlets.user.performfish.AssociationDashboard - - - view-template - /html/associationdashboard/association_dashboard.jsp - - 0 - - text/html - view - - - Association Dashboard - Association Dashboard - - - - administrator - - - \ No newline at end of file diff --git a/src/main/webapp/WEB-INF/web.xml b/src/main/webapp/WEB-INF/web.xml deleted file mode 100644 index 077c985..0000000 --- a/src/main/webapp/WEB-INF/web.xml +++ /dev/null @@ -1,2 +0,0 @@ - - \ No newline at end of file diff --git a/src/main/webapp/css/loading_result.gif 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vertical-align: middle; -} - -.ajax-file-upload-progress { - margin: 5px 10px 5px 0px; - position: relative; - width: 250px; - border: 1px solid #ddd; - padding: 1px; - border-radius: 3px; - display: inline-block; - color: #FFFFFF; -} - -.ajax-file-upload-bar { - background-color: #0ba1b5; - width: 0; - height: 20px; - border-radius: 3px; - color: #FFFFFF; -} - -.ajax-file-upload-percent { - position: absolute; - display: inline-block; - top: 3px; - left: 48% -} - -.ajax-file-upload-red { - -moz-box-shadow: inset 0 39px 0 -24px #e67a73; - -webkit-box-shadow: inset 0 39px 0 -24px #e67a73; - box-shadow: inset 0 39px 0 -24px #e67a73; - background-color: #e4685d; - -moz-border-radius: 4px; - -webkit-border-radius: 4px; - border-radius: 4px; - display: inline-block; - color: #fff; - font-family: arial; - font-size: 13px; - font-weight: normal; - padding: 4px 15px; - text-decoration: none; - text-shadow: 0 1px 0 #b23e35; - cursor: pointer; - vertical-align: top; - margin: 5px 10px 5px 0px; -} - -.ajax-file-upload-green { - background-color: #77b55a; - -moz-border-radius: 4px; - -webkit-border-radius: 4px; - border-radius: 4px; - margin: 0; - padding: 0; - display: inline-block; - color: #fff; - font-family: arial; - font-size: 13px; - font-weight: normal; - padding: 4px 15px; - text-decoration: none; - cursor: pointer; - text-shadow: 0 1px 0 #5b8a3c; - vertical-align: top; - margin: 5px 10px 5px 0px; -} - -.ajax-file-upload { - font-family: Arial, Helvetica, sans-serif; - font-size: 16px; - font-weight: bold; - padding: 15px 20px; - cursor: pointer; - line-height: 20px; - height: 25px; - margin: 0 10px 10px 0; - display: inline-block; - background: #fff; - border: 1px solid #e8e8e8; - color: #888; - text-decoration: none; - border-radius: 3px; - -webkit-border-radius: 3px; - -moz-border-radius: 3px; - -moz-box-shadow: 0 2px 0 0 #e8e8e8; - -webkit-box-shadow: 0 2px 0 0 #e8e8e8; - box-shadow: 0 2px 0 0 #e8e8e8; - padding: 6px 10px 4px 10px; - color: #fff; - background: #2f8ab9; - border: none; - -moz-box-shadow: 0 2px 0 0 #13648d; - -webkit-box-shadow: 0 2px 0 0 #13648d; - box-shadow: 0 2px 0 0 #13648d; - vertical-align: middle; -} - -.ajax-file-upload:hover { - background: #3396c9; - -moz-box-shadow: 0 2px 0 0 #15719f; - -webkit-box-shadow: 0 2px 0 0 #15719f; - box-shadow: 0 2px 0 0 #15719f; -} - -.ajax-upload-dragdrop { - background: url("up_img.png") no-repeat 50%; - border: 2px dotted #A5A5C7; - width: 90% !important; - height: 180px; - color: #DADCE3; - text-align: left; - vertical-align: middle; - padding: 10px 10px 0px 10px; -} - -.state-hover { - border: 2px solid #A5A5C7; -} - -.ajax-file-upload-container { - margin: -52px 0px 20px 10px; - width: 90%; - background-color: white; -} \ No newline at end of file diff --git a/src/main/webapp/css/table.css b/src/main/webapp/css/table.css deleted file mode 100644 index ceb91e5..0000000 --- a/src/main/webapp/css/table.css +++ /dev/null @@ -1,42 +0,0 @@ -table.paleBlueRows { - font-family: Tahoma, Geneva, sans-serif; - border: 1px solid #FFFFFF; - width: 100%; - text-align: left; - border-collapse: collapse; -} -table.paleBlueRows td, table.paleBlueRows th { - border: 1px solid #FFFFFF; - padding: 3px 5px; -} -table.paleBlueRows tbody td { - font-size: 13px; -} -table.paleBlueRows tr:nth-child(even) { - background: #D0E4F5; -} -table.paleBlueRows thead { - background: #0B6FA4; - border-bottom: 5px solid #FFFFFF; -} -table.paleBlueRows thead th { - font-size: 15px; - font-weight: bold; - color: #FFFFFF; - text-align: left; - border-left: 2px solid #FFFFFF; -} -table.paleBlueRows thead th:first-child { - border-left: none; -} - -table.paleBlueRows tfoot { - font-size: 14px; - font-weight: bold; - color: #333333; - background: #D0E4F5; - border-top: 3px solid #444444; -} -table.paleBlueRows tfoot td { - font-size: 14px; -} \ No newline at end of file diff --git a/src/main/webapp/css/up_img.png b/src/main/webapp/css/up_img.png deleted file mode 100644 index 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zXid|2Zs^GZ?e~IGZ{lMN`LnfdP`I#qODp(#_Unk76T>PTz(6G(fPD%??ac%5@aq4d j{#R1)e}usRO#sPTYL!QAbI)JU9Du&IkyfRKW9)wbBb`!n diff --git a/src/main/webapp/html/addnewcompany_or_assoc/AddNewCompany.jsp b/src/main/webapp/html/addnewcompany_or_assoc/AddNewCompany.jsp deleted file mode 100644 index c57ebe2..0000000 --- a/src/main/webapp/html/addnewcompany_or_assoc/AddNewCompany.jsp +++ /dev/null @@ -1,117 +0,0 @@ -<%@include file="../init.jsp"%> -<% - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - String vreName = (String) renderRequest.getAttribute("vreName"); - pageContext.setAttribute("vreName", vreName); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List availableTeams = (List) request.getAttribute("availableTeams"); -%> - - Back to manage companies - -

Available teams to promote as Company or Association in ${vreName }:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalteams = availableTeams.size(); - List sortableTeams = ListUtil.subList(availableTeams, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableTeams, new TeamComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableTeams); - } - pageContext.setAttribute("results", sortableTeams); - pageContext.setAttribute("total", totalteams); - %> - - - - ${item.teamName} - ${item.teamId} - ${item.description} - - - - - - - - - - - Liferay.provide( - window, - 'makeCompanies', - function() { - var selectedTeamIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (selectedTeamIds && confirm("Are you sure to make the selected team a Company? Cannot be undone via GUI")) { - document.fm.selectedTeamIds.value = selectedTeamIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - Liferay.provide( - window, - 'makeAssociations', - function() { - var selectedTeamIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (selectedTeamIds && confirm("Are you sure to make the selected team an Association? Cannot be undone via GUI")) { - document.fm.selectedTeamIds.value = selectedTeamIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/adduserstocompany/add_users_toCompany.jsp b/src/main/webapp/html/adduserstocompany/add_users_toCompany.jsp deleted file mode 100644 index 0863c68..0000000 --- a/src/main/webapp/html/adduserstocompany/add_users_toCompany.jsp +++ /dev/null @@ -1,118 +0,0 @@ -<%@include file="../init.jsp"%> -<% - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team team = (Team) request.getAttribute("theTeam"); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - List siteUsers = Utils.listVREUsersNotAssociatedToAnyCompany(team.getTeamId(), group.getGroupId()); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - pageContext.setAttribute("companyName", team.getName()); -%> - - Back to manage company users - -
- - - - - - - - -
-
-

${companyName} -

-
-

Available users to associate to <%= team.getName() %>:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = siteUsers.size(); - List sortableUsers = ListUtil.subList(siteUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - - Liferay.provide( - window, - 'associateCompanyUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (addUserIds && confirm("Are you sure you want to associate the selected users to this company?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/adduserstocompany/add_users_toFarm.jsp b/src/main/webapp/html/adduserstocompany/add_users_toFarm.jsp deleted file mode 100644 index 70590ff..0000000 --- a/src/main/webapp/html/adduserstocompany/add_users_toFarm.jsp +++ /dev/null @@ -1,119 +0,0 @@ -<%@include file="../init.jsp"%> -<% - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team team = (Team) request.getAttribute("theTeam"); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List nonFarmMembers = (List) request.getAttribute("nonFarmMembers"); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - pageContext.setAttribute("farmName", team.getName()); -%> - - Back to manage farm users - -
- - - - - - - - -
-
-

${farmName} -

-
-

Available company users to associate to ${farmName}:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = nonFarmMembers.size(); - List sortableUsers = ListUtil.subList(nonFarmMembers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - - Liferay.provide( - window, - 'associateFarmUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (addUserIds && confirm("Are you sure you want to associate the selected users to this farm?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/adduserstocompany/promote_company_administrators.jsp b/src/main/webapp/html/adduserstocompany/promote_company_administrators.jsp deleted file mode 100644 index 15e0f18..0000000 --- a/src/main/webapp/html/adduserstocompany/promote_company_administrators.jsp +++ /dev/null @@ -1,118 +0,0 @@ -<%@include file="../init.jsp"%> -<% - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team team = (Team) request.getAttribute("theTeam"); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List siteUsers = Utils.getRegularCompanyMembers(team.getTeamId(), team.getGroupId()); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - pageContext.setAttribute("companyName", team.getName()); - %> - - - Back to manage company Administrators - -
- - - - - - - - -
-
-

${companyName} -

-
-

Users currently associated to <%= team.getName() %> that can be promoted as Administrators:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = siteUsers.size(); - List sortableUsers = ListUtil.subList(siteUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new org.gcube.portlets.user.performfish.util.comparators.CompanyMemberComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - Liferay.provide( - window, - 'promoteAdminUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - if (addUserIds && confirm("Are you sure you want to promote Administrator to the selected user(s)?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/adduserstocompany/promote_farm_administrators.jsp b/src/main/webapp/html/adduserstocompany/promote_farm_administrators.jsp deleted file mode 100644 index a910862..0000000 --- a/src/main/webapp/html/adduserstocompany/promote_farm_administrators.jsp +++ /dev/null @@ -1,119 +0,0 @@ -<%@include file="../init.jsp"%> -<% - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - GCubeTeam theFarm = (GCubeTeam) request.getAttribute("theFarm"); - pageContext.setAttribute("theFarm", theFarm); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List siteUsers = Utils.getRegularFarmMembers(theFarm.getTeamId(), theFarm.getGroupId()); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - pageContext.setAttribute("theFarmName", theFarm.getTeamName()); - %> - - - Back to manage Farm Administrators - -
- - - - - - - - -
-
-

${theFarmName} -

-
-

Users currently associated to ${theFarmName} that can be promoted as Administrators:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = siteUsers.size(); - List sortableUsers = ListUtil.subList(siteUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - Liferay.provide( - window, - 'promoteAdminUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - if (addUserIds && confirm("Are you sure you want to promote Administrator to the selected user(s)?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/associatecompaniestoassociation/companies_to_ass_view.jsp b/src/main/webapp/html/associatecompaniestoassociation/companies_to_ass_view.jsp deleted file mode 100644 index ca72a85..0000000 --- a/src/main/webapp/html/associatecompaniestoassociation/companies_to_ass_view.jsp +++ /dev/null @@ -1,106 +0,0 @@ -<%@include file="../init.jsp"%> -<% -Boolean operationFinished = (Boolean) request.getAttribute("operationFinished"); -if (!operationFinished) { - Team selectedAssociation = (Team) renderRequest.getAttribute("selectedAssociation"); - pageContext.setAttribute("selectedAssociation", selectedAssociation); - List companies = (List ) renderRequest.getAttribute("companies"); - pageContext.setAttribute("companies", companies); - String vreName = (String) renderRequest.getAttribute("vreName"); - pageContext.setAttribute("vreName", vreName); - RowChecker rowChecker = new RowChecker(renderResponse); - String portletURLString = PortalUtil.getCurrentURL(request); - String currentGroupId = PortalUtil.getScopeGroupId(request)+""; -%> - -

- Select the companies to associate to ${selectedAssociation.name} (${selectedAssociation.description}): -

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalCompanies = companies.size(); - List sortableCompanies = ListUtil.subList(companies, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableCompanies, new CompanyComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableCompanies); - } - pageContext.setAttribute("results", sortableCompanies); - pageContext.setAttribute("total", totalCompanies); - %> - - - - ${item.name} - ${item.companyId} - - - - - - - - - - - - Liferay.provide( - window, - 'associateCompanies', - function() { - var associateCompanyIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (associateCompanyIds && confirm("Are you sure you want to associate the selected company(ies) to ${selectedAssociation.name}?")) { - document.fm.associateCompanyIds.value = associateCompanyIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - -<% } //end if (operationOK != null && operationOK.compareTo("") != 0) { -else { -%> -<% if (operationFinished) { - out.println("Operation performed correctly."); -}%> -<% } %> \ No newline at end of file diff --git a/src/main/webapp/html/associationdashboard/association_dashboard.jsp b/src/main/webapp/html/associationdashboard/association_dashboard.jsp deleted file mode 100644 index 3759353..0000000 --- a/src/main/webapp/html/associationdashboard/association_dashboard.jsp +++ /dev/null @@ -1,62 +0,0 @@ -<%@include file="../init.jsp"%> -<% - GCubeTeam asso = (GCubeTeam) renderRequest.getAttribute("theAssociation"); - pageContext.setAttribute("theAssociation", asso); - String associationLogoURL = (String) renderRequest.getAttribute("associationLogoURL"); - pageContext.setAttribute("logoURL", associationLogoURL); - - LinkedHashMap> associationCompanies = (LinkedHashMap>) renderRequest - .getAttribute("associationCompanies"); - pageContext.setAttribute("associationCompanies", associationCompanies); -%> -
-
-
- - - -

${theAssociation.teamName}

-
-
-

${theAssociation.description}

-
-
-
- -
- - - - - - - -
${company.key.name}
-
- - - - - - - - - - - - - - - - - - -
Farm nameFarm locationLast form submitted
${farm.name}${farm.location}
- - -
-
\ No newline at end of file diff --git a/src/main/webapp/html/companyprivaterepository/company_private_repository.jsp b/src/main/webapp/html/companyprivaterepository/company_private_repository.jsp deleted file mode 100644 index 8b2b130..0000000 --- a/src/main/webapp/html/companyprivaterepository/company_private_repository.jsp +++ /dev/null @@ -1,125 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - LinkedHashMap> companyFiles = (LinkedHashMap>) renderRequest - .getAttribute("companyPrivateFiles"); - pageContext.setAttribute("companyFiles", companyFiles); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - GCubeTeam theCompany = (GCubeTeam) request.getAttribute("theCompany"); - pageContext.setAttribute("theCompanyName", theCompany.getTeamName()); - - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); -%> - - - - -
- - - - - - - -
-
-

${theCompanyName} - Private Repository Content

-
-
- - - -

The - repository is empty at the moment.

- - - -
- -

- Repository of - -

- - - - - - - - - - - - - - - - - <% - ExternalFile item = (ExternalFile) pageContext.getAttribute("file"); - String iconHTML = IconsManager.getMDIconTextualName(item.getName()).getHtml(); - String fullName = Utils.getUserByUsername(item.getLastUpdatedBy()).getFullname(); - String userProfileLink = Utils.getUserProfileLink(item.getLastUpdatedBy()); - Date lastUpdated = new Date(item.getLastModificationTime().getTimeInMillis()); - pageContext.setAttribute("lastUpdated", lastUpdated); - %> - - - - - - - - -
Sel.NameUploaded - byLast - Updated (UTC)
<%=iconHTML%>${file.name}<%=fullName%>
- - -

The - repository of ${farm.key.name} is empty at the moment.

- - -
- - - - - - -
-
- - -
- - - diff --git a/src/main/webapp/html/companyprivaterepository/show_all_versions.jsp b/src/main/webapp/html/companyprivaterepository/show_all_versions.jsp deleted file mode 100644 index e521da1..0000000 --- a/src/main/webapp/html/companyprivaterepository/show_all_versions.jsp +++ /dev/null @@ -1,92 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - String selectedItemId = (String) request.getAttribute("itemId"); - String selectedItemName = (String) request.getAttribute("itemName"); - pageContext.setAttribute("selectedItemName",selectedItemName); - pageContext.setAttribute("selectedItemId",selectedItemId); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - pageContext.setAttribute("currentURL",currentURL); - List fileVersions = (List) renderRequest.getAttribute("versions"); - if (fileVersions != null) - Collections.reverse(fileVersions); - pageContext.setAttribute("fileVersions", fileVersions); - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - PortletURL portletURL = renderResponse.createRenderURL(); - String iconHTML = IconsManager.getMDIconTextualName(selectedItemName).getHtml(); -%> - Back to Private Repository Content -

Available versions for: ${selectedItemName}

- - - - - - - - - - - - <% - WorkspaceVersion version = (WorkspaceVersion) pageContext.getAttribute("file"); - Date created = new Date(version.getCreated().getTimeInMillis()); - pageContext.setAttribute("created", created); - String fullName = ""; - String userProfileLink = ""; - if (version.getUser() != null) { - fullName = Utils.getUserByUsername(version.getUser()).getFullname(); - userProfileLink = Utils.getUserProfileLink(version.getUser()); - } - pageContext.setAttribute("fullName", fullName); - pageContext.setAttribute("userProfileLink", userProfileLink); - %> - - - - - - - - - - - - -
- Version NumberCreated by - Created date (UTC)Current
<%=iconHTML%>${file.name}<%=fullName%>${file.currentVersion}
- - - - - - Liferay.provide( - window, - 'associateCompanyUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (addUserIds && confirm("Are you sure you want to associate the selected users to this company?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/editcompanyusers/edit_admin_users.jsp b/src/main/webapp/html/editcompanyusers/edit_admin_users.jsp deleted file mode 100644 index d18b574..0000000 --- a/src/main/webapp/html/editcompanyusers/edit_admin_users.jsp +++ /dev/null @@ -1,107 +0,0 @@ -<%@page import="org.apache.tika.sax.ToTextContentHandler"%> -<%@include file="../init.jsp"%> - -

Administrators currently associated to <%= team.getName() %>:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = admins.size(); - List sortableUsers = ListUtil.subList(admins, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new CompanyMemberComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - (Farm Administrator) - - ${item.associatedFarmNames} ${FarmAdministrator} - - - - - - - <% - final String hrefFix = "location.href='" + removeFarmUsersURL .toString()+"'"; - %> - - - - - - - - - - - - - - Liferay.provide( - window, - 'removeAdministratorRoleFromUsers', - function() { - var removeUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - var array = removeUserIds.split(','); - var totalUsers = document.getElementById('totalUsers'); - - if (array.length == totalUsers.value) { - alert("Forbidden: You are trying removing the role from all the users of the company, at least one must have it.") - return; - } - if (removeUserIds && confirm("Are you sure you want to remove the Administrator role from the selected users?")) { - document.fm.removeUserIds.value = removeUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/editcompanyusers/edit_company_users.jsp b/src/main/webapp/html/editcompanyusers/edit_company_users.jsp deleted file mode 100644 index e20d51b..0000000 --- a/src/main/webapp/html/editcompanyusers/edit_company_users.jsp +++ /dev/null @@ -1,107 +0,0 @@ -<%@include file="../init.jsp"%> - -

- Users currently associated to - <%= team.getName() %>: -

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - -<%=currentGroupId %> - - - - - - - <% - int totalUsers = teamUsers.size(); - List sortableUsers = ListUtil.subList(teamUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new CompanyMemberComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - - - (Farm Administrator) - - ${item.associatedFarmNames} ${FarmAdministrator} - - - - - - - <% - final String hrefFix = "location.href='" + removeFarmUsersURL .toString()+"'"; - %> - - - - - - - - - - - - - - Liferay.provide( - window, - 'removeCompanUsers', - function() { - var removeUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (removeUserIds && confirm("Are you sure you want to remove the selected users from this company?")) { - document.fm.removeUserIds.value = removeUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/editfarmusers/edit_farm_users.jsp b/src/main/webapp/html/editfarmusers/edit_farm_users.jsp deleted file mode 100644 index 2cfa4c4..0000000 --- a/src/main/webapp/html/editfarmusers/edit_farm_users.jsp +++ /dev/null @@ -1,85 +0,0 @@ -<%@include file="../init.jsp"%> - -

Users currently associated to <%= farm.getName() %>:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = teamUsers.size(); - List sortableUsers = ListUtil.subList(teamUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - - Liferay.provide( - window, - 'removeFarmUsers', - function() { - var removeUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (removeUserIds && confirm("Are you sure you want to remove the selected users from this Farm?")) { - document.fm.removeUserIds.value = removeUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/editfarmusers/edit_farmadmin_users.jsp b/src/main/webapp/html/editfarmusers/edit_farmadmin_users.jsp deleted file mode 100644 index 7e1d2f8..0000000 --- a/src/main/webapp/html/editfarmusers/edit_farmadmin_users.jsp +++ /dev/null @@ -1,91 +0,0 @@ -<%@page import="org.apache.tika.sax.ToTextContentHandler"%> -<%@include file="../init.jsp"%> - -

Administrators currently associated to <%= theFarm.getName() %>:

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = admins.size(); - List sortableUsers = ListUtil.subList(admins, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - - Liferay.provide( - window, - 'removeAdministratorRoleFromUsers', - function() { - var removeUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - var array = removeUserIds.split(','); - var totalUsers = document.getElementById('totalUsers'); - - if (array.length == totalUsers.value) { - alert("Forbidden: You are trying removing the role from all the users of the company, at least one must have it.") - return; - } - if (removeUserIds && confirm("Are you sure you want to remove the Administrator role from the selected users?")) { - document.fm.removeUserIds.value = removeUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/emptyformsdocumentsdisplay/empty_forms_config.jsp b/src/main/webapp/html/emptyformsdocumentsdisplay/empty_forms_config.jsp deleted file mode 100644 index 7193f56..0000000 --- a/src/main/webapp/html/emptyformsdocumentsdisplay/empty_forms_config.jsp +++ /dev/null @@ -1,47 +0,0 @@ -<%@include file="../init.jsp"%> -<%@ page import="com.liferay.portal.kernel.util.Constants"%> -<%@ page import="org.gcube.portlets.user.performfish.EmptyFormsDocumentsDisplay"%> - - - -

Here you should enter the FolderId of the shared folder where the documents are located and whether it shows - Hatchery, Pre-ongrowing or Grow out documents.

-<% - String selectedPhase = GetterUtil.getString(portletPreferences.getValue(PFISHConstants.PHASE_PREFERENCE_ATTR_NAME, StringPool.BLANK)); - - String folderId = GetterUtil.getString(portletPreferences.getValue(EmptyFormsDocumentsDisplay.FOLDERID_PREFERENCE_ATTR_NAME, StringPool.BLANK)); - - pageContext.setAttribute("SHOW_HATCHERY", PFISHConstants.SHOW_HATCHERY); - pageContext.setAttribute("SHOW_PRE_ONGROWING", PFISHConstants.SHOW_PRE_ONGROWING); - pageContext.setAttribute("SHOW_GROW_OUT", PFISHConstants.SHOW_GROW_OUT); -%> - - - - - - - - - - - \ No newline at end of file diff --git a/src/main/webapp/html/emptyformsdocumentsdisplay/empty_forms_fileupload_display.jsp b/src/main/webapp/html/emptyformsdocumentsdisplay/empty_forms_fileupload_display.jsp deleted file mode 100644 index 84b8394..0000000 --- a/src/main/webapp/html/emptyformsdocumentsdisplay/empty_forms_fileupload_display.jsp +++ /dev/null @@ -1,146 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - List theSheets = (List) renderRequest.getAttribute("thefiles"); - List theSheetNames = (List) renderRequest.getAttribute("theSheetNames"); - pageContext.setAttribute("theSheetNames", theSheetNames); - pageContext.setAttribute("theSheets", theSheets); - List theInstructions = (List) renderRequest.getAttribute("theInstructions"); - pageContext.setAttribute("theInstructions", theInstructions); - String selectedPhase = GetterUtil.getString(portletPreferences.getValue(PFISHConstants.PHASE_PREFERENCE_ATTR_NAME, StringPool.BLANK)); - pageContext.setAttribute("selectedPhase", selectedPhase); - GCubeTeam theFarm = (GCubeTeam) request.getAttribute("theFarm"); - pageContext.setAttribute("theFarm", theFarm); -%> - -
-
-
-

Empty - forms (Click on the file names to download)

- - -

The - empty forms repository is empty at the moment. Please contact the - Managers

- - - - - - - - - - <% - WorkspaceItem item = (WorkspaceItem) pageContext.getAttribute("file"); - String iconHTML = IconsManager.getMDIconTextualName(item.getName()).getHtml(); - %> - - - - - - -
<%=iconHTML%>${file.name}Download
- - -
-
-

Instructions:

- - -

There - are no instructions at the moment. Please contact the Managers

- - - - - - - - - - <% - WorkspaceItem item = (WorkspaceItem) pageContext.getAttribute("file"); - String iconHTML = IconsManager.getMDIconTextualName(item.getName()).getHtml(); - %> - - - - - - -
<%=iconHTML%>${file.name}Download
- - -
-
-
- - - - -
Select file to attach
-
Note: - files having different name from the original will not be accepted for submission.
- - - -
-
- \ No newline at end of file diff --git a/src/main/webapp/html/error_pages/NotACompanyAdmin.jsp b/src/main/webapp/html/error_pages/NotACompanyAdmin.jsp deleted file mode 100644 index fa9c957..0000000 --- a/src/main/webapp/html/error_pages/NotACompanyAdmin.jsp +++ /dev/null @@ -1,8 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

You are not authorised

- It seems you don't have the permission to use this application. You must be an Administrator of this company to use this application. -
diff --git a/src/main/webapp/html/error_pages/NotAFarmAdmin.jsp b/src/main/webapp/html/error_pages/NotAFarmAdmin.jsp deleted file mode 100644 index 0fecb32..0000000 --- a/src/main/webapp/html/error_pages/NotAFarmAdmin.jsp +++ /dev/null @@ -1,8 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

You are not authorised

- It seems you don't have the permission to use this application. You must be an Administrator of this farm to use this application. -
diff --git a/src/main/webapp/html/error_pages/NotBelongingToAnyAssociation.jsp b/src/main/webapp/html/error_pages/NotBelongingToAnyAssociation.jsp deleted file mode 100644 index 49ee11f..0000000 --- a/src/main/webapp/html/error_pages/NotBelongingToAnyAssociation.jsp +++ /dev/null @@ -1,8 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

You are not authorised

- It seems you don't have the permission to use this application. You must belong to one association to use this application. -
diff --git a/src/main/webapp/html/error_pages/NotBelongingToAnyCompany.jsp b/src/main/webapp/html/error_pages/NotBelongingToAnyCompany.jsp deleted file mode 100644 index d243f8e..0000000 --- a/src/main/webapp/html/error_pages/NotBelongingToAnyCompany.jsp +++ /dev/null @@ -1,8 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

You are not authorised

- It seems you don't have the permission to use this application. You must belong to one company to use this application. -
diff --git a/src/main/webapp/html/error_pages/NotBelongingToAnyFarm.jsp b/src/main/webapp/html/error_pages/NotBelongingToAnyFarm.jsp deleted file mode 100644 index 0e0516a..0000000 --- a/src/main/webapp/html/error_pages/NotBelongingToAnyFarm.jsp +++ /dev/null @@ -1,8 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

You are not authorised

- It seems you don't have the permission to use this application. You are not associated to any farm of the company. -
diff --git a/src/main/webapp/html/error_pages/TooManyBelongingAssociation.jsp b/src/main/webapp/html/error_pages/TooManyBelongingAssociation.jsp deleted file mode 100644 index 1b9f32d..0000000 --- a/src/main/webapp/html/error_pages/TooManyBelongingAssociation.jsp +++ /dev/null @@ -1,9 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

Please select the farm you wish to operate

- You are assigned to more than one company - Farm. You can work on one farm at a time. -
\ No newline at end of file diff --git a/src/main/webapp/html/error_pages/TooManyBelongingCompany.jsp b/src/main/webapp/html/error_pages/TooManyBelongingCompany.jsp deleted file mode 100644 index 422b30a..0000000 --- a/src/main/webapp/html/error_pages/TooManyBelongingCompany.jsp +++ /dev/null @@ -1,8 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

There is an issue in your autorisations

- It seems you belong to more than one company. You must belong to one company only to use this application. -
diff --git a/src/main/webapp/html/error_pages/TooManyBelongingFarm.jsp b/src/main/webapp/html/error_pages/TooManyBelongingFarm.jsp deleted file mode 100644 index 1b9f32d..0000000 --- a/src/main/webapp/html/error_pages/TooManyBelongingFarm.jsp +++ /dev/null @@ -1,9 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> - - - -
-

Please select the farm you wish to operate

- You are assigned to more than one company - Farm. You can work on one farm at a time. -
\ No newline at end of file diff --git a/src/main/webapp/html/error_pages/farmname_exists_already.jsp b/src/main/webapp/html/error_pages/farmname_exists_already.jsp deleted file mode 100644 index 7da9e86..0000000 --- a/src/main/webapp/html/error_pages/farmname_exists_already.jsp +++ /dev/null @@ -1,29 +0,0 @@ -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet"%> -<%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%> -<%@ taglib uri="http://liferay.com/tld/aui" prefix="aui"%> -<%@ taglib uri="http://liferay.com/tld/ui" prefix="liferay-ui"%> -<%@ taglib uri="http://liferay.com/tld/theme" prefix="liferay-theme"%> -<%@page import="com.liferay.portal.kernel.portlet.LiferayWindowState"%> -<%@page import="com.liferay.portal.kernel.servlet.SessionErrors"%> -<%@page import="com.liferay.portal.kernel.servlet.SessionMessages"%> -<%@page import="com.liferay.portal.model.User"%> -<%@page import="com.liferay.portal.kernel.util.WebKeys"%> - - - -<% -User currentUser = (User) request.getAttribute(WebKeys.USER); -%> - - - -

- We're sorry - <%=currentUser.getFirstName()%>. There was an error performing this operation. A Farm with the entered name may exists already, please choose antoher name or request support at https://support.d4science.org -

- - - Close -
-<%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%> -<%@ taglib uri="http://liferay.com/tld/aui" prefix="aui"%> -<%@ taglib uri="http://liferay.com/tld/ui" prefix="liferay-ui"%> -<%@ taglib uri="http://liferay.com/tld/theme" prefix="liferay-theme"%> -<%@page import="com.liferay.portal.kernel.portlet.LiferayWindowState"%> -<%@page import="com.liferay.portal.kernel.servlet.SessionErrors"%> -<%@page import="com.liferay.portal.kernel.servlet.SessionMessages"%> -<%@page import="com.liferay.portal.model.User"%> -<%@page import="com.liferay.portal.kernel.util.WebKeys"%> - - - -<% -User currentUser = (User) request.getAttribute(WebKeys.USER); -%> - - - -

- We're sorry - <%=currentUser.getFirstName()%>. There was an error performing this operation. Try again, if the error occurs again please report this issue to https://support.d4science.org -

- - - Close -
-<%@include file="../init.jsp"%> - -<% - List theFarms = (List) request.getAttribute("theFarms"); - pageContext.setAttribute("theFarms", theFarms); -%> - -
- - - - - - - - - <% - GCubeTeam theFarm = (GCubeTeam) pageContext.getAttribute("farm"); - String encodedFarmId = Utils.maskId(theFarm.getTeamId()); - pageContext.setAttribute("encodedFarmId", encodedFarmId); - %> - - - - - - - - -
SelectFarm - NameCreation - Date (UTC)
${farm.teamName}
-
\ No newline at end of file diff --git a/src/main/webapp/html/farmrepository/config.jsp b/src/main/webapp/html/farmrepository/config.jsp deleted file mode 100644 index 6b55dac..0000000 --- a/src/main/webapp/html/farmrepository/config.jsp +++ /dev/null @@ -1,27 +0,0 @@ -<%@include file="../init.jsp"%> -<%@ page import="com.liferay.portal.kernel.util.Constants" %> - - - -

Here you can customise the documents (whether - Hatchery, Pre-ongrowing, Grow out or all three) this portlet will have - to show.

-<% - String selectedPhase = GetterUtil.getString(portletPreferences.getValue("phase", StringPool.BLANK)); - - pageContext.setAttribute("SHOW_ALL_PHASES", PFISHConstants.SHOW_ALL_PHASES); - pageContext.setAttribute("SHOW_HATCHERY", PFISHConstants.SHOW_HATCHERY); - pageContext.setAttribute("SHOW_PRE_ONGROWING", PFISHConstants.SHOW_PRE_ONGROWING); - pageContext.setAttribute("SHOW_GROW_OUT", PFISHConstants.SHOW_GROW_OUT); -%> - - - - - - - - - \ No newline at end of file diff --git a/src/main/webapp/html/farmrepository/show_all_versions.jsp b/src/main/webapp/html/farmrepository/show_all_versions.jsp deleted file mode 100644 index a84c309..0000000 --- a/src/main/webapp/html/farmrepository/show_all_versions.jsp +++ /dev/null @@ -1,89 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - String selectedItemId = (String) request.getAttribute("itemId"); - String selectedItemName = (String) request.getAttribute("itemName"); - pageContext.setAttribute("selectedItemName",selectedItemName); - pageContext.setAttribute("selectedItemId",selectedItemId); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - pageContext.setAttribute("currentURL",currentURL); - List fileVersions = (List) renderRequest.getAttribute("versions"); - if (fileVersions != null) - Collections.reverse(fileVersions); - pageContext.setAttribute("fileVersions", fileVersions); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - String iconHTML = IconsManager.getMDIconTextualName(selectedItemName).getHtml(); -%> - Back to Private Repository Content -

Available versions for: ${selectedItemName}

- - - - - - - - - - - - <% - WorkspaceVersion version = (WorkspaceVersion) pageContext.getAttribute("file"); - Date created = new Date(version.getCreated().getTimeInMillis()); - pageContext.setAttribute("created", created); - String fullName = ""; - String userProfileLink = ""; - if (version.getUser() != null) { - fullName = Utils.getUserByUsername(version.getUser()).getFullname(); - userProfileLink = Utils.getUserProfileLink(version.getUser()); - } - pageContext.setAttribute("fullName", fullName); - pageContext.setAttribute("userProfileLink", userProfileLink); - %> - - - - - - - - - - - - -
- Version NumberCreated by - Created date (UTC)Current
<%=iconHTML%>${file.name}<%=fullName%>${file.currentVersion}
- - - - - - Liferay.provide( - window, - 'associateCompanyUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (addUserIds && confirm("Are you sure you want to associate the selected users to this company?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/farmrepository/view_farm_repository.jsp b/src/main/webapp/html/farmrepository/view_farm_repository.jsp deleted file mode 100644 index 4acba56..0000000 --- a/src/main/webapp/html/farmrepository/view_farm_repository.jsp +++ /dev/null @@ -1,232 +0,0 @@ -<%@include file="../init.jsp"%> - - -<% - List submittedFormsWithPublishStatus = (List) renderRequest.getAttribute("submittedFormsWithPublishStatus"); - pageContext.setAttribute("submittedFormsWithPublishStatus", submittedFormsWithPublishStatus); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - GCubeTeam theCompany = (GCubeTeam) request.getAttribute("theCompany"); - pageContext.setAttribute("theCompanyName", theCompany.getTeamName()); - GCubeTeam theFarm = (GCubeTeam) request.getAttribute("theFarm"); - if (theFarm != null) { - pageContext.setAttribute("farmyName", theFarm.getTeamName()); - pageContext.setAttribute("farmId", theFarm.getTeamId()); - } - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - pageContext.setAttribute("AnalyticalToolkitPortletEndpoint", Utils.ANALYTICAL_TOOLKIT_PORTLET_ENDPOINT); - pageContext.setAttribute("farmIdParamEncoded", Utils.maskId("farmid")); - pageContext.setAttribute("batchTypeParamEncoded", Utils.maskId("batchtype")); -%> - - - - - - - -
- - - - - - - -
-
-

${theCompanyName} - ${farmyName} Private Repository Content

-
-
- - - -

The - repository is empty at the moment. You can submit files via the dedicated pages in the VRE (Hatchery, Pre-ongrowing and Grow out)

- - -
- - - - - - - - - - - - - <% - SubmittedForm submittedForm = (SubmittedForm) pageContext.getAttribute("form"); - ExternalFile item = submittedForm.getFormFile(); - String iconHTML = IconsManager.getMDIconTextualName(item.getName()).getHtml(); - String fullName = Utils.getUserByUsername(item.getLastUpdatedBy()).getFullname(); - String userProfileLink = Utils.getUserProfileLink(item.getLastUpdatedBy()); - Date lastUpdated = new Date(item.getLastModificationTime().getTimeInMillis()); - pageContext.setAttribute("lastUpdated", lastUpdated); - String fullNamePublisher = SubmittedForm.NOT_YET_PUBLISHER; - String userProfileLinkPublisher = ""; - pageContext.setAttribute("rowBgColor", "#FFF"); - pageContext.setAttribute("buttonCheckProgressStyle", "display: none;"); - - pageContext.setAttribute("farmIdEncoded", Utils.maskId(theFarm.getTeamId())); - pageContext.setAttribute("batchTypeEncoded", Utils.maskId(submittedForm.getBatchType())); - if (submittedForm.getSubmitterIdentity() != null) { - fullNamePublisher = Utils.getUserByUsername(submittedForm.getSubmitterIdentity()).getFullname(); - pageContext.setAttribute("fullNamePublisher", fullNamePublisher); - userProfileLinkPublisher = Utils.getUserProfileLink(submittedForm.getSubmitterIdentity()); - if (submittedForm.getEndTimeinMillis() != PublishAnonymisedJob.EPOCH_TIME_JOB_NOTFINISHED*1000) { - Date jobEndTime = new Date(submittedForm.getEndTimeinMillis()); - pageContext.setAttribute("jobEndTime", jobEndTime); - } - else { - pageContext.setAttribute("jobEndTime", ""); - pageContext.setAttribute("fullNamePublisher", ""); - pageContext.setAttribute("rowBgColor", "rgb(228, 223, 0)"); - pageContext.setAttribute("buttonCheckProgressStyle", "display: visible;"); - } - } else { - pageContext.setAttribute("fullNamePublisher", ""); //reset the field - pageContext.setAttribute("jobEndTime", "");//reset the field - } - %> - - - - - - - - - - - - - - -
Sel.NameUploaded - by (UTC)Published by (UTC)Publishing Status
<%=iconHTML%>${form.formFile.name}
 -
- 		${form.status} - - - - - - -
- -
- - - -
-
- - - - - - - - -
-
- - -
- - - - - diff --git a/src/main/webapp/html/init.jsp b/src/main/webapp/html/init.jsp deleted file mode 100644 index 829655e..0000000 --- a/src/main/webapp/html/init.jsp +++ /dev/null @@ -1,76 +0,0 @@ -<%@page import="com.liferay.portal.model.Layout"%> -<%@ taglib uri="http://java.sun.com/portlet_2_0" prefix="portlet" %> -<%@ taglib prefix="c" uri="http://java.sun.com/jsp/jstl/core"%> -<%@ taglib prefix="fmt" uri="http://java.sun.com/jsp/jstl/fmt" %> - -<%@ taglib uri="http://alloy.liferay.com/tld/aui" prefix="aui" %> -<%@ taglib uri="http://liferay.com/tld/portlet" prefix="liferay-portlet" %> -<%@ taglib uri="http://liferay.com/tld/security" prefix="liferay-security" %> -<%@ taglib uri="http://liferay.com/tld/theme" prefix="liferay-theme" %> -<%@ taglib uri="http://liferay.com/tld/ui" prefix="liferay-ui" %> -<%@ taglib uri="http://liferay.com/tld/util" prefix="liferay-util" %> - -<%@page import="com.liferay.util.portlet.PortletRequestUtil"%> -<%@page import="com.liferay.portal.kernel.servlet.SessionErrors"%> -<%@ page import="com.liferay.portal.util.PortalUtil" %> -<%@ page import="com.liferay.portal.kernel.util.StringUtil" %> -<%@ page import="com.liferay.portal.kernel.util.Validator"%> -<%@ page import="com.liferay.portal.kernel.util.StringPool" %> -<%@ page import="com.liferay.portal.kernel.util.HtmlUtil" %> -<%@ page import="com.liferay.portal.kernel.util.ParamUtil" %> -<%@ page import="com.liferay.portal.kernel.util.ListUtil" %> -<%@ page import="com.liferay.portal.kernel.util.Validator" %> -<%@ page import="com.liferay.portal.kernel.util.WebKeys" %> -<%@ page import="com.liferay.portal.kernel.bean.BeanParamUtil" %> -<%@ page import="com.liferay.portal.kernel.language.LanguageUtil"%> -<%@page import="com.liferay.portal.kernel.util.GetterUtil"%> -<%@ page import="com.liferay.portal.service.permission.PortalPermissionUtil" %> -<%@ page import="com.liferay.portal.service.permission.PortletPermissionUtil" %> -<%@ page import="com.liferay.portal.kernel.portlet.LiferayWindowState"%> -<%@ page import="com.liferay.portal.kernel.portlet.LiferayPortletMode"%> -<%@ page import="javax.portlet.PortletURL" %> -<%@ page import="java.util.List" %> -<%@ page import="java.net.URLEncoder" %> -<%@ page import="java.util.ArrayList" %> -<%@ page import="java.util.Map" %> -<%@ page import="java.util.LinkedHashMap" %> -<%@page import="com.liferay.portal.kernel.dao.search.RowChecker"%> -<%@ page import="java.util.Calendar" %> -<%@ page import="java.util.Collections" %> -<%@page import="java.util.Date"%> -<%@page import="java.util.Base64"%> -<%@ page import="java.text.SimpleDateFormat"%> -<%@ page import="java.text.DateFormat"%> -<%@page import="com.liferay.portal.kernel.workflow.WorkflowConstants"%> -<%@page import="com.liferay.portlet.journal.model.JournalArticle"%> -<%@page import="com.liferay.portlet.dynamicdatamapping.model.DDMTemplate"%> -<%@page import="com.liferay.portlet.dynamicdatamapping.model.DDMStructure"%> -<%@page import="com.liferay.portal.security.permission.ActionKeys"%> -<%@page import="javax.portlet.PortletSession"%> -<%@page import="org.gcube.vomanagement.usermanagement.model.GCubeUser"%> -<%@page import="org.gcube.vomanagement.usermanagement.model.GCubeTeam"%> -<%@page import="com.liferay.portal.model.Team"%> -<%@page import="com.liferay.portal.model.Group"%> -<%@page import="com.liferay.portal.service.UserLocalServiceUtil"%> -<%@page import="com.liferay.portal.service.GroupLocalServiceUtil"%> -<%@page import="org.gcube.portlets.user.performfish.util.comparators.*"%> -<%@page import="org.gcube.portlets.user.performfish.util.*"%> -<%@page import="org.gcube.portlets.user.performfish.util.db.DBUtil"%> -<%@page import="org.gcube.portlets.user.performfish.util.PFISHConstants"%> -<%@page import=" org.gcube.portlets.user.performfish.bean.*"%> -<%@page import="org.gcube.common.homelibrary.home.workspace.WorkspaceItem"%> -<%@page import="org.gcube.common.homelibary.model.versioning.WorkspaceVersion"%> -<%@page import="org.gcube.common.homelibrary.home.workspace.folder.items.ExternalFile"%> -<%@page import="org.gcube.portal.stohubicons.IconsManager"%> -<%@page import="org.gcube.common.storagehub.model.items.GenericFileItem"%> - - - - - - - - - - - \ No newline at end of file diff --git a/src/main/webapp/html/manageassociations/edit_associations.jsp b/src/main/webapp/html/manageassociations/edit_associations.jsp deleted file mode 100644 index 72d1d1b..0000000 --- a/src/main/webapp/html/manageassociations/edit_associations.jsp +++ /dev/null @@ -1,81 +0,0 @@ -<%@include file="../init.jsp"%> - -

- Current associations in - <%=vreName%>: -

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalAssociations = associations.size(); - List sortableAssociations = ListUtil.subList(associations, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableAssociations, new AssociationComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableAssociations); - } - pageContext.setAttribute("results", sortableAssociations); - pageContext.setAttribute("total", totalAssociations); - %> - - - - ${item.shortName} - ${item.associationId} - - - - - - - - - Liferay.provide( - window, - 'removeCompanies', - function() { - var removeCompanyIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (removeCompanyIds && confirm("Are you sure you want to remove the selected company(ies)?" + - "This action will remove also all the Farms and the Members associated to the company")) { - document.fm.removeCompanyIds.value = removeCompanyIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/manageassociations/manage_associations_view.jsp b/src/main/webapp/html/manageassociations/manage_associations_view.jsp deleted file mode 100644 index 74ffae0..0000000 --- a/src/main/webapp/html/manageassociations/manage_associations_view.jsp +++ /dev/null @@ -1,107 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - LinkedHashMap> associationCompanies = (LinkedHashMap>) renderRequest - .getAttribute("associationCompanies"); - pageContext.setAttribute("associationCompanies", associationCompanies); - List associations = (List) renderRequest.getAttribute("associations"); - pageContext.setAttribute("associations", associations); - String vreName = (String) renderRequest.getAttribute("vreName"); - pageContext.setAttribute("vreName", vreName); - RowChecker rowChecker = new RowChecker(renderResponse); - String portletURLString = PortalUtil.getCurrentURL(request); - String currentGroupId = PortalUtil.getScopeGroupId(request) + ""; -%> - - - - - - - - - - - -
- -
- - - - - - - - - - -
Association:${association.key.shortName}(${association.key.associationId})
-
- - - - - - - - - - -
${company.name}(${company.companyId})
- - - - -
- - -  Back to Control Centre - - - <%@include file="/html/manageassociations/edit_associations.jsp"%> - - - - diff --git a/src/main/webapp/html/managecompanies/edit_companies.jsp b/src/main/webapp/html/managecompanies/edit_companies.jsp deleted file mode 100644 index c5630d5..0000000 --- a/src/main/webapp/html/managecompanies/edit_companies.jsp +++ /dev/null @@ -1,86 +0,0 @@ -<%@include file="../init.jsp"%> - -

- Registered companies in - <%=vreName%>: -

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalCompanies = companies.size(); - List sortableCompanies = ListUtil.subList(companies, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableCompanies, new CompanyComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableCompanies); - } - pageContext.setAttribute("results", sortableCompanies); - pageContext.setAttribute("total", totalCompanies); - %> - - - - ${item.name} - ${item.companyId} - - - - - - - - - - - Liferay.provide( - window, - 'removeCompanies', - function() { - var removeCompanyIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - - if (removeCompanyIds && confirm("Are you sure you want to remove the selected company(ies)?" + - "This action will remove also all the Farms and the Members associated to the company")) { - document.fm.removeCompanyIds.value = removeCompanyIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - \ No newline at end of file diff --git a/src/main/webapp/html/managecompanies/manage_companies.jsp b/src/main/webapp/html/managecompanies/manage_companies.jsp deleted file mode 100644 index 149c33f..0000000 --- a/src/main/webapp/html/managecompanies/manage_companies.jsp +++ /dev/null @@ -1,84 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - List companies = (List ) renderRequest.getAttribute("companies"); - pageContext.setAttribute("companies", companies); - String vreName = (String) renderRequest.getAttribute("vreName"); - pageContext.setAttribute("vreName", vreName); - RowChecker rowChecker = new RowChecker(renderResponse); - String portletURLString = PortalUtil.getCurrentURL(request); - String currentGroupId = PortalUtil.getScopeGroupId(request)+""; -%> - - - - - - - - - - -
- - - - - - - - - - -
${company.name}(${company.companyId})
- -
- - -  Back to Control Centre - - - <%@include file="/html/managecompanies/edit_companies.jsp"%> - - - - diff --git a/src/main/webapp/html/managecompanyadmins/company_admins.jsp b/src/main/webapp/html/managecompanyadmins/company_admins.jsp deleted file mode 100644 index 1babb96..0000000 --- a/src/main/webapp/html/managecompanyadmins/company_admins.jsp +++ /dev/null @@ -1,78 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - List admins = (List) renderRequest.getAttribute("companyAdmins"); - pageContext.setAttribute("adminMembers", admins); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team team = (Team) request.getAttribute("theTeam"); - pageContext.setAttribute("companyName", team.getName()); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - pageContext.setAttribute("currentGroupId", currentGroupId); - String currentURL = PortalUtil.getCurrentURL(request); -%> - - - - - -
- - - - - - - - -
-
-

${companyName} - Administrators

-
- - -
- - - - - - <% - CompanyMember theUser = (CompanyMember) pageContext.getAttribute("member"); - String userProfileLink = Utils.getUserProfileLink(theUser.getUsername()); - %> - - - - - -
${member.fullname}
- - - -  Back to Dashboard - -  Promote New Administrators - - <%@include file="/html/editcompanyusers/edit_admin_users.jsp"%> - - - - diff --git a/src/main/webapp/html/managecompanyusers/company_users.jsp b/src/main/webapp/html/managecompanyusers/company_users.jsp deleted file mode 100644 index ebc69ed..0000000 --- a/src/main/webapp/html/managecompanyusers/company_users.jsp +++ /dev/null @@ -1,78 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - List members = (List) renderRequest.getAttribute("companyMembers"); - pageContext.setAttribute("companyMembers", members); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team team = (Team) request.getAttribute("theTeam"); - pageContext.setAttribute("companyName", team.getName()); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List teamUsers = members; -%> - - - - - -
- - - - - - - -
-
-

${companyName} - Users

-
- - -
- - - - <% - CompanyMember theUser = (CompanyMember) pageContext.getAttribute("member"); - String userProfileLink = Utils.getUserProfileLink(theUser.getUsername()); - %> - - - - - - -
${member.fullname}
- -
- - -  Back to Dashboard -  Associate new users to the - Company - - <%@include file="/html/editcompanyusers/edit_company_users.jsp"%> - - - - diff --git a/src/main/webapp/html/managefarmadministratos/farm_admins.jsp b/src/main/webapp/html/managefarmadministratos/farm_admins.jsp deleted file mode 100644 index 3e5398f..0000000 --- a/src/main/webapp/html/managefarmadministratos/farm_admins.jsp +++ /dev/null @@ -1,95 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - Boolean isCompanyAdministrator = false; - isCompanyAdministrator = (Boolean) renderRequest.getAttribute("isCompanyAdministrator"); - pageContext.setAttribute("isCompanyAdministrator", isCompanyAdministrator); - List admins = (List) renderRequest.getAttribute("farmAdmins"); - pageContext.setAttribute("adminMembers", admins); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - GCubeTeam theCompany = (GCubeTeam) request.getAttribute("theCompany"); - pageContext.setAttribute("theCompanyName", theCompany.getTeamName()); - - Team theFarm = (Team) request.getAttribute("theFarm"); - pageContext.setAttribute("farmName", theFarm.getName()); - pageContext.setAttribute("theFarmId", theFarm.getTeamId()); - - long currentGroupId = PortalUtil.getScopeGroupId(request); - String currentURL = PortalUtil.getCurrentURL(request); -%> - - - - - -
- - - - - - - - -
-
-

${theCompanyName} - ${farmName} - Administrators

-
- - -
- - - - - - <% - GCubeUser theUser = (GCubeUser) pageContext.getAttribute("member"); - String userProfileLink = Utils.getUserProfileLink(theUser.getUsername()); - %> - - - - - - -
${member.fullname}
- - - -  Back to Dashboard - <% - String encodedFarmId = Utils.maskId(theFarm.getTeamId()); - pageContext.setAttribute("encodedFarmId", encodedFarmId);%> -  Promote New Farm Administrators - - <%@include file="/html/editfarmusers/edit_farmadmin_users.jsp"%> - - - - diff --git a/src/main/webapp/html/managefarms/managefarms_view.jsp b/src/main/webapp/html/managefarms/managefarms_view.jsp deleted file mode 100644 index 957611f..0000000 --- a/src/main/webapp/html/managefarms/managefarms_view.jsp +++ /dev/null @@ -1,226 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - List farms = (List) renderRequest.getAttribute("farms"); - pageContext.setAttribute("farms", farms); - GCubeTeam theCompany = (GCubeTeam) renderRequest.getAttribute("company"); - pageContext.setAttribute("theCompany", theCompany); - RowChecker rowChecker = new RowChecker(renderResponse); - String portletURLString = PortalUtil.getCurrentURL(request); - String currentGroupId = PortalUtil.getScopeGroupId(request) + ""; - String fullName = PortalUtil.getUser(request).getFullName(); - pageContext.setAttribute("theCreator", fullName); -%> - - - - - - - - - - - - - - -Liferay.provide( - window, - 'closePopup', - function(dialogId) { - var dialog = Liferay.Util.getWindow(dialogId); - Liferay.fire('closeWindow', { - id:'dialog' - }); - var theURLToLoad = window.location.protocol + "//" + window.location.host + "/" + window.location.pathname; - window.location.href = theURLToLoad; - },['aui-base','liferay-util-window'] -); - -
- - - - - - - - - - - - - <% - Farm theFarm = (Farm) pageContext.getAttribute("farm"); - if (theFarm.getAdministrators() == null || theFarm.getAdministrators().isEmpty()) - pageContext.setAttribute("admins", "Missing! Assign one"); - else { - String adminsToString = ""; - int i = 1; - for (GCubeUser admin : theFarm.getAdministrators()) { - adminsToString += admin.getFullname(); - if (i < theFarm.getAdministrators().size()) - adminsToString += ", "; - i++; - } - pageContext.setAttribute("admins", adminsToString); - } - %> - - - - - - - - - - - -
Sel.NameLocation - Created - by Created (UTC)Administrator(s)
${farm.name}${farm.location}${farm.creatorFullname}${admins}
-
- - - -<%-- --%> -<%-- --%> -<%-- --%> -<%-- --%> - - - -
- - - -
- - - diff --git a/src/main/webapp/html/managefarmusers/manage_farm_users_view.jsp b/src/main/webapp/html/managefarmusers/manage_farm_users_view.jsp deleted file mode 100644 index 6ec7abb..0000000 --- a/src/main/webapp/html/managefarmusers/manage_farm_users_view.jsp +++ /dev/null @@ -1,81 +0,0 @@ -<%@include file="../init.jsp"%> - -<% - List members = (List) renderRequest.getAttribute("farmMembers"); - pageContext.setAttribute("farmMembers", members); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team farm = (Team) request.getAttribute("theFarm"); - pageContext.setAttribute("farmName", farm.getName()); - pageContext.setAttribute("theFarmId", farm.getTeamId()); - GCubeTeam theCompany = (GCubeTeam) request.getAttribute("theCompany"); - pageContext.setAttribute("theCompanyName", theCompany.getTeamName()); - - long currentGroupId = PortalUtil.getScopeGroupId(request); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List teamUsers = members; -%> - - - - - -
- - - - - - - -
-
-

${theCompanyName} - ${farmName} Users

-
- - -
- - - - <% - GCubeUser theUser = (GCubeUser) pageContext.getAttribute("member"); - String userProfileLink = Utils.getUserProfileLink(theUser.getUsername()); - %> - - - - - - -
${member.fullname}
- -
- - -  Back to Dashboard - <% - String encodedFarmId = Utils.maskId(farm.getTeamId()); - pageContext.setAttribute("encodedFarmId", encodedFarmId);%> -  Associate new users to the - Farm - - <%@include file="/html/editfarmusers/edit_farm_users.jsp"%> - - - - diff --git a/src/main/webapp/html/setcompanyadministratorssuperuser/set_company_admin.jsp b/src/main/webapp/html/setcompanyadministratorssuperuser/set_company_admin.jsp deleted file mode 100644 index 6830ccd..0000000 --- a/src/main/webapp/html/setcompanyadministratorssuperuser/set_company_admin.jsp +++ /dev/null @@ -1,136 +0,0 @@ -<%@include file="../init.jsp"%> -<% - Boolean operationFinished = (Boolean) request.getAttribute("operationFinished"); - // - -if (!operationFinished) { - - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team team = (Team) request.getAttribute("theTeam"); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List siteUsers = (List) request.getAttribute("availableUsers"); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - pageContext.setAttribute("companyName", team.getName()); -%> - - -
- - - - - - - - -
-
-

${companyName} -

-
-

- Users currently associated to - <%=group.getName()%> - that can be set as Company Administrators (They do not belong to any - other company yet): -

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - - - <% - int totalUsers = siteUsers.size(); - List sortableUsers = ListUtil.subList(siteUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new org.gcube.portlets.user.performfish.util.comparators.UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - - - - - - - - - - Liferay.provide( - window, - 'promoteAdminUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - if (addUserIds && confirm("Are you sure you want to promote ${companyName} Administrator the selected user(s)?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - -<% } //enf if (operationOK != null && operationOK.compareTo("") != 0) { -else { -%> -<% if (operationFinished) { - out.println("Company admin(s) set correctly."); -}%> -<% } %> \ No newline at end of file diff --git a/src/main/webapp/html/setfarmadministrators/set_farm_admin.jsp b/src/main/webapp/html/setfarmadministrators/set_farm_admin.jsp deleted file mode 100644 index 122829f..0000000 --- a/src/main/webapp/html/setfarmadministrators/set_farm_admin.jsp +++ /dev/null @@ -1,142 +0,0 @@ -<%@include file="../init.jsp"%> -<%@page import="com.liferay.portal.kernel.portlet.LiferayWindowState"%> -<% - Boolean operationFinished = (Boolean) request.getAttribute("operationFinished"); - // - -if (!operationFinished) { - - String portletURLString = PortalUtil.getCurrentURL(request); - RowChecker rowChecker = new RowChecker(renderResponse); - String currentUsername = Utils.getCurrentUser(request).getUsername(); - Team theCompany = (Team) request.getAttribute("theCompany"); - Team theFarm = (Team) request.getAttribute("theFarm"); - Group group = (Group) GroupLocalServiceUtil.getGroup(PortalUtil.getScopeGroupId(request)); - long currentGroupId = group.getGroupId(); - String currentURL = PortalUtil.getCurrentURL(request); - //this is the list to be working on manage - List siteUsers = (List) request.getAttribute("availableUsers"); - pageContext.setAttribute("logoURL", renderRequest.getAttribute("companyLogoURL")); - pageContext.setAttribute("companyName", theCompany.getName()); - pageContext.setAttribute("farmName", theFarm.getName()); -%> - - -
- - - - - - - - -
-
-

${companyName} -

-
-

List of ${companyName} users not associated already to ${farmName}

- - - - - -<% - String orderByCol = ParamUtil.getString(request, "orderByCol"); - String orderByType = ParamUtil.getString(request, "orderByType"); - String sortingOrder = orderByType; - - //Logic for toggle asc and desc - if (orderByType.equals("desc")) - orderByType = "asc"; - else - orderByType = "desc"; - if (Validator.isNull(orderByType)) { - orderByType = "asc"; - } -%> - - - - - <% - int totalUsers = siteUsers.size(); - List sortableUsers = ListUtil.subList(siteUsers, searchContainer.getStart(), - searchContainer.getEnd()); - - if (Validator.isNotNull(orderByCol)) { - Collections.sort(sortableUsers, new UserComparator()); - if (sortingOrder.equalsIgnoreCase("desc")) - Collections.reverse(sortableUsers); - } - pageContext.setAttribute("results", sortableUsers); - pageContext.setAttribute("total", totalUsers); - %> - - - - ${item.fullname} - ${item.email} - ${item.jobTitle} - - - - -
-

Please note, Farm Administrator role is company global:

- The Farm Administrator role applies to all the farms a user is assigned to. -
- - - - - - - - - - Liferay.provide( - window, - 'promoteAdminUsers', - function() { - var addUserIds = Liferay.Util.listCheckedExcept(document.fm, 'allRowIds'); - if (addUserIds && confirm("Are you sure you want to promote ${farmName} Administrator the selected user(s)?")) { - document.fm.addUserIds.value = addUserIds; - - submitForm(document.fm, ''); - } else { - - } - }, - ['liferay-util-list-fields'] - ); - -<% } //enf if (operationOK != null && operationOK.compareTo("") != 0) { -else { -%> -<% if (operationFinished) { %> -

Farm admin(s) set correctly

- - - - - A.one('#closeDialog').on('click', function(event) { - Liferay.Util.getOpener().closePopup('dialog'); - }); - -<%}%> -<% } %> \ No newline at end of file diff --git a/src/main/webapp/html/submittedformvalidation/validation.jsp b/src/main/webapp/html/submittedformvalidation/validation.jsp deleted file mode 100644 index 97de961..0000000 --- a/src/main/webapp/html/submittedformvalidation/validation.jsp +++ /dev/null @@ -1,39 +0,0 @@ -<%@include file="../init.jsp"%> -<% - -Team theCompany = (Team) request.getAttribute("theCompany"); -pageContext.setAttribute("companyId", theCompany.getTeamId()); -GCubeTeam theFarm = (GCubeTeam) request.getAttribute("theFarm"); -pageContext.setAttribute("farmId", theFarm.getTeamId()); - -%> - - - - - -
-
-

- Submitted form validation () in progress, please wait few - seconds ... -

-
-
-
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