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618 Commits

Author SHA1 Message Date
Claudio Atzori 7a3f8085f7 switched automatic code formatting plugin to net.revelc.code.formatter:formatter-maven-plugin 2020-04-27 14:45:40 +02:00
Michele Artini 1260d03eba skip empty projects 2020-04-27 13:51:13 +02:00
Miriam Baglioni df34a4ebcc changed the configuration to add ignorecase option to each verb related to covid-19 community 2020-04-27 12:32:56 +02:00
Miriam Baglioni 7a59324ccf changed the test to check for the new ignorecase option 2020-04-27 12:31:46 +02:00
Miriam Baglioni 986c97348d added the ignorecase option to each selection verb 2020-04-27 12:31:05 +02:00
Miriam Baglioni a303fc9f73 resources for testing propagation of result to comminuty from organization and from semrel 2020-04-27 11:14:16 +02:00
Miriam Baglioni c093d764a3 - 2020-04-27 11:12:38 +02:00
Miriam Baglioni c925e2be16 test for propagation of result to community from organization and result to community from semrel 2020-04-27 10:59:53 +02:00
Miriam Baglioni ec7f166690 changed the bl because of changed of the examples for the re implementation of the propagation step 2020-04-27 10:58:41 +02:00
Miriam Baglioni 6135096ef1 refactoring 2020-04-27 10:57:50 +02:00
Miriam Baglioni d30e710165 fixed duplicates action name in the workflow 2020-04-27 10:52:30 +02:00
Miriam Baglioni f9ee343fc0 new parametrized workflow with preparation steps and new parameter input files 2020-04-27 10:48:31 +02:00
Miriam Baglioni e2093644dc changed in the workflow the directory where to store the preparedInfo and the graph genearated at this step 2020-04-27 10:46:44 +02:00
Miriam Baglioni 8a58bf2744 removed the writeUpdate option 2020-04-27 10:45:06 +02:00
Miriam Baglioni 5dccbe13db merge with upstream 2020-04-27 10:43:59 +02:00
Miriam Baglioni 7b6505ec69 new resuorces for testing propagation of project to result after the re-implementation 2020-04-27 10:42:16 +02:00
Miriam Baglioni 1b0e0bd1b5 refactoring 2020-04-27 10:40:26 +02:00
Miriam Baglioni e5a177f0a7 refactoring 2020-04-27 10:36:21 +02:00
Miriam Baglioni e000754c92 refactoring 2020-04-27 10:34:03 +02:00
Miriam Baglioni 95a54d5460 removed the writeUpdate option. The update is available in the preparedInfo path 2020-04-27 10:30:32 +02:00
Miriam Baglioni 8802e4126b re-implemented inverting the couple: from (projectId, relatedResultList) to (resultId, relatedProjectList) 2020-04-27 10:26:55 +02:00
Claudio Atzori 268462623a refined definition of equals and hash methods for Oaf model classes, now based on entity identifier, while relations consider sourceid, targetid and relationship semantic; Factored out function to group Oaf objects in grouping operations; Raw graph creation procedure merges entities and relationships providing the same identity 2020-04-24 14:42:01 +02:00
Claudio Atzori a3e480d1c9 implmented DispatchEntitiesApplication using spark2 datasets 2020-04-24 14:36:53 +02:00
Claudio Atzori 48157e0fc4 GraphHiveImporterJob moved in dedicate package 2020-04-24 14:32:28 +02:00
Miriam Baglioni adcbf0e29a refactoring 2020-04-24 10:47:43 +02:00
Claudio Atzori 278fc9d276 code formatting 2020-04-23 18:51:38 +02:00
miconis 5414236644 Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2020-04-23 18:17:23 +02:00
miconis 8d258c85ff spark dedup test fixed, sample for dataset and orp added, test implemented 2020-04-23 18:16:20 +02:00
Michele Artini 072eae3803 fixed a problem with missing contexts 2020-04-23 16:42:49 +02:00
Michele Artini b164d96874 Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2020-04-23 16:19:16 +02:00
Michele Artini d920ce501e fixed a problem with missing instances 2020-04-23 16:18:40 +02:00
Miriam Baglioni 0e447add66 removed unuseful classes 2020-04-23 12:59:43 +02:00
Miriam Baglioni edb00db86a refactoring 2020-04-23 12:57:35 +02:00
Miriam Baglioni 44fab140de - 2020-04-23 12:42:07 +02:00
Miriam Baglioni 769aa8178a refactoring 2020-04-23 12:40:44 +02:00
Miriam Baglioni d8dc31d4af refactoring 2020-04-23 12:35:49 +02:00
Miriam Baglioni 8c5dac5cc3 removed unuseful classes 2020-04-23 12:30:58 +02:00
Miriam Baglioni 15656684b9 added proeprties for the preparation step and actual propagation. Added the new parametrized workflow 2020-04-23 12:13:34 +02:00
Miriam Baglioni 6f35f5ca42 added the steps of reset output dir and copy information not changed by the propagation step 2020-04-23 12:12:07 +02:00
Miriam Baglioni 19cd5b85c0 changed the classname to execute 2020-04-23 12:07:41 +02:00
Miriam Baglioni fa2ff5c6f5 refactoring 2020-04-23 11:58:26 +02:00
Miriam Baglioni 540f70298b added missing property 2020-04-23 11:51:48 +02:00
Miriam Baglioni e431fe4f5b added the implements Serializable to each class 2020-04-23 11:48:47 +02:00
Miriam Baglioni 24fa81d7e8 implementation parametrized for result type 2020-04-23 11:44:19 +02:00
Miriam Baglioni ab2a24cc2b changed the dependency to use reflections to find annotated classes 2020-04-23 11:08:47 +02:00
Miriam Baglioni 5153d88bd3 defiition of workflow and properties for bulktagging 2020-04-23 11:04:53 +02:00
Miriam Baglioni 3b2e4ab670 test for bulktag 2020-04-23 10:00:10 +02:00
Claudio Atzori 8851050814 replaced hive_db_name with hiveDbName 2020-04-23 08:36:40 +02:00
Claudio Atzori 91f81107b1 applying code formatting 2020-04-23 07:52:32 +02:00
Claudio Atzori 1e7583c5a6 filtered invisible records in data provision workflow 2020-04-23 07:51:34 +02:00
Claudio Atzori 9ddafd46ca fixed dedup record id prefix, set the correct dataInfo in the DedupRecordFactory 2020-04-23 07:50:18 +02:00
Claudio Atzori ade4cb97af fixed parameters passed to the postprocessing action in the workflow mapping the graph as hive DB 2020-04-22 18:24:06 +02:00
Claudio Atzori e81960335c Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2020-04-22 10:46:37 +02:00
Michele Artini 9e4d58f505 ResultType 2020-04-22 10:07:26 +02:00
Claudio Atzori c891661822 small adjustments in the graph2hive workflow 2020-04-21 18:52:23 +02:00
Miriam Baglioni 259525cb93 Merge remote-tracking branch 'upstream/master' 2020-04-21 18:33:46 +02:00
Miriam Baglioni 30e53261d0 minor 2020-04-21 18:00:53 +02:00
Claudio Atzori 0b55795d4d small adjustments in the provisioning workflow 2020-04-21 16:15:04 +02:00
Claudio Atzori 88fbb3a353 added sparkSqlWarehouseDir to the default extra spark options passed to each workflow 2020-04-21 16:13:43 +02:00
Claudio Atzori cd320efa96 added extra spark options to graph to hive workflow 2020-04-21 16:12:20 +02:00
Miriam Baglioni 90c768dde6 added shaded libs module 2020-04-21 16:03:51 +02:00
Claudio Atzori 91e72a6944 Dataset based implementation for SparkCreateDedupRecord phase, fixed datasource entity dump supplementing dedup unit tests 2020-04-21 12:06:08 +02:00
miconis 5c9ef08a8e spark dedup test fixed 2020-04-21 10:19:04 +02:00
Claudio Atzori d772d967aa restored changes from master branch 2020-04-20 18:53:06 +02:00
Claudio Atzori eb8a020859 fixed behaviour of DedupRecordFactory 2020-04-20 18:44:06 +02:00
Claudio Atzori ede1af3d85 Merge branch 'master' into deduptesting 2020-04-20 16:52:14 +02:00
miconis 1102e32462 SparkDedupTest updated and organization dump fixed 2020-04-20 16:49:01 +02:00
Claudio Atzori 667d23c58b finalising Actionset migration workflow 2020-04-20 16:45:21 +02:00
miconis 4da13e4570 Revert "Merge branch 'master' into deduptesting" 
This reverts commit 772f75d167, reversing
changes made to 5f45f2c77f.
 2020-04-20 16:04:49 +02:00
Claudio Atzori 9147af7fed actionsets migration workflow moved in dhp-workflows/dhp-actionmanager 2020-04-20 15:24:33 +02:00
miconis 772f75d167 Merge branch 'master' into deduptesting 2020-04-20 14:50:12 +02:00
Claudio Atzori d714bfb4d4 collectedfrom field moved in common parent class Oaf.java 2020-04-20 12:25:19 +02:00
Michele Artini 8ff7facfa3 fixed collectedFrom ID 2020-04-20 11:09:27 +02:00
Michele Artini 25307965d2 add a default datainfo if missing 2020-04-20 09:43:27 +02:00
Michele Artini d2058fdc47 tests 2020-04-20 09:31:14 +02:00
Michele Artini 478a958f09 tests 2020-04-20 09:15:27 +02:00
Miriam Baglioni e1848b7603 minor 2020-04-18 14:16:42 +02:00
Miriam Baglioni 0ff9b1ef05 added needed parameter 2020-04-18 14:16:29 +02:00
Miriam Baglioni e2dfe8b656 removed not used action 2020-04-18 14:16:07 +02:00
Miriam Baglioni 437ebbad76 refactorign 2020-04-18 14:15:09 +02:00
Miriam Baglioni 9a8876ac86 added needed parameter 2020-04-18 14:14:08 +02:00
Miriam Baglioni 9854852878 refactoring 2020-04-18 14:13:16 +02:00
Miriam Baglioni 454b8a6a29 Merge remote-tracking branch 'upstream/master' 2020-04-18 14:09:44 +02:00
Miriam Baglioni 890ec28f0f input parameters for preparation step1 2020-04-18 14:09:37 +02:00
Miriam Baglioni fbf5c27c27 Added preparation classes before actual propagation 2020-04-18 14:09:03 +02:00
Claudio Atzori 5f45f2c77f Merge branch 'master' into deduptesting 2020-04-18 12:46:40 +02:00
Claudio Atzori ad7a131b18 introduced common project code formatting plugin, works on the commit hook, based on https://github.com/Cosium/git-code-format-maven-plugin, applied to each java class in the project 2020-04-18 12:42:58 +02:00
Claudio Atzori a2938dd059 cleanup 2020-04-18 12:24:22 +02:00
Claudio Atzori 9374ff03ea Merge branch 'master' into deduptesting 2020-04-18 12:06:58 +02:00
Claudio Atzori 71813795f6 various refactorings on the dnet-dedup-openaire workflow 2020-04-18 12:06:23 +02:00
miconis 6450bb0daa test for softwares dedup added. definition of orp, dataset and sw dedup configurations 2020-04-17 17:31:59 +02:00
Miriam Baglioni 72c63a326e removed unuseful class 2020-04-17 17:14:51 +02:00
Miriam Baglioni 00c2ca3ee5 - 2020-04-17 17:14:25 +02:00
Miriam Baglioni 5cd092114f use mergeFrom method to add the new community contexts 2020-04-17 17:13:18 +02:00
Miriam Baglioni 264c82f21e minor 2020-04-17 16:54:46 +02:00
Miriam Baglioni 8c079c7a49 unit test for orcid to result propagation from semrel 2020-04-17 16:53:03 +02:00
Miriam Baglioni eacd140a98 added missing parameter(s) 2020-04-17 16:52:30 +02:00
Miriam Baglioni 390e250faf use the addPid method of the Author class to add a new pid 2020-04-17 16:52:02 +02:00
Miriam Baglioni b46b080ddc use mergeFrom method call to add the country(ies) instead of modify the result directly. 2020-04-17 16:50:54 +02:00
Miriam Baglioni c4987dd12a minor 2020-04-17 16:49:08 +02:00