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1.2 KiB
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18 lines
1.2 KiB
Markdown
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# EMBL-EBIs Protein Data Bank in Europe
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This section describes the mapping implemented for [EMBL-EBIs Protein Data Bank in Europe](https://www.ebi.ac.uk/).
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The Europe PMC RESTful Web Service gives the [datalinks API](https://europepmc.org/RestfulWebService#!/Europe32PMC32Articles32RESTful32API)to retrieve data-literature links in Scholix format .
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## how data is collected
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Starting from the Pubmed collection, we exploit this API to get all the related bioentities related to a Publication with a specific PubMed identifier.
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Following this request: `https://www.ebi.ac.uk/europepmc/webservices/rest/MED/$PMID/datalinks?format=json` we store for each pubmedID the links related.
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## Mapping
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The table below describes the mapping from the EBI links records to the OpenAIRE Graph dump format.
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| *OpenAIRE Result field path* | PubMed record field xpath | Notes |
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|--------------------------------|--------------------------------|---------------------------------------------------------------------------------------------------------------------------------------------------------------|
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