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195 Commits

Author SHA1 Message Date
Miriam Baglioni c6a9f0a1a8 mergin with branch beta 2021-11-16 12:04:40 +01:00
Miriam Baglioni 99d86134f5 [Graph Dump] changed the dump since the measures have been moded at the level of the instance 2021-11-16 12:04:21 +01:00
Sandro La Bruzzo efa09057db Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta 2021-11-15 14:32:09 +01:00
Sandro La Bruzzo 48923e46a1 added documentation to Pubmed Class and also added mvn site for dhp-aggregations 2021-11-15 14:32:01 +01:00
Claudio Atzori 1f2a3d1af0 depending on dhp-schemas:2.8.22 (release) 2021-11-12 10:15:11 +01:00
Sandro La Bruzzo a894d7adf3 updated version of dhp-schemas 2021-10-19 10:02:55 +02:00
Claudio Atzori 914b3e92cb updating graph schema module dependency to version 2.8.20 to include organization parent/child relation constants 2021-10-12 12:00:45 +02:00
Claudio Atzori ebf53a1616 added cleaning for relation fields: subRelType & relClass according to dedicated vocabs 2021-09-15 16:10:37 +02:00
Alessia Bardi 412d2cb16a added dependencies to classgraph and opencsv. Bumped version of dhp-schemas 2021-08-23 14:32:00 +02:00
Michele Artini 52e2315ba2 removed trick for datasourcetypeui 2021-07-28 10:23:00 +02:00
Claudio Atzori bc4b86c27c updated URL in the issueManagement tag 2021-07-13 11:54:32 +02:00
Claudio Atzori 9038fdc771 depending on dhp-schemas:2.7.14 (release) 2021-07-12 17:46:12 +02:00
Sandro La Bruzzo c952c8d236 generate first side of scholix mapping 2021-07-06 09:53:14 +02:00
Sandro La Bruzzo c6fa8598e1 massive code refactor: 
removed modules dhp-*-scholexplorer
 2021-07-01 22:13:45 +02:00
Claudio Atzori fd54ecf7bd bumped dhp-schemas dependency version 2021-06-18 10:08:07 +02:00
Claudio Atzori 10bd6ca194 depending on dhp-schemas:2.5.12 (release) 2021-06-11 16:59:56 +02:00
Claudio Atzori a900bfb874 delegating the date parsing to https://github.com/sisyphsu/dateparser 2021-06-11 16:53:01 +02:00
Claudio Atzori eb6acfbabc [cleaning] removing non parsable relation.validationDate(s) 2021-05-28 10:50:44 +02:00
Claudio Atzori ac3d090e9e bumped dhp-schemas dependency version 2021-05-27 17:31:12 +02:00
Claudio Atzori c3d92247d3 bumped dhp-schemas dependency version 2021-05-27 15:10:51 +02:00
Claudio Atzori 4f58418184 depending on dhp-schemas:2.4.7 (release) 2021-05-24 10:32:48 +02:00
Claudio Atzori 0358ae16ce depending on the latest dhp-schema version 2021-05-14 11:28:33 +02:00
Claudio Atzori d1cbee8413 imported methods from CleaningFunctions, defined in GraphCleaningFunctions 2021-05-10 16:43:39 +02:00
Claudio Atzori 3797543600 MDStoreManager model classes moved in dhp-schemas 2021-05-10 14:32:05 +02:00
Claudio Atzori 923d19ea8e mdstore read lock/unlock when bulk copying records from mongodb to hdfs 2021-05-04 18:06:21 +02:00
Claudio Atzori 5cc3e6d61c bumped pace-core dependency version 2021-05-03 16:40:50 +02:00
Claudio Atzori 91e7220f20 cleaned up workflow for actionset migration, adjusted dnet|cnr* dependency versions 2021-04-29 10:09:52 +02:00
Claudio Atzori 233d849f90 added dnet45-bootstrap-snapshot and dnet45-bootstrap-release repositories 2021-04-27 12:03:40 +02:00
Claudio Atzori 4028176559 enabled snapshots from dnet45-snapshots repository 2021-04-27 11:37:32 +02:00
Claudio Atzori 27ab8a704d adjusted poms to align with the external dhp-schema module 2021-04-27 10:12:27 +02:00
Claudio Atzori c2bb03c8b5 depending on external dhp-schemas module 2021-04-23 17:57:35 +02:00
miconis 2709d08fc2 Merge branch 'stable_ids' into openorgswf 2021-03-29 16:39:07 +02:00
miconis 28c1cdd132 merged stable_ids into openorgswf 2021-03-25 10:44:49 +01:00
Sandro La Bruzzo c73072079d fix conflicts 2021-03-22 16:36:31 +01:00
Claudio Atzori acbe3119a4 RestCollectorPlugin imported from dne45 2021-03-08 09:44:09 +01:00
Claudio Atzori fa7930d2e2 merging contributions from PR#97 2021-03-05 15:45:28 +01:00
miconis 1a85020572 bug fix in graph-mapper, changes in the implementation of the openorgs wf to create relations and populate openorgs db 2021-02-26 10:19:28 +01:00
Claudio Atzori 72c57b28fa switched project version to 1.2.4-branch_hadoop_aggregator-SNAPSHOT 2021-02-04 14:08:18 +01:00
Claudio Atzori d62ea1490d cleaned up RabbitMQ stuff 2021-02-02 10:53:19 +01:00
Michele Artini b9d90e95b8 Added eventId to ShortEventMessage 2021-01-14 14:32:31 +01:00
Claudio Atzori 197f286fa4 removed duplicated dependency (org.apache.httpcomponents:httpclent 2020-12-07 21:52:17 +01:00
Enrico Ottonello 2b0c9bbb7e Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop into orcid-no-doi 2020-11-17 18:24:34 +01:00
Claudio Atzori 628ca54dd3 disable old maven repository URLs 2020-11-17 12:26:16 +01:00
Enrico Ottonello c796adae24 Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop into orcid-no-doi 2020-11-16 11:57:19 +01:00
Claudio Atzori 2facfefc19 updated maven repository URL 2020-11-13 15:38:40 +01:00
Enrico Ottonello 6bc7dbeca7 first version of dataset successful generated from orcid dump 2020 2020-11-06 13:47:50 +01:00
Enrico Ottonello 9818e74a70 added dependency version in main pom.xml for orcid no doi 2020-10-22 16:38:00 +02:00
Enrico Ottonello b0290dbcb7 moved all dependencies version to main pom.xml 2020-10-22 16:20:46 +02:00
Miriam Baglioni ae08b3c0dd merge branch with master 2020-10-05 11:35:55 +02:00
Claudio Atzori 4fddd18403 updating to dnet-pace-core:4.0.5 
- fixed error in the treeprocessor. it used th=-1 as default value, now it use th=1  5021e5048f
- fixed error in the block processor: entities with orderField=null were not considered 9e8ea8f6ee
 2020-10-02 12:37:25 +02:00
Miriam Baglioni 5ef03e5971 added the dependencies from dhp-aggregation for h2020classification 2020-10-01 15:44:40 +02:00
Enrico Ottonello fefbcfb106 dependency version moved to main pom (PR review) 2020-09-22 10:20:25 +02:00
Michele Artini 51321c2701 partition of events by opedoarId 2020-09-17 11:38:07 +02:00
Miriam Baglioni 02a4986e7b Applying changed from code reviews D-Net/dnet-hadoop#40 (comment) and D-Net/dnet-hadoop#40 (comment) and D-Net/dnet-hadoop#40 (comment) 2020-08-13 11:53:01 +02:00
Claudio Atzori 3a11a387a9 data provision workflow enhancement: added nodes to perform DELETE BY QUERY before the indexing begins and COMMIT after the indexing is completed 2020-08-03 14:28:08 +02:00
Claudio Atzori 105176105c updated dnet-pace-core dependency to version 4.0.4 to include the latest clustering function 2020-07-20 09:59:47 +02:00
Claudio Atzori 4b9fb2ffb8 Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2020-07-15 11:26:04 +02:00
Claudio Atzori 5033c25587 code formatting 2020-07-15 11:26:00 +02:00
Michele Artini 262c29463e relations with multiple datasources 2020-07-15 09:18:40 +02:00
Michele Artini 3635d05061 poms 2020-07-13 15:52:23 +02:00
Claudio Atzori c3d67f709a adjusted dedup configuration for result entities: using new wordssuffixprefix clustering function, removed ngrampairs, adjusted queueMaxSize (800) and slidingWindowSize (80) 2020-07-02 17:35:22 +02:00
Claudio Atzori 9cd27183b6 [maven-release-plugin] prepare for next development iteration 2020-06-22 11:27:44 +02:00
Claudio Atzori 1e3dab0631 [maven-release-plugin] prepare release dhp-1.2.3 2020-06-22 11:27:39 +02:00
Claudio Atzori c4d9f1837f [maven-release-plugin] prepare for next development iteration 2020-06-12 12:21:08 +02:00
Claudio Atzori f0746a7605 [maven-release-plugin] prepare release dhp-1.2.2 2020-06-12 12:21:03 +02:00
Claudio Atzori c77fc68484 restored Saxon-HE dependency definition 2020-06-10 14:49:25 +02:00
Sandro La Bruzzo 13815d5d13 improvement DOIBoost 2020-06-01 17:52:12 +02:00
Claudio Atzori 7582532e73 [maven-release-plugin] prepare for next development iteration 2020-05-25 19:48:18 +02:00
Claudio Atzori 01c2e93395 [maven-release-plugin] prepare release dhp-1.2.1 2020-05-25 19:48:14 +02:00
Claudio Atzori 60c40618d3 [maven-release-plugin] prepare for next development iteration 2020-05-11 10:17:14 +02:00
Claudio Atzori c267d958d5 [maven-release-plugin] prepare release dhp-1.2.0 2020-05-11 10:17:10 +02:00
Claudio Atzori 42f1a2bf94 bumped project version to 1.2.0-SNAPSHOT 2020-05-11 10:05:57 +02:00
Claudio Atzori 0ccc864ad9 [maven-release-plugin] prepare for next development iteration 2020-05-08 17:01:31 +02:00
Claudio Atzori 6e47c724c6 [maven-release-plugin] prepare release dhp-1.1.7 2020-05-08 17:01:27 +02:00
Claudio Atzori 77ac995770 cleaned up poms, added descriptions 2020-04-29 18:44:17 +02:00
Claudio Atzori 64d790a266 updated maven plugin dependencies 2020-04-29 16:56:18 +02:00
Claudio Atzori fe81f674ec updated maven-javadoc-plugin to v3.2.0, disabled doclint to avoid compilation to fail in case of incomplete javadoc tags 2020-04-29 16:19:57 +02:00
Claudio Atzori e6d68d1364 added customised style for automatic code formatting, introduced automatic import sorting plugin net.revelc.code:impsort-maven-plugin 2020-04-28 11:09:50 +02:00
Claudio Atzori d3fd05e3c5 switched automatic code formatting plugin to net.revelc.code.formatter:formatter-maven-plugin 2020-04-27 14:52:23 +02:00
Claudio Atzori 7a3f8085f7 switched automatic code formatting plugin to net.revelc.code.formatter:formatter-maven-plugin 2020-04-27 14:45:40 +02:00
Claudio Atzori fad94c2155 updated dependency dnet-pace-core to version 4.0.1 to include 7bc00a3f5f 2020-04-24 16:47:10 +02:00
Claudio Atzori ba4339f142 excluded org.apache.hadoop:hadoop-common from the dnet-actionmanager-common dependency to avoid multiple transitive jaxb-impl versions to conflict when instantiating the ISLookup client stub 2020-04-22 14:23:09 +02:00
Claudio Atzori ad7a131b18 introduced common project code formatting plugin, works on the commit hook, based on https://github.com/Cosium/git-code-format-maven-plugin, applied to each java class in the project 2020-04-18 12:42:58 +02:00
Claudio Atzori 82e8341f50 reorganizing parameter names in the provision workflow 2020-04-14 15:54:41 +02:00
Claudio Atzori 6b5f9ca9cb raw graph creation workflow moved under dhp-graph-mapper, claims integration is included 2020-04-10 17:53:07 +02:00
Claudio Atzori 377e1ba840 [maven-release-plugin] prepare for next development iteration 2020-03-30 20:06:00 +02:00
Claudio Atzori 76d9315129 [maven-release-plugin] prepare release dhp-1.1.6 2020-03-30 20:05:56 +02:00
Claudio Atzori 77c4294924 Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2020-03-26 18:26:52 +01:00
Claudio Atzori 43cbcda7ef unit test for SparkGraphImporterJob 2020-03-26 18:26:40 +01:00
Sandro La Bruzzo 0cd022ad6a merge with master 2020-03-26 14:08:29 +01:00
Claudio Atzori a226198a13 WIP adopting junit5 2020-03-25 16:47:39 +01:00
Claudio Atzori 6cb0a9bff0 dedup wf directory structure aligned with project commons 2020-03-20 16:48:14 +01:00
miconis f32eae5ce9 implementation of the spark action for the simrel creation 2020-03-18 14:27:49 +01:00
Claudio Atzori 9c84e21b87 added workflow to migrate latest version of each actionset content from DM to OCEAN cluster, mapping the targetValues from the old protobuf data model to the dhp.OAF datamodel 2020-03-13 15:56:52 +01:00
Sandro La Bruzzo b021b8a2e1 Added index wf 2020-02-24 10:15:55 +01:00
Michele Artini 4c94e74a84 Added a missing dependency 2020-02-20 11:43:32 +01:00
Claudio Atzori 33185fd0b7 ISLookupClientFactory moved in dhp-common 2020-02-19 16:56:38 +01:00
Sandro La Bruzzo 2b8675462f refactoring code 2020-02-19 10:07:08 +01:00
Claudio Atzori 1b18fd4d54 sync with master branch 2020-02-17 13:49:46 +01:00
Sandro La Bruzzo 76ee85141a added oozie job for DNET migration and implemented Spark job for extracting entities 2020-02-17 12:31:44 +01:00