forked from D-Net/dnet-hadoop
not using impala since the resulting tables are not visible
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@ -1,19 +1,7 @@
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----------------------------------------------------
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-- Shortcuts for various definitions in stats db ---
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-- since these statements are executed using Impala,
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-- we'll have to compute the stats for the tables we use
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----------------------------------------------------
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COMPUTE STATS result;
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COMPUTE STATS result_sources;
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COMPUTE STATS datasource;
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COMPUTE STATS result_datasources;
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COMPUTE STATS datasource_sources;
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COMPUTE STATS country;
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COMPUTE STATS result_organization;
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COMPUTE STATS organization;
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COMPUTE STATS datasource_organizations;
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-- Peer reviewed:
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-- Results that have been collected from Crossref
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create table ${stats_db_name}.result_peerreviewed as
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@ -28,9 +16,8 @@ from peer_reviewed
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union all
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select distinct r.id as id, false as peer_reviewed
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from ${stats_db_name}.result r
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where r.id not in (select id from peer_reviewed);
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COMPUTE STATS result_peerreviewed;
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left outer join peer_reviewed pr on pr.id=r.id
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where pr.id is null;
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-- Green OA:
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-- OA results that are hosted by an Institutional repository and have NOT been harvested from a DOAJ journal.
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@ -40,20 +27,21 @@ with result_green as (
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from ${stats_db_name}.result r
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join ${stats_db_name}.result_datasources rd on rd.id=r.id
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join ${stats_db_name}.datasource d on d.id=rd.datasource
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where r.bestlicence in ('Open Access', 'Open Source') and d.type='Institutional Repository' and not exists (
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select 1 from ${stats_db_name}.result_datasources rd
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left outer join (
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select rd.id from ${stats_db_name}.result_datasources rd
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join ${stats_db_name}.datasource d on rd.datasource=d.id
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join ${stats_db_name}.datasource_sources sds on sds.id=d.id
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join ${stats_db_name}.datasource sd on sd.id=sds.datasource
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where sd.name='DOAJ-ARTICLES' and rd.id=r.id))
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where sd.name='DOAJ-ARTICLES'
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) as doaj on doaj.id=r.id
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where r.bestlicence in ('Open Access', 'Open Source') and d.type='Institutional Repository' and doaj.id is null)
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select distinct result_green.id, true as green
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from result_green
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union all
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select distinct r.id as id, false as green
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from ${stats_db_name}.result r
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where r.id not in (select id from result_green);
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COMPUTE STATS result_greenoa;
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left outer join result_green rg on rg.id=r.id
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where rg.id is null;
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-- GOLD OA:
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-- OA results that have been harvested from a DOAJ journal.
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@ -73,8 +61,6 @@ select distinct r.id, false as gold
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from ${stats_db_name}.result r
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where r.id not in (select id from result_gold);
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COMPUTE STATS result_gold;
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-- shortcut result-country through the organization affiliation
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create table ${stats_db_name}.result_affiliated_country as
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select r.id as id, o.country as country
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@ -83,8 +69,6 @@ join ${stats_db_name}.result_organization ro on ro.id=r.id
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join ${stats_db_name}.organization o on o.id=ro.organization
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where o.country is not null and o.country!='';
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COMPUTE STATS result_affiliated_country;
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-- shortcut result-country through datasource of deposition
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create table ${stats_db_name}.result_deposited_country as
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select r.id as id, o.country as country
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@ -94,5 +78,3 @@ join ${stats_db_name}.datasource d on d.id=rd.datasource
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join ${stats_db_name}.datasource_organizations dor on dor.id=d.id
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join ${stats_db_name}.organization o on o.id=dor.organization
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where o.country is not null and o.country!='';
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COMPUTE STATS result_deposited_country;
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@ -215,31 +215,17 @@
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<param>stats_db_name=${stats_db_name}</param>
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<param>openaire_db_name=${openaire_db_name}</param>
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</hive2>
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<ok to="Step15_5"/>
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<error to="Kill"/>
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</action>
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<action name="Step15_5">
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<hive2 xmlns="uri:oozie:hive2-action:0.1">
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<jdbc-url>${hive_jdbc_url}</jdbc-url>
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<script>scripts/step15_5.sql</script>
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<param>stats_db_name=${stats_db_name}</param>
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<param>openaire_db_name=${openaire_db_name}</param>
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</hive2>
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<ok to="Step16"/>
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<error to="Kill"/>
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</action>
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<action name="Step16">
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<shell xmlns="uri:oozie:shell-action:0.1">
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<job-tracker>${jobTracker}</job-tracker>
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<name-node>${nameNode}</name-node>
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<exec>impala-shell.sh</exec>
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<argument>${stats_db_name}</argument>
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<argument>step16.sql</argument>
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<argument>/user/${wf:user()}/oa/graph/stats/oozie_app/scripts/step16.sql</argument>
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<file>impala-shell.sh</file>
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</shell>
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<hive2 xmlns="uri:oozie:hive2-action:0.1">
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<jdbc-url>${hive_jdbc_url}</jdbc-url>
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<script>scripts/step16.sql</script>
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<param>stats_db_name=${stats_db_name}</param>
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<param>openaire_db_name=${openaire_db_name}</param>
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</hive2>
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<ok to="Step16_5"/>
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<error to="Kill"/>
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</action>
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