refactoring

This commit is contained in:
Miriam Baglioni 2023-05-24 16:20:05 +02:00
parent 34172455d1
commit 9567c13bc3
4 changed files with 39 additions and 38 deletions

View File

@ -28,7 +28,7 @@ public class CommunityConfiguration implements Serializable {
private Map<String, SelectionConstraints> selectionConstraintsMap = new HashMap<>();
// map eosc datasource -> communityid
private Map<String, List<Pair<String, SelectionConstraints>>> eoscDatasourceMap = new HashMap<>();
//map communityid -> remove constraints
// map communityid -> remove constraints
private Map<String, SelectionConstraints> removeConstraintsMap = new HashMap<>();
public Map<String, List<Pair<String, SelectionConstraints>>> getEoscDatasourceMap() {

View File

@ -109,7 +109,7 @@ public class CommunityConfigurationFactory {
return new SelectionConstraints();
}
SelectionConstraints selectionConstraints = new Gson()
.fromJson(constsNode.getText(), SelectionConstraints.class);
.fromJson(constsNode.getText(), SelectionConstraints.class);
selectionConstraints.setSelection(resolver);
log.info("number of selection constraints set " + selectionConstraints.getCriteria().size());

View File

@ -83,18 +83,18 @@ public class ResultTagger implements Serializable {
final Set<String> removeCommunities = new HashSet<>();
conf
.getRemoveConstraintsMap()
.keySet()
.forEach(communityId -> {
if (conf.getRemoveConstraintsMap().get(communityId).getCriteria() != null &&
conf
.getRemoveConstraintsMap()
.get(communityId)
.getCriteria()
.stream()
.anyMatch(crit -> crit.verifyCriteria(param)))
removeCommunities.add(communityId);
});
.getRemoveConstraintsMap()
.keySet()
.forEach(communityId -> {
if (conf.getRemoveConstraintsMap().get(communityId).getCriteria() != null &&
conf
.getRemoveConstraintsMap()
.get(communityId)
.getCriteria()
.stream()
.anyMatch(crit -> crit.verifyCriteria(param)))
removeCommunities.add(communityId);
});
// communities contains all the communities to be added as context for the result
final Set<String> communities = new HashSet<>();
@ -182,7 +182,7 @@ public class ResultTagger implements Serializable {
.keySet()
.forEach(communityId -> {
if (!removeCommunities.contains(communityId) &&
conf.getSelectionConstraintsMap().get(communityId).getCriteria() != null &&
conf.getSelectionConstraintsMap().get(communityId).getCriteria() != null &&
conf
.getSelectionConstraintsMap()
.get(communityId)

View File

@ -40,9 +40,9 @@ public class BulkTagJobTest {
+ " \"description\" : \"$['description'][*]['value']\", "
+ " \"subject\" :\"$['subject'][*]['value']\" , " +
"\"fos\" : \"$['subject'][?(@['qualifier']['classid']=='FOS')].value\"," +
"\"sdg\" : \"$['subject'][?(@['qualifier']['classid']=='SDG')].value\"," +
"\"sdg\" : \"$['subject'][?(@['qualifier']['classid']=='SDG')].value\"," +
"\"hostedby\" : \"$['instance'][*]['hostedby']['key']\" , " +
"\"collectedfrom\" : \"$['instance'][*]['collectedfrom']['key']\"} ";
"\"collectedfrom\" : \"$['instance'][*]['collectedfrom']['key']\"} ";
private static SparkSession spark;
@ -1527,43 +1527,44 @@ public class BulkTagJobTest {
.count());
}
@Test
void removeTest() throws Exception {
final String pathMap = BulkTagJobTest.pathMap;
SparkBulkTagJob
.main(
new String[]{
"-isTest", Boolean.TRUE.toString(),
"-isSparkSessionManaged", Boolean.FALSE.toString(),
"-sourcePath",
getClass().getResource("/eu/dnetlib/dhp/bulktag/sample/dataset/update_datasourcewithconstraints").getPath(),
"-taggingConf", taggingConf,
"-resultTableName", "eu.dnetlib.dhp.schema.oaf.Dataset",
"-outputPath", workingDir.toString() + "/dataset",
"-isLookUpUrl", MOCK_IS_LOOK_UP_URL,
"-pathMap", pathMap
});
.main(
new String[] {
"-isTest", Boolean.TRUE.toString(),
"-isSparkSessionManaged", Boolean.FALSE.toString(),
"-sourcePath",
getClass()
.getResource("/eu/dnetlib/dhp/bulktag/sample/dataset/update_datasourcewithconstraints")
.getPath(),
"-taggingConf", taggingConf,
"-resultTableName", "eu.dnetlib.dhp.schema.oaf.Dataset",
"-outputPath", workingDir.toString() + "/dataset",
"-isLookUpUrl", MOCK_IS_LOOK_UP_URL,
"-pathMap", pathMap
});
final JavaSparkContext sc = JavaSparkContext.fromSparkContext(spark.sparkContext());
JavaRDD<Dataset> tmp = sc
.textFile(workingDir.toString() + "/dataset")
.map(item -> OBJECT_MAPPER.readValue(item, Dataset.class));
.textFile(workingDir.toString() + "/dataset")
.map(item -> OBJECT_MAPPER.readValue(item, Dataset.class));
Assertions.assertEquals(12, tmp.count());
org.apache.spark.sql.Dataset<Dataset> verificationDataset = spark
.createDataset(tmp.rdd(), Encoders.bean(Dataset.class));
.createDataset(tmp.rdd(), Encoders.bean(Dataset.class));
verificationDataset.createOrReplaceTempView("dataset");
String query = "select id, MyT.id community, MyD.provenanceaction.classid provenance, MyD.provenanceaction.classname name "
+ "from dataset "
+ "lateral view explode(context) c as MyT "
+ "lateral view explode(MyT.datainfo) d as MyD "
+ "where MyD.inferenceprovenance = 'bulktagging'";
+ "from dataset "
+ "lateral view explode(context) c as MyT "
+ "lateral view explode(MyT.datainfo) d as MyD "
+ "where MyD.inferenceprovenance = 'bulktagging'";
org.apache.spark.sql.Dataset<Row> idExplodeCommunity = spark.sql(query);
idExplodeCommunity.show(false);
}
}
}