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304 Commits

Author SHA1 Message Date
Antonis Lempesis 9521625a07 code cleanup 2024-03-21 11:45:08 +02:00
Antonis Lempesis 5ae4b4286c Merge branch 'beta' of https://code-repo.d3science.org/antonis.lempesis/dnet-hadoop into beta 2024-03-07 12:15:19 +02:00
Antonis Lempesis 316d585c8a using distinct apcs per publication to avoid huge sums 2024-03-07 02:07:59 +02:00
Antonis Lempesis dd4c27f4f3 added 2 new institutions in monitor 2024-02-08 12:57:57 +02:00
Antonis Lempesis a512ead447 changed orcid ids to all capital 2024-01-30 16:54:47 +02:00
Antonis Lempesis bb10a22290 merged changes from dnet-hadoop 2024-01-29 21:51:47 +02:00
Giambattista Bloisi 078df0b4d1 Use SparkSQL in place of Hive for executing step16-createIndicatorsTables.sql of stats update wf 2024-01-26 21:56:55 +01:00
Antonis Lempesis c548796463 Changed step16-createIndicatorsTables to use a spark oozie action instead of hive 2024-01-26 02:04:48 +02:00
Antonis Lempesis a7115cfa9e max mem of joins (hive.mapjoin.followby.gby.localtask.max.memory.usage) now 80%, up from 55%. 2024-01-25 15:13:16 +01:00
Antonis Lempesis fd43b0e84a max mem of joins (hive.mapjoin.followby.gby.localtask.max.memory.usage) now 80%, up from 55%. 2024-01-25 15:06:34 +01:00
Antonis Lempesis e024718f73 creating result_instances even when no pids exist for the instance 2024-01-10 22:25:50 +01:00
dimitrispie b920307bdd Changes to indicators 2024-01-09 00:47:09 +02:00
Antonis Lempesis 2e4cab026c fixed the result_country definition 2024-01-08 16:01:26 +02:00
dimitrispie 40b98d8182 Changes to indicators and funders definition 
- Changes result_refereed definition
- Added result_country indicator
- Added indi_pub_green_with_license indicator
- Added country from jurisdiction to funders
 2023-12-22 10:29:20 +02:00
Claudio Atzori 93a700742a Merge pull request 'Changes for tables and creation of the new indicator indi_is_result_accessible' (#363) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#363
 2023-12-01 15:05:23 +01:00
dimitrispie c9d995dde0 New institutions added 2023-12-01 15:44:35 +02:00
dimitrispie a397112cb8 Add new indicator 
Add indi_pub_publicly_funded
 2023-12-01 15:00:18 +02:00
dimitrispie 76594ded23 Changes to indicators 
Fixes on open access colours indicators
- indi_pub_green_oa
- indi_pub_gold_oa
- indi_pub_hybrid
- indi_pub_bronze_oa
- indi_pub_diamond
 2023-12-01 13:38:19 +02:00
dimitrispie a94a54a2d0 Changes for tables and creation of the new indicator indi_is_result_accessible 
- Drop table statements for all tables to avoid duplicates in case of wf rerun
- Add pdfsaggregated step to create the indi_is_result_accessible table. This step is executed on the new impala cluster only, since the pdfaggregation_i is updated on this cluster.
 2023-11-15 14:32:18 +02:00
Claudio Atzori 4e6fccf4f6 Merge pull request 'Beta stats wf updated' (#332) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#332
 2023-10-10 09:35:32 +02:00
dimitrispie 17586f0ff8 Update step20-createMonitorDB.sql 
Add result_orcid table to monitor dbs
 2023-10-09 14:21:31 +03:00
dimitrispie 489a082f04 Update step16-createIndicatorsTables.sql 
Change scripts for gold, hybrid, bronze indicators
 2023-10-09 14:00:50 +03:00
dimitrispie 9ef971a146 Update step16-createIndicatorsTables.sql 
Fix int year for:
indi_org_openess_year
indi_org_fairness_year
indi_org_findable_year
 2023-09-19 14:25:42 +03:00
dimitrispie 5f90cc11e9 Update step16-createIndicatorsTables.sql 
Fix indi_pub_bronze_oa
 2023-09-06 14:14:38 +03:00
dimitrispie 964c2f553e Changes in indicators step, monitor step 
- graduatedoctorates for observatory
- result_apc_affiliations table
- new indicators
	indi_is_funder_plan_s
	indi_funder_fairness
	indi_ris_fairness
	indi_funder_openess
	indi_ris_openess
	indi_funder_findable
	indi_ris_findable
	indi_is_project_result_after
- cast year to int in composite indicators
- new institutions
     -- Universidade Católica Portuguesa
     -- Iscte - Instituto Universitário de Lisboa
     -- Munster Technological University
     -- Cardiff University
     -- Leibniz Institute of Ecological Urban and Regional Development
 2023-09-01 10:57:02 +03:00
Giambattista Bloisi bb5b845e3c Use scala.binary.version property to resolve scala maven dependencies 
Ensure consistent usage of maven properties
Profile for compiling with scala 2.12 and Spark 3.4
 2023-07-24 11:13:48 +02:00
dimitrispie be4856ef35 Update step15.sql 2023-07-17 15:33:58 +03:00
dimitrispie 163b2ee2a8 Changes 
1. Monitor updates
2. Bug fixes during copy to impala cluster
 2023-07-13 15:25:00 +03:00
Claudio Atzori b0ebf56367 Merge pull request 'Update step15_5.sql' (#314) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#314
 2023-06-21 10:33:22 +02:00
dimitrispie 2b6370eaee Update step15_5.sql 
Bug fix
 2023-06-21 11:31:10 +03:00
Claudio Atzori 35e42a86ed Merge pull request 'Update step15_5.sql' (#313) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#313
 2023-06-21 10:26:16 +02:00
dimitrispie 74cb060bfe Update step15_5.sql 
Add "if not exists" clause
 2023-06-21 11:24:06 +03:00
Claudio Atzori 85e016df17 Merge pull request 'Update step16-createIndicatorsTables.sql' (#312) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#312
 2023-06-21 09:52:33 +02:00
dimitrispie a475cfcb7b Update step16-createIndicatorsTables.sql 
Rename a field in indi_pub_interdisciplinarity
 2023-06-21 10:42:02 +03:00
Claudio Atzori 979cf9cd87 Merge pull request 'Update step15.sql' (#311) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#311
 2023-06-21 09:20:01 +02:00
dimitrispie 4648cd88d4 Update step15.sql 
Cast score to double
 2023-06-21 10:02:19 +03:00
dimitrispie 94d2573c77 Update step15.sql 
Bug Fix
 2023-06-21 09:22:39 +03:00
Claudio Atzori 0561362de2 Merge pull request 'Update step20-createMonitorDB_institutions.sql' (#309) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#309
 2023-06-20 15:07:09 +02:00
dimitrispie be2caedb04 Update step20-createMonitorDB_institutions.sql 
Add openorgs____::1624ff7c01bb641b91f4518539a0c28a Vrije Universiteit Amsterdam
 2023-06-19 12:12:17 +03:00
dimitrispie 4c770a5e29 Update finalizeImpalaCluster.sh 
Drop views in shadow dbs before dropping the db
 2023-06-15 13:25:37 +03:00
dimitrispie e06d962a6a Update step15.sql 2023-06-15 12:20:35 +03:00
dimitrispie afcad08396 Update step20-createMonitorDB_institutions.sql 
Added openorgs____::c0b262bd6eab819e4c994914f9c010e2   -- National Institute of Geophysics and Volcanology
 2023-06-15 10:28:49 +03:00
Claudio Atzori b9748763e2 Merge pull request '[stats wf] Bug fixes' (#308) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#308
 2023-06-14 21:57:03 +02:00
dimitrispie 42b8ce2ba4 Update copyDataToImpalaCluster.sh 2023-06-14 19:23:42 +03:00
dimitrispie 2032b0df40 Bug fixes 
1. Remove tables/views from old databases in the new cluster, before dropping the dbs
2. Fix id in result_accessroute, indi_impact_measures, indi_pub_bronze_oa
 2023-06-14 19:09:09 +03:00
Claudio Atzori da7b66c542 Merge pull request '[stats wf] Added memory to hive' (#305) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#305
 2023-06-08 08:58:48 +02:00
dimitrispie c5f42c7f5b Added memory to hive 2023-06-07 18:18:23 +03:00
Claudio Atzori afb76ebf0f Merge pull request '[stats wf] Bug fix on indicators step' (#304) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#304
 2023-06-07 16:49:09 +02:00
dimitrispie fa24e2e18f Bug fix on indicators step 
indi_pub_gold_oa table was missing during the creation of other indicators
 2023-06-07 17:43:37 +03:00
Claudio Atzori 01c67e697d Merge pull request '[ stats wf] Bug fix' (#303) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#303
 2023-06-07 14:41:44 +02:00