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2599 Commits

Author SHA1 Message Date
Miriam Baglioni 17292c6641 Hosted By Map - resources for testing purposes 2021-08-02 19:37:08 +02:00
Miriam Baglioni ee7ccb98dc Hosted By Map - test class to verify the application of the hbm to results and datasource 2021-08-02 19:36:18 +02:00
Miriam Baglioni 90e91486e2 Hosted By Map - test class to verify each step in the preparation process 2021-08-02 19:35:52 +02:00
Miriam Baglioni 1e859706a3 Hosted By Map - Classes to apply the HBM to results and datasources 2021-08-02 19:35:23 +02:00
Miriam Baglioni 72df8f9232 Hosted By Map - removed the aggregator for the datasource (it is no more needed) and added a new aggregator for the results. Changed also the hostedBYMap aggregator 2021-08-02 19:34:44 +02:00
Miriam Baglioni ff1ce75e33 Hosted By Map - modification in the code to prepare the info needed to apply the HostedByMap. There is no need to join datasources with the hbm: all the information needed is in the hosted by map already 2021-08-02 19:32:59 +02:00
Claudio Atzori e826aae848 using constants from ModelConstants 2021-08-02 14:28:59 +02:00
Antonis Lempesis 117c3d5c67 fixed a typo 2021-08-02 12:15:58 +03:00
Miriam Baglioni 1695d45bd4 Hosted By Map - Test class to verify the preparation of the intermediate information 2021-07-30 17:57:01 +02:00
Miriam Baglioni 7c6ea2f4c7 Hosted By Map - first attempt for the creation of intermedia information to be used to applu the hosted by map on the graph entities 2021-07-30 17:56:27 +02:00
Miriam Baglioni d8b9b0553b Hosted By Map - model classes to store the intermediate information to be used to apply the hosted by map 2021-07-30 17:55:39 +02:00
Miriam Baglioni 613bd3bde0 Hosted By Map - refactor of the first attemp to prepare a new hosted by map dependent on the datasource in the graph and on two external sources: the gold list from unibi ad the doaj list of open access journal. Both the lists are downloaded from provided url parameter 2021-07-30 17:54:45 +02:00
Miriam Baglioni d1807781c0 mergin with branch beta 2021-07-30 14:34:07 +02:00
Miriam Baglioni 1d6ac3715b merge branch with beta 2021-07-30 11:58:29 +02:00
Claudio Atzori 19620eed46 applying PR#131, Patch the identifiers (source/target) in the relations, refinements 2021-07-30 11:09:32 +02:00
Claudio Atzori 55e6470f44 Merge pull request 'added the sprint 2 indicators in monitor db' (#129) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#129
 2021-07-30 10:11:46 +02:00
Sandro La Bruzzo 6358f92c3a added sleep to solve problem of lost request of creating index 2021-07-30 08:54:37 +02:00
Antonis Lempesis 26af0320d0 added the sprint 2 indicators in monitor db 2021-07-30 00:31:33 +03:00
Claudio Atzori 7b172e7cd9 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-07-29 13:57:06 +02:00
Claudio Atzori c53d106e80 [provision] lowercase relation filter 2021-07-29 13:57:00 +02:00
Sandro La Bruzzo b1b0cc3f15 fixed wrong package name 2021-07-29 13:55:08 +02:00
Miriam Baglioni baad01cadc hostedbymap 2021-07-29 13:04:39 +02:00
Claudio Atzori 5d08ad86ae [raw_all] patching relation identifier phase to be run at the end, i.e. includes also claimed relations 2021-07-29 13:03:16 +02:00
Claudio Atzori e87e1805c4 [raw_all] added extra workflow step for patching the identifiers in the relations, given an id mapping dataset 2021-07-29 12:13:06 +02:00
Claudio Atzori dc55ed4acd Merge pull request '[beta] stats update workflow' (#128) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#128
 2021-07-29 11:13:21 +02:00
Claudio Atzori 908f57a475 code formatting 2021-07-29 10:49:39 +02:00
Sandro La Bruzzo 3721df7aa6 refactoring create actionset of scholexplorer, moved on package dhp-aggregation 2021-07-29 10:45:35 +02:00
Antonis Lempesis 4afa5215a9 fixed a NPE? 2021-07-28 21:59:12 +03:00
Antonis Lempesis 3d1580fa9b fixed a typo 2021-07-28 18:50:31 +03:00
Claudio Atzori 4c5a71ba2f [broker] updated relation descriptors, making use of constant values 2021-07-28 17:11:18 +02:00
Claudio Atzori e1797c0a42 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-07-28 16:21:36 +02:00
Claudio Atzori 6dddad86ee [cleaning] title cleaning based on the me.xuender:unidecode library 2021-07-28 16:21:29 +02:00
Sandro La Bruzzo 3d8f0f629b implemented workflow of creation action set for scholexplorer 2021-07-28 16:15:34 +02:00
Antonis Lempesis 9b181ffa73 added the h2020 classification scheme for projects 2021-07-28 16:31:29 +03:00
Alessia Bardi df8715a1ec format code after mvn compile 2021-07-28 11:58:26 +02:00
Alessia Bardi c806387d4b tests for enermaps 2021-07-28 11:54:36 +02:00
Claudio Atzori 2fff24df55 code formatting 2021-07-28 11:34:19 +02:00
Antonis Lempesis 4a9741825d added result_orcid, result_project provenance, issn in datasources 2021-07-28 12:28:04 +03:00
Miriam Baglioni 3d2bba3d5d removing not needed classes 2021-07-28 11:25:43 +02:00
Miriam Baglioni cc0d3d8a7b mergin with branch beta 2021-07-28 11:24:46 +02:00
Miriam Baglioni 80d5b3b4de DoiBoost AccessRigh #4362 - removing commented code 2021-07-28 11:16:49 +02:00
Miriam Baglioni 5fe016dcbc DoiBoost AccessRigh #4362 - related to https://code-repo.d4science.org/D-Net/dnet-hadoop/pulls/126/files#issuecomment-4194 2021-07-28 11:14:28 +02:00
Miriam Baglioni 73ed7374a9 mergin with branch beta 2021-07-28 11:05:16 +02:00
Miriam Baglioni 43e62fcae9 DoiBoost AccessRigh #4362 - related to https://code-repo.d4science.org/D-Net/dnet-hadoop/pulls/126/files#issuecomment-4193 2021-07-28 11:04:55 +02:00
Miriam Baglioni 708d0ade34 Merge branch 'beta' into hostedbymap 2021-07-28 10:37:22 +02:00
Sandro La Bruzzo 16c91203bd implemented workflow of creation action set for scholexplorer 2021-07-28 10:30:49 +02:00
Miriam Baglioni 6c936943aa mergin with branch beta 2021-07-28 10:24:48 +02:00
Miriam Baglioni 0424f47494 HostedByMap fixing issues 2021-07-28 10:24:13 +02:00
Sandro La Bruzzo 825d9f0289 fixed datacite workflow starting from Importing delta 2021-07-27 16:09:46 +02:00
Claudio Atzori 5aa7d16d1b updated assertions in eu.dnetlib.dhp.oa.graph.raw.MappersTest 2021-07-27 15:11:58 +02:00
Antonis Lempesis 1a28a69cac changed the citeee in *_citations to cites 2021-07-27 15:14:09 +03:00
Miriam Baglioni 74f801b689 mergin with branch beta 2021-07-27 13:18:31 +02:00
Miriam Baglioni eb07f7f40f Hosted By Map 2021-07-27 12:27:26 +02:00
Antonis Lempesis ed185fd7ed added missing colons 2021-07-27 11:42:47 +03:00
Antonis Lempesis f3b9570354 properly invalidating metadata 2021-07-26 13:00:16 +03:00
Sandro La Bruzzo 848aabbb6c minor fix 2021-07-25 12:06:41 +02:00
Sandro La Bruzzo 8fac10c91e fixed defintion wf of creation final infospace of scholexplorer 2021-07-25 11:15:37 +02:00
Sandro La Bruzzo 3920c69bc8 change implementation of resolve Relation to generate jsonRdd in output 2021-07-25 09:51:36 +02:00
Antonis Lempesis f9fbb0f261 added indicators second sprint 2021-07-24 16:40:28 +03:00
Claudio Atzori a0393607a7 mapping funding relations from Datacite should be done according to the actual result identifier 2021-07-23 18:15:08 +02:00
Sandro La Bruzzo d9e3b89937 implemented last part of workflows to generate scholixGraph 2021-07-23 16:38:32 +02:00
Sandro La Bruzzo cfde63a7c3 fixed resolve relation join 2021-07-23 14:17:29 +02:00
Sandro La Bruzzo 4a439c3863 NPE fixed 2021-07-23 14:17:29 +02:00
Sandro La Bruzzo ca74e8dd02 create a separate wf for resolving relation 2021-07-23 11:40:06 +02:00
Sandro La Bruzzo 43e9380cd3 update resolve relation to use the same format of openaire graph 2021-07-23 11:25:18 +02:00
Sandro La Bruzzo 058b636d4d added control to check if the entity exists 2021-07-22 16:08:54 +02:00
Sandro La Bruzzo 62ae36a3d2 fixed NPE 2021-07-22 15:41:38 +02:00
Miriam Baglioni 63553a76b3 added code to download gold issn list from unibi 2021-07-22 12:01:48 +02:00
Miriam Baglioni 1a5b114906 DoiBoost AccessRigh #4362 - refactoring 2021-07-22 12:00:23 +02:00
Sandro La Bruzzo 31d2d6d41e Scholexplorer: introduction of dedup openaire 2021-07-21 18:09:32 +02:00
Miriam Baglioni b226ba4439 mergin with branch beta 2021-07-21 09:46:40 +02:00
Claudio Atzori 10d7b4f0b4 filtering 'old' OpenAIRE ids from the entity.originalId[] array in the OAF -> XML searialization procedure 2021-07-20 11:52:05 +02:00
Miriam Baglioni 83fe31c92e changed the name of the workflows 2021-07-19 18:19:14 +02:00
Miriam Baglioni dd81c36b60 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-07-19 18:18:14 +02:00
Miriam Baglioni 54acc5373b changed the name of the workflows 2021-07-19 18:18:09 +02:00
Miriam Baglioni b420b11ed3 duplicate the number of partitions in ProcessMag 2021-07-19 18:16:23 +02:00
Claudio Atzori 65934888a1 adding record identifier among the originalIds regardless of what IdentifierFactory produces 2021-07-19 17:52:52 +02:00
Claudio Atzori 0977baf41d contents mapped from the stores with 'claim' interpretation will not change their identifier along their way towards the graph 2021-07-19 17:43:52 +02:00
Miriam Baglioni 662c396354 duplicate the number of partitions in ConvertCrossrefToOaf 2021-07-19 12:41:14 +02:00
Miriam Baglioni 59530a14fb DoiBoost AccessRigh #4362 - set BestAccessRight with the ususal comparator 2021-07-19 12:34:35 +02:00
Miriam Baglioni 199123b74b DoiBoost AccessRigh #4362 - Fixed issue on date formatting. Added test method and associated resource 2021-07-16 17:30:27 +02:00
Miriam Baglioni 3bc9a05bc9 mergin with branch beta 2021-07-16 10:32:27 +02:00
Miriam Baglioni 34506df1b6 DoiBoost AccessRigh #4362 - if the journal is open, the OPEN access right is set to all instances and color is GOLD (overwrite if the color was already set in one of the previous steps) 2021-07-16 10:29:51 +02:00
Claudio Atzori bf9e0d2d4f Merge pull request 'orcid-no-doi' (#123) from enrico.ottonello/dnet-hadoop:orcid-no-doi into beta 
Reviewed-on: D-Net/dnet-hadoop#123
 2021-07-15 17:59:41 +02:00
Sandro La Bruzzo 7e2caafe84 Scholexplorer: fixed mapping typologies 2021-07-15 09:53:12 +02:00
Miriam Baglioni 4da46bb62f mergin with branch beta 2021-07-14 15:08:52 +02:00
Miriam Baglioni 09ad7b2a9e DoiBoost AccessRigh #4362 - Unpaywall mapped to OAF with OPEN instance (non oa are filtered out) (unknown hostedby) + map the color as it is 2021-07-14 14:45:21 +02:00
Miriam Baglioni f4f7c6f9d3 DoiBoost AccessRigh #4362 - Unpaywall mapped to OAF with OPEN instance (non oa are filtered out) (unknown hostedby) + map the color as it is 2021-07-14 14:44:54 +02:00
Miriam Baglioni 6222adf176 DoiBoost AccessRigh #4362 - added resources and test for crossref mapping (licence part included) 2021-07-14 14:42:34 +02:00
Miriam Baglioni 981b1018f6 DoiBoost AccessRigh #4362 - decide access right according to licence. Default access right is Unknown 2021-07-14 14:42:06 +02:00
Sandro La Bruzzo 3d8e2aa146 Code refactor: 
- removed old workflows in doiboost
 - splitted workflow of doiboost in preprocess and process
 2021-07-14 14:37:06 +02:00
Miriam Baglioni 441701c85c DoiBoost AccessRigh #4362 - If multiple licenses are available, take the one applied to 'vor' 2021-07-14 14:14:50 +02:00
Sandro La Bruzzo c35c117601 fixed process doiboost workflow: 
- splitted OrcidToOAF into two phase preprocess and process
- updated workflow used in production
 2021-07-14 12:48:01 +02:00
Sandro La Bruzzo bbe8193930 merged stable ids 2021-07-12 17:00:43 +02:00
Claudio Atzori ae2b47b29d [broker] added coalesce(1) on the stats dataset before storing it on postgres 2021-07-09 15:47:51 +02:00
Sandro La Bruzzo 57c74c73c6 fixed mistakes in oozie workflow 2021-07-09 12:28:09 +02:00
Sandro La Bruzzo 61ccb54fde removed wrong loop on oozie wf 2021-07-09 12:17:57 +02:00
Sandro La Bruzzo 9f5a0f3ab6 moved wf indexing of Scholexplorer in dhp-graph-provision 2021-07-09 12:06:43 +02:00
Sandro La Bruzzo 09fccf8000 added workflow to serialize scholix and summary in json 2021-07-09 11:01:42 +02:00
Sandro La Bruzzo 0ea576745f updated CreateInputGraph because ggenerics don't work on Spark Dataset 2021-07-09 10:29:24 +02:00