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424 Commits

Author SHA1 Message Date
Claudio Atzori 94ccdb4852 Merge branch 'master' into merge_graph 2020-07-20 10:14:55 +02:00
Michele Artini 331a3cbdd0 fixed originalId 2020-07-20 09:50:29 +02:00
Sandro La Bruzzo 9116d75b3e Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2020-07-17 18:01:30 +02:00
Miriam Baglioni 47c7122773 changed priority from beta to production 2020-07-17 12:56:35 +02:00
Michele Artini 442f30930c removed duplicated fields 2020-07-17 12:25:36 +02:00
Claudio Atzori 1781609508 code formatting 2020-07-16 19:06:56 +02:00
Claudio Atzori 878f2b931c Merge branch 'master' into merge_graph 2020-07-16 16:34:24 +02:00
Miriam Baglioni f9ad6f3255 Merge branch 'dump' of code-repo.d4science.org:miriam.baglioni/dnet-hadoop into dump 2020-07-10 19:42:53 +02:00
Miriam Baglioni c27f12d6e8 avoid to consider _SUCCESS file 2020-07-10 19:42:23 +02:00
Claudio Atzori 31071e363f Merge branch 'provision_indexing' 2020-07-10 19:03:57 +02:00
Claudio Atzori cc77446dc4 added dbSchema parameter to the raw_db workflow 2020-07-10 19:01:50 +02:00
Michele Artini e1ae964bc4 stats 2020-07-10 16:12:08 +02:00
Sandro La Bruzzo c01efed79b Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2020-07-10 14:44:57 +02:00
Sandro La Bruzzo a7d3977481 added generation of EBI Dataset 2020-07-10 14:44:50 +02:00
Claudio Atzori 67e1d222b6 bulk cleaning when found null or empty, sets bestaccessrights evaluating the result instances 2020-07-08 17:53:35 +02:00
Claudio Atzori 610d377d57 first implementation of the BETA & PROD graphs merge procedure 2020-07-08 16:54:26 +02:00
Alessia Bardi 9a898c0e4c Json schema generator 2020-07-08 12:52:00 +02:00
Alessia Bardi 636f9ce7d6 json schema generator lib 2020-07-08 12:50:57 +02:00
Alessia Bardi 8f83b726fa Dump json schema compliant to json schema Draft 7 2020-07-08 12:48:46 +02:00
Miriam Baglioni 1b0b968548 fixed issue on substring 2020-07-08 12:11:51 +02:00
Miriam Baglioni 7fe00cb4fb - 2020-07-08 10:29:37 +02:00
Miriam Baglioni 375ef07d7b changed the description for the upload 2020-07-07 18:41:27 +02:00
Miriam Baglioni 35c8265793 added the json extention to filename 2020-07-07 18:29:49 +02:00
Miriam Baglioni 81434f8e5e added method newInstance 2020-07-07 18:26:10 +02:00
Miriam Baglioni 817cddfc52 - 2020-07-07 18:25:12 +02:00
Miriam Baglioni a66aa9bd83 removed unuseful tests 2020-07-07 18:25:00 +02:00
Miriam Baglioni 9b20a21b24 removed unuseful tests 2020-07-07 18:23:37 +02:00
Miriam Baglioni 8a1b42ff21 added check to verify that dump contains at least one product 2020-07-07 18:21:35 +02:00
Miriam Baglioni d86adb82a7 - 2020-07-07 18:20:51 +02:00
Miriam Baglioni b2782025f6 enabled the whole workflow to run. Added property to give priority to depenedency in the classpath - to solve conflicts 2020-07-07 18:10:47 +02:00
Miriam Baglioni 83d2c84b77 added constraints to xquery so that to get only profiles with status manager or all 2020-07-07 18:09:48 +02:00
Miriam Baglioni 4c8d86493c - 2020-07-07 18:09:06 +02:00
Miriam Baglioni 0208bc18f3 added new resource for testing 2020-07-07 17:47:24 +02:00
Miriam Baglioni f5bb65c9ef the json schema for the dump of the results 2020-07-07 17:34:40 +02:00
Miriam Baglioni c19818a3f8 merge branch with fork master 2020-07-06 13:58:23 +02:00
Miriam Baglioni f8bf4acd76 - 2020-07-02 16:03:11 +02:00
Miriam Baglioni e6c79d44e6 - 2020-07-02 16:02:02 +02:00
Miriam Baglioni d7f6f0c216 changed code to use other lib 2020-07-02 16:01:34 +02:00
Miriam Baglioni 8fdc9e070c added dependency to OkHttp 2020-07-02 16:01:08 +02:00
Miriam Baglioni 94500a581b merge branch with fork master 2020-07-02 14:25:39 +02:00
Claudio Atzori ed1c7e5d75 fixed workflow for the import of the claims alone 2020-07-02 12:40:21 +02:00
Sandro La Bruzzo 1d420eedb4 added generation of EBI Dataset 2020-07-02 12:37:43 +02:00
Claudio Atzori e4a29a4513 fixed workflow for the import of the claims alone 2020-07-02 12:36:33 +02:00
Claudio Atzori 6f5771c1c9 sets author.rank when null 2020-06-25 14:06:21 +02:00
Claudio Atzori 2d77d3a388 Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2020-06-25 12:54:30 +02:00
Miriam Baglioni 05a99cfb61 change the position of value and description elements in the workflow definition 2020-06-25 12:36:08 +02:00
Claudio Atzori 7df2712824 Merge branch 'provision_indexing' 2020-06-25 12:22:41 +02:00
Michele Artini abcbebcbb4 fixed generation of ids 2020-06-25 09:50:46 +02:00
Michele Artini 77d2a1b1c4 params to choose sql queries for beta or production 2020-06-25 09:28:13 +02:00
Claudio Atzori 0e723d378b added default from vocab for missing instance.refereed; remove spurious prefixes from orcid values; WIP: prepare relation job 2020-06-24 18:34:42 +02:00
Miriam Baglioni 3e5570de7a - 2020-06-23 15:44:54 +02:00
Michele Artini 38bb45d0b6 test osf:refereed 2020-06-23 10:14:39 +02:00
Miriam Baglioni e4b21be004 - 2020-06-22 17:31:50 +02:00
Miriam Baglioni afa19b0c84 changed the way to PUT the files to the rest API 2020-06-22 17:20:07 +02:00
Miriam Baglioni 250fd1c854 merge branch with fork master 2020-06-22 16:25:48 +02:00
Claudio Atzori 9cd27183b6 [maven-release-plugin] prepare for next development iteration 2020-06-22 11:27:44 +02:00
Claudio Atzori 1e3dab0631 [maven-release-plugin] prepare release dhp-1.2.3 2020-06-22 11:27:39 +02:00
Miriam Baglioni df80ae5c1b merge branch with fork master 2020-06-22 10:51:23 +02:00
Miriam Baglioni e8f914f8b3 - 2020-06-22 10:50:41 +02:00
Miriam Baglioni edeb862476 excluded dependency in module that generates conflict 2020-06-22 10:49:56 +02:00
Miriam Baglioni 185facb8e5 change the deprecated DefaultHttpClient with the CLoseableHttpClient 2020-06-22 10:49:10 +02:00
Claudio Atzori 7d416f08d8 graph cleaning workflow: set hostedby to unknown repository when defined as NULL 2020-06-22 09:50:43 +02:00
Miriam Baglioni 669a509430 - 2020-06-19 17:39:46 +02:00
Claudio Atzori d0ac7514b2 cleaning workflow to include cleaning of default values 2020-06-18 19:37:25 +02:00
Miriam Baglioni 44a12d244f - 2020-06-18 18:38:54 +02:00
Miriam Baglioni fb80353018 - 2020-06-18 14:21:36 +02:00
Miriam Baglioni 65bf312360 merge branch with fork master 2020-06-18 11:35:27 +02:00
Miriam Baglioni 3953f56bd3 added dependency to pom 2020-06-18 11:34:47 +02:00
Miriam Baglioni a118b66858 - 2020-06-18 11:34:30 +02:00
Miriam Baglioni f9578312b5 - 2020-06-18 11:34:15 +02:00
Miriam Baglioni 8b145e6aba - 2020-06-18 11:25:28 +02:00
Miriam Baglioni e8b3e972f2 changed the input params and the workflow definition to tackle the Result as all result product produced 2020-06-18 11:25:05 +02:00
Miriam Baglioni 3233b01089 changes due to adding all the result type under Result 2020-06-18 11:22:58 +02:00
Miriam Baglioni 5c8533d1a1 changed in the testing classes 2020-06-18 11:20:08 +02:00
Miriam Baglioni bc8611a95a added new resources for testing 2020-06-18 11:19:20 +02:00
Sandro La Bruzzo 9bf67f5de1 resolved conflicts 2020-06-17 09:15:43 +02:00
Sandro La Bruzzo 1d4275acc4 implemented first version of exportation of Scholexplorer into ActionSet 2020-06-17 09:10:38 +02:00
Claudio Atzori 1bc1d15eaf stubbing for mock datasource.identities must be typed as array 2020-06-16 16:54:28 +02:00
Claudio Atzori 5441f01586 Merge pull request 'missing landingPage urls in instances' (#22) from instances-with-landing-page into master 
Looks good, thanks!
 2020-06-16 15:32:44 +02:00
Claudio Atzori 89859111ee Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2020-06-16 15:28:29 +02:00
Claudio Atzori 4ec262db53 included externalreference(s) in the result view on the Hive graph DB 2020-06-16 15:28:20 +02:00
Michele Artini 8a4f84f8c0 refactoring 2020-06-16 12:34:13 +02:00
Claudio Atzori 2a4f65795f WIP: graph cleaner implementation 2020-06-15 18:32:24 +02:00
Claudio Atzori c15c8c0ad0 map datasource identities (including piwik ids) as original IDs 2020-06-15 16:07:30 +02:00
Miriam Baglioni 9dd3ef22c5 merge branch with fork master 2020-06-15 11:23:26 +02:00
Miriam Baglioni 68cf0fd03f test input 2020-06-15 11:14:42 +02:00
Miriam Baglioni 0467145ae3 test for graph dump 2020-06-15 11:13:51 +02:00
Miriam Baglioni e43eedb5b0 added resources and workflow for dump of community products 2020-06-15 11:13:21 +02:00
Miriam Baglioni f96ca900e1 fixed issues while running on cluster 2020-06-15 11:12:14 +02:00
Miriam Baglioni 20b9e67728 added new class funder 2020-06-15 11:06:18 +02:00
Claudio Atzori 0d52816244 WIP: graph cleaner implementation 2020-06-13 13:06:04 +02:00
Claudio Atzori bed65a1be6 WIP: graph cleaner implementation 2020-06-12 18:25:47 +02:00
Claudio Atzori c4d9f1837f [maven-release-plugin] prepare for next development iteration 2020-06-12 12:21:08 +02:00
Claudio Atzori f0746a7605 [maven-release-plugin] prepare release dhp-1.2.2 2020-06-12 12:21:03 +02:00
Claudio Atzori 463489f59f code formatting 2020-06-12 12:03:25 +02:00
Claudio Atzori 4bcad1c9c3 Merge branch 'graph_cleaning' 2020-06-12 11:40:25 +02:00
Claudio Atzori cdb1956fe9 WIP: graph cleaner implementation 2020-06-12 11:36:59 +02:00
Alessia Bardi b347499745 do not use deprecated subreltype 2020-06-12 10:58:02 +02:00
Claudio Atzori 97b1c4057c WIP: graph cleaner implementation 2020-06-12 10:45:18 +02:00
Claudio Atzori ba8a024af9 avoid NPEs merging titles 2020-06-12 10:45:11 +02:00
Miriam Baglioni e145972962 - 2020-06-11 13:08:39 +02:00
Miriam Baglioni a01800224c - 2020-06-11 13:02:04 +02:00
Miriam Baglioni 356dd582a3 map construction moved in class 2020-06-11 12:59:22 +02:00
Michele Artini a41e0cb648 missing landingPage urls in instances 2020-06-11 12:28:34 +02:00
Michele Artini 99f88e1cb8 fixed generation entities from claims 2020-06-11 10:51:57 +02:00
Miriam Baglioni db27663750 - 2020-06-11 10:49:01 +02:00
Miriam Baglioni bb9f21d0e7 job test for class producing first step of results dump 2020-06-11 10:20:05 +02:00
Claudio Atzori d1d92c4d8c fixed integration of claims in the graph 2020-06-11 10:12:00 +02:00
Claudio Atzori 953da4a427 Merge branch 'master' into graph_cleaning 2020-06-10 21:36:56 +02:00
Claudio Atzori f1bce64391 WIP: graph cleaner implementation 2020-06-10 21:36:31 +02:00
Michele Artini c08e66e01e fixed a workflow parameter 2020-06-10 10:11:56 +02:00
Michele Artini 7177a32d75 import of invisible stores 2020-06-10 10:04:00 +02:00
Claudio Atzori a2fdf85ba1 WIP: graph cleaner implementation 2020-06-09 19:52:53 +02:00
Claudio Atzori d9f33582c5 WIP: graph cleaner implementation 2020-06-09 17:20:40 +02:00
Miriam Baglioni a089db18f1 workflow and parameters to exucute the dump 2020-06-09 15:39:38 +02:00
Miriam Baglioni 6bbe27587f new classes to execute the dump for products associated to community, enrich each result with project information and assign the result to each community it belongs to 2020-06-09 15:39:03 +02:00
Miriam Baglioni 5121cbaf6a new classes for external dump. Only classes functional to dump products 2020-06-09 15:37:46 +02:00
Claudio Atzori b2349659cf WIP: graph property fixing implementation 2020-06-05 18:37:38 +02:00
Claudio Atzori 5e23fb3a74 code formatting 2020-05-30 10:52:56 +02:00
Claudio Atzori 54ca8ed6c3 uniformed param name (isLookupUrl), Vocab model classes defined as Serializable 2020-05-29 18:17:30 +02:00
Claudio Atzori 1577bd5b8b added IsLookupUrl to the raw_db workflow parameters 2020-05-29 16:18:16 +02:00
Michele Artini adb798faa5 import from db using is vocabularies 2020-05-29 12:03:51 +02:00
Michele Artini f5ce7d76e1 resolve conflicts 2020-05-27 12:49:17 +02:00
Michele Artini b81f2741d2 xquery 2020-05-27 12:10:20 +02:00
Michele Artini a25598140a result pids (new xpaths + IS vocabularies) 2020-05-27 12:10:20 +02:00
Michele Artini 7a7272d9ec result pids (new xpaths + IS vocabularies) 2020-05-27 12:10:20 +02:00
Michele Artini 3ceb2d2853 match terms with vocabularies 2020-05-27 11:34:13 +02:00
Michele Artini c15d997925 xquery 2020-05-26 13:13:17 +02:00
Michele Artini c6af36496a result pids (new xpaths + IS vocabularies) 2020-05-26 13:11:09 +02:00
Michele Artini 093f1aff03 result pids (new xpaths + IS vocabularies) 2020-05-26 13:06:55 +02:00
Miriam Baglioni 54d869e618 merge upstream 2020-05-26 09:22:04 +02:00
Claudio Atzori 7582532e73 [maven-release-plugin] prepare for next development iteration 2020-05-25 19:48:18 +02:00
Claudio Atzori 01c2e93395 [maven-release-plugin] prepare release dhp-1.2.1 2020-05-25 19:48:14 +02:00
Miriam Baglioni d3d36647d2 merge upstream 2020-05-25 10:38:22 +02:00
Miriam Baglioni dbde2d243a changed due to move of PacePerson from dhp-graph-mapper to dhp-common 2020-05-25 10:35:39 +02:00
Miriam Baglioni 8f6ce970f9 moved PacePerson to dhp-common to avoid conflict in dependency with graph-mapper 2020-05-25 10:25:55 +02:00
Claudio Atzori de108f54d6 code formatting 2020-05-23 10:21:19 +02:00
Claudio Atzori 6b56cae57d added mapping for bestaccessrights 2020-05-23 09:57:39 +02:00
Claudio Atzori 3cf2796ac6 code formatting 2020-05-22 12:34:00 +02:00
Michele Artini dc4621b3cb filter ORCID e MAG identifiers 2020-05-22 12:25:01 +02:00
Michele Artini 9f2d0f1b08 filter ORCID e MAG identifiers 2020-05-22 11:00:27 +02:00
Michele Artini 9de71e54a8 filter ORCID e MAG identifiers 2020-05-22 10:47:39 +02:00
Michele Artini c5f7e17348 author fullnames 2020-05-22 10:08:02 +02:00
Michele Artini e43d4d7778 added a coalesce in sql query 2020-05-21 11:08:07 +02:00
Michele Artini b3bcbb3129 resolve name of organization countries 2020-05-21 08:41:32 +02:00
Claudio Atzori 7838f2c63f init the empty list for author pids mapped from OAF 2020-05-15 17:06:01 +02:00
Claudio Atzori 7a89507ab1 code formatting 2020-05-15 15:16:54 +02:00
Claudio Atzori cfc8948717 fixed mapping OdfToGraph: pick the correct element to map author pids and author affiliations; extended mapping Oaf2Graph: added support for author pids 2020-05-15 12:26:16 +02:00
Claudio Atzori a832658296 code formatting 2020-05-15 10:21:09 +02:00
Claudio Atzori 18f46e47b9 added relations to the graph2hive import workflow 2020-05-15 09:34:48 +02:00