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476 Commits

Author SHA1 Message Date
Claudio Atzori ec5dfc068d added spark.sql.shuffle.partitions=3840 to dedup scan wf 2020-04-16 14:41:28 +02:00
Claudio Atzori 09f356b047 Merge pull request 'Closes #7: subdirs inside graph table dirs' (#8) from przemyslaw.jacewicz/dnet-hadoop:przemyslawjacewicz_7_distcp_configuration_fix into master 
Run the code from this PR in isolation and it worked fine. Thanks!
 2020-04-16 14:38:46 +02:00
Claudio Atzori 3437383112 Merge branch 'master' into deduptesting 2020-04-16 12:46:14 +02:00
miconis 0eccbc318b Deduper class (utilities for dedup) cleaned. Useless methods removed 2020-04-16 12:36:37 +02:00
Claudio Atzori 76d23895e6 Merge branch 'deduptesting' of https://code-repo.d4science.org/D-Net/dnet-hadoop into deduptesting 2020-04-16 12:18:32 +02:00
miconis 6a089ec287 minor changes 2020-04-16 12:15:38 +02:00
Claudio Atzori 376efd67de removed prepare statement in spark action 2020-04-16 12:14:16 +02:00
miconis 9b36458b6a Merge branch 'deduptesting' of code-repo.d4science.org:D-Net/dnet-hadoop into deduptesting 2020-04-16 12:13:58 +02:00
miconis cd4d9a148f creating temporary directories in dedup test 2020-04-16 12:13:26 +02:00
Claudio Atzori b39ff36c16 improving the wf definitions 2020-04-16 12:11:37 +02:00
Claudio Atzori 011b342bc9 trying to avoid OOM in SparkPropagateRelation 2020-04-16 11:13:51 +02:00
Claudio Atzori 069ef5eaed trying to avoid OOM in SparkPropagateRelation 2020-04-15 21:23:21 +02:00
Claudio Atzori 8eedfefc98 try to introduce intermediate serialization on hdfs to avoid OOM 2020-04-15 18:35:35 +02:00
Przemysław Jacewicz da019495d7 [dhp-actionmanager] target dir removal added for distcp actions 2020-04-15 17:56:57 +02:00
miconis 5689d49689 minor changes 2020-04-15 16:34:06 +02:00
Claudio Atzori c439d0c6bb PromoteActionPayloadForGraphTableJob reads directly the content pointed by the input path, adjusted promote action tests (ISLookup mock) 2020-04-15 16:18:33 +02:00
Claudio Atzori ff30f99c65 using newline delimited json files for the raw graph materialization. Introduced contentPath parameter 2020-04-15 16:16:20 +02:00
Sandro La Bruzzo 3d3ac76dda Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2020-04-15 15:24:01 +02:00
Sandro La Bruzzo 74a7fac774 fixed problem with timestamp 2020-04-15 15:23:54 +02:00
Alessia Bardi 550a9f82ed Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2020-04-14 17:53:01 +02:00
Alessia Bardi a68fae9bcb now supporting openaire 4.0 compliance 2020-04-14 17:52:48 +02:00
Sandro La Bruzzo c36239e693 fixed incremental indexing 2020-04-14 17:47:36 +02:00
Claudio Atzori 82e8341f50 reorganizing parameter names in the provision workflow 2020-04-14 15:54:41 +02:00
Claudio Atzori 6b5f9ca9cb raw graph creation workflow moved under dhp-graph-mapper, claims integration is included 2020-04-10 17:53:07 +02:00
miconis 0be2e72be5 further implementation of tests for the deduplication of each entity. publication dump added, empty entity files created 2020-04-08 18:02:30 +02:00
Claudio Atzori 47f3d9b757 unit test for GraphHiveImporterJob 2020-04-08 13:24:43 +02:00
Sandro La Bruzzo ba9f07a6fe fixed wrong test 2020-04-08 13:18:20 +02:00
Claudio Atzori d74e128aa6 Utility classes moved in dhp-common and dhp-schemas 2020-04-07 11:56:22 +02:00
Claudio Atzori c57cf679ca Merge branch 'provision_dataset' 2020-04-07 08:56:58 +02:00
Claudio Atzori 1a1a026a18 we do expect to find field bestaccessright already defined. No need to add it again 2020-04-07 08:55:33 +02:00
Claudio Atzori fbdd18a96b using dataset based relation preparation procedure 2020-04-07 08:54:39 +02:00
Claudio Atzori 77f59b1b10 dataset based provision WIP 2020-04-06 19:37:27 +02:00
Claudio Atzori 6177cf36fb Merge pull request 'Closes #4: New action manager implementation' (#5) from przemyslaw.jacewicz/dnet-hadoop:przemyslawjacewicz_actionmanager_impl_prototype into master 
Nothing more to add here. Thanks for your contribution!
 2020-04-06 17:35:07 +02:00
Claudio Atzori e355961997 dataset based provision WIP 2020-04-06 17:34:25 +02:00
miconis 56fbe689f0 implementation of the tests for each spark action 2020-04-06 16:30:31 +02:00
Claudio Atzori ca345aaad3 dataset based provision WIP 2020-04-06 15:33:31 +02:00
Claudio Atzori c8f4b95464 dataset based provision WIP 2020-04-06 08:59:58 +02:00
Claudio Atzori eb2f5f3198 dataset based provision WIP 2020-04-04 17:41:31 +02:00
Claudio Atzori 3d1b637cab dataset based provision WIP 2020-04-04 14:03:43 +02:00
miconis 53fd624c34 implemented test for sparkcreatesimrels 2020-04-03 18:32:25 +02:00
Claudio Atzori 24b2c9012e dataset based provision WIP 2020-04-02 18:44:09 +02:00
miconis a61763d149 structure for sparksimrel changed to be compliant with mockito testing 2020-04-02 18:37:53 +02:00
Claudio Atzori daa26acc9d dataset based provision WIP, fixed spark2EventLogDir 2020-04-02 16:15:50 +02:00
Przemysław Jacewicz 7b2a7e2417 [dhp-actionmanager] missing descriptions added and minor naming and formatting fixes 2020-04-02 11:48:40 +02:00
Claudio Atzori 9c7092416a dataset based provision WIP 2020-04-01 19:07:30 +02:00
miconis bfa5bc74df minor changes 2020-04-01 19:05:48 +02:00
Przemysław Jacewicz 80cf43b9c8 [dhp-actionmanager] promoting workflow added 2020-04-01 18:51:25 +02:00
Przemysław Jacewicz 5b459bcc47 [dhp-actionmanager] promoting spark job added 2020-04-01 18:49:08 +02:00
miconis 9802bcb9fe dedup testing 2020-04-01 18:48:31 +02:00
Przemysław Jacewicz e21bb89dbd [dhp-actionmanager] partitioning spark job added 2020-04-01 18:41:29 +02:00