From 91354c6068c49ac2d2732653c64dcef481cb3a52 Mon Sep 17 00:00:00 2001 From: Antonis Lempesis Date: Mon, 8 Nov 2021 15:15:46 +0200 Subject: [PATCH] - fetching all context related results - storing tables as parquet --- .../scripts/step20-createMonitorDB.sql | 68 +++++++++---------- 1 file changed, 34 insertions(+), 34 deletions(-) diff --git a/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step20-createMonitorDB.sql b/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step20-createMonitorDB.sql index d39af37d5..885d9bba2 100644 --- a/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step20-createMonitorDB.sql +++ b/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step20-createMonitorDB.sql @@ -11,7 +11,7 @@ create view if not exists TARGET.funder as select * from SOURCE.funder; create view if not exists TARGET.fundref as select * from SOURCE.fundref; create view if not exists TARGET.rndexpenditure as select * from SOURCE.rndexpediture; -create table TARGET.result as +create table TARGET.result stored as parquet as select distinct * from ( select * from SOURCE.result r where exists (select 1 from SOURCE.result_projects rp join SOURCE.project p on rp.project=p.id where rp.id=r.id) union all @@ -24,58 +24,58 @@ create table TARGET.result as 'openorgs____::eadc8da90a546e98c03f896661a2e4d4') )) foo; compute stats TARGET.result; -create table TARGET.result_citations as select * from SOURCE.result_citations orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_citations stored as parquet as select * from SOURCE.result_citations orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_citations; -create table TARGET.result_classifications as select * from SOURCE.result_classifications orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_classifications stored as parquet as select * from SOURCE.result_classifications orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_classifications; -create table TARGET.result_concepts as select * from SOURCE.result_concepts orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_concepts stored as parquet as select * from SOURCE.result_concepts orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_concepts; -create table TARGET.result_datasources as select * from SOURCE.result_datasources orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_datasources stored as parquet as select * from SOURCE.result_datasources orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_datasources; -create table TARGET.result_fundercount as select * from SOURCE.result_fundercount orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_fundercount stored as parquet as select * from SOURCE.result_fundercount orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_fundercount; -create table TARGET.result_gold as select * from SOURCE.result_gold orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_gold stored as parquet as select * from SOURCE.result_gold orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_gold; -create table TARGET.result_greenoa as select * from SOURCE.result_greenoa orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_greenoa stored as parquet as select * from SOURCE.result_greenoa orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_greenoa; -create table TARGET.result_languages as select * from SOURCE.result_languages orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_languages stored as parquet as select * from SOURCE.result_languages orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_languages; -create table TARGET.result_licences as select * from SOURCE.result_licenses orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_licences stored as parquet as select * from SOURCE.result_licenses orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_licences; -create table TARGET.result_oids as select * from SOURCE.result_oids orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_oids stored as parquet as select * from SOURCE.result_oids orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_oids; -create table TARGET.result_organization as select * from SOURCE.result_organization orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_organization stored as parquet as select * from SOURCE.result_organization orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_organization; -create table TARGET.result_peerreviewed as select * from SOURCE.result_peerreviewed orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_peerreviewed stored as parquet as select * from SOURCE.result_peerreviewed orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_peerreviewed; -create table TARGET.result_pids as select * from SOURCE.result_pids orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_pids stored as parquet as select * from SOURCE.result_pids orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_pids; -create table TARGET.result_projectcount as select * from SOURCE.result_projectcount orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_projectcount stored as parquet as select * from SOURCE.result_projectcount orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_projectcount; -create table TARGET.result_projects as select * from SOURCE.result_projects orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_projects stored as parquet as select * from SOURCE.result_projects orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_projects; -create table TARGET.result_refereed as select * from SOURCE.result_refereed orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_refereed stored as parquet as select * from SOURCE.result_refereed orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_refereed; -create table TARGET.result_sources as select * from SOURCE.result_sources orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_sources stored as parquet as select * from SOURCE.result_sources orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_sources; -create table TARGET.result_topics as select * from SOURCE.result_topics orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.result_topics stored as parquet as select * from SOURCE.result_topics orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.result_topics; -- datasources @@ -84,7 +84,7 @@ create view if not exists TARGET.datasource_oids as select * from SOURCE.datasou create view if not exists TARGET.datasource_organizations as select * from SOURCE.datasource_organizations; create view if not exists TARGET.datasource_sources as select * from SOURCE.datasource_sources; -create table TARGET.datasource_results as select id as result, datasource as id from TARGET.result_datasources; +create table TARGET.datasource_results stored as parquet as select id as result, datasource as id from TARGET.result_datasources; compute stats TARGET.datasource_results; -- organizations @@ -100,7 +100,7 @@ create view if not exists TARGET.project_oids as select * from SOURCE.project_oi create view if not exists TARGET.project_organizations as select * from SOURCE.project_organizations; create view if not exists TARGET.project_resultcount as select * from SOURCE.project_resultcount; -create table TARGET.project_results as select id as result, project as id from TARGET.result_projects; +create table TARGET.project_results stored as parquet as select id as result, project as id from TARGET.result_projects; compute stats TARGET.project_results; -- indicators @@ -121,19 +121,19 @@ create view TARGET.indi_pub_avg_year_content_oa as select * from SOURCE.indi_pub create view TARGET.indi_pub_avg_year_context_oa as select * from SOURCE.indi_pub_avg_year_context_oa orig; create view TARGET.indi_pub_avg_year_country_oa as select * from SOURCE.indi_pub_avg_year_country_oa orig; -create table TARGET.indi_pub_green_oa as select * from SOURCE.indi_pub_green_oa orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_green_oa stored as parquet as select * from SOURCE.indi_pub_green_oa orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_green_oa; -create table TARGET.indi_pub_grey_lit as select * from SOURCE.indi_pub_grey_lit orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_grey_lit stored as parquet as select * from SOURCE.indi_pub_grey_lit orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_grey_lit; -create table TARGET.indi_pub_doi_from_crossref as select * from SOURCE.indi_pub_doi_from_crossref orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_doi_from_crossref stored as parquet as select * from SOURCE.indi_pub_doi_from_crossref orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_doi_from_crossref; -create table TARGET.indi_pub_gold_oa as select * from SOURCE.indi_pub_gold_oa orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_gold_oa stored as parquet as select * from SOURCE.indi_pub_gold_oa orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_gold_oa; -create table TARGET.indi_pub_has_abstract as select * from SOURCE.indi_pub_has_abstract orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_has_abstract stored as parquet as select * from SOURCE.indi_pub_has_abstract orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_has_abstract; -create table TARGET.indi_pub_has_cc_licence as select * from SOURCE.indi_pub_has_cc_licence orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_has_cc_licence stored as parquet as select * from SOURCE.indi_pub_has_cc_licence orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_has_cc_licence; -create table TARGET.indi_pub_has_cc_licence_url as select * from SOURCE.indi_pub_has_cc_licence_url orig where exists (select 1 from TARGET.result r where r.id=orig.id); +create table TARGET.indi_pub_has_cc_licence_url stored as parquet as select * from SOURCE.indi_pub_has_cc_licence_url orig where exists (select 1 from TARGET.result r where r.id=orig.id); compute stats TARGET.indi_pub_has_cc_licence_url; create view TARGET.indi_software_avg_year_content_oa as select * from SOURCE.indi_software_avg_year_content_oa orig; @@ -143,15 +143,15 @@ create view TARGET.indi_software_avg_year_country_oa as select * from SOURCE.ind --denorm alter table TARGET.result rename to TARGET.res_tmp; -create table TARGET.result_denorm as +create table TARGET.result_denorm stored as parquet as select distinct r.*, rp.project, p.acronym as pacronym, p.title as ptitle, p.funder as pfunder, p.funding_lvl0 as pfunding_lvl0, rd.datasource, d.name as dname, d.type as dtype from TARGET.res_tmp r - join TARGET.result_projects rp on rp.id=r.id - join TARGET.result_datasources rd on rd.id=r.id - join TARGET.project p on p.id=rp.project - join TARGET.datasource d on d.id=rd.datasource; + left outer join TARGET.result_projects rp on rp.id=r.id + left outer join TARGET.result_datasources rd on rd.id=r.id + left outer join TARGET.project p on p.id=rp.project + left outer join TARGET.datasource d on d.id=rd.datasource; compute stats TARGET.result_denorm; alter table TARGET.result_denorm rename to TARGET.result; drop table TARGET.res_tmp; ---- done! +--- done! \ No newline at end of file