forked from D-Net/dnet-hadoop
refactoring
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@ -4,6 +4,11 @@ package eu.dnetlib.dhp.resulttoorganizationfrominstrepo;
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import static eu.dnetlib.dhp.PropagationConstant.*;
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import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkHiveSession;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.List;
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import java.util.Optional;
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import org.apache.commons.io.IOUtils;
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import org.apache.hadoop.io.compress.GzipCodec;
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import org.apache.spark.SparkConf;
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@ -22,11 +27,6 @@ import eu.dnetlib.dhp.schema.oaf.Datasource;
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import eu.dnetlib.dhp.schema.oaf.Organization;
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import eu.dnetlib.dhp.schema.oaf.Relation;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.List;
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import java.util.Optional;
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public class PrepareResultInstRepoAssociation {
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private static final Logger log = LoggerFactory.getLogger(PrepareResultInstRepoAssociation.class);
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@ -56,7 +56,8 @@ public class PrepareResultInstRepoAssociation {
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final String alreadyLinkedPath = parser.get("alreadyLinkedPath");
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log.info("alreadyLinkedPath {}: ", alreadyLinkedPath);
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List<String> blacklist = Optional.ofNullable(parser.get("blacklist"))
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List<String> blacklist = Optional
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.ofNullable(parser.get("blacklist"))
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.map(v -> Arrays.asList(v.split(";")))
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.orElse(new ArrayList<>());
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@ -98,7 +99,6 @@ public class PrepareResultInstRepoAssociation {
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}
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}
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String query = "SELECT source datasourceId, target organizationId "
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+ "FROM ( SELECT id "
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+ "FROM datasource "
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