From 901ae37f7b45466ddab4a5c958368ecf6fd239b2 Mon Sep 17 00:00:00 2001
From: "miriam.baglioni" <miriam.baglioni@isti.cnr.it>
Date: Mon, 3 Aug 2020 18:12:54 +0200
Subject: [PATCH] added step to workflow

---
 .../graph/dump_whole/oozie_app/workflow.xml   | 22 +++++++++++++++++++
 1 file changed, 22 insertions(+)

diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump_whole/oozie_app/workflow.xml b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump_whole/oozie_app/workflow.xml
index 6de190fde..00d75e897 100644
--- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump_whole/oozie_app/workflow.xml
+++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump_whole/oozie_app/workflow.xml
@@ -101,6 +101,17 @@
         <error to="Kill"/>
     </action>
 
+    <action name="save_community_map">
+        <java>
+            <main-class>eu.dnetlib.dhp.oa.graph.dump.community.SaveCommunityMap</main-class>
+            <arg>--outputPath</arg><arg>${workingDir}/communityMap</arg>
+            <arg>--nameNode</arg><arg>${nameNode}</arg>
+            <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
+        </java>
+        <ok to="fork_dump"/>
+        <error to="Kill"/>
+    </action>
+
     <fork name="fork_dump">
         <path start="dump_publication"/>
         <path start="dump_dataset"/>
@@ -132,6 +143,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/publication</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
             <arg>--outputPath</arg><arg>${workingDir}/result/publication</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -158,6 +170,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/dataset</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
             <arg>--outputPath</arg><arg>${workingDir}/result/dataset</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -184,6 +197,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
             <arg>--outputPath</arg><arg>${workingDir}/result/otherresearchproduct</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -210,6 +224,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/software</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
             <arg>--outputPath</arg><arg>${workingDir}/result/software</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -236,6 +251,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/organization</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Organization</arg>
             <arg>--outputPath</arg><arg>${outputPath}/organization</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -262,6 +278,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/project</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Project</arg>
             <arg>--outputPath</arg><arg>${outputPath}/project</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -288,6 +305,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/datasource</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Datasource</arg>
             <arg>--outputPath</arg><arg>${outputPath}/datasource</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_dump"/>
@@ -406,6 +424,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/publication</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
             <arg>--outputPath</arg><arg>${workingDir}/relation/publication</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_extract_relations"/>
@@ -432,6 +451,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/dataset</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
             <arg>--outputPath</arg><arg>${workingDir}/relation/dataset</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_extract_relations"/>
@@ -458,6 +478,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
             <arg>--outputPath</arg><arg>${workingDir}/relation/orp</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_extract_relations"/>
@@ -484,6 +505,7 @@
             <arg>--sourcePath</arg><arg>${sourcePath}/software</arg>
             <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
             <arg>--outputPath</arg><arg>${workingDir}/relation/software</arg>
+<!--            <arg>&#45;&#45;communityMapPath</arg><arg>${workingDir}/communityMap</arg>-->
             <arg>--isLookUpUrl</arg><arg>${isLookUpUrl}</arg>
         </spark>
         <ok to="join_extract_relations"/>