From c89166182238c14c97aea7b452ce2b3586400aa2 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 21 Apr 2020 18:52:23 +0200 Subject: [PATCH 01/17] small adjustments in the graph2hive workflow --- .../dnetlib/dhp/oa/graph/GraphHiveImporterJob.java | 12 +++++++----- .../dhp/oa/graph/hive/oozie_app/config-default.xml | 8 ++------ .../dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml | 12 ++++++------ 3 files changed, 15 insertions(+), 17 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java index d0fe95289..bec3810f9 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java @@ -19,6 +19,8 @@ public class GraphHiveImporterJob { private static final Logger log = LoggerFactory.getLogger(GraphHiveImporterJob.class); + private static final ObjectMapper OBJECT_MAPPER = new ObjectMapper(); + public static void main(String[] args) throws Exception { final ArgumentApplicationParser parser = @@ -37,12 +39,12 @@ public class GraphHiveImporterJob { String inputPath = parser.get("inputPath"); log.info("inputPath: {}", inputPath); - String hiveMetastoreUris = parser.get("hiveMetastoreUris"); - log.info("hiveMetastoreUris: {}", hiveMetastoreUris); - String hiveDbName = parser.get("hiveDbName"); log.info("hiveDbName: {}", hiveDbName); + String hiveMetastoreUris = parser.get("hiveMetastoreUris"); + log.info("hiveMetastoreUris: {}", hiveMetastoreUris); + SparkConf conf = new SparkConf(); conf.set("hive.metastore.uris", hiveMetastoreUris); @@ -58,13 +60,13 @@ public class GraphHiveImporterJob { spark.sql(String.format("DROP DATABASE IF EXISTS %s CASCADE", hiveDbName)); spark.sql(String.format("CREATE DATABASE IF NOT EXISTS %s", hiveDbName)); - final JavaSparkContext sc = new JavaSparkContext(spark.sparkContext()); + final JavaSparkContext sc = JavaSparkContext.fromSparkContext(spark.sparkContext()); // Read the input file and convert it into RDD of serializable object ModelSupport.oafTypes.forEach( (name, clazz) -> spark.createDataset( sc.textFile(inputPath + "/" + name) - .map(s -> new ObjectMapper().readValue(s, clazz)) + .map(s -> OBJECT_MAPPER.readValue(s, clazz)) .rdd(), Encoders.bean(clazz)) .write() diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml index 8d8766283..2c9a92d7a 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml @@ -12,11 +12,7 @@ true - oozie.action.sharelib.for.spark - spark2 - - - hive_metastore_uris + hiveMetastoreUris thrift://iis-cdh5-test-m3.ocean.icm.edu.pl:9083 @@ -24,7 +20,7 @@ jdbc:hive2://iis-cdh5-test-m3.ocean.icm.edu.pl:10000 - hive_db_name + hiveDbName openaire \ No newline at end of file diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml index 67ca6a64a..4e9e95c83 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml @@ -2,11 +2,11 @@ - sourcePath + inputPath the source path - hive_db_name + hiveDbName the target hive database name @@ -87,9 +87,9 @@ --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} - --sourcePath${sourcePath} - --hive_db_name${hive_db_name} - --hive_metastore_uris${hive_metastore_uris} + --inputPath${inputPath} + --hiveDbName${hiveDbName} + --hiveMetastoreUris${hiveMetastoreUris} @@ -102,7 +102,7 @@ hive.metastore.uris - ${hive_metastore_uris} + ${hiveMetastoreUris} ${hive_jdbc_url}/${hive_db_name} From 9e4d58f505533cc42abc24d17b984a26de012f27 Mon Sep 17 00:00:00 2001 From: "michele.artini" Date: Wed, 22 Apr 2020 10:07:26 +0200 Subject: [PATCH 02/17] ResultType --- .../raw/AbstractMdRecordToOafMapper.java | 840 +++++++------- .../raw/MigrateDbEntitiesApplication.java | 1000 ++++++++--------- .../graph/raw/common/MigrationConstants.java | 22 + 3 files changed, 889 insertions(+), 973 deletions(-) create mode 100644 dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java index a7aa600cf..5374a69e8 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java @@ -10,6 +10,20 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.oaiIProvenance; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Date; +import java.util.HashMap; +import java.util.List; +import java.util.Map; + +import org.apache.commons.lang3.StringUtils; +import org.dom4j.Document; +import org.dom4j.DocumentFactory; +import org.dom4j.DocumentHelper; +import org.dom4j.Node; + +import eu.dnetlib.dhp.oa.graph.raw.common.MigrationConstants; import eu.dnetlib.dhp.schema.oaf.Author; import eu.dnetlib.dhp.schema.oaf.DataInfo; import eu.dnetlib.dhp.schema.oaf.Dataset; @@ -27,452 +41,388 @@ import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Result; import eu.dnetlib.dhp.schema.oaf.Software; import eu.dnetlib.dhp.schema.oaf.StructuredProperty; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.HashMap; -import java.util.List; -import java.util.Map; -import org.apache.commons.lang3.StringUtils; -import org.dom4j.Document; -import org.dom4j.DocumentFactory; -import org.dom4j.DocumentHelper; -import org.dom4j.Node; public abstract class AbstractMdRecordToOafMapper { - protected final Map code2name; - - protected static final Qualifier MAIN_TITLE_QUALIFIER = - qualifier("main title", "main title", "dnet:dataCite_title", "dnet:dataCite_title"); - - protected static final Qualifier PUBLICATION_RESULTTYPE_QUALIFIER = - qualifier( - "publication", - "publication", - "dnet:result_typologies", - "dnet:result_typologies"); - protected static final Qualifier DATASET_RESULTTYPE_QUALIFIER = - qualifier("dataset", "dataset", "dnet:result_typologies", "dnet:result_typologies"); - protected static final Qualifier SOFTWARE_RESULTTYPE_QUALIFIER = - qualifier("software", "software", "dnet:result_typologies", "dnet:result_typologies"); - protected static final Qualifier OTHER_RESULTTYPE_QUALIFIER = - qualifier("other", "other", "dnet:result_typologies", "dnet:result_typologies"); - protected static final Qualifier REPOSITORY_QUALIFIER = - qualifier( - "sysimport:crosswalk:repository", - "sysimport:crosswalk:repository", - "dnet:provenanceActions", - "dnet:provenanceActions"); - - protected AbstractMdRecordToOafMapper(final Map code2name) { - this.code2name = code2name; - } - - public List processMdRecord(final String xml) { - try { - final Map nsContext = new HashMap<>(); - nsContext.put("dr", "http://www.driver-repository.eu/namespace/dr"); - nsContext.put("dri", "http://www.driver-repository.eu/namespace/dri"); - nsContext.put("oaf", "http://namespace.openaire.eu/oaf"); - nsContext.put("oai", "http://www.openarchives.org/OAI/2.0/"); - nsContext.put("prov", "http://www.openarchives.org/OAI/2.0/provenance"); - nsContext.put("dc", "http://purl.org/dc/elements/1.1/"); - nsContext.put("datacite", "http://datacite.org/schema/kernel-3"); - DocumentFactory.getInstance().setXPathNamespaceURIs(nsContext); - - final Document doc = - DocumentHelper.parseText( - xml.replaceAll( - "http://datacite.org/schema/kernel-4", - "http://datacite.org/schema/kernel-3")); - - final String type = doc.valueOf("//dr:CobjCategory/@type"); - final KeyValue collectedFrom = - keyValue( - createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), - doc.valueOf("//oaf:collectedFrom/@name")); - final KeyValue hostedBy = - StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id")) - ? collectedFrom - : keyValue( - createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), - doc.valueOf("//oaf:hostedBy/@name")); - - final DataInfo info = prepareDataInfo(doc); - final long lastUpdateTimestamp = new Date().getTime(); - - return createOafs(doc, type, collectedFrom, hostedBy, info, lastUpdateTimestamp); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - protected List createOafs( - final Document doc, - final String type, - final KeyValue collectedFrom, - final KeyValue hostedBy, - final DataInfo info, - final long lastUpdateTimestamp) { - - final List oafs = new ArrayList<>(); - - switch (type.toLowerCase()) { - case "": - case "publication": - final Publication p = new Publication(); - populateResultFields(p, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - p.setResulttype(PUBLICATION_RESULTTYPE_QUALIFIER); - p.setJournal(prepareJournal(doc, info)); - oafs.add(p); - break; - case "dataset": - final Dataset d = new Dataset(); - populateResultFields(d, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - d.setResulttype(DATASET_RESULTTYPE_QUALIFIER); - d.setStoragedate(prepareDatasetStorageDate(doc, info)); - d.setDevice(prepareDatasetDevice(doc, info)); - d.setSize(prepareDatasetSize(doc, info)); - d.setVersion(prepareDatasetVersion(doc, info)); - d.setLastmetadataupdate(prepareDatasetLastMetadataUpdate(doc, info)); - d.setMetadataversionnumber(prepareDatasetMetadataVersionNumber(doc, info)); - d.setGeolocation(prepareDatasetGeoLocations(doc, info)); - oafs.add(d); - break; - case "software": - final Software s = new Software(); - populateResultFields(s, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - s.setResulttype(SOFTWARE_RESULTTYPE_QUALIFIER); - s.setDocumentationUrl(prepareSoftwareDocumentationUrls(doc, info)); - s.setLicense(prepareSoftwareLicenses(doc, info)); - s.setCodeRepositoryUrl(prepareSoftwareCodeRepositoryUrl(doc, info)); - s.setProgrammingLanguage(prepareSoftwareProgrammingLanguage(doc, info)); - oafs.add(s); - break; - case "otherresearchproducts": - default: - final OtherResearchProduct o = new OtherResearchProduct(); - populateResultFields(o, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - o.setResulttype(OTHER_RESULTTYPE_QUALIFIER); - o.setContactperson(prepareOtherResearchProductContactPersons(doc, info)); - o.setContactgroup(prepareOtherResearchProductContactGroups(doc, info)); - o.setTool(prepareOtherResearchProductTools(doc, info)); - oafs.add(o); - break; - } - - if (!oafs.isEmpty()) { - oafs.addAll(addProjectRels(doc, collectedFrom, info, lastUpdateTimestamp)); - oafs.addAll(addOtherResultRels(doc, collectedFrom, info, lastUpdateTimestamp)); - } - - return oafs; - } - - private List addProjectRels( - final Document doc, - final KeyValue collectedFrom, - final DataInfo info, - final long lastUpdateTimestamp) { - - final List res = new ArrayList<>(); - - final String docId = createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false); - - for (final Object o : doc.selectNodes("//oaf:projectid")) { - final String projectId = createOpenaireId(40, ((Node) o).getText(), true); - - final Relation r1 = new Relation(); - r1.setRelType("resultProject"); - r1.setSubRelType("outcome"); - r1.setRelClass("isProducedBy"); - r1.setSource(docId); - r1.setTarget(projectId); - r1.setCollectedfrom(Arrays.asList(collectedFrom)); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - res.add(r1); - - final Relation r2 = new Relation(); - r2.setRelType("resultProject"); - r2.setSubRelType("outcome"); - r2.setRelClass("produces"); - r2.setSource(projectId); - r2.setTarget(docId); - r2.setCollectedfrom(Arrays.asList(collectedFrom)); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - res.add(r2); - } - - return res; - } - - protected abstract List addOtherResultRels( - final Document doc, - final KeyValue collectedFrom, - final DataInfo info, - final long lastUpdateTimestamp); - - private void populateResultFields( - final Result r, - final Document doc, - final KeyValue collectedFrom, - final KeyValue hostedBy, - final DataInfo info, - final long lastUpdateTimestamp) { - r.setDataInfo(info); - r.setLastupdatetimestamp(lastUpdateTimestamp); - r.setId(createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false)); - r.setOriginalId(Arrays.asList(doc.valueOf("//dri:objIdentifier"))); - r.setCollectedfrom(Arrays.asList(collectedFrom)); - r.setPid( - prepareListStructProps( - doc, - "//oaf:identifier", - "@identifierType", - "dnet:pid_types", - "dnet:pid_types", - info)); - r.setDateofcollection(doc.valueOf("//dr:dateOfCollection")); - r.setDateoftransformation(doc.valueOf("//dr:dateOfTransformation")); - r.setExtraInfo(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setOaiprovenance(prepareOAIprovenance(doc)); - r.setAuthor(prepareAuthors(doc, info)); - r.setLanguage(prepareLanguages(doc)); - r.setCountry(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setSubject(prepareSubjects(doc, info)); - r.setTitle(prepareTitles(doc, info)); - r.setRelevantdate(prepareRelevantDates(doc, info)); - r.setDescription(prepareDescriptions(doc, info)); - r.setDateofacceptance(prepareField(doc, "//oaf:dateAccepted", info)); - r.setPublisher(preparePublisher(doc, info)); - r.setEmbargoenddate(prepareField(doc, "//oaf:embargoenddate", info)); - r.setSource(prepareSources(doc, info)); - r.setFulltext(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setFormat(prepareFormats(doc, info)); - r.setContributor(prepareContributors(doc, info)); - r.setResourcetype(prepareResourceType(doc, info)); - r.setCoverage(prepareCoverages(doc, info)); - r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); - } - - protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); - - protected abstract List prepareInstances( - Document doc, DataInfo info, KeyValue collectedfrom, KeyValue hostedby); - - protected abstract List> prepareSources(Document doc, DataInfo info); - - protected abstract List prepareRelevantDates(Document doc, DataInfo info); - - protected abstract List> prepareCoverages(Document doc, DataInfo info); - - protected abstract List> prepareContributors(Document doc, DataInfo info); - - protected abstract List> prepareFormats(Document doc, DataInfo info); - - protected abstract Field preparePublisher(Document doc, DataInfo info); - - protected abstract List> prepareDescriptions(Document doc, DataInfo info); - - protected abstract List prepareTitles(Document doc, DataInfo info); - - protected abstract List prepareSubjects(Document doc, DataInfo info); - - protected abstract Qualifier prepareLanguages(Document doc); - - protected abstract List prepareAuthors(Document doc, DataInfo info); - - protected abstract List> prepareOtherResearchProductTools( - Document doc, DataInfo info); - - protected abstract List> prepareOtherResearchProductContactGroups( - Document doc, DataInfo info); - - protected abstract List> prepareOtherResearchProductContactPersons( - Document doc, DataInfo info); - - protected abstract Qualifier prepareSoftwareProgrammingLanguage(Document doc, DataInfo info); - - protected abstract Field prepareSoftwareCodeRepositoryUrl(Document doc, DataInfo info); - - protected abstract List prepareSoftwareLicenses( - Document doc, DataInfo info); - - protected abstract List> prepareSoftwareDocumentationUrls( - Document doc, DataInfo info); - - protected abstract List prepareDatasetGeoLocations(Document doc, DataInfo info); - - protected abstract Field prepareDatasetMetadataVersionNumber( - Document doc, DataInfo info); - - protected abstract Field prepareDatasetLastMetadataUpdate(Document doc, DataInfo info); - - protected abstract Field prepareDatasetVersion(Document doc, DataInfo info); - - protected abstract Field prepareDatasetSize(Document doc, DataInfo info); - - protected abstract Field prepareDatasetDevice(Document doc, DataInfo info); - - protected abstract Field prepareDatasetStorageDate(Document doc, DataInfo info); - - private Journal prepareJournal(final Document doc, final DataInfo info) { - final Node n = doc.selectSingleNode("//oaf:journal"); - if (n != null) { - final String name = n.getText(); - final String issnPrinted = n.valueOf("@issn"); - final String issnOnline = n.valueOf("@eissn"); - final String issnLinking = n.valueOf("@lissn"); - final String ep = n.valueOf("@ep"); - final String iss = n.valueOf("@iss"); - final String sp = n.valueOf("@sp"); - final String vol = n.valueOf("@vol"); - final String edition = n.valueOf("@edition"); - if (StringUtils.isNotBlank(name)) { - return journal( - name, - issnPrinted, - issnOnline, - issnLinking, - ep, - iss, - sp, - vol, - edition, - null, - null, - info); - } - } - return null; - } - - protected Qualifier prepareQualifier( - final Node node, final String xpath, final String schemeId, final String schemeName) { - final String classId = node.valueOf(xpath); - final String className = code2name.get(classId); - return qualifier(classId, className, schemeId, schemeName); - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final String xpathClassId, - final String schemeId, - final String schemeName, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - final String classId = n.valueOf(xpathClassId); - final String className = code2name.get(classId); - res.add( - structuredProperty( - n.getText(), classId, className, schemeId, schemeName, info)); - } - return res; - } - - protected List prepareListStructProps( - final Node node, final String xpath, final Qualifier qualifier, final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - res.add(structuredProperty(n.getText(), qualifier, info)); - } - return res; - } - - protected List prepareListStructProps( - final Node node, final String xpath, final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - res.add( - structuredProperty( - n.getText(), - n.valueOf("@classid"), - n.valueOf("@classname"), - n.valueOf("@schemeid"), - n.valueOf("@schemename"), - info)); - } - return res; - } - - protected OAIProvenance prepareOAIprovenance(final Document doc) { - final Node n = - doc.selectSingleNode( - "//*[local-name()='provenance']/*[local-name()='originDescription']"); - - if (n == null) { - return null; - } - - final String identifier = n.valueOf("./*[local-name()='identifier']"); - final String baseURL = n.valueOf("./*[local-name()='baseURL']"); - ; - final String metadataNamespace = n.valueOf("./*[local-name()='metadataNamespace']"); - ; - final boolean altered = n.valueOf("@altered").equalsIgnoreCase("true"); - final String datestamp = n.valueOf("./*[local-name()='datestamp']"); - ; - final String harvestDate = n.valueOf("@harvestDate"); - ; - - return oaiIProvenance( - identifier, baseURL, metadataNamespace, altered, datestamp, harvestDate); - } - - protected DataInfo prepareDataInfo(final Document doc) { - final Node n = doc.selectSingleNode("//oaf:datainfo"); - - if (n == null) { - return dataInfo(false, null, false, false, REPOSITORY_QUALIFIER, "0.9"); - } - - final String paClassId = n.valueOf("./oaf:provenanceaction/@classid"); - final String paClassName = n.valueOf("./oaf:provenanceaction/@classname"); - final String paSchemeId = n.valueOf("./oaf:provenanceaction/@schemeid"); - final String paSchemeName = n.valueOf("./oaf:provenanceaction/@schemename"); - - final boolean deletedbyinference = - Boolean.parseBoolean(n.valueOf("./oaf:deletedbyinference")); - final String inferenceprovenance = n.valueOf("./oaf:inferenceprovenance"); - final Boolean inferred = Boolean.parseBoolean(n.valueOf("./oaf:inferred")); - final String trust = n.valueOf("./oaf:trust"); - - return dataInfo( - deletedbyinference, - inferenceprovenance, - inferred, - false, - qualifier(paClassId, paClassName, paSchemeId, paSchemeName), - trust); - } - - protected Field prepareField(final Node node, final String xpath, final DataInfo info) { - return field(node.valueOf(xpath), info); - } - - protected List> prepareListFields( - final Node node, final String xpath, final DataInfo info) { - return listFields(info, prepareListString(node, xpath)); - } - - protected List prepareListString(final Node node, final String xpath) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final String s = ((Node) o).getText().trim(); - if (StringUtils.isNotBlank(s)) { - res.add(s); - } - } - return res; - } + protected final Map code2name; + + protected static final Qualifier MAIN_TITLE_QUALIFIER = + qualifier("main title", "main title", "dnet:dataCite_title", "dnet:dataCite_title"); + + protected AbstractMdRecordToOafMapper(final Map code2name) { + this.code2name = code2name; + } + + public List processMdRecord(final String xml) { + try { + final Map nsContext = new HashMap<>(); + nsContext.put("dr", "http://www.driver-repository.eu/namespace/dr"); + nsContext.put("dri", "http://www.driver-repository.eu/namespace/dri"); + nsContext.put("oaf", "http://namespace.openaire.eu/oaf"); + nsContext.put("oai", "http://www.openarchives.org/OAI/2.0/"); + nsContext.put("prov", "http://www.openarchives.org/OAI/2.0/provenance"); + nsContext.put("dc", "http://purl.org/dc/elements/1.1/"); + nsContext.put("datacite", "http://datacite.org/schema/kernel-3"); + DocumentFactory.getInstance().setXPathNamespaceURIs(nsContext); + + final Document doc = + DocumentHelper.parseText(xml.replaceAll("http://datacite.org/schema/kernel-4", "http://datacite.org/schema/kernel-3")); + + final String type = doc.valueOf("//dr:CobjCategory/@type"); + final KeyValue collectedFrom = + keyValue(createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), doc.valueOf("//oaf:collectedFrom/@name")); + final KeyValue hostedBy = + StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id")) + ? collectedFrom + : keyValue(createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), doc.valueOf("//oaf:hostedBy/@name")); + + final DataInfo info = prepareDataInfo(doc); + final long lastUpdateTimestamp = new Date().getTime(); + + return createOafs(doc, type, collectedFrom, hostedBy, info, lastUpdateTimestamp); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + protected List createOafs( + final Document doc, + final String type, + final KeyValue collectedFrom, + final KeyValue hostedBy, + final DataInfo info, + final long lastUpdateTimestamp) { + + final List oafs = new ArrayList<>(); + + switch (type.toLowerCase()) { + case "": + case "publication": + final Publication p = new Publication(); + populateResultFields(p, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + p.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); + p.setJournal(prepareJournal(doc, info)); + oafs.add(p); + break; + case "dataset": + final Dataset d = new Dataset(); + populateResultFields(d, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + d.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); + d.setStoragedate(prepareDatasetStorageDate(doc, info)); + d.setDevice(prepareDatasetDevice(doc, info)); + d.setSize(prepareDatasetSize(doc, info)); + d.setVersion(prepareDatasetVersion(doc, info)); + d.setLastmetadataupdate(prepareDatasetLastMetadataUpdate(doc, info)); + d.setMetadataversionnumber(prepareDatasetMetadataVersionNumber(doc, info)); + d.setGeolocation(prepareDatasetGeoLocations(doc, info)); + oafs.add(d); + break; + case "software": + final Software s = new Software(); + populateResultFields(s, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + s.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); + s.setDocumentationUrl(prepareSoftwareDocumentationUrls(doc, info)); + s.setLicense(prepareSoftwareLicenses(doc, info)); + s.setCodeRepositoryUrl(prepareSoftwareCodeRepositoryUrl(doc, info)); + s.setProgrammingLanguage(prepareSoftwareProgrammingLanguage(doc, info)); + oafs.add(s); + break; + case "otherresearchproducts": + default: + final OtherResearchProduct o = new OtherResearchProduct(); + populateResultFields(o, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + o.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); + o.setContactperson(prepareOtherResearchProductContactPersons(doc, info)); + o.setContactgroup(prepareOtherResearchProductContactGroups(doc, info)); + o.setTool(prepareOtherResearchProductTools(doc, info)); + oafs.add(o); + break; + } + + if (!oafs.isEmpty()) { + oafs.addAll(addProjectRels(doc, collectedFrom, info, lastUpdateTimestamp)); + oafs.addAll(addOtherResultRels(doc, collectedFrom, info, lastUpdateTimestamp)); + } + + return oafs; + } + + private List addProjectRels( + final Document doc, + final KeyValue collectedFrom, + final DataInfo info, + final long lastUpdateTimestamp) { + + final List res = new ArrayList<>(); + + final String docId = createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false); + + for (final Object o : doc.selectNodes("//oaf:projectid")) { + final String projectId = createOpenaireId(40, ((Node) o).getText(), true); + + final Relation r1 = new Relation(); + r1.setRelType("resultProject"); + r1.setSubRelType("outcome"); + r1.setRelClass("isProducedBy"); + r1.setSource(docId); + r1.setTarget(projectId); + r1.setCollectedfrom(Arrays.asList(collectedFrom)); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + res.add(r1); + + final Relation r2 = new Relation(); + r2.setRelType("resultProject"); + r2.setSubRelType("outcome"); + r2.setRelClass("produces"); + r2.setSource(projectId); + r2.setTarget(docId); + r2.setCollectedfrom(Arrays.asList(collectedFrom)); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + res.add(r2); + } + + return res; + } + + protected abstract List addOtherResultRels( + final Document doc, + final KeyValue collectedFrom, + final DataInfo info, + final long lastUpdateTimestamp); + + private void populateResultFields( + final Result r, + final Document doc, + final KeyValue collectedFrom, + final KeyValue hostedBy, + final DataInfo info, + final long lastUpdateTimestamp) { + r.setDataInfo(info); + r.setLastupdatetimestamp(lastUpdateTimestamp); + r.setId(createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false)); + r.setOriginalId(Arrays.asList(doc.valueOf("//dri:objIdentifier"))); + r.setCollectedfrom(Arrays.asList(collectedFrom)); + r.setPid(prepareListStructProps(doc, "//oaf:identifier", "@identifierType", "dnet:pid_types", "dnet:pid_types", info)); + r.setDateofcollection(doc.valueOf("//dr:dateOfCollection")); + r.setDateoftransformation(doc.valueOf("//dr:dateOfTransformation")); + r.setExtraInfo(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setOaiprovenance(prepareOAIprovenance(doc)); + r.setAuthor(prepareAuthors(doc, info)); + r.setLanguage(prepareLanguages(doc)); + r.setCountry(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setSubject(prepareSubjects(doc, info)); + r.setTitle(prepareTitles(doc, info)); + r.setRelevantdate(prepareRelevantDates(doc, info)); + r.setDescription(prepareDescriptions(doc, info)); + r.setDateofacceptance(prepareField(doc, "//oaf:dateAccepted", info)); + r.setPublisher(preparePublisher(doc, info)); + r.setEmbargoenddate(prepareField(doc, "//oaf:embargoenddate", info)); + r.setSource(prepareSources(doc, info)); + r.setFulltext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setFormat(prepareFormats(doc, info)); + r.setContributor(prepareContributors(doc, info)); + r.setResourcetype(prepareResourceType(doc, info)); + r.setCoverage(prepareCoverages(doc, info)); + r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); + } + + protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); + + protected abstract List prepareInstances( + Document doc, + DataInfo info, + KeyValue collectedfrom, + KeyValue hostedby); + + protected abstract List> prepareSources(Document doc, DataInfo info); + + protected abstract List prepareRelevantDates(Document doc, DataInfo info); + + protected abstract List> prepareCoverages(Document doc, DataInfo info); + + protected abstract List> prepareContributors(Document doc, DataInfo info); + + protected abstract List> prepareFormats(Document doc, DataInfo info); + + protected abstract Field preparePublisher(Document doc, DataInfo info); + + protected abstract List> prepareDescriptions(Document doc, DataInfo info); + + protected abstract List prepareTitles(Document doc, DataInfo info); + + protected abstract List prepareSubjects(Document doc, DataInfo info); + + protected abstract Qualifier prepareLanguages(Document doc); + + protected abstract List prepareAuthors(Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductTools( + Document doc, + DataInfo info); + + protected abstract List> prepareOtherResearchProductContactGroups( + Document doc, + DataInfo info); + + protected abstract List> prepareOtherResearchProductContactPersons( + Document doc, + DataInfo info); + + protected abstract Qualifier prepareSoftwareProgrammingLanguage(Document doc, DataInfo info); + + protected abstract Field prepareSoftwareCodeRepositoryUrl(Document doc, DataInfo info); + + protected abstract List prepareSoftwareLicenses( + Document doc, + DataInfo info); + + protected abstract List> prepareSoftwareDocumentationUrls( + Document doc, + DataInfo info); + + protected abstract List prepareDatasetGeoLocations(Document doc, DataInfo info); + + protected abstract Field prepareDatasetMetadataVersionNumber( + Document doc, + DataInfo info); + + protected abstract Field prepareDatasetLastMetadataUpdate(Document doc, DataInfo info); + + protected abstract Field prepareDatasetVersion(Document doc, DataInfo info); + + protected abstract Field prepareDatasetSize(Document doc, DataInfo info); + + protected abstract Field prepareDatasetDevice(Document doc, DataInfo info); + + protected abstract Field prepareDatasetStorageDate(Document doc, DataInfo info); + + private Journal prepareJournal(final Document doc, final DataInfo info) { + final Node n = doc.selectSingleNode("//oaf:journal"); + if (n != null) { + final String name = n.getText(); + final String issnPrinted = n.valueOf("@issn"); + final String issnOnline = n.valueOf("@eissn"); + final String issnLinking = n.valueOf("@lissn"); + final String ep = n.valueOf("@ep"); + final String iss = n.valueOf("@iss"); + final String sp = n.valueOf("@sp"); + final String vol = n.valueOf("@vol"); + final String edition = n.valueOf("@edition"); + if (StringUtils.isNotBlank(name)) { return journal(name, issnPrinted, issnOnline, issnLinking, ep, iss, sp, vol, edition, null, null, info); } + } + return null; + } + + protected Qualifier prepareQualifier( + final Node node, + final String xpath, + final String schemeId, + final String schemeName) { + final String classId = node.valueOf(xpath); + final String className = code2name.get(classId); + return qualifier(classId, className, schemeId, schemeName); + } + + protected List prepareListStructProps( + final Node node, + final String xpath, + final String xpathClassId, + final String schemeId, + final String schemeName, + final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + final String classId = n.valueOf(xpathClassId); + final String className = code2name.get(classId); + res.add(structuredProperty(n.getText(), classId, className, schemeId, schemeName, info)); + } + return res; + } + + protected List prepareListStructProps( + final Node node, + final String xpath, + final Qualifier qualifier, + final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + res.add(structuredProperty(n.getText(), qualifier, info)); + } + return res; + } + + protected List prepareListStructProps( + final Node node, + final String xpath, + final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + res.add(structuredProperty(n.getText(), n.valueOf("@classid"), n.valueOf("@classname"), n.valueOf("@schemeid"), n.valueOf("@schemename"), info)); + } + return res; + } + + protected OAIProvenance prepareOAIprovenance(final Document doc) { + final Node n = + doc.selectSingleNode("//*[local-name()='provenance']/*[local-name()='originDescription']"); + + if (n == null) { return null; } + + final String identifier = n.valueOf("./*[local-name()='identifier']"); + final String baseURL = n.valueOf("./*[local-name()='baseURL']");; + final String metadataNamespace = n.valueOf("./*[local-name()='metadataNamespace']");; + final boolean altered = n.valueOf("@altered").equalsIgnoreCase("true"); + final String datestamp = n.valueOf("./*[local-name()='datestamp']");; + final String harvestDate = n.valueOf("@harvestDate");; + + return oaiIProvenance(identifier, baseURL, metadataNamespace, altered, datestamp, harvestDate); + } + + protected DataInfo prepareDataInfo(final Document doc) { + final Node n = doc.selectSingleNode("//oaf:datainfo"); + + if (n == null) { return dataInfo(false, null, false, false, MigrationConstants.REPOSITORY_PROVENANCE_ACTIONS, "0.9"); } + + final String paClassId = n.valueOf("./oaf:provenanceaction/@classid"); + final String paClassName = n.valueOf("./oaf:provenanceaction/@classname"); + final String paSchemeId = n.valueOf("./oaf:provenanceaction/@schemeid"); + final String paSchemeName = n.valueOf("./oaf:provenanceaction/@schemename"); + + final boolean deletedbyinference = + Boolean.parseBoolean(n.valueOf("./oaf:deletedbyinference")); + final String inferenceprovenance = n.valueOf("./oaf:inferenceprovenance"); + final Boolean inferred = Boolean.parseBoolean(n.valueOf("./oaf:inferred")); + final String trust = n.valueOf("./oaf:trust"); + + return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, qualifier(paClassId, paClassName, paSchemeId, paSchemeName), trust); + } + + protected Field prepareField(final Node node, final String xpath, final DataInfo info) { + return field(node.valueOf(xpath), info); + } + + protected List> prepareListFields( + final Node node, + final String xpath, + final DataInfo info) { + return listFields(info, prepareListString(node, xpath)); + } + + protected List prepareListString(final Node node, final String xpath) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final String s = ((Node) o).getText().trim(); + if (StringUtils.isNotBlank(s)) { + res.add(s); + } + } + return res; + } } diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java index 476e617d7..eb3a6a8c7 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java @@ -10,9 +10,27 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.listKeyValues; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; +import java.io.Closeable; +import java.io.IOException; +import java.sql.Array; +import java.sql.ResultSet; +import java.sql.SQLException; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Date; +import java.util.List; +import java.util.function.Consumer; +import java.util.function.Function; + +import org.apache.commons.io.IOUtils; +import org.apache.commons.lang3.StringUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; + import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.oa.graph.raw.common.AbstractMigrationApplication; import eu.dnetlib.dhp.oa.graph.raw.common.DbClient; +import eu.dnetlib.dhp.oa.graph.raw.common.MigrationConstants; import eu.dnetlib.dhp.schema.oaf.Context; import eu.dnetlib.dhp.schema.oaf.DataInfo; import eu.dnetlib.dhp.schema.oaf.Dataset; @@ -30,534 +48,460 @@ import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Result; import eu.dnetlib.dhp.schema.oaf.Software; import eu.dnetlib.dhp.schema.oaf.StructuredProperty; -import java.io.Closeable; -import java.io.IOException; -import java.sql.Array; -import java.sql.ResultSet; -import java.sql.SQLException; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.List; -import java.util.function.Consumer; -import java.util.function.Function; -import org.apache.commons.io.IOUtils; -import org.apache.commons.lang3.StringUtils; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; public class MigrateDbEntitiesApplication extends AbstractMigrationApplication - implements Closeable { - - private static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = - qualifier( - "sysimport:crosswalk:entityregistry", - "sysimport:crosswalk:entityregistry", - "dnet:provenance_actions", - "dnet:provenance_actions"); - - private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class); - - private final DbClient dbClient; - - private final long lastUpdateTimestamp; - - public static void main(final String[] args) throws Exception { - final ArgumentApplicationParser parser = - new ArgumentApplicationParser( - IOUtils.toString( - MigrateDbEntitiesApplication.class.getResourceAsStream( - "/eu/dnetlib/dhp/oa/graph/migrate_db_entities_parameters.json"))); - - parser.parseArgument(args); - - final String dbUrl = parser.get("postgresUrl"); - final String dbUser = parser.get("postgresUser"); - final String dbPassword = parser.get("postgresPassword"); - - final String hdfsPath = parser.get("hdfsPath"); - - final boolean processClaims = - parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims"); - - try (final MigrateDbEntitiesApplication smdbe = - new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser, dbPassword)) { - if (processClaims) { - log.info("Processing claims..."); - smdbe.execute("queryClaims.sql", smdbe::processClaims); - } else { - log.info("Processing datasources..."); - smdbe.execute("queryDatasources.sql", smdbe::processDatasource); - - log.info("Processing projects..."); - smdbe.execute("queryProjects.sql", smdbe::processProject); - - log.info("Processing orgs..."); - smdbe.execute("queryOrganizations.sql", smdbe::processOrganization); - - log.info("Processing relations ds <-> orgs ..."); - smdbe.execute( - "queryDatasourceOrganization.sql", smdbe::processDatasourceOrganization); - - log.info("Processing projects <-> orgs ..."); - smdbe.execute("queryProjectOrganization.sql", smdbe::processProjectOrganization); - } - log.info("All done."); - } - } - - protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST - super(); - this.dbClient = null; - this.lastUpdateTimestamp = new Date().getTime(); - } - - public MigrateDbEntitiesApplication( - final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword) - throws Exception { - super(hdfsPath); - this.dbClient = new DbClient(dbUrl, dbUser, dbPassword); - this.lastUpdateTimestamp = new Date().getTime(); - } - - public void execute(final String sqlFile, final Function> producer) - throws Exception { - final String sql = - IOUtils.toString( - getClass().getResourceAsStream("/eu/dnetlib/dhp/oa/graph/sql/" + sqlFile)); - - final Consumer consumer = rs -> producer.apply(rs).forEach(oaf -> emitOaf(oaf)); - - dbClient.processResults(sql, consumer); - } - - public List processDatasource(final ResultSet rs) { - - try { - - final DataInfo info = prepareDataInfo(rs); - - final Datasource ds = new Datasource(); - - ds.setId(createOpenaireId(10, rs.getString("datasourceid"), true)); - ds.setOriginalId(Arrays.asList(rs.getString("datasourceid"))); - ds.setCollectedfrom( - listKeyValues( - createOpenaireId(10, rs.getString("collectedfromid"), true), - rs.getString("collectedfromname"))); - ds.setPid(new ArrayList<>()); - ds.setDateofcollection(asString(rs.getDate("dateofcollection"))); - ds.setDateoftransformation(null); // Value not returned by the SQL query - ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB - ds.setOaiprovenance(null); // Values not present in the DB - ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype"))); - ds.setOpenairecompatibility( - prepareQualifierSplitting(rs.getString("openairecompatibility"))); - ds.setOfficialname(field(rs.getString("officialname"), info)); - ds.setEnglishname(field(rs.getString("englishname"), info)); - ds.setWebsiteurl(field(rs.getString("websiteurl"), info)); - ds.setLogourl(field(rs.getString("logourl"), info)); - ds.setContactemail(field(rs.getString("contactemail"), info)); - ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info)); - ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info)); - ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info)); - ds.setDateofvalidation(field(asString(rs.getDate("dateofvalidation")), info)); - ds.setDescription(field(rs.getString("description"), info)); - ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); - ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info)); - ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info)); - ds.setOdpolicies(field(rs.getString("odpolicies"), info)); - ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info)); - ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info)); - ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info)); - ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info)); - ds.setReleaseenddate(field(asString(rs.getDate("releaseenddate")), info)); - ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info)); - ds.setDataprovider(field(rs.getBoolean("dataprovider"), info)); - ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info)); - ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info)); - ds.setDatauploadtype(field(rs.getString("datauploadtype"), info)); - ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info)); - ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info)); - ds.setVersioning(field(rs.getBoolean("versioning"), info)); - ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info)); - ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info)); - ds.setPidsystems(field(rs.getString("pidsystems"), info)); - ds.setCertificates(field(rs.getString("certificates"), info)); - ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array - ds.setJournal( - prepareJournal( - rs.getString("officialname"), - rs.getString("journal"), - info)); // Journal - ds.setDataInfo(info); - ds.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(ds); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processProject(final ResultSet rs) { - try { - - final DataInfo info = prepareDataInfo(rs); - - final Project p = new Project(); - - p.setId(createOpenaireId(40, rs.getString("projectid"), true)); - p.setOriginalId(Arrays.asList(rs.getString("projectid"))); - p.setCollectedfrom( - listKeyValues( - createOpenaireId(10, rs.getString("collectedfromid"), true), - rs.getString("collectedfromname"))); - p.setPid(new ArrayList<>()); - p.setDateofcollection(asString(rs.getDate("dateofcollection"))); - p.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); - p.setExtraInfo(new ArrayList<>()); // Values not present in the DB - p.setOaiprovenance(null); // Values not present in the DB - p.setWebsiteurl(field(rs.getString("websiteurl"), info)); - p.setCode(field(rs.getString("code"), info)); - p.setAcronym(field(rs.getString("acronym"), info)); - p.setTitle(field(rs.getString("title"), info)); - p.setStartdate(field(asString(rs.getDate("startdate")), info)); - p.setEnddate(field(asString(rs.getDate("enddate")), info)); - p.setCallidentifier(field(rs.getString("callidentifier"), info)); - p.setKeywords(field(rs.getString("keywords"), info)); - p.setDuration(field(Integer.toString(rs.getInt("duration")), info)); - p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info)); - p.setOamandatepublications( - field(Boolean.toString(rs.getBoolean("oamandatepublications")), info)); - p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info)); - p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); - p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info)); - p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype"))); - p.setOptional1(field(rs.getString("optional1"), info)); - p.setOptional2(field(rs.getString("optional2"), info)); - p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info)); - p.setContactfullname(field(rs.getString("contactfullname"), info)); - p.setContactfax(field(rs.getString("contactfax"), info)); - p.setContactphone(field(rs.getString("contactphone"), info)); - p.setContactemail(field(rs.getString("contactemail"), info)); - p.setSummary(field(rs.getString("summary"), info)); - p.setCurrency(field(rs.getString("currency"), info)); - p.setTotalcost(new Float(rs.getDouble("totalcost"))); - p.setFundedamount(new Float(rs.getDouble("fundedamount"))); - p.setDataInfo(info); - p.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(p); - - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processOrganization(final ResultSet rs) { - - try { - - final DataInfo info = prepareDataInfo(rs); - - final Organization o = new Organization(); - - o.setId(createOpenaireId(20, rs.getString("organizationid"), true)); - o.setOriginalId(Arrays.asList(rs.getString("organizationid"))); - o.setCollectedfrom( - listKeyValues( - createOpenaireId(10, rs.getString("collectedfromid"), true), - rs.getString("collectedfromname"))); - o.setPid(new ArrayList<>()); - o.setDateofcollection(asString(rs.getDate("dateofcollection"))); - o.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); - o.setExtraInfo(new ArrayList<>()); // Values not present in the DB - o.setOaiprovenance(null); // Values not present in the DB - o.setLegalshortname(field(rs.getString("legalshortname"), info)); - o.setLegalname(field(rs.getString("legalname"), info)); - o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query - o.setWebsiteurl(field(rs.getString("websiteurl"), info)); - o.setLogourl(field(rs.getString("logourl"), info)); - o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info)); - o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info)); - o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info)); - o.setEcresearchorganization( - field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info)); - o.setEchighereducation( - field(Boolean.toString(rs.getBoolean("echighereducation")), info)); - o.setEcinternationalorganizationeurinterests( - field( - Boolean.toString( - rs.getBoolean("ecinternationalorganizationeurinterests")), - info)); - o.setEcinternationalorganization( - field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info)); - o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info)); - o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info)); - o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info)); - o.setCountry(prepareQualifierSplitting(rs.getString("country"))); - o.setDataInfo(info); - o.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(o); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processDatasourceOrganization(final ResultSet rs) { - try { - final DataInfo info = prepareDataInfo(rs); - final String orgId = createOpenaireId(20, rs.getString("organization"), true); - final String dsId = createOpenaireId(10, rs.getString("datasource"), true); - final List collectedFrom = - listKeyValues( - createOpenaireId(10, rs.getString("collectedfromid"), true), - rs.getString("collectedfromname")); - - final Relation r1 = new Relation(); - r1.setRelType("datasourceOrganization"); - r1.setSubRelType("provision"); - r1.setRelClass("isProvidedBy"); - r1.setSource(dsId); - r1.setTarget(orgId); - r1.setCollectedfrom(collectedFrom); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - final Relation r2 = new Relation(); - r2.setRelType("datasourceOrganization"); - r2.setSubRelType("provision"); - r2.setRelClass("provides"); - r2.setSource(orgId); - r2.setTarget(dsId); - r2.setCollectedfrom(collectedFrom); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processProjectOrganization(final ResultSet rs) { - try { - final DataInfo info = prepareDataInfo(rs); - final String orgId = createOpenaireId(20, rs.getString("resporganization"), true); - final String projectId = createOpenaireId(40, rs.getString("project"), true); - final List collectedFrom = - listKeyValues( - createOpenaireId(10, rs.getString("collectedfromid"), true), - rs.getString("collectedfromname")); - - final Relation r1 = new Relation(); - r1.setRelType("projectOrganization"); - r1.setSubRelType("participation"); - r1.setRelClass("isParticipant"); - r1.setSource(projectId); - r1.setTarget(orgId); - r1.setCollectedfrom(collectedFrom); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - final Relation r2 = new Relation(); - r2.setRelType("projectOrganization"); - r2.setSubRelType("participation"); - r2.setRelClass("hasParticipant"); - r2.setSource(orgId); - r2.setTarget(projectId); - r2.setCollectedfrom(collectedFrom); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processClaims(final ResultSet rs) { - - final DataInfo info = - dataInfo( - false, - null, - false, - false, - qualifier( - "user:claim", - "user:claim", - "dnet:provenanceActions", - "dnet:provenanceActions"), - "0.9"); - - final List collectedFrom = - listKeyValues(createOpenaireId(10, "infrastruct_::openaire", true), "OpenAIRE"); - - try { - - if (rs.getString("source_type").equals("context")) { - final Result r; - - if (rs.getString("target_type").equals("dataset")) { - r = new Dataset(); - } else if (rs.getString("target_type").equals("software")) { - r = new Software(); - } else if (rs.getString("target_type").equals("other")) { - r = new OtherResearchProduct(); - } else { - r = new Publication(); - } - r.setId(createOpenaireId(50, rs.getString("target_id"), false)); - r.setLastupdatetimestamp(lastUpdateTimestamp); - r.setContext(prepareContext(rs.getString("source_id"), info)); - r.setDataInfo(info); - r.setCollectedfrom(collectedFrom); - - return Arrays.asList(r); - } else { - final String sourceId = - createOpenaireId( - rs.getString("source_type"), rs.getString("source_id"), false); - final String targetId = - createOpenaireId( - rs.getString("target_type"), rs.getString("target_id"), false); - - final Relation r1 = new Relation(); - final Relation r2 = new Relation(); - - if (rs.getString("source_type").equals("project")) { - r1.setCollectedfrom(collectedFrom); - r1.setRelType("resultProject"); - r1.setSubRelType("outcome"); - r1.setRelClass("produces"); - - r2.setCollectedfrom(collectedFrom); - r2.setRelType("resultProject"); - r2.setSubRelType("outcome"); - r2.setRelClass("isProducedBy"); - } else { - r1.setCollectedfrom(collectedFrom); - r1.setRelType("resultResult"); - r1.setSubRelType("relationship"); - r1.setRelClass("isRelatedTo"); - - r2.setCollectedfrom(collectedFrom); - r2.setRelType("resultResult"); - r2.setSubRelType("relationship"); - r2.setRelClass("isRelatedTo"); - } - - r1.setSource(sourceId); - r1.setTarget(targetId); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - r2.setSource(targetId); - r2.setTarget(sourceId); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } - - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - private List prepareContext(final String id, final DataInfo dataInfo) { - final Context context = new Context(); - context.setId(id); - context.setDataInfo(Arrays.asList(dataInfo)); - return Arrays.asList(context); - } - - private DataInfo prepareDataInfo(final ResultSet rs) throws SQLException { - final Boolean deletedbyinference = rs.getBoolean("deletedbyinference"); - final String inferenceprovenance = rs.getString("inferenceprovenance"); - final Boolean inferred = rs.getBoolean("inferred"); - final String trust = rs.getString("trust"); - return dataInfo( - deletedbyinference, - inferenceprovenance, - inferred, - false, - ENTITYREGISTRY_PROVENANCE_ACTION, - trust); - } - - private Qualifier prepareQualifierSplitting(final String s) { - if (StringUtils.isBlank(s)) { - return null; - } - final String[] arr = s.split("@@@"); - return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null; - } - - private List> prepareListFields(final Array array, final DataInfo info) { - try { - return array != null - ? listFields(info, (String[]) array.getArray()) - : new ArrayList<>(); - } catch (final SQLException e) { - throw new RuntimeException("Invalid SQL array", e); - } - } - - private StructuredProperty prepareStructProp(final String s, final DataInfo dataInfo) { - if (StringUtils.isBlank(s)) { - return null; - } - final String[] parts = s.split("###"); - if (parts.length == 2) { - final String value = parts[0]; - final String[] arr = parts[1].split("@@@"); - if (arr.length == 4) { - return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); - } - } - return null; - } - - private List prepareListOfStructProps( - final Array array, final DataInfo dataInfo) throws SQLException { - final List res = new ArrayList<>(); - if (array != null) { - for (final String s : (String[]) array.getArray()) { - final StructuredProperty sp = prepareStructProp(s, dataInfo); - if (sp != null) { - res.add(sp); - } - } - } - - return res; - } - - private Journal prepareJournal(final String name, final String sj, final DataInfo info) { - if (StringUtils.isNotBlank(sj)) { - final String[] arr = sj.split("@@@"); - if (arr.length == 3) { - final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null; - final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null; - ; - final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null; - ; - if (issn != null || eissn != null || lissn != null) { - return journal( - name, issn, eissn, eissn, null, null, null, null, null, null, null, - info); - } - } - } - return null; - } - - @Override - public void close() throws IOException { - super.close(); - dbClient.close(); - } + implements Closeable { + + private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class); + + private final DbClient dbClient; + + private final long lastUpdateTimestamp; + + public static void main(final String[] args) throws Exception { + final ArgumentApplicationParser parser = + new ArgumentApplicationParser( + IOUtils.toString(MigrateDbEntitiesApplication.class + .getResourceAsStream("/eu/dnetlib/dhp/oa/graph/migrate_db_entities_parameters.json"))); + + parser.parseArgument(args); + + final String dbUrl = parser.get("postgresUrl"); + final String dbUser = parser.get("postgresUser"); + final String dbPassword = parser.get("postgresPassword"); + + final String hdfsPath = parser.get("hdfsPath"); + + final boolean processClaims = + parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims"); + + try (final MigrateDbEntitiesApplication smdbe = + new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser, dbPassword)) { + if (processClaims) { + log.info("Processing claims..."); + smdbe.execute("queryClaims.sql", smdbe::processClaims); + } else { + log.info("Processing datasources..."); + smdbe.execute("queryDatasources.sql", smdbe::processDatasource); + + log.info("Processing projects..."); + smdbe.execute("queryProjects.sql", smdbe::processProject); + + log.info("Processing orgs..."); + smdbe.execute("queryOrganizations.sql", smdbe::processOrganization); + + log.info("Processing relations ds <-> orgs ..."); + smdbe.execute("queryDatasourceOrganization.sql", smdbe::processDatasourceOrganization); + + log.info("Processing projects <-> orgs ..."); + smdbe.execute("queryProjectOrganization.sql", smdbe::processProjectOrganization); + } + log.info("All done."); + } + } + + protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST + super(); + this.dbClient = null; + this.lastUpdateTimestamp = new Date().getTime(); + } + + public MigrateDbEntitiesApplication( + final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword) + throws Exception { + super(hdfsPath); + this.dbClient = new DbClient(dbUrl, dbUser, dbPassword); + this.lastUpdateTimestamp = new Date().getTime(); + } + + public void execute(final String sqlFile, final Function> producer) + throws Exception { + final String sql = + IOUtils.toString(getClass().getResourceAsStream("/eu/dnetlib/dhp/oa/graph/sql/" + sqlFile)); + + final Consumer consumer = rs -> producer.apply(rs).forEach(oaf -> emitOaf(oaf)); + + dbClient.processResults(sql, consumer); + } + + public List processDatasource(final ResultSet rs) { + + try { + + final DataInfo info = prepareDataInfo(rs); + + final Datasource ds = new Datasource(); + + ds.setId(createOpenaireId(10, rs.getString("datasourceid"), true)); + ds.setOriginalId(Arrays.asList(rs.getString("datasourceid"))); + ds.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); + ds.setPid(new ArrayList<>()); + ds.setDateofcollection(asString(rs.getDate("dateofcollection"))); + ds.setDateoftransformation(null); // Value not returned by the SQL query + ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB + ds.setOaiprovenance(null); // Values not present in the DB + ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype"))); + ds.setOpenairecompatibility(prepareQualifierSplitting(rs.getString("openairecompatibility"))); + ds.setOfficialname(field(rs.getString("officialname"), info)); + ds.setEnglishname(field(rs.getString("englishname"), info)); + ds.setWebsiteurl(field(rs.getString("websiteurl"), info)); + ds.setLogourl(field(rs.getString("logourl"), info)); + ds.setContactemail(field(rs.getString("contactemail"), info)); + ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info)); + ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info)); + ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info)); + ds.setDateofvalidation(field(asString(rs.getDate("dateofvalidation")), info)); + ds.setDescription(field(rs.getString("description"), info)); + ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); + ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info)); + ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info)); + ds.setOdpolicies(field(rs.getString("odpolicies"), info)); + ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info)); + ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info)); + ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info)); + ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info)); + ds.setReleaseenddate(field(asString(rs.getDate("releaseenddate")), info)); + ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info)); + ds.setDataprovider(field(rs.getBoolean("dataprovider"), info)); + ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info)); + ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info)); + ds.setDatauploadtype(field(rs.getString("datauploadtype"), info)); + ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info)); + ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info)); + ds.setVersioning(field(rs.getBoolean("versioning"), info)); + ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info)); + ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info)); + ds.setPidsystems(field(rs.getString("pidsystems"), info)); + ds.setCertificates(field(rs.getString("certificates"), info)); + ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array + ds.setJournal(prepareJournal(rs.getString("officialname"), rs.getString("journal"), info)); // Journal + ds.setDataInfo(info); + ds.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(ds); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processProject(final ResultSet rs) { + try { + + final DataInfo info = prepareDataInfo(rs); + + final Project p = new Project(); + + p.setId(createOpenaireId(40, rs.getString("projectid"), true)); + p.setOriginalId(Arrays.asList(rs.getString("projectid"))); + p.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); + p.setPid(new ArrayList<>()); + p.setDateofcollection(asString(rs.getDate("dateofcollection"))); + p.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); + p.setExtraInfo(new ArrayList<>()); // Values not present in the DB + p.setOaiprovenance(null); // Values not present in the DB + p.setWebsiteurl(field(rs.getString("websiteurl"), info)); + p.setCode(field(rs.getString("code"), info)); + p.setAcronym(field(rs.getString("acronym"), info)); + p.setTitle(field(rs.getString("title"), info)); + p.setStartdate(field(asString(rs.getDate("startdate")), info)); + p.setEnddate(field(asString(rs.getDate("enddate")), info)); + p.setCallidentifier(field(rs.getString("callidentifier"), info)); + p.setKeywords(field(rs.getString("keywords"), info)); + p.setDuration(field(Integer.toString(rs.getInt("duration")), info)); + p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info)); + p.setOamandatepublications(field(Boolean.toString(rs.getBoolean("oamandatepublications")), info)); + p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info)); + p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); + p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info)); + p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype"))); + p.setOptional1(field(rs.getString("optional1"), info)); + p.setOptional2(field(rs.getString("optional2"), info)); + p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info)); + p.setContactfullname(field(rs.getString("contactfullname"), info)); + p.setContactfax(field(rs.getString("contactfax"), info)); + p.setContactphone(field(rs.getString("contactphone"), info)); + p.setContactemail(field(rs.getString("contactemail"), info)); + p.setSummary(field(rs.getString("summary"), info)); + p.setCurrency(field(rs.getString("currency"), info)); + p.setTotalcost(new Float(rs.getDouble("totalcost"))); + p.setFundedamount(new Float(rs.getDouble("fundedamount"))); + p.setDataInfo(info); + p.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(p); + + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processOrganization(final ResultSet rs) { + + try { + + final DataInfo info = prepareDataInfo(rs); + + final Organization o = new Organization(); + + o.setId(createOpenaireId(20, rs.getString("organizationid"), true)); + o.setOriginalId(Arrays.asList(rs.getString("organizationid"))); + o.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); + o.setPid(new ArrayList<>()); + o.setDateofcollection(asString(rs.getDate("dateofcollection"))); + o.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); + o.setExtraInfo(new ArrayList<>()); // Values not present in the DB + o.setOaiprovenance(null); // Values not present in the DB + o.setLegalshortname(field(rs.getString("legalshortname"), info)); + o.setLegalname(field(rs.getString("legalname"), info)); + o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query + o.setWebsiteurl(field(rs.getString("websiteurl"), info)); + o.setLogourl(field(rs.getString("logourl"), info)); + o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info)); + o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info)); + o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info)); + o.setEcresearchorganization(field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info)); + o.setEchighereducation(field(Boolean.toString(rs.getBoolean("echighereducation")), info)); + o.setEcinternationalorganizationeurinterests(field(Boolean.toString(rs.getBoolean("ecinternationalorganizationeurinterests")), info)); + o.setEcinternationalorganization(field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info)); + o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info)); + o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info)); + o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info)); + o.setCountry(prepareQualifierSplitting(rs.getString("country"))); + o.setDataInfo(info); + o.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(o); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processDatasourceOrganization(final ResultSet rs) { + try { + final DataInfo info = prepareDataInfo(rs); + final String orgId = createOpenaireId(20, rs.getString("organization"), true); + final String dsId = createOpenaireId(10, rs.getString("datasource"), true); + final List collectedFrom = + listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname")); + + final Relation r1 = new Relation(); + r1.setRelType("datasourceOrganization"); + r1.setSubRelType("provision"); + r1.setRelClass("isProvidedBy"); + r1.setSource(dsId); + r1.setTarget(orgId); + r1.setCollectedfrom(collectedFrom); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + final Relation r2 = new Relation(); + r2.setRelType("datasourceOrganization"); + r2.setSubRelType("provision"); + r2.setRelClass("provides"); + r2.setSource(orgId); + r2.setTarget(dsId); + r2.setCollectedfrom(collectedFrom); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processProjectOrganization(final ResultSet rs) { + try { + final DataInfo info = prepareDataInfo(rs); + final String orgId = createOpenaireId(20, rs.getString("resporganization"), true); + final String projectId = createOpenaireId(40, rs.getString("project"), true); + final List collectedFrom = + listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname")); + + final Relation r1 = new Relation(); + r1.setRelType("projectOrganization"); + r1.setSubRelType("participation"); + r1.setRelClass("isParticipant"); + r1.setSource(projectId); + r1.setTarget(orgId); + r1.setCollectedfrom(collectedFrom); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + final Relation r2 = new Relation(); + r2.setRelType("projectOrganization"); + r2.setSubRelType("participation"); + r2.setRelClass("hasParticipant"); + r2.setSource(orgId); + r2.setTarget(projectId); + r2.setCollectedfrom(collectedFrom); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processClaims(final ResultSet rs) { + + final DataInfo info = + dataInfo(false, null, false, false, qualifier("user:claim", "user:claim", "dnet:provenanceActions", "dnet:provenanceActions"), "0.9"); + + final List collectedFrom = + listKeyValues(createOpenaireId(10, "infrastruct_::openaire", true), "OpenAIRE"); + + try { + + if (rs.getString("source_type").equals("context")) { + final Result r; + + if (rs.getString("target_type").equals("dataset")) { + r = new Dataset(); + r.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); + } else if (rs.getString("target_type").equals("software")) { + r = new Software(); + r.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); + } else if (rs.getString("target_type").equals("other")) { + r = new OtherResearchProduct(); + r.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); + } else { + r = new Publication(); + r.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); + } + r.setId(createOpenaireId(50, rs.getString("target_id"), false)); + r.setLastupdatetimestamp(lastUpdateTimestamp); + r.setContext(prepareContext(rs.getString("source_id"), info)); + r.setDataInfo(info); + r.setCollectedfrom(collectedFrom); + + return Arrays.asList(r); + } else { + final String sourceId = + createOpenaireId(rs.getString("source_type"), rs.getString("source_id"), false); + final String targetId = + createOpenaireId(rs.getString("target_type"), rs.getString("target_id"), false); + + final Relation r1 = new Relation(); + final Relation r2 = new Relation(); + + if (rs.getString("source_type").equals("project")) { + r1.setCollectedfrom(collectedFrom); + r1.setRelType("resultProject"); + r1.setSubRelType("outcome"); + r1.setRelClass("produces"); + + r2.setCollectedfrom(collectedFrom); + r2.setRelType("resultProject"); + r2.setSubRelType("outcome"); + r2.setRelClass("isProducedBy"); + } else { + r1.setCollectedfrom(collectedFrom); + r1.setRelType("resultResult"); + r1.setSubRelType("relationship"); + r1.setRelClass("isRelatedTo"); + + r2.setCollectedfrom(collectedFrom); + r2.setRelType("resultResult"); + r2.setSubRelType("relationship"); + r2.setRelClass("isRelatedTo"); + } + + r1.setSource(sourceId); + r1.setTarget(targetId); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + r2.setSource(targetId); + r2.setTarget(sourceId); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } + + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + private List prepareContext(final String id, final DataInfo dataInfo) { + final Context context = new Context(); + context.setId(id); + context.setDataInfo(Arrays.asList(dataInfo)); + return Arrays.asList(context); + } + + private DataInfo prepareDataInfo(final ResultSet rs) throws SQLException { + final Boolean deletedbyinference = rs.getBoolean("deletedbyinference"); + final String inferenceprovenance = rs.getString("inferenceprovenance"); + final Boolean inferred = rs.getBoolean("inferred"); + final String trust = rs.getString("trust"); + return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, MigrationConstants.ENTITYREGISTRY_PROVENANCE_ACTION, trust); + } + + private Qualifier prepareQualifierSplitting(final String s) { + if (StringUtils.isBlank(s)) { return null; } + final String[] arr = s.split("@@@"); + return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null; + } + + private List> prepareListFields(final Array array, final DataInfo info) { + try { + return array != null + ? listFields(info, (String[]) array.getArray()) + : new ArrayList<>(); + } catch (final SQLException e) { + throw new RuntimeException("Invalid SQL array", e); + } + } + + private StructuredProperty prepareStructProp(final String s, final DataInfo dataInfo) { + if (StringUtils.isBlank(s)) { return null; } + final String[] parts = s.split("###"); + if (parts.length == 2) { + final String value = parts[0]; + final String[] arr = parts[1].split("@@@"); + if (arr.length == 4) { return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); } + } + return null; + } + + private List prepareListOfStructProps( + final Array array, + final DataInfo dataInfo) throws SQLException { + final List res = new ArrayList<>(); + if (array != null) { + for (final String s : (String[]) array.getArray()) { + final StructuredProperty sp = prepareStructProp(s, dataInfo); + if (sp != null) { + res.add(sp); + } + } + } + + return res; + } + + private Journal prepareJournal(final String name, final String sj, final DataInfo info) { + if (StringUtils.isNotBlank(sj)) { + final String[] arr = sj.split("@@@"); + if (arr.length == 3) { + final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null; + final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null;; + final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null;; + if (issn != null || eissn != null || lissn != null) { + return journal(name, issn, eissn, eissn, null, null, null, null, null, null, null, info); + } + } + } + return null; + } + + @Override + public void close() throws IOException { + super.close(); + dbClient.close(); + } } diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java new file mode 100644 index 000000000..f9ff105b0 --- /dev/null +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java @@ -0,0 +1,22 @@ +package eu.dnetlib.dhp.oa.graph.raw.common; + +import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; + +import eu.dnetlib.dhp.schema.oaf.Qualifier; + +public class MigrationConstants { + + public static final Qualifier PUBLICATION_RESULTTYPE_QUALIFIER = + qualifier("publication", "publication", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier DATASET_RESULTTYPE_QUALIFIER = + qualifier("dataset", "dataset", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier SOFTWARE_RESULTTYPE_QUALIFIER = + qualifier("software", "software", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier OTHER_RESULTTYPE_QUALIFIER = + qualifier("other", "other", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier REPOSITORY_PROVENANCE_ACTIONS = + qualifier("sysimport:crosswalk:repository", "sysimport:crosswalk:repository", "dnet:provenanceActions", "dnet:provenanceActions"); + public static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = + qualifier("sysimport:crosswalk:entityregistry", "sysimport:crosswalk:entityregistry", "dnet:provenanceActions", "dnet:provenanceActions"); + +} From ba4339f1427f22b8815ae579f453c0a392cb8f99 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Wed, 22 Apr 2020 14:23:09 +0200 Subject: [PATCH 03/17] excluded org.apache.hadoop:hadoop-common from the dnet-actionmanager-common dependency to avoid multiple transitive jaxb-impl versions to conflict when instantiating the ISLookup client stub --- pom.xml | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/pom.xml b/pom.xml index f4dfc2c0d..25e84a424 100644 --- a/pom.xml +++ b/pom.xml @@ -292,6 +292,12 @@ eu.dnetlib dnet-actionmanager-common 6.0.5 + + + org.apache.hadoop + hadoop-common + + eu.dnetlib From ade4cb97afe1db98039c4b8869c5cec41727454f Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Wed, 22 Apr 2020 18:24:06 +0200 Subject: [PATCH 04/17] fixed parameters passed to the postprocessing action in the workflow mapping the graph as hive DB --- .../dhp/oa/graph/hive/oozie_app/config-default.xml | 2 +- .../hive/oozie_app/lib/scripts/postprocessing.sql | 8 ++++---- .../dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml | 12 ++++++++++-- 3 files changed, 15 insertions(+), 7 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml index 2c9a92d7a..9608732ed 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/config-default.xml @@ -16,7 +16,7 @@ thrift://iis-cdh5-test-m3.ocean.icm.edu.pl:9083 - hive_jdbc_url + hiveJdbcUrl jdbc:hive2://iis-cdh5-test-m3.ocean.icm.edu.pl:10000 diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql index c92f8d1af..9a8a70770 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql @@ -1,10 +1,10 @@ DROP VIEW IF EXISTS ${hive_db_name}.result; CREATE VIEW IF NOT EXISTS result as - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hive_db_name}.publication p + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.publication p union all - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hive_db_name}.dataset d + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.dataset d union all - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hive_db_name}.software s + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.software s union all - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hive_db_name}.otherresearchproduct o; + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.otherresearchproduct o; diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml index 4e9e95c83..dc1fa092d 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml @@ -9,6 +9,14 @@ hiveDbName the target hive database name + + hiveJdbcUrl + hive server jdbc url + + + hiveMetastoreUris + hive server metastore URIs + sparkDriverMemory memory for driver process @@ -105,9 +113,9 @@ ${hiveMetastoreUris} - ${hive_jdbc_url}/${hive_db_name} + ${hiveJdbcUrl}/${hiveDbName} - hive_db_name=${hive_db_name} + hiveDbName=${hiveDbName} From 9ddafd46cafddc172f73d7cda623fe3f954befc3 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Thu, 23 Apr 2020 07:50:18 +0200 Subject: [PATCH 05/17] fixed dedup record id prefix, set the correct dataInfo in the DedupRecordFactory --- .../dhp/oa/dedup/DedupRecordFactory.java | 53 +++++++++---------- .../dhp/oa/dedup/SparkCreateDedupRecord.java | 29 ++++++++-- .../oa/dedup/graph/ConnectedComponent.java | 2 +- .../dedup/graph/ConnectedComponent.java | 2 +- 4 files changed, 54 insertions(+), 32 deletions(-) diff --git a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/DedupRecordFactory.java b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/DedupRecordFactory.java index e5c8a4606..47aab1d20 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/DedupRecordFactory.java +++ b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/DedupRecordFactory.java @@ -25,6 +25,7 @@ public class DedupRecordFactory { public static Dataset createDedupRecord( final SparkSession spark, + final DataInfo dataInfo, final String mergeRelsInputPath, final String entitiesInputPath, final Class clazz) { @@ -67,41 +68,39 @@ public class DedupRecordFactory { Encoders.STRING()) .mapGroups( (MapGroupsFunction, T>) - (key, values) -> entityMerger(key, values, ts, clazz), + (key, values) -> entityMerger(key, values, ts, dataInfo), Encoders.bean(clazz)); } private static T entityMerger( - String id, Iterator> entities, long ts, Class clazz) { - try { - T entity = clazz.newInstance(); - entity.setId(id); - entity.setDataInfo(new DataInfo()); - entity.getDataInfo().setTrust("0.9"); - entity.setLastupdatetimestamp(ts); + String id, Iterator> entities, long ts, DataInfo dataInfo) { - final Collection dates = Lists.newArrayList(); - entities.forEachRemaining( - t -> { - T duplicate = t._2(); - entity.mergeFrom(duplicate); - if (ModelSupport.isSubClass(duplicate, Result.class)) { - Result r1 = (Result) duplicate; - Result er = (Result) entity; - er.setAuthor(DedupUtility.mergeAuthor(er.getAuthor(), r1.getAuthor())); + T entity = entities.next()._2(); - if (er.getDateofacceptance() != null) { - dates.add(r1.getDateofacceptance().getValue()); - } + final Collection dates = Lists.newArrayList(); + entities.forEachRemaining( + t -> { + T duplicate = t._2(); + entity.mergeFrom(duplicate); + if (ModelSupport.isSubClass(duplicate, Result.class)) { + Result r1 = (Result) duplicate; + Result er = (Result) entity; + er.setAuthor(DedupUtility.mergeAuthor(er.getAuthor(), r1.getAuthor())); + + if (r1.getDateofacceptance() != null) { + dates.add(r1.getDateofacceptance().getValue()); } - }); + } + }); - if (ModelSupport.isSubClass(entity, Result.class)) { - ((Result) entity).setDateofacceptance(DatePicker.pick(dates)); - } - return entity; - } catch (IllegalAccessException | InstantiationException e) { - throw new RuntimeException(e); + if (ModelSupport.isSubClass(entity, Result.class)) { + ((Result) entity).setDateofacceptance(DatePicker.pick(dates)); } + + entity.setId(id); + entity.setLastupdatetimestamp(ts); + entity.setDataInfo(dataInfo); + + return entity; } } diff --git a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkCreateDedupRecord.java b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkCreateDedupRecord.java index c46464ffd..42a0cff8a 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkCreateDedupRecord.java +++ b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/SparkCreateDedupRecord.java @@ -3,7 +3,9 @@ package eu.dnetlib.dhp.oa.dedup; import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.schema.common.EntityType; import eu.dnetlib.dhp.schema.common.ModelSupport; +import eu.dnetlib.dhp.schema.oaf.DataInfo; import eu.dnetlib.dhp.schema.oaf.OafEntity; +import eu.dnetlib.dhp.schema.oaf.Qualifier; import eu.dnetlib.dhp.utils.ISLookupClientFactory; import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException; import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService; @@ -21,6 +23,10 @@ public class SparkCreateDedupRecord extends AbstractSparkAction { private static final Logger log = LoggerFactory.getLogger(SparkCreateDedupRecord.class); + public static final String ROOT_TRUST = "0.8"; + public static final String PROVENANCE_ACTION_CLASS = "sysimport:dedup"; + public static final String PROVENANCE_ACTIONS = "dnet:provenanceActions"; + public SparkCreateDedupRecord(ArgumentApplicationParser parser, SparkSession spark) { super(parser, spark); } @@ -67,13 +73,30 @@ public class SparkCreateDedupRecord extends AbstractSparkAction { DedupUtility.createMergeRelPath(workingPath, actionSetId, subEntity); final String entityPath = DedupUtility.createEntityPath(graphBasePath, subEntity); - Class clazz = ModelSupport.entityTypes.get(EntityType.valueOf(subEntity)); - - DedupRecordFactory.createDedupRecord(spark, mergeRelPath, entityPath, clazz) + final Class clazz = + ModelSupport.entityTypes.get(EntityType.valueOf(subEntity)); + final DataInfo dataInfo = getDataInfo(dedupConf); + DedupRecordFactory.createDedupRecord(spark, dataInfo, mergeRelPath, entityPath, clazz) .write() .mode(SaveMode.Overwrite) .option("compression", "gzip") .json(outputPath); } } + + private static DataInfo getDataInfo(DedupConfig dedupConf) { + DataInfo info = new DataInfo(); + info.setDeletedbyinference(false); + info.setInferred(true); + info.setInvisible(false); + info.setTrust(ROOT_TRUST); + info.setInferenceprovenance(dedupConf.getWf().getConfigurationId()); + Qualifier provenance = new Qualifier(); + provenance.setClassid(PROVENANCE_ACTION_CLASS); + provenance.setClassname(PROVENANCE_ACTION_CLASS); + provenance.setSchemeid(PROVENANCE_ACTIONS); + provenance.setSchemename(PROVENANCE_ACTIONS); + info.setProvenanceaction(provenance); + return info; + } } diff --git a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/graph/ConnectedComponent.java b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/graph/ConnectedComponent.java index 4baac0229..b89a0e7e2 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/graph/ConnectedComponent.java +++ b/dhp-workflows/dhp-dedup-openaire/src/main/java/eu/dnetlib/dhp/oa/dedup/graph/ConnectedComponent.java @@ -25,7 +25,7 @@ public class ConnectedComponent implements Serializable { if (docIds.size() > 1) { final String s = getMin(); String prefix = s.split("\\|")[0]; - ccId = prefix + "|dedup_______::" + DedupUtility.md5(s); + ccId = prefix + "|dedup_wf_001::" + DedupUtility.md5(s); return ccId; } else { return docIds.iterator().next(); diff --git a/dhp-workflows/dhp-dedup-scholexplorer/src/main/java/eu/dnetlib/dedup/graph/ConnectedComponent.java b/dhp-workflows/dhp-dedup-scholexplorer/src/main/java/eu/dnetlib/dedup/graph/ConnectedComponent.java index 41d53944f..a5aa94e09 100644 --- a/dhp-workflows/dhp-dedup-scholexplorer/src/main/java/eu/dnetlib/dedup/graph/ConnectedComponent.java +++ b/dhp-workflows/dhp-dedup-scholexplorer/src/main/java/eu/dnetlib/dedup/graph/ConnectedComponent.java @@ -25,7 +25,7 @@ public class ConnectedComponent implements Serializable { if (docIds.size() > 1) { final String s = getMin(); String prefix = s.split("\\|")[0]; - ccId = prefix + "|dedup_______::" + DedupUtility.md5(s); + ccId = prefix + "|dedup_wf_001::" + DedupUtility.md5(s); return ccId; } else { return docIds.iterator().next(); From 1e7583c5a6c68e50a93362fad40c0633a393330a Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Thu, 23 Apr 2020 07:51:34 +0200 Subject: [PATCH 06/17] filtered invisible records in data provision workflow --- .../dhp/oa/provision/CreateRelatedEntitiesJob_phase2.java | 1 + 1 file changed, 1 insertion(+) diff --git a/dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/oa/provision/CreateRelatedEntitiesJob_phase2.java b/dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/oa/provision/CreateRelatedEntitiesJob_phase2.java index 20786582f..eaa18ad0b 100644 --- a/dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/oa/provision/CreateRelatedEntitiesJob_phase2.java +++ b/dhp-workflows/dhp-graph-provision/src/main/java/eu/dnetlib/dhp/oa/provision/CreateRelatedEntitiesJob_phase2.java @@ -216,6 +216,7 @@ public class CreateRelatedEntitiesJob_phase2 { (MapFunction) value -> OBJECT_MAPPER.readValue(value, entityClazz), Encoders.bean(entityClazz)) + .filter("dataInfo.invisible == false") .map( (MapFunction) value -> From 91f81107b13c2bc4cf566f46ca27f0c59490556b Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Thu, 23 Apr 2020 07:52:32 +0200 Subject: [PATCH 07/17] applying code formatting --- .../raw/AbstractMdRecordToOafMapper.java | 826 ++++++++------- .../raw/MigrateDbEntitiesApplication.java | 996 +++++++++--------- .../graph/raw/common/MigrationConstants.java | 37 +- 3 files changed, 981 insertions(+), 878 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java index 5374a69e8..3519cd88d 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java @@ -10,19 +10,6 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.oaiIProvenance; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.HashMap; -import java.util.List; -import java.util.Map; - -import org.apache.commons.lang3.StringUtils; -import org.dom4j.Document; -import org.dom4j.DocumentFactory; -import org.dom4j.DocumentHelper; -import org.dom4j.Node; - import eu.dnetlib.dhp.oa.graph.raw.common.MigrationConstants; import eu.dnetlib.dhp.schema.oaf.Author; import eu.dnetlib.dhp.schema.oaf.DataInfo; @@ -41,388 +28,439 @@ import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Result; import eu.dnetlib.dhp.schema.oaf.Software; import eu.dnetlib.dhp.schema.oaf.StructuredProperty; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Date; +import java.util.HashMap; +import java.util.List; +import java.util.Map; +import org.apache.commons.lang3.StringUtils; +import org.dom4j.Document; +import org.dom4j.DocumentFactory; +import org.dom4j.DocumentHelper; +import org.dom4j.Node; public abstract class AbstractMdRecordToOafMapper { - protected final Map code2name; - - protected static final Qualifier MAIN_TITLE_QUALIFIER = - qualifier("main title", "main title", "dnet:dataCite_title", "dnet:dataCite_title"); - - protected AbstractMdRecordToOafMapper(final Map code2name) { - this.code2name = code2name; - } - - public List processMdRecord(final String xml) { - try { - final Map nsContext = new HashMap<>(); - nsContext.put("dr", "http://www.driver-repository.eu/namespace/dr"); - nsContext.put("dri", "http://www.driver-repository.eu/namespace/dri"); - nsContext.put("oaf", "http://namespace.openaire.eu/oaf"); - nsContext.put("oai", "http://www.openarchives.org/OAI/2.0/"); - nsContext.put("prov", "http://www.openarchives.org/OAI/2.0/provenance"); - nsContext.put("dc", "http://purl.org/dc/elements/1.1/"); - nsContext.put("datacite", "http://datacite.org/schema/kernel-3"); - DocumentFactory.getInstance().setXPathNamespaceURIs(nsContext); - - final Document doc = - DocumentHelper.parseText(xml.replaceAll("http://datacite.org/schema/kernel-4", "http://datacite.org/schema/kernel-3")); - - final String type = doc.valueOf("//dr:CobjCategory/@type"); - final KeyValue collectedFrom = - keyValue(createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), doc.valueOf("//oaf:collectedFrom/@name")); - final KeyValue hostedBy = - StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id")) - ? collectedFrom - : keyValue(createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), doc.valueOf("//oaf:hostedBy/@name")); - - final DataInfo info = prepareDataInfo(doc); - final long lastUpdateTimestamp = new Date().getTime(); - - return createOafs(doc, type, collectedFrom, hostedBy, info, lastUpdateTimestamp); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - protected List createOafs( - final Document doc, - final String type, - final KeyValue collectedFrom, - final KeyValue hostedBy, - final DataInfo info, - final long lastUpdateTimestamp) { - - final List oafs = new ArrayList<>(); - - switch (type.toLowerCase()) { - case "": - case "publication": - final Publication p = new Publication(); - populateResultFields(p, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - p.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); - p.setJournal(prepareJournal(doc, info)); - oafs.add(p); - break; - case "dataset": - final Dataset d = new Dataset(); - populateResultFields(d, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - d.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); - d.setStoragedate(prepareDatasetStorageDate(doc, info)); - d.setDevice(prepareDatasetDevice(doc, info)); - d.setSize(prepareDatasetSize(doc, info)); - d.setVersion(prepareDatasetVersion(doc, info)); - d.setLastmetadataupdate(prepareDatasetLastMetadataUpdate(doc, info)); - d.setMetadataversionnumber(prepareDatasetMetadataVersionNumber(doc, info)); - d.setGeolocation(prepareDatasetGeoLocations(doc, info)); - oafs.add(d); - break; - case "software": - final Software s = new Software(); - populateResultFields(s, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - s.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); - s.setDocumentationUrl(prepareSoftwareDocumentationUrls(doc, info)); - s.setLicense(prepareSoftwareLicenses(doc, info)); - s.setCodeRepositoryUrl(prepareSoftwareCodeRepositoryUrl(doc, info)); - s.setProgrammingLanguage(prepareSoftwareProgrammingLanguage(doc, info)); - oafs.add(s); - break; - case "otherresearchproducts": - default: - final OtherResearchProduct o = new OtherResearchProduct(); - populateResultFields(o, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - o.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); - o.setContactperson(prepareOtherResearchProductContactPersons(doc, info)); - o.setContactgroup(prepareOtherResearchProductContactGroups(doc, info)); - o.setTool(prepareOtherResearchProductTools(doc, info)); - oafs.add(o); - break; - } - - if (!oafs.isEmpty()) { - oafs.addAll(addProjectRels(doc, collectedFrom, info, lastUpdateTimestamp)); - oafs.addAll(addOtherResultRels(doc, collectedFrom, info, lastUpdateTimestamp)); - } - - return oafs; - } - - private List addProjectRels( - final Document doc, - final KeyValue collectedFrom, - final DataInfo info, - final long lastUpdateTimestamp) { - - final List res = new ArrayList<>(); - - final String docId = createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false); - - for (final Object o : doc.selectNodes("//oaf:projectid")) { - final String projectId = createOpenaireId(40, ((Node) o).getText(), true); - - final Relation r1 = new Relation(); - r1.setRelType("resultProject"); - r1.setSubRelType("outcome"); - r1.setRelClass("isProducedBy"); - r1.setSource(docId); - r1.setTarget(projectId); - r1.setCollectedfrom(Arrays.asList(collectedFrom)); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - res.add(r1); - - final Relation r2 = new Relation(); - r2.setRelType("resultProject"); - r2.setSubRelType("outcome"); - r2.setRelClass("produces"); - r2.setSource(projectId); - r2.setTarget(docId); - r2.setCollectedfrom(Arrays.asList(collectedFrom)); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - res.add(r2); - } - - return res; - } - - protected abstract List addOtherResultRels( - final Document doc, - final KeyValue collectedFrom, - final DataInfo info, - final long lastUpdateTimestamp); - - private void populateResultFields( - final Result r, - final Document doc, - final KeyValue collectedFrom, - final KeyValue hostedBy, - final DataInfo info, - final long lastUpdateTimestamp) { - r.setDataInfo(info); - r.setLastupdatetimestamp(lastUpdateTimestamp); - r.setId(createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false)); - r.setOriginalId(Arrays.asList(doc.valueOf("//dri:objIdentifier"))); - r.setCollectedfrom(Arrays.asList(collectedFrom)); - r.setPid(prepareListStructProps(doc, "//oaf:identifier", "@identifierType", "dnet:pid_types", "dnet:pid_types", info)); - r.setDateofcollection(doc.valueOf("//dr:dateOfCollection")); - r.setDateoftransformation(doc.valueOf("//dr:dateOfTransformation")); - r.setExtraInfo(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setOaiprovenance(prepareOAIprovenance(doc)); - r.setAuthor(prepareAuthors(doc, info)); - r.setLanguage(prepareLanguages(doc)); - r.setCountry(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setSubject(prepareSubjects(doc, info)); - r.setTitle(prepareTitles(doc, info)); - r.setRelevantdate(prepareRelevantDates(doc, info)); - r.setDescription(prepareDescriptions(doc, info)); - r.setDateofacceptance(prepareField(doc, "//oaf:dateAccepted", info)); - r.setPublisher(preparePublisher(doc, info)); - r.setEmbargoenddate(prepareField(doc, "//oaf:embargoenddate", info)); - r.setSource(prepareSources(doc, info)); - r.setFulltext(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setFormat(prepareFormats(doc, info)); - r.setContributor(prepareContributors(doc, info)); - r.setResourcetype(prepareResourceType(doc, info)); - r.setCoverage(prepareCoverages(doc, info)); - r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); - } - - protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); - - protected abstract List prepareInstances( - Document doc, - DataInfo info, - KeyValue collectedfrom, - KeyValue hostedby); - - protected abstract List> prepareSources(Document doc, DataInfo info); - - protected abstract List prepareRelevantDates(Document doc, DataInfo info); - - protected abstract List> prepareCoverages(Document doc, DataInfo info); - - protected abstract List> prepareContributors(Document doc, DataInfo info); - - protected abstract List> prepareFormats(Document doc, DataInfo info); - - protected abstract Field preparePublisher(Document doc, DataInfo info); - - protected abstract List> prepareDescriptions(Document doc, DataInfo info); - - protected abstract List prepareTitles(Document doc, DataInfo info); - - protected abstract List prepareSubjects(Document doc, DataInfo info); - - protected abstract Qualifier prepareLanguages(Document doc); - - protected abstract List prepareAuthors(Document doc, DataInfo info); - - protected abstract List> prepareOtherResearchProductTools( - Document doc, - DataInfo info); - - protected abstract List> prepareOtherResearchProductContactGroups( - Document doc, - DataInfo info); - - protected abstract List> prepareOtherResearchProductContactPersons( - Document doc, - DataInfo info); - - protected abstract Qualifier prepareSoftwareProgrammingLanguage(Document doc, DataInfo info); - - protected abstract Field prepareSoftwareCodeRepositoryUrl(Document doc, DataInfo info); - - protected abstract List prepareSoftwareLicenses( - Document doc, - DataInfo info); - - protected abstract List> prepareSoftwareDocumentationUrls( - Document doc, - DataInfo info); - - protected abstract List prepareDatasetGeoLocations(Document doc, DataInfo info); - - protected abstract Field prepareDatasetMetadataVersionNumber( - Document doc, - DataInfo info); - - protected abstract Field prepareDatasetLastMetadataUpdate(Document doc, DataInfo info); - - protected abstract Field prepareDatasetVersion(Document doc, DataInfo info); - - protected abstract Field prepareDatasetSize(Document doc, DataInfo info); - - protected abstract Field prepareDatasetDevice(Document doc, DataInfo info); - - protected abstract Field prepareDatasetStorageDate(Document doc, DataInfo info); - - private Journal prepareJournal(final Document doc, final DataInfo info) { - final Node n = doc.selectSingleNode("//oaf:journal"); - if (n != null) { - final String name = n.getText(); - final String issnPrinted = n.valueOf("@issn"); - final String issnOnline = n.valueOf("@eissn"); - final String issnLinking = n.valueOf("@lissn"); - final String ep = n.valueOf("@ep"); - final String iss = n.valueOf("@iss"); - final String sp = n.valueOf("@sp"); - final String vol = n.valueOf("@vol"); - final String edition = n.valueOf("@edition"); - if (StringUtils.isNotBlank(name)) { return journal(name, issnPrinted, issnOnline, issnLinking, ep, iss, sp, vol, edition, null, null, info); } - } - return null; - } - - protected Qualifier prepareQualifier( - final Node node, - final String xpath, - final String schemeId, - final String schemeName) { - final String classId = node.valueOf(xpath); - final String className = code2name.get(classId); - return qualifier(classId, className, schemeId, schemeName); - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final String xpathClassId, - final String schemeId, - final String schemeName, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - final String classId = n.valueOf(xpathClassId); - final String className = code2name.get(classId); - res.add(structuredProperty(n.getText(), classId, className, schemeId, schemeName, info)); - } - return res; - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final Qualifier qualifier, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - res.add(structuredProperty(n.getText(), qualifier, info)); - } - return res; - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - res.add(structuredProperty(n.getText(), n.valueOf("@classid"), n.valueOf("@classname"), n.valueOf("@schemeid"), n.valueOf("@schemename"), info)); - } - return res; - } - - protected OAIProvenance prepareOAIprovenance(final Document doc) { - final Node n = - doc.selectSingleNode("//*[local-name()='provenance']/*[local-name()='originDescription']"); - - if (n == null) { return null; } - - final String identifier = n.valueOf("./*[local-name()='identifier']"); - final String baseURL = n.valueOf("./*[local-name()='baseURL']");; - final String metadataNamespace = n.valueOf("./*[local-name()='metadataNamespace']");; - final boolean altered = n.valueOf("@altered").equalsIgnoreCase("true"); - final String datestamp = n.valueOf("./*[local-name()='datestamp']");; - final String harvestDate = n.valueOf("@harvestDate");; - - return oaiIProvenance(identifier, baseURL, metadataNamespace, altered, datestamp, harvestDate); - } - - protected DataInfo prepareDataInfo(final Document doc) { - final Node n = doc.selectSingleNode("//oaf:datainfo"); - - if (n == null) { return dataInfo(false, null, false, false, MigrationConstants.REPOSITORY_PROVENANCE_ACTIONS, "0.9"); } - - final String paClassId = n.valueOf("./oaf:provenanceaction/@classid"); - final String paClassName = n.valueOf("./oaf:provenanceaction/@classname"); - final String paSchemeId = n.valueOf("./oaf:provenanceaction/@schemeid"); - final String paSchemeName = n.valueOf("./oaf:provenanceaction/@schemename"); - - final boolean deletedbyinference = - Boolean.parseBoolean(n.valueOf("./oaf:deletedbyinference")); - final String inferenceprovenance = n.valueOf("./oaf:inferenceprovenance"); - final Boolean inferred = Boolean.parseBoolean(n.valueOf("./oaf:inferred")); - final String trust = n.valueOf("./oaf:trust"); - - return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, qualifier(paClassId, paClassName, paSchemeId, paSchemeName), trust); - } - - protected Field prepareField(final Node node, final String xpath, final DataInfo info) { - return field(node.valueOf(xpath), info); - } - - protected List> prepareListFields( - final Node node, - final String xpath, - final DataInfo info) { - return listFields(info, prepareListString(node, xpath)); - } - - protected List prepareListString(final Node node, final String xpath) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final String s = ((Node) o).getText().trim(); - if (StringUtils.isNotBlank(s)) { - res.add(s); - } - } - return res; - } + protected final Map code2name; + + protected static final Qualifier MAIN_TITLE_QUALIFIER = + qualifier("main title", "main title", "dnet:dataCite_title", "dnet:dataCite_title"); + + protected AbstractMdRecordToOafMapper(final Map code2name) { + this.code2name = code2name; + } + + public List processMdRecord(final String xml) { + try { + final Map nsContext = new HashMap<>(); + nsContext.put("dr", "http://www.driver-repository.eu/namespace/dr"); + nsContext.put("dri", "http://www.driver-repository.eu/namespace/dri"); + nsContext.put("oaf", "http://namespace.openaire.eu/oaf"); + nsContext.put("oai", "http://www.openarchives.org/OAI/2.0/"); + nsContext.put("prov", "http://www.openarchives.org/OAI/2.0/provenance"); + nsContext.put("dc", "http://purl.org/dc/elements/1.1/"); + nsContext.put("datacite", "http://datacite.org/schema/kernel-3"); + DocumentFactory.getInstance().setXPathNamespaceURIs(nsContext); + + final Document doc = + DocumentHelper.parseText( + xml.replaceAll( + "http://datacite.org/schema/kernel-4", + "http://datacite.org/schema/kernel-3")); + + final String type = doc.valueOf("//dr:CobjCategory/@type"); + final KeyValue collectedFrom = + keyValue( + createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), + doc.valueOf("//oaf:collectedFrom/@name")); + final KeyValue hostedBy = + StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id")) + ? collectedFrom + : keyValue( + createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), + doc.valueOf("//oaf:hostedBy/@name")); + + final DataInfo info = prepareDataInfo(doc); + final long lastUpdateTimestamp = new Date().getTime(); + + return createOafs(doc, type, collectedFrom, hostedBy, info, lastUpdateTimestamp); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + protected List createOafs( + final Document doc, + final String type, + final KeyValue collectedFrom, + final KeyValue hostedBy, + final DataInfo info, + final long lastUpdateTimestamp) { + + final List oafs = new ArrayList<>(); + + switch (type.toLowerCase()) { + case "": + case "publication": + final Publication p = new Publication(); + populateResultFields(p, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + p.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); + p.setJournal(prepareJournal(doc, info)); + oafs.add(p); + break; + case "dataset": + final Dataset d = new Dataset(); + populateResultFields(d, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + d.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); + d.setStoragedate(prepareDatasetStorageDate(doc, info)); + d.setDevice(prepareDatasetDevice(doc, info)); + d.setSize(prepareDatasetSize(doc, info)); + d.setVersion(prepareDatasetVersion(doc, info)); + d.setLastmetadataupdate(prepareDatasetLastMetadataUpdate(doc, info)); + d.setMetadataversionnumber(prepareDatasetMetadataVersionNumber(doc, info)); + d.setGeolocation(prepareDatasetGeoLocations(doc, info)); + oafs.add(d); + break; + case "software": + final Software s = new Software(); + populateResultFields(s, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + s.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); + s.setDocumentationUrl(prepareSoftwareDocumentationUrls(doc, info)); + s.setLicense(prepareSoftwareLicenses(doc, info)); + s.setCodeRepositoryUrl(prepareSoftwareCodeRepositoryUrl(doc, info)); + s.setProgrammingLanguage(prepareSoftwareProgrammingLanguage(doc, info)); + oafs.add(s); + break; + case "otherresearchproducts": + default: + final OtherResearchProduct o = new OtherResearchProduct(); + populateResultFields(o, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + o.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); + o.setContactperson(prepareOtherResearchProductContactPersons(doc, info)); + o.setContactgroup(prepareOtherResearchProductContactGroups(doc, info)); + o.setTool(prepareOtherResearchProductTools(doc, info)); + oafs.add(o); + break; + } + + if (!oafs.isEmpty()) { + oafs.addAll(addProjectRels(doc, collectedFrom, info, lastUpdateTimestamp)); + oafs.addAll(addOtherResultRels(doc, collectedFrom, info, lastUpdateTimestamp)); + } + + return oafs; + } + + private List addProjectRels( + final Document doc, + final KeyValue collectedFrom, + final DataInfo info, + final long lastUpdateTimestamp) { + + final List res = new ArrayList<>(); + + final String docId = createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false); + + for (final Object o : doc.selectNodes("//oaf:projectid")) { + final String projectId = createOpenaireId(40, ((Node) o).getText(), true); + + final Relation r1 = new Relation(); + r1.setRelType("resultProject"); + r1.setSubRelType("outcome"); + r1.setRelClass("isProducedBy"); + r1.setSource(docId); + r1.setTarget(projectId); + r1.setCollectedfrom(Arrays.asList(collectedFrom)); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + res.add(r1); + + final Relation r2 = new Relation(); + r2.setRelType("resultProject"); + r2.setSubRelType("outcome"); + r2.setRelClass("produces"); + r2.setSource(projectId); + r2.setTarget(docId); + r2.setCollectedfrom(Arrays.asList(collectedFrom)); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + res.add(r2); + } + + return res; + } + + protected abstract List addOtherResultRels( + final Document doc, + final KeyValue collectedFrom, + final DataInfo info, + final long lastUpdateTimestamp); + + private void populateResultFields( + final Result r, + final Document doc, + final KeyValue collectedFrom, + final KeyValue hostedBy, + final DataInfo info, + final long lastUpdateTimestamp) { + r.setDataInfo(info); + r.setLastupdatetimestamp(lastUpdateTimestamp); + r.setId(createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false)); + r.setOriginalId(Arrays.asList(doc.valueOf("//dri:objIdentifier"))); + r.setCollectedfrom(Arrays.asList(collectedFrom)); + r.setPid( + prepareListStructProps( + doc, + "//oaf:identifier", + "@identifierType", + "dnet:pid_types", + "dnet:pid_types", + info)); + r.setDateofcollection(doc.valueOf("//dr:dateOfCollection")); + r.setDateoftransformation(doc.valueOf("//dr:dateOfTransformation")); + r.setExtraInfo(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setOaiprovenance(prepareOAIprovenance(doc)); + r.setAuthor(prepareAuthors(doc, info)); + r.setLanguage(prepareLanguages(doc)); + r.setCountry(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setSubject(prepareSubjects(doc, info)); + r.setTitle(prepareTitles(doc, info)); + r.setRelevantdate(prepareRelevantDates(doc, info)); + r.setDescription(prepareDescriptions(doc, info)); + r.setDateofacceptance(prepareField(doc, "//oaf:dateAccepted", info)); + r.setPublisher(preparePublisher(doc, info)); + r.setEmbargoenddate(prepareField(doc, "//oaf:embargoenddate", info)); + r.setSource(prepareSources(doc, info)); + r.setFulltext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setFormat(prepareFormats(doc, info)); + r.setContributor(prepareContributors(doc, info)); + r.setResourcetype(prepareResourceType(doc, info)); + r.setCoverage(prepareCoverages(doc, info)); + r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); + } + + protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); + + protected abstract List prepareInstances( + Document doc, DataInfo info, KeyValue collectedfrom, KeyValue hostedby); + + protected abstract List> prepareSources(Document doc, DataInfo info); + + protected abstract List prepareRelevantDates(Document doc, DataInfo info); + + protected abstract List> prepareCoverages(Document doc, DataInfo info); + + protected abstract List> prepareContributors(Document doc, DataInfo info); + + protected abstract List> prepareFormats(Document doc, DataInfo info); + + protected abstract Field preparePublisher(Document doc, DataInfo info); + + protected abstract List> prepareDescriptions(Document doc, DataInfo info); + + protected abstract List prepareTitles(Document doc, DataInfo info); + + protected abstract List prepareSubjects(Document doc, DataInfo info); + + protected abstract Qualifier prepareLanguages(Document doc); + + protected abstract List prepareAuthors(Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductTools( + Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductContactGroups( + Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductContactPersons( + Document doc, DataInfo info); + + protected abstract Qualifier prepareSoftwareProgrammingLanguage(Document doc, DataInfo info); + + protected abstract Field prepareSoftwareCodeRepositoryUrl(Document doc, DataInfo info); + + protected abstract List prepareSoftwareLicenses( + Document doc, DataInfo info); + + protected abstract List> prepareSoftwareDocumentationUrls( + Document doc, DataInfo info); + + protected abstract List prepareDatasetGeoLocations(Document doc, DataInfo info); + + protected abstract Field prepareDatasetMetadataVersionNumber( + Document doc, DataInfo info); + + protected abstract Field prepareDatasetLastMetadataUpdate(Document doc, DataInfo info); + + protected abstract Field prepareDatasetVersion(Document doc, DataInfo info); + + protected abstract Field prepareDatasetSize(Document doc, DataInfo info); + + protected abstract Field prepareDatasetDevice(Document doc, DataInfo info); + + protected abstract Field prepareDatasetStorageDate(Document doc, DataInfo info); + + private Journal prepareJournal(final Document doc, final DataInfo info) { + final Node n = doc.selectSingleNode("//oaf:journal"); + if (n != null) { + final String name = n.getText(); + final String issnPrinted = n.valueOf("@issn"); + final String issnOnline = n.valueOf("@eissn"); + final String issnLinking = n.valueOf("@lissn"); + final String ep = n.valueOf("@ep"); + final String iss = n.valueOf("@iss"); + final String sp = n.valueOf("@sp"); + final String vol = n.valueOf("@vol"); + final String edition = n.valueOf("@edition"); + if (StringUtils.isNotBlank(name)) { + return journal( + name, + issnPrinted, + issnOnline, + issnLinking, + ep, + iss, + sp, + vol, + edition, + null, + null, + info); + } + } + return null; + } + + protected Qualifier prepareQualifier( + final Node node, final String xpath, final String schemeId, final String schemeName) { + final String classId = node.valueOf(xpath); + final String className = code2name.get(classId); + return qualifier(classId, className, schemeId, schemeName); + } + + protected List prepareListStructProps( + final Node node, + final String xpath, + final String xpathClassId, + final String schemeId, + final String schemeName, + final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + final String classId = n.valueOf(xpathClassId); + final String className = code2name.get(classId); + res.add( + structuredProperty( + n.getText(), classId, className, schemeId, schemeName, info)); + } + return res; + } + + protected List prepareListStructProps( + final Node node, final String xpath, final Qualifier qualifier, final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + res.add(structuredProperty(n.getText(), qualifier, info)); + } + return res; + } + + protected List prepareListStructProps( + final Node node, final String xpath, final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + res.add( + structuredProperty( + n.getText(), + n.valueOf("@classid"), + n.valueOf("@classname"), + n.valueOf("@schemeid"), + n.valueOf("@schemename"), + info)); + } + return res; + } + + protected OAIProvenance prepareOAIprovenance(final Document doc) { + final Node n = + doc.selectSingleNode( + "//*[local-name()='provenance']/*[local-name()='originDescription']"); + + if (n == null) { + return null; + } + + final String identifier = n.valueOf("./*[local-name()='identifier']"); + final String baseURL = n.valueOf("./*[local-name()='baseURL']"); + ; + final String metadataNamespace = n.valueOf("./*[local-name()='metadataNamespace']"); + ; + final boolean altered = n.valueOf("@altered").equalsIgnoreCase("true"); + final String datestamp = n.valueOf("./*[local-name()='datestamp']"); + ; + final String harvestDate = n.valueOf("@harvestDate"); + ; + + return oaiIProvenance( + identifier, baseURL, metadataNamespace, altered, datestamp, harvestDate); + } + + protected DataInfo prepareDataInfo(final Document doc) { + final Node n = doc.selectSingleNode("//oaf:datainfo"); + + if (n == null) { + return dataInfo( + false, + null, + false, + false, + MigrationConstants.REPOSITORY_PROVENANCE_ACTIONS, + "0.9"); + } + + final String paClassId = n.valueOf("./oaf:provenanceaction/@classid"); + final String paClassName = n.valueOf("./oaf:provenanceaction/@classname"); + final String paSchemeId = n.valueOf("./oaf:provenanceaction/@schemeid"); + final String paSchemeName = n.valueOf("./oaf:provenanceaction/@schemename"); + + final boolean deletedbyinference = + Boolean.parseBoolean(n.valueOf("./oaf:deletedbyinference")); + final String inferenceprovenance = n.valueOf("./oaf:inferenceprovenance"); + final Boolean inferred = Boolean.parseBoolean(n.valueOf("./oaf:inferred")); + final String trust = n.valueOf("./oaf:trust"); + + return dataInfo( + deletedbyinference, + inferenceprovenance, + inferred, + false, + qualifier(paClassId, paClassName, paSchemeId, paSchemeName), + trust); + } + + protected Field prepareField(final Node node, final String xpath, final DataInfo info) { + return field(node.valueOf(xpath), info); + } + + protected List> prepareListFields( + final Node node, final String xpath, final DataInfo info) { + return listFields(info, prepareListString(node, xpath)); + } + + protected List prepareListString(final Node node, final String xpath) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final String s = ((Node) o).getText().trim(); + if (StringUtils.isNotBlank(s)) { + res.add(s); + } + } + return res; + } } diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java index eb3a6a8c7..b59056528 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java @@ -10,23 +10,6 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.listKeyValues; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; -import java.io.Closeable; -import java.io.IOException; -import java.sql.Array; -import java.sql.ResultSet; -import java.sql.SQLException; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.List; -import java.util.function.Consumer; -import java.util.function.Function; - -import org.apache.commons.io.IOUtils; -import org.apache.commons.lang3.StringUtils; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; - import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.oa.graph.raw.common.AbstractMigrationApplication; import eu.dnetlib.dhp.oa.graph.raw.common.DbClient; @@ -48,460 +31,531 @@ import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Result; import eu.dnetlib.dhp.schema.oaf.Software; import eu.dnetlib.dhp.schema.oaf.StructuredProperty; +import java.io.Closeable; +import java.io.IOException; +import java.sql.Array; +import java.sql.ResultSet; +import java.sql.SQLException; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Date; +import java.util.List; +import java.util.function.Consumer; +import java.util.function.Function; +import org.apache.commons.io.IOUtils; +import org.apache.commons.lang3.StringUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; public class MigrateDbEntitiesApplication extends AbstractMigrationApplication - implements Closeable { - - private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class); - - private final DbClient dbClient; - - private final long lastUpdateTimestamp; - - public static void main(final String[] args) throws Exception { - final ArgumentApplicationParser parser = - new ArgumentApplicationParser( - IOUtils.toString(MigrateDbEntitiesApplication.class - .getResourceAsStream("/eu/dnetlib/dhp/oa/graph/migrate_db_entities_parameters.json"))); - - parser.parseArgument(args); - - final String dbUrl = parser.get("postgresUrl"); - final String dbUser = parser.get("postgresUser"); - final String dbPassword = parser.get("postgresPassword"); - - final String hdfsPath = parser.get("hdfsPath"); - - final boolean processClaims = - parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims"); - - try (final MigrateDbEntitiesApplication smdbe = - new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser, dbPassword)) { - if (processClaims) { - log.info("Processing claims..."); - smdbe.execute("queryClaims.sql", smdbe::processClaims); - } else { - log.info("Processing datasources..."); - smdbe.execute("queryDatasources.sql", smdbe::processDatasource); - - log.info("Processing projects..."); - smdbe.execute("queryProjects.sql", smdbe::processProject); - - log.info("Processing orgs..."); - smdbe.execute("queryOrganizations.sql", smdbe::processOrganization); - - log.info("Processing relations ds <-> orgs ..."); - smdbe.execute("queryDatasourceOrganization.sql", smdbe::processDatasourceOrganization); - - log.info("Processing projects <-> orgs ..."); - smdbe.execute("queryProjectOrganization.sql", smdbe::processProjectOrganization); - } - log.info("All done."); - } - } - - protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST - super(); - this.dbClient = null; - this.lastUpdateTimestamp = new Date().getTime(); - } - - public MigrateDbEntitiesApplication( - final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword) - throws Exception { - super(hdfsPath); - this.dbClient = new DbClient(dbUrl, dbUser, dbPassword); - this.lastUpdateTimestamp = new Date().getTime(); - } - - public void execute(final String sqlFile, final Function> producer) - throws Exception { - final String sql = - IOUtils.toString(getClass().getResourceAsStream("/eu/dnetlib/dhp/oa/graph/sql/" + sqlFile)); - - final Consumer consumer = rs -> producer.apply(rs).forEach(oaf -> emitOaf(oaf)); - - dbClient.processResults(sql, consumer); - } - - public List processDatasource(final ResultSet rs) { - - try { - - final DataInfo info = prepareDataInfo(rs); - - final Datasource ds = new Datasource(); - - ds.setId(createOpenaireId(10, rs.getString("datasourceid"), true)); - ds.setOriginalId(Arrays.asList(rs.getString("datasourceid"))); - ds.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); - ds.setPid(new ArrayList<>()); - ds.setDateofcollection(asString(rs.getDate("dateofcollection"))); - ds.setDateoftransformation(null); // Value not returned by the SQL query - ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB - ds.setOaiprovenance(null); // Values not present in the DB - ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype"))); - ds.setOpenairecompatibility(prepareQualifierSplitting(rs.getString("openairecompatibility"))); - ds.setOfficialname(field(rs.getString("officialname"), info)); - ds.setEnglishname(field(rs.getString("englishname"), info)); - ds.setWebsiteurl(field(rs.getString("websiteurl"), info)); - ds.setLogourl(field(rs.getString("logourl"), info)); - ds.setContactemail(field(rs.getString("contactemail"), info)); - ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info)); - ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info)); - ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info)); - ds.setDateofvalidation(field(asString(rs.getDate("dateofvalidation")), info)); - ds.setDescription(field(rs.getString("description"), info)); - ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); - ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info)); - ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info)); - ds.setOdpolicies(field(rs.getString("odpolicies"), info)); - ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info)); - ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info)); - ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info)); - ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info)); - ds.setReleaseenddate(field(asString(rs.getDate("releaseenddate")), info)); - ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info)); - ds.setDataprovider(field(rs.getBoolean("dataprovider"), info)); - ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info)); - ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info)); - ds.setDatauploadtype(field(rs.getString("datauploadtype"), info)); - ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info)); - ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info)); - ds.setVersioning(field(rs.getBoolean("versioning"), info)); - ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info)); - ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info)); - ds.setPidsystems(field(rs.getString("pidsystems"), info)); - ds.setCertificates(field(rs.getString("certificates"), info)); - ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array - ds.setJournal(prepareJournal(rs.getString("officialname"), rs.getString("journal"), info)); // Journal - ds.setDataInfo(info); - ds.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(ds); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processProject(final ResultSet rs) { - try { - - final DataInfo info = prepareDataInfo(rs); - - final Project p = new Project(); - - p.setId(createOpenaireId(40, rs.getString("projectid"), true)); - p.setOriginalId(Arrays.asList(rs.getString("projectid"))); - p.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); - p.setPid(new ArrayList<>()); - p.setDateofcollection(asString(rs.getDate("dateofcollection"))); - p.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); - p.setExtraInfo(new ArrayList<>()); // Values not present in the DB - p.setOaiprovenance(null); // Values not present in the DB - p.setWebsiteurl(field(rs.getString("websiteurl"), info)); - p.setCode(field(rs.getString("code"), info)); - p.setAcronym(field(rs.getString("acronym"), info)); - p.setTitle(field(rs.getString("title"), info)); - p.setStartdate(field(asString(rs.getDate("startdate")), info)); - p.setEnddate(field(asString(rs.getDate("enddate")), info)); - p.setCallidentifier(field(rs.getString("callidentifier"), info)); - p.setKeywords(field(rs.getString("keywords"), info)); - p.setDuration(field(Integer.toString(rs.getInt("duration")), info)); - p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info)); - p.setOamandatepublications(field(Boolean.toString(rs.getBoolean("oamandatepublications")), info)); - p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info)); - p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); - p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info)); - p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype"))); - p.setOptional1(field(rs.getString("optional1"), info)); - p.setOptional2(field(rs.getString("optional2"), info)); - p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info)); - p.setContactfullname(field(rs.getString("contactfullname"), info)); - p.setContactfax(field(rs.getString("contactfax"), info)); - p.setContactphone(field(rs.getString("contactphone"), info)); - p.setContactemail(field(rs.getString("contactemail"), info)); - p.setSummary(field(rs.getString("summary"), info)); - p.setCurrency(field(rs.getString("currency"), info)); - p.setTotalcost(new Float(rs.getDouble("totalcost"))); - p.setFundedamount(new Float(rs.getDouble("fundedamount"))); - p.setDataInfo(info); - p.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(p); - - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processOrganization(final ResultSet rs) { - - try { - - final DataInfo info = prepareDataInfo(rs); - - final Organization o = new Organization(); - - o.setId(createOpenaireId(20, rs.getString("organizationid"), true)); - o.setOriginalId(Arrays.asList(rs.getString("organizationid"))); - o.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); - o.setPid(new ArrayList<>()); - o.setDateofcollection(asString(rs.getDate("dateofcollection"))); - o.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); - o.setExtraInfo(new ArrayList<>()); // Values not present in the DB - o.setOaiprovenance(null); // Values not present in the DB - o.setLegalshortname(field(rs.getString("legalshortname"), info)); - o.setLegalname(field(rs.getString("legalname"), info)); - o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query - o.setWebsiteurl(field(rs.getString("websiteurl"), info)); - o.setLogourl(field(rs.getString("logourl"), info)); - o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info)); - o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info)); - o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info)); - o.setEcresearchorganization(field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info)); - o.setEchighereducation(field(Boolean.toString(rs.getBoolean("echighereducation")), info)); - o.setEcinternationalorganizationeurinterests(field(Boolean.toString(rs.getBoolean("ecinternationalorganizationeurinterests")), info)); - o.setEcinternationalorganization(field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info)); - o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info)); - o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info)); - o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info)); - o.setCountry(prepareQualifierSplitting(rs.getString("country"))); - o.setDataInfo(info); - o.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(o); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processDatasourceOrganization(final ResultSet rs) { - try { - final DataInfo info = prepareDataInfo(rs); - final String orgId = createOpenaireId(20, rs.getString("organization"), true); - final String dsId = createOpenaireId(10, rs.getString("datasource"), true); - final List collectedFrom = - listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname")); - - final Relation r1 = new Relation(); - r1.setRelType("datasourceOrganization"); - r1.setSubRelType("provision"); - r1.setRelClass("isProvidedBy"); - r1.setSource(dsId); - r1.setTarget(orgId); - r1.setCollectedfrom(collectedFrom); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - final Relation r2 = new Relation(); - r2.setRelType("datasourceOrganization"); - r2.setSubRelType("provision"); - r2.setRelClass("provides"); - r2.setSource(orgId); - r2.setTarget(dsId); - r2.setCollectedfrom(collectedFrom); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processProjectOrganization(final ResultSet rs) { - try { - final DataInfo info = prepareDataInfo(rs); - final String orgId = createOpenaireId(20, rs.getString("resporganization"), true); - final String projectId = createOpenaireId(40, rs.getString("project"), true); - final List collectedFrom = - listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname")); - - final Relation r1 = new Relation(); - r1.setRelType("projectOrganization"); - r1.setSubRelType("participation"); - r1.setRelClass("isParticipant"); - r1.setSource(projectId); - r1.setTarget(orgId); - r1.setCollectedfrom(collectedFrom); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - final Relation r2 = new Relation(); - r2.setRelType("projectOrganization"); - r2.setSubRelType("participation"); - r2.setRelClass("hasParticipant"); - r2.setSource(orgId); - r2.setTarget(projectId); - r2.setCollectedfrom(collectedFrom); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processClaims(final ResultSet rs) { - - final DataInfo info = - dataInfo(false, null, false, false, qualifier("user:claim", "user:claim", "dnet:provenanceActions", "dnet:provenanceActions"), "0.9"); - - final List collectedFrom = - listKeyValues(createOpenaireId(10, "infrastruct_::openaire", true), "OpenAIRE"); - - try { - - if (rs.getString("source_type").equals("context")) { - final Result r; - - if (rs.getString("target_type").equals("dataset")) { - r = new Dataset(); - r.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); - } else if (rs.getString("target_type").equals("software")) { - r = new Software(); - r.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); - } else if (rs.getString("target_type").equals("other")) { - r = new OtherResearchProduct(); - r.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); - } else { - r = new Publication(); - r.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); - } - r.setId(createOpenaireId(50, rs.getString("target_id"), false)); - r.setLastupdatetimestamp(lastUpdateTimestamp); - r.setContext(prepareContext(rs.getString("source_id"), info)); - r.setDataInfo(info); - r.setCollectedfrom(collectedFrom); - - return Arrays.asList(r); - } else { - final String sourceId = - createOpenaireId(rs.getString("source_type"), rs.getString("source_id"), false); - final String targetId = - createOpenaireId(rs.getString("target_type"), rs.getString("target_id"), false); - - final Relation r1 = new Relation(); - final Relation r2 = new Relation(); - - if (rs.getString("source_type").equals("project")) { - r1.setCollectedfrom(collectedFrom); - r1.setRelType("resultProject"); - r1.setSubRelType("outcome"); - r1.setRelClass("produces"); - - r2.setCollectedfrom(collectedFrom); - r2.setRelType("resultProject"); - r2.setSubRelType("outcome"); - r2.setRelClass("isProducedBy"); - } else { - r1.setCollectedfrom(collectedFrom); - r1.setRelType("resultResult"); - r1.setSubRelType("relationship"); - r1.setRelClass("isRelatedTo"); - - r2.setCollectedfrom(collectedFrom); - r2.setRelType("resultResult"); - r2.setSubRelType("relationship"); - r2.setRelClass("isRelatedTo"); - } - - r1.setSource(sourceId); - r1.setTarget(targetId); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - r2.setSource(targetId); - r2.setTarget(sourceId); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } - - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - private List prepareContext(final String id, final DataInfo dataInfo) { - final Context context = new Context(); - context.setId(id); - context.setDataInfo(Arrays.asList(dataInfo)); - return Arrays.asList(context); - } - - private DataInfo prepareDataInfo(final ResultSet rs) throws SQLException { - final Boolean deletedbyinference = rs.getBoolean("deletedbyinference"); - final String inferenceprovenance = rs.getString("inferenceprovenance"); - final Boolean inferred = rs.getBoolean("inferred"); - final String trust = rs.getString("trust"); - return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, MigrationConstants.ENTITYREGISTRY_PROVENANCE_ACTION, trust); - } - - private Qualifier prepareQualifierSplitting(final String s) { - if (StringUtils.isBlank(s)) { return null; } - final String[] arr = s.split("@@@"); - return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null; - } - - private List> prepareListFields(final Array array, final DataInfo info) { - try { - return array != null - ? listFields(info, (String[]) array.getArray()) - : new ArrayList<>(); - } catch (final SQLException e) { - throw new RuntimeException("Invalid SQL array", e); - } - } - - private StructuredProperty prepareStructProp(final String s, final DataInfo dataInfo) { - if (StringUtils.isBlank(s)) { return null; } - final String[] parts = s.split("###"); - if (parts.length == 2) { - final String value = parts[0]; - final String[] arr = parts[1].split("@@@"); - if (arr.length == 4) { return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); } - } - return null; - } - - private List prepareListOfStructProps( - final Array array, - final DataInfo dataInfo) throws SQLException { - final List res = new ArrayList<>(); - if (array != null) { - for (final String s : (String[]) array.getArray()) { - final StructuredProperty sp = prepareStructProp(s, dataInfo); - if (sp != null) { - res.add(sp); - } - } - } - - return res; - } - - private Journal prepareJournal(final String name, final String sj, final DataInfo info) { - if (StringUtils.isNotBlank(sj)) { - final String[] arr = sj.split("@@@"); - if (arr.length == 3) { - final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null; - final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null;; - final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null;; - if (issn != null || eissn != null || lissn != null) { - return journal(name, issn, eissn, eissn, null, null, null, null, null, null, null, info); - } - } - } - return null; - } - - @Override - public void close() throws IOException { - super.close(); - dbClient.close(); - } + implements Closeable { + + private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class); + + private final DbClient dbClient; + + private final long lastUpdateTimestamp; + + public static void main(final String[] args) throws Exception { + final ArgumentApplicationParser parser = + new ArgumentApplicationParser( + IOUtils.toString( + MigrateDbEntitiesApplication.class.getResourceAsStream( + "/eu/dnetlib/dhp/oa/graph/migrate_db_entities_parameters.json"))); + + parser.parseArgument(args); + + final String dbUrl = parser.get("postgresUrl"); + final String dbUser = parser.get("postgresUser"); + final String dbPassword = parser.get("postgresPassword"); + + final String hdfsPath = parser.get("hdfsPath"); + + final boolean processClaims = + parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims"); + + try (final MigrateDbEntitiesApplication smdbe = + new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser, dbPassword)) { + if (processClaims) { + log.info("Processing claims..."); + smdbe.execute("queryClaims.sql", smdbe::processClaims); + } else { + log.info("Processing datasources..."); + smdbe.execute("queryDatasources.sql", smdbe::processDatasource); + + log.info("Processing projects..."); + smdbe.execute("queryProjects.sql", smdbe::processProject); + + log.info("Processing orgs..."); + smdbe.execute("queryOrganizations.sql", smdbe::processOrganization); + + log.info("Processing relations ds <-> orgs ..."); + smdbe.execute( + "queryDatasourceOrganization.sql", smdbe::processDatasourceOrganization); + + log.info("Processing projects <-> orgs ..."); + smdbe.execute("queryProjectOrganization.sql", smdbe::processProjectOrganization); + } + log.info("All done."); + } + } + + protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST + super(); + this.dbClient = null; + this.lastUpdateTimestamp = new Date().getTime(); + } + + public MigrateDbEntitiesApplication( + final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword) + throws Exception { + super(hdfsPath); + this.dbClient = new DbClient(dbUrl, dbUser, dbPassword); + this.lastUpdateTimestamp = new Date().getTime(); + } + + public void execute(final String sqlFile, final Function> producer) + throws Exception { + final String sql = + IOUtils.toString( + getClass().getResourceAsStream("/eu/dnetlib/dhp/oa/graph/sql/" + sqlFile)); + + final Consumer consumer = rs -> producer.apply(rs).forEach(oaf -> emitOaf(oaf)); + + dbClient.processResults(sql, consumer); + } + + public List processDatasource(final ResultSet rs) { + + try { + + final DataInfo info = prepareDataInfo(rs); + + final Datasource ds = new Datasource(); + + ds.setId(createOpenaireId(10, rs.getString("datasourceid"), true)); + ds.setOriginalId(Arrays.asList(rs.getString("datasourceid"))); + ds.setCollectedfrom( + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname"))); + ds.setPid(new ArrayList<>()); + ds.setDateofcollection(asString(rs.getDate("dateofcollection"))); + ds.setDateoftransformation(null); // Value not returned by the SQL query + ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB + ds.setOaiprovenance(null); // Values not present in the DB + ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype"))); + ds.setOpenairecompatibility( + prepareQualifierSplitting(rs.getString("openairecompatibility"))); + ds.setOfficialname(field(rs.getString("officialname"), info)); + ds.setEnglishname(field(rs.getString("englishname"), info)); + ds.setWebsiteurl(field(rs.getString("websiteurl"), info)); + ds.setLogourl(field(rs.getString("logourl"), info)); + ds.setContactemail(field(rs.getString("contactemail"), info)); + ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info)); + ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info)); + ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info)); + ds.setDateofvalidation(field(asString(rs.getDate("dateofvalidation")), info)); + ds.setDescription(field(rs.getString("description"), info)); + ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); + ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info)); + ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info)); + ds.setOdpolicies(field(rs.getString("odpolicies"), info)); + ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info)); + ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info)); + ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info)); + ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info)); + ds.setReleaseenddate(field(asString(rs.getDate("releaseenddate")), info)); + ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info)); + ds.setDataprovider(field(rs.getBoolean("dataprovider"), info)); + ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info)); + ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info)); + ds.setDatauploadtype(field(rs.getString("datauploadtype"), info)); + ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info)); + ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info)); + ds.setVersioning(field(rs.getBoolean("versioning"), info)); + ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info)); + ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info)); + ds.setPidsystems(field(rs.getString("pidsystems"), info)); + ds.setCertificates(field(rs.getString("certificates"), info)); + ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array + ds.setJournal( + prepareJournal( + rs.getString("officialname"), + rs.getString("journal"), + info)); // Journal + ds.setDataInfo(info); + ds.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(ds); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processProject(final ResultSet rs) { + try { + + final DataInfo info = prepareDataInfo(rs); + + final Project p = new Project(); + + p.setId(createOpenaireId(40, rs.getString("projectid"), true)); + p.setOriginalId(Arrays.asList(rs.getString("projectid"))); + p.setCollectedfrom( + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname"))); + p.setPid(new ArrayList<>()); + p.setDateofcollection(asString(rs.getDate("dateofcollection"))); + p.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); + p.setExtraInfo(new ArrayList<>()); // Values not present in the DB + p.setOaiprovenance(null); // Values not present in the DB + p.setWebsiteurl(field(rs.getString("websiteurl"), info)); + p.setCode(field(rs.getString("code"), info)); + p.setAcronym(field(rs.getString("acronym"), info)); + p.setTitle(field(rs.getString("title"), info)); + p.setStartdate(field(asString(rs.getDate("startdate")), info)); + p.setEnddate(field(asString(rs.getDate("enddate")), info)); + p.setCallidentifier(field(rs.getString("callidentifier"), info)); + p.setKeywords(field(rs.getString("keywords"), info)); + p.setDuration(field(Integer.toString(rs.getInt("duration")), info)); + p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info)); + p.setOamandatepublications( + field(Boolean.toString(rs.getBoolean("oamandatepublications")), info)); + p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info)); + p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); + p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info)); + p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype"))); + p.setOptional1(field(rs.getString("optional1"), info)); + p.setOptional2(field(rs.getString("optional2"), info)); + p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info)); + p.setContactfullname(field(rs.getString("contactfullname"), info)); + p.setContactfax(field(rs.getString("contactfax"), info)); + p.setContactphone(field(rs.getString("contactphone"), info)); + p.setContactemail(field(rs.getString("contactemail"), info)); + p.setSummary(field(rs.getString("summary"), info)); + p.setCurrency(field(rs.getString("currency"), info)); + p.setTotalcost(new Float(rs.getDouble("totalcost"))); + p.setFundedamount(new Float(rs.getDouble("fundedamount"))); + p.setDataInfo(info); + p.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(p); + + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processOrganization(final ResultSet rs) { + + try { + + final DataInfo info = prepareDataInfo(rs); + + final Organization o = new Organization(); + + o.setId(createOpenaireId(20, rs.getString("organizationid"), true)); + o.setOriginalId(Arrays.asList(rs.getString("organizationid"))); + o.setCollectedfrom( + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname"))); + o.setPid(new ArrayList<>()); + o.setDateofcollection(asString(rs.getDate("dateofcollection"))); + o.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); + o.setExtraInfo(new ArrayList<>()); // Values not present in the DB + o.setOaiprovenance(null); // Values not present in the DB + o.setLegalshortname(field(rs.getString("legalshortname"), info)); + o.setLegalname(field(rs.getString("legalname"), info)); + o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query + o.setWebsiteurl(field(rs.getString("websiteurl"), info)); + o.setLogourl(field(rs.getString("logourl"), info)); + o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info)); + o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info)); + o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info)); + o.setEcresearchorganization( + field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info)); + o.setEchighereducation( + field(Boolean.toString(rs.getBoolean("echighereducation")), info)); + o.setEcinternationalorganizationeurinterests( + field( + Boolean.toString( + rs.getBoolean("ecinternationalorganizationeurinterests")), + info)); + o.setEcinternationalorganization( + field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info)); + o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info)); + o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info)); + o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info)); + o.setCountry(prepareQualifierSplitting(rs.getString("country"))); + o.setDataInfo(info); + o.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(o); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processDatasourceOrganization(final ResultSet rs) { + try { + final DataInfo info = prepareDataInfo(rs); + final String orgId = createOpenaireId(20, rs.getString("organization"), true); + final String dsId = createOpenaireId(10, rs.getString("datasource"), true); + final List collectedFrom = + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname")); + + final Relation r1 = new Relation(); + r1.setRelType("datasourceOrganization"); + r1.setSubRelType("provision"); + r1.setRelClass("isProvidedBy"); + r1.setSource(dsId); + r1.setTarget(orgId); + r1.setCollectedfrom(collectedFrom); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + final Relation r2 = new Relation(); + r2.setRelType("datasourceOrganization"); + r2.setSubRelType("provision"); + r2.setRelClass("provides"); + r2.setSource(orgId); + r2.setTarget(dsId); + r2.setCollectedfrom(collectedFrom); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processProjectOrganization(final ResultSet rs) { + try { + final DataInfo info = prepareDataInfo(rs); + final String orgId = createOpenaireId(20, rs.getString("resporganization"), true); + final String projectId = createOpenaireId(40, rs.getString("project"), true); + final List collectedFrom = + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname")); + + final Relation r1 = new Relation(); + r1.setRelType("projectOrganization"); + r1.setSubRelType("participation"); + r1.setRelClass("isParticipant"); + r1.setSource(projectId); + r1.setTarget(orgId); + r1.setCollectedfrom(collectedFrom); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + final Relation r2 = new Relation(); + r2.setRelType("projectOrganization"); + r2.setSubRelType("participation"); + r2.setRelClass("hasParticipant"); + r2.setSource(orgId); + r2.setTarget(projectId); + r2.setCollectedfrom(collectedFrom); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processClaims(final ResultSet rs) { + + final DataInfo info = + dataInfo( + false, + null, + false, + false, + qualifier( + "user:claim", + "user:claim", + "dnet:provenanceActions", + "dnet:provenanceActions"), + "0.9"); + + final List collectedFrom = + listKeyValues(createOpenaireId(10, "infrastruct_::openaire", true), "OpenAIRE"); + + try { + + if (rs.getString("source_type").equals("context")) { + final Result r; + + if (rs.getString("target_type").equals("dataset")) { + r = new Dataset(); + r.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); + } else if (rs.getString("target_type").equals("software")) { + r = new Software(); + r.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); + } else if (rs.getString("target_type").equals("other")) { + r = new OtherResearchProduct(); + r.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); + } else { + r = new Publication(); + r.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); + } + r.setId(createOpenaireId(50, rs.getString("target_id"), false)); + r.setLastupdatetimestamp(lastUpdateTimestamp); + r.setContext(prepareContext(rs.getString("source_id"), info)); + r.setDataInfo(info); + r.setCollectedfrom(collectedFrom); + + return Arrays.asList(r); + } else { + final String sourceId = + createOpenaireId( + rs.getString("source_type"), rs.getString("source_id"), false); + final String targetId = + createOpenaireId( + rs.getString("target_type"), rs.getString("target_id"), false); + + final Relation r1 = new Relation(); + final Relation r2 = new Relation(); + + if (rs.getString("source_type").equals("project")) { + r1.setCollectedfrom(collectedFrom); + r1.setRelType("resultProject"); + r1.setSubRelType("outcome"); + r1.setRelClass("produces"); + + r2.setCollectedfrom(collectedFrom); + r2.setRelType("resultProject"); + r2.setSubRelType("outcome"); + r2.setRelClass("isProducedBy"); + } else { + r1.setCollectedfrom(collectedFrom); + r1.setRelType("resultResult"); + r1.setSubRelType("relationship"); + r1.setRelClass("isRelatedTo"); + + r2.setCollectedfrom(collectedFrom); + r2.setRelType("resultResult"); + r2.setSubRelType("relationship"); + r2.setRelClass("isRelatedTo"); + } + + r1.setSource(sourceId); + r1.setTarget(targetId); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + r2.setSource(targetId); + r2.setTarget(sourceId); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } + + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + private List prepareContext(final String id, final DataInfo dataInfo) { + final Context context = new Context(); + context.setId(id); + context.setDataInfo(Arrays.asList(dataInfo)); + return Arrays.asList(context); + } + + private DataInfo prepareDataInfo(final ResultSet rs) throws SQLException { + final Boolean deletedbyinference = rs.getBoolean("deletedbyinference"); + final String inferenceprovenance = rs.getString("inferenceprovenance"); + final Boolean inferred = rs.getBoolean("inferred"); + final String trust = rs.getString("trust"); + return dataInfo( + deletedbyinference, + inferenceprovenance, + inferred, + false, + MigrationConstants.ENTITYREGISTRY_PROVENANCE_ACTION, + trust); + } + + private Qualifier prepareQualifierSplitting(final String s) { + if (StringUtils.isBlank(s)) { + return null; + } + final String[] arr = s.split("@@@"); + return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null; + } + + private List> prepareListFields(final Array array, final DataInfo info) { + try { + return array != null + ? listFields(info, (String[]) array.getArray()) + : new ArrayList<>(); + } catch (final SQLException e) { + throw new RuntimeException("Invalid SQL array", e); + } + } + + private StructuredProperty prepareStructProp(final String s, final DataInfo dataInfo) { + if (StringUtils.isBlank(s)) { + return null; + } + final String[] parts = s.split("###"); + if (parts.length == 2) { + final String value = parts[0]; + final String[] arr = parts[1].split("@@@"); + if (arr.length == 4) { + return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); + } + } + return null; + } + + private List prepareListOfStructProps( + final Array array, final DataInfo dataInfo) throws SQLException { + final List res = new ArrayList<>(); + if (array != null) { + for (final String s : (String[]) array.getArray()) { + final StructuredProperty sp = prepareStructProp(s, dataInfo); + if (sp != null) { + res.add(sp); + } + } + } + + return res; + } + + private Journal prepareJournal(final String name, final String sj, final DataInfo info) { + if (StringUtils.isNotBlank(sj)) { + final String[] arr = sj.split("@@@"); + if (arr.length == 3) { + final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null; + final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null; + ; + final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null; + ; + if (issn != null || eissn != null || lissn != null) { + return journal( + name, issn, eissn, eissn, null, null, null, null, null, null, null, + info); + } + } + } + return null; + } + + @Override + public void close() throws IOException { + super.close(); + dbClient.close(); + } } diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java index f9ff105b0..2f31b1e03 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java @@ -6,17 +6,28 @@ import eu.dnetlib.dhp.schema.oaf.Qualifier; public class MigrationConstants { - public static final Qualifier PUBLICATION_RESULTTYPE_QUALIFIER = - qualifier("publication", "publication", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier DATASET_RESULTTYPE_QUALIFIER = - qualifier("dataset", "dataset", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier SOFTWARE_RESULTTYPE_QUALIFIER = - qualifier("software", "software", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier OTHER_RESULTTYPE_QUALIFIER = - qualifier("other", "other", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier REPOSITORY_PROVENANCE_ACTIONS = - qualifier("sysimport:crosswalk:repository", "sysimport:crosswalk:repository", "dnet:provenanceActions", "dnet:provenanceActions"); - public static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = - qualifier("sysimport:crosswalk:entityregistry", "sysimport:crosswalk:entityregistry", "dnet:provenanceActions", "dnet:provenanceActions"); - + public static final Qualifier PUBLICATION_RESULTTYPE_QUALIFIER = + qualifier( + "publication", + "publication", + "dnet:result_typologies", + "dnet:result_typologies"); + public static final Qualifier DATASET_RESULTTYPE_QUALIFIER = + qualifier("dataset", "dataset", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier SOFTWARE_RESULTTYPE_QUALIFIER = + qualifier("software", "software", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier OTHER_RESULTTYPE_QUALIFIER = + qualifier("other", "other", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier REPOSITORY_PROVENANCE_ACTIONS = + qualifier( + "sysimport:crosswalk:repository", + "sysimport:crosswalk:repository", + "dnet:provenanceActions", + "dnet:provenanceActions"); + public static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = + qualifier( + "sysimport:crosswalk:entityregistry", + "sysimport:crosswalk:entityregistry", + "dnet:provenanceActions", + "dnet:provenanceActions"); } From 885105081440694c42828eb14f8541fb4910f763 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Thu, 23 Apr 2020 08:36:40 +0200 Subject: [PATCH 08/17] replaced hive_db_name with hiveDbName --- .../dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql index 9a8a70770..6c49679cd 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql @@ -1,4 +1,4 @@ -DROP VIEW IF EXISTS ${hive_db_name}.result; +DROP VIEW IF EXISTS ${hiveDbName}.result; CREATE VIEW IF NOT EXISTS result as select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.publication p From d920ce501ea9919c588e48b3a8e64eecb3655338 Mon Sep 17 00:00:00 2001 From: "michele.artini" Date: Thu, 23 Apr 2020 16:18:40 +0200 Subject: [PATCH 09/17] fixed a problem with missing instances --- .../raw/AbstractMdRecordToOafMapper.java | 826 ++++++++------- .../raw/MigrateDbEntitiesApplication.java | 996 +++++++++--------- .../dhp/oa/graph/raw/OdfToOafMapper.java | 74 +- .../graph/raw/common/MigrationConstants.java | 37 +- .../dnetlib/dhp/oa/graph/raw/MappersTest.java | 3 + 5 files changed, 1032 insertions(+), 904 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java index 5374a69e8..3519cd88d 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java @@ -10,19 +10,6 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.oaiIProvenance; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.HashMap; -import java.util.List; -import java.util.Map; - -import org.apache.commons.lang3.StringUtils; -import org.dom4j.Document; -import org.dom4j.DocumentFactory; -import org.dom4j.DocumentHelper; -import org.dom4j.Node; - import eu.dnetlib.dhp.oa.graph.raw.common.MigrationConstants; import eu.dnetlib.dhp.schema.oaf.Author; import eu.dnetlib.dhp.schema.oaf.DataInfo; @@ -41,388 +28,439 @@ import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Result; import eu.dnetlib.dhp.schema.oaf.Software; import eu.dnetlib.dhp.schema.oaf.StructuredProperty; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Date; +import java.util.HashMap; +import java.util.List; +import java.util.Map; +import org.apache.commons.lang3.StringUtils; +import org.dom4j.Document; +import org.dom4j.DocumentFactory; +import org.dom4j.DocumentHelper; +import org.dom4j.Node; public abstract class AbstractMdRecordToOafMapper { - protected final Map code2name; - - protected static final Qualifier MAIN_TITLE_QUALIFIER = - qualifier("main title", "main title", "dnet:dataCite_title", "dnet:dataCite_title"); - - protected AbstractMdRecordToOafMapper(final Map code2name) { - this.code2name = code2name; - } - - public List processMdRecord(final String xml) { - try { - final Map nsContext = new HashMap<>(); - nsContext.put("dr", "http://www.driver-repository.eu/namespace/dr"); - nsContext.put("dri", "http://www.driver-repository.eu/namespace/dri"); - nsContext.put("oaf", "http://namespace.openaire.eu/oaf"); - nsContext.put("oai", "http://www.openarchives.org/OAI/2.0/"); - nsContext.put("prov", "http://www.openarchives.org/OAI/2.0/provenance"); - nsContext.put("dc", "http://purl.org/dc/elements/1.1/"); - nsContext.put("datacite", "http://datacite.org/schema/kernel-3"); - DocumentFactory.getInstance().setXPathNamespaceURIs(nsContext); - - final Document doc = - DocumentHelper.parseText(xml.replaceAll("http://datacite.org/schema/kernel-4", "http://datacite.org/schema/kernel-3")); - - final String type = doc.valueOf("//dr:CobjCategory/@type"); - final KeyValue collectedFrom = - keyValue(createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), doc.valueOf("//oaf:collectedFrom/@name")); - final KeyValue hostedBy = - StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id")) - ? collectedFrom - : keyValue(createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), doc.valueOf("//oaf:hostedBy/@name")); - - final DataInfo info = prepareDataInfo(doc); - final long lastUpdateTimestamp = new Date().getTime(); - - return createOafs(doc, type, collectedFrom, hostedBy, info, lastUpdateTimestamp); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - protected List createOafs( - final Document doc, - final String type, - final KeyValue collectedFrom, - final KeyValue hostedBy, - final DataInfo info, - final long lastUpdateTimestamp) { - - final List oafs = new ArrayList<>(); - - switch (type.toLowerCase()) { - case "": - case "publication": - final Publication p = new Publication(); - populateResultFields(p, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - p.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); - p.setJournal(prepareJournal(doc, info)); - oafs.add(p); - break; - case "dataset": - final Dataset d = new Dataset(); - populateResultFields(d, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - d.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); - d.setStoragedate(prepareDatasetStorageDate(doc, info)); - d.setDevice(prepareDatasetDevice(doc, info)); - d.setSize(prepareDatasetSize(doc, info)); - d.setVersion(prepareDatasetVersion(doc, info)); - d.setLastmetadataupdate(prepareDatasetLastMetadataUpdate(doc, info)); - d.setMetadataversionnumber(prepareDatasetMetadataVersionNumber(doc, info)); - d.setGeolocation(prepareDatasetGeoLocations(doc, info)); - oafs.add(d); - break; - case "software": - final Software s = new Software(); - populateResultFields(s, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - s.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); - s.setDocumentationUrl(prepareSoftwareDocumentationUrls(doc, info)); - s.setLicense(prepareSoftwareLicenses(doc, info)); - s.setCodeRepositoryUrl(prepareSoftwareCodeRepositoryUrl(doc, info)); - s.setProgrammingLanguage(prepareSoftwareProgrammingLanguage(doc, info)); - oafs.add(s); - break; - case "otherresearchproducts": - default: - final OtherResearchProduct o = new OtherResearchProduct(); - populateResultFields(o, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); - o.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); - o.setContactperson(prepareOtherResearchProductContactPersons(doc, info)); - o.setContactgroup(prepareOtherResearchProductContactGroups(doc, info)); - o.setTool(prepareOtherResearchProductTools(doc, info)); - oafs.add(o); - break; - } - - if (!oafs.isEmpty()) { - oafs.addAll(addProjectRels(doc, collectedFrom, info, lastUpdateTimestamp)); - oafs.addAll(addOtherResultRels(doc, collectedFrom, info, lastUpdateTimestamp)); - } - - return oafs; - } - - private List addProjectRels( - final Document doc, - final KeyValue collectedFrom, - final DataInfo info, - final long lastUpdateTimestamp) { - - final List res = new ArrayList<>(); - - final String docId = createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false); - - for (final Object o : doc.selectNodes("//oaf:projectid")) { - final String projectId = createOpenaireId(40, ((Node) o).getText(), true); - - final Relation r1 = new Relation(); - r1.setRelType("resultProject"); - r1.setSubRelType("outcome"); - r1.setRelClass("isProducedBy"); - r1.setSource(docId); - r1.setTarget(projectId); - r1.setCollectedfrom(Arrays.asList(collectedFrom)); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - res.add(r1); - - final Relation r2 = new Relation(); - r2.setRelType("resultProject"); - r2.setSubRelType("outcome"); - r2.setRelClass("produces"); - r2.setSource(projectId); - r2.setTarget(docId); - r2.setCollectedfrom(Arrays.asList(collectedFrom)); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - res.add(r2); - } - - return res; - } - - protected abstract List addOtherResultRels( - final Document doc, - final KeyValue collectedFrom, - final DataInfo info, - final long lastUpdateTimestamp); - - private void populateResultFields( - final Result r, - final Document doc, - final KeyValue collectedFrom, - final KeyValue hostedBy, - final DataInfo info, - final long lastUpdateTimestamp) { - r.setDataInfo(info); - r.setLastupdatetimestamp(lastUpdateTimestamp); - r.setId(createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false)); - r.setOriginalId(Arrays.asList(doc.valueOf("//dri:objIdentifier"))); - r.setCollectedfrom(Arrays.asList(collectedFrom)); - r.setPid(prepareListStructProps(doc, "//oaf:identifier", "@identifierType", "dnet:pid_types", "dnet:pid_types", info)); - r.setDateofcollection(doc.valueOf("//dr:dateOfCollection")); - r.setDateoftransformation(doc.valueOf("//dr:dateOfTransformation")); - r.setExtraInfo(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setOaiprovenance(prepareOAIprovenance(doc)); - r.setAuthor(prepareAuthors(doc, info)); - r.setLanguage(prepareLanguages(doc)); - r.setCountry(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setSubject(prepareSubjects(doc, info)); - r.setTitle(prepareTitles(doc, info)); - r.setRelevantdate(prepareRelevantDates(doc, info)); - r.setDescription(prepareDescriptions(doc, info)); - r.setDateofacceptance(prepareField(doc, "//oaf:dateAccepted", info)); - r.setPublisher(preparePublisher(doc, info)); - r.setEmbargoenddate(prepareField(doc, "//oaf:embargoenddate", info)); - r.setSource(prepareSources(doc, info)); - r.setFulltext(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setFormat(prepareFormats(doc, info)); - r.setContributor(prepareContributors(doc, info)); - r.setResourcetype(prepareResourceType(doc, info)); - r.setCoverage(prepareCoverages(doc, info)); - r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES - r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); - } - - protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); - - protected abstract List prepareInstances( - Document doc, - DataInfo info, - KeyValue collectedfrom, - KeyValue hostedby); - - protected abstract List> prepareSources(Document doc, DataInfo info); - - protected abstract List prepareRelevantDates(Document doc, DataInfo info); - - protected abstract List> prepareCoverages(Document doc, DataInfo info); - - protected abstract List> prepareContributors(Document doc, DataInfo info); - - protected abstract List> prepareFormats(Document doc, DataInfo info); - - protected abstract Field preparePublisher(Document doc, DataInfo info); - - protected abstract List> prepareDescriptions(Document doc, DataInfo info); - - protected abstract List prepareTitles(Document doc, DataInfo info); - - protected abstract List prepareSubjects(Document doc, DataInfo info); - - protected abstract Qualifier prepareLanguages(Document doc); - - protected abstract List prepareAuthors(Document doc, DataInfo info); - - protected abstract List> prepareOtherResearchProductTools( - Document doc, - DataInfo info); - - protected abstract List> prepareOtherResearchProductContactGroups( - Document doc, - DataInfo info); - - protected abstract List> prepareOtherResearchProductContactPersons( - Document doc, - DataInfo info); - - protected abstract Qualifier prepareSoftwareProgrammingLanguage(Document doc, DataInfo info); - - protected abstract Field prepareSoftwareCodeRepositoryUrl(Document doc, DataInfo info); - - protected abstract List prepareSoftwareLicenses( - Document doc, - DataInfo info); - - protected abstract List> prepareSoftwareDocumentationUrls( - Document doc, - DataInfo info); - - protected abstract List prepareDatasetGeoLocations(Document doc, DataInfo info); - - protected abstract Field prepareDatasetMetadataVersionNumber( - Document doc, - DataInfo info); - - protected abstract Field prepareDatasetLastMetadataUpdate(Document doc, DataInfo info); - - protected abstract Field prepareDatasetVersion(Document doc, DataInfo info); - - protected abstract Field prepareDatasetSize(Document doc, DataInfo info); - - protected abstract Field prepareDatasetDevice(Document doc, DataInfo info); - - protected abstract Field prepareDatasetStorageDate(Document doc, DataInfo info); - - private Journal prepareJournal(final Document doc, final DataInfo info) { - final Node n = doc.selectSingleNode("//oaf:journal"); - if (n != null) { - final String name = n.getText(); - final String issnPrinted = n.valueOf("@issn"); - final String issnOnline = n.valueOf("@eissn"); - final String issnLinking = n.valueOf("@lissn"); - final String ep = n.valueOf("@ep"); - final String iss = n.valueOf("@iss"); - final String sp = n.valueOf("@sp"); - final String vol = n.valueOf("@vol"); - final String edition = n.valueOf("@edition"); - if (StringUtils.isNotBlank(name)) { return journal(name, issnPrinted, issnOnline, issnLinking, ep, iss, sp, vol, edition, null, null, info); } - } - return null; - } - - protected Qualifier prepareQualifier( - final Node node, - final String xpath, - final String schemeId, - final String schemeName) { - final String classId = node.valueOf(xpath); - final String className = code2name.get(classId); - return qualifier(classId, className, schemeId, schemeName); - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final String xpathClassId, - final String schemeId, - final String schemeName, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - final String classId = n.valueOf(xpathClassId); - final String className = code2name.get(classId); - res.add(structuredProperty(n.getText(), classId, className, schemeId, schemeName, info)); - } - return res; - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final Qualifier qualifier, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - res.add(structuredProperty(n.getText(), qualifier, info)); - } - return res; - } - - protected List prepareListStructProps( - final Node node, - final String xpath, - final DataInfo info) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final Node n = (Node) o; - res.add(structuredProperty(n.getText(), n.valueOf("@classid"), n.valueOf("@classname"), n.valueOf("@schemeid"), n.valueOf("@schemename"), info)); - } - return res; - } - - protected OAIProvenance prepareOAIprovenance(final Document doc) { - final Node n = - doc.selectSingleNode("//*[local-name()='provenance']/*[local-name()='originDescription']"); - - if (n == null) { return null; } - - final String identifier = n.valueOf("./*[local-name()='identifier']"); - final String baseURL = n.valueOf("./*[local-name()='baseURL']");; - final String metadataNamespace = n.valueOf("./*[local-name()='metadataNamespace']");; - final boolean altered = n.valueOf("@altered").equalsIgnoreCase("true"); - final String datestamp = n.valueOf("./*[local-name()='datestamp']");; - final String harvestDate = n.valueOf("@harvestDate");; - - return oaiIProvenance(identifier, baseURL, metadataNamespace, altered, datestamp, harvestDate); - } - - protected DataInfo prepareDataInfo(final Document doc) { - final Node n = doc.selectSingleNode("//oaf:datainfo"); - - if (n == null) { return dataInfo(false, null, false, false, MigrationConstants.REPOSITORY_PROVENANCE_ACTIONS, "0.9"); } - - final String paClassId = n.valueOf("./oaf:provenanceaction/@classid"); - final String paClassName = n.valueOf("./oaf:provenanceaction/@classname"); - final String paSchemeId = n.valueOf("./oaf:provenanceaction/@schemeid"); - final String paSchemeName = n.valueOf("./oaf:provenanceaction/@schemename"); - - final boolean deletedbyinference = - Boolean.parseBoolean(n.valueOf("./oaf:deletedbyinference")); - final String inferenceprovenance = n.valueOf("./oaf:inferenceprovenance"); - final Boolean inferred = Boolean.parseBoolean(n.valueOf("./oaf:inferred")); - final String trust = n.valueOf("./oaf:trust"); - - return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, qualifier(paClassId, paClassName, paSchemeId, paSchemeName), trust); - } - - protected Field prepareField(final Node node, final String xpath, final DataInfo info) { - return field(node.valueOf(xpath), info); - } - - protected List> prepareListFields( - final Node node, - final String xpath, - final DataInfo info) { - return listFields(info, prepareListString(node, xpath)); - } - - protected List prepareListString(final Node node, final String xpath) { - final List res = new ArrayList<>(); - for (final Object o : node.selectNodes(xpath)) { - final String s = ((Node) o).getText().trim(); - if (StringUtils.isNotBlank(s)) { - res.add(s); - } - } - return res; - } + protected final Map code2name; + + protected static final Qualifier MAIN_TITLE_QUALIFIER = + qualifier("main title", "main title", "dnet:dataCite_title", "dnet:dataCite_title"); + + protected AbstractMdRecordToOafMapper(final Map code2name) { + this.code2name = code2name; + } + + public List processMdRecord(final String xml) { + try { + final Map nsContext = new HashMap<>(); + nsContext.put("dr", "http://www.driver-repository.eu/namespace/dr"); + nsContext.put("dri", "http://www.driver-repository.eu/namespace/dri"); + nsContext.put("oaf", "http://namespace.openaire.eu/oaf"); + nsContext.put("oai", "http://www.openarchives.org/OAI/2.0/"); + nsContext.put("prov", "http://www.openarchives.org/OAI/2.0/provenance"); + nsContext.put("dc", "http://purl.org/dc/elements/1.1/"); + nsContext.put("datacite", "http://datacite.org/schema/kernel-3"); + DocumentFactory.getInstance().setXPathNamespaceURIs(nsContext); + + final Document doc = + DocumentHelper.parseText( + xml.replaceAll( + "http://datacite.org/schema/kernel-4", + "http://datacite.org/schema/kernel-3")); + + final String type = doc.valueOf("//dr:CobjCategory/@type"); + final KeyValue collectedFrom = + keyValue( + createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), + doc.valueOf("//oaf:collectedFrom/@name")); + final KeyValue hostedBy = + StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id")) + ? collectedFrom + : keyValue( + createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), + doc.valueOf("//oaf:hostedBy/@name")); + + final DataInfo info = prepareDataInfo(doc); + final long lastUpdateTimestamp = new Date().getTime(); + + return createOafs(doc, type, collectedFrom, hostedBy, info, lastUpdateTimestamp); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + protected List createOafs( + final Document doc, + final String type, + final KeyValue collectedFrom, + final KeyValue hostedBy, + final DataInfo info, + final long lastUpdateTimestamp) { + + final List oafs = new ArrayList<>(); + + switch (type.toLowerCase()) { + case "": + case "publication": + final Publication p = new Publication(); + populateResultFields(p, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + p.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); + p.setJournal(prepareJournal(doc, info)); + oafs.add(p); + break; + case "dataset": + final Dataset d = new Dataset(); + populateResultFields(d, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + d.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); + d.setStoragedate(prepareDatasetStorageDate(doc, info)); + d.setDevice(prepareDatasetDevice(doc, info)); + d.setSize(prepareDatasetSize(doc, info)); + d.setVersion(prepareDatasetVersion(doc, info)); + d.setLastmetadataupdate(prepareDatasetLastMetadataUpdate(doc, info)); + d.setMetadataversionnumber(prepareDatasetMetadataVersionNumber(doc, info)); + d.setGeolocation(prepareDatasetGeoLocations(doc, info)); + oafs.add(d); + break; + case "software": + final Software s = new Software(); + populateResultFields(s, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + s.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); + s.setDocumentationUrl(prepareSoftwareDocumentationUrls(doc, info)); + s.setLicense(prepareSoftwareLicenses(doc, info)); + s.setCodeRepositoryUrl(prepareSoftwareCodeRepositoryUrl(doc, info)); + s.setProgrammingLanguage(prepareSoftwareProgrammingLanguage(doc, info)); + oafs.add(s); + break; + case "otherresearchproducts": + default: + final OtherResearchProduct o = new OtherResearchProduct(); + populateResultFields(o, doc, collectedFrom, hostedBy, info, lastUpdateTimestamp); + o.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); + o.setContactperson(prepareOtherResearchProductContactPersons(doc, info)); + o.setContactgroup(prepareOtherResearchProductContactGroups(doc, info)); + o.setTool(prepareOtherResearchProductTools(doc, info)); + oafs.add(o); + break; + } + + if (!oafs.isEmpty()) { + oafs.addAll(addProjectRels(doc, collectedFrom, info, lastUpdateTimestamp)); + oafs.addAll(addOtherResultRels(doc, collectedFrom, info, lastUpdateTimestamp)); + } + + return oafs; + } + + private List addProjectRels( + final Document doc, + final KeyValue collectedFrom, + final DataInfo info, + final long lastUpdateTimestamp) { + + final List res = new ArrayList<>(); + + final String docId = createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false); + + for (final Object o : doc.selectNodes("//oaf:projectid")) { + final String projectId = createOpenaireId(40, ((Node) o).getText(), true); + + final Relation r1 = new Relation(); + r1.setRelType("resultProject"); + r1.setSubRelType("outcome"); + r1.setRelClass("isProducedBy"); + r1.setSource(docId); + r1.setTarget(projectId); + r1.setCollectedfrom(Arrays.asList(collectedFrom)); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + res.add(r1); + + final Relation r2 = new Relation(); + r2.setRelType("resultProject"); + r2.setSubRelType("outcome"); + r2.setRelClass("produces"); + r2.setSource(projectId); + r2.setTarget(docId); + r2.setCollectedfrom(Arrays.asList(collectedFrom)); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + res.add(r2); + } + + return res; + } + + protected abstract List addOtherResultRels( + final Document doc, + final KeyValue collectedFrom, + final DataInfo info, + final long lastUpdateTimestamp); + + private void populateResultFields( + final Result r, + final Document doc, + final KeyValue collectedFrom, + final KeyValue hostedBy, + final DataInfo info, + final long lastUpdateTimestamp) { + r.setDataInfo(info); + r.setLastupdatetimestamp(lastUpdateTimestamp); + r.setId(createOpenaireId(50, doc.valueOf("//dri:objIdentifier"), false)); + r.setOriginalId(Arrays.asList(doc.valueOf("//dri:objIdentifier"))); + r.setCollectedfrom(Arrays.asList(collectedFrom)); + r.setPid( + prepareListStructProps( + doc, + "//oaf:identifier", + "@identifierType", + "dnet:pid_types", + "dnet:pid_types", + info)); + r.setDateofcollection(doc.valueOf("//dr:dateOfCollection")); + r.setDateoftransformation(doc.valueOf("//dr:dateOfTransformation")); + r.setExtraInfo(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setOaiprovenance(prepareOAIprovenance(doc)); + r.setAuthor(prepareAuthors(doc, info)); + r.setLanguage(prepareLanguages(doc)); + r.setCountry(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setSubject(prepareSubjects(doc, info)); + r.setTitle(prepareTitles(doc, info)); + r.setRelevantdate(prepareRelevantDates(doc, info)); + r.setDescription(prepareDescriptions(doc, info)); + r.setDateofacceptance(prepareField(doc, "//oaf:dateAccepted", info)); + r.setPublisher(preparePublisher(doc, info)); + r.setEmbargoenddate(prepareField(doc, "//oaf:embargoenddate", info)); + r.setSource(prepareSources(doc, info)); + r.setFulltext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setFormat(prepareFormats(doc, info)); + r.setContributor(prepareContributors(doc, info)); + r.setResourcetype(prepareResourceType(doc, info)); + r.setCoverage(prepareCoverages(doc, info)); + r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); + } + + protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); + + protected abstract List prepareInstances( + Document doc, DataInfo info, KeyValue collectedfrom, KeyValue hostedby); + + protected abstract List> prepareSources(Document doc, DataInfo info); + + protected abstract List prepareRelevantDates(Document doc, DataInfo info); + + protected abstract List> prepareCoverages(Document doc, DataInfo info); + + protected abstract List> prepareContributors(Document doc, DataInfo info); + + protected abstract List> prepareFormats(Document doc, DataInfo info); + + protected abstract Field preparePublisher(Document doc, DataInfo info); + + protected abstract List> prepareDescriptions(Document doc, DataInfo info); + + protected abstract List prepareTitles(Document doc, DataInfo info); + + protected abstract List prepareSubjects(Document doc, DataInfo info); + + protected abstract Qualifier prepareLanguages(Document doc); + + protected abstract List prepareAuthors(Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductTools( + Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductContactGroups( + Document doc, DataInfo info); + + protected abstract List> prepareOtherResearchProductContactPersons( + Document doc, DataInfo info); + + protected abstract Qualifier prepareSoftwareProgrammingLanguage(Document doc, DataInfo info); + + protected abstract Field prepareSoftwareCodeRepositoryUrl(Document doc, DataInfo info); + + protected abstract List prepareSoftwareLicenses( + Document doc, DataInfo info); + + protected abstract List> prepareSoftwareDocumentationUrls( + Document doc, DataInfo info); + + protected abstract List prepareDatasetGeoLocations(Document doc, DataInfo info); + + protected abstract Field prepareDatasetMetadataVersionNumber( + Document doc, DataInfo info); + + protected abstract Field prepareDatasetLastMetadataUpdate(Document doc, DataInfo info); + + protected abstract Field prepareDatasetVersion(Document doc, DataInfo info); + + protected abstract Field prepareDatasetSize(Document doc, DataInfo info); + + protected abstract Field prepareDatasetDevice(Document doc, DataInfo info); + + protected abstract Field prepareDatasetStorageDate(Document doc, DataInfo info); + + private Journal prepareJournal(final Document doc, final DataInfo info) { + final Node n = doc.selectSingleNode("//oaf:journal"); + if (n != null) { + final String name = n.getText(); + final String issnPrinted = n.valueOf("@issn"); + final String issnOnline = n.valueOf("@eissn"); + final String issnLinking = n.valueOf("@lissn"); + final String ep = n.valueOf("@ep"); + final String iss = n.valueOf("@iss"); + final String sp = n.valueOf("@sp"); + final String vol = n.valueOf("@vol"); + final String edition = n.valueOf("@edition"); + if (StringUtils.isNotBlank(name)) { + return journal( + name, + issnPrinted, + issnOnline, + issnLinking, + ep, + iss, + sp, + vol, + edition, + null, + null, + info); + } + } + return null; + } + + protected Qualifier prepareQualifier( + final Node node, final String xpath, final String schemeId, final String schemeName) { + final String classId = node.valueOf(xpath); + final String className = code2name.get(classId); + return qualifier(classId, className, schemeId, schemeName); + } + + protected List prepareListStructProps( + final Node node, + final String xpath, + final String xpathClassId, + final String schemeId, + final String schemeName, + final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + final String classId = n.valueOf(xpathClassId); + final String className = code2name.get(classId); + res.add( + structuredProperty( + n.getText(), classId, className, schemeId, schemeName, info)); + } + return res; + } + + protected List prepareListStructProps( + final Node node, final String xpath, final Qualifier qualifier, final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + res.add(structuredProperty(n.getText(), qualifier, info)); + } + return res; + } + + protected List prepareListStructProps( + final Node node, final String xpath, final DataInfo info) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final Node n = (Node) o; + res.add( + structuredProperty( + n.getText(), + n.valueOf("@classid"), + n.valueOf("@classname"), + n.valueOf("@schemeid"), + n.valueOf("@schemename"), + info)); + } + return res; + } + + protected OAIProvenance prepareOAIprovenance(final Document doc) { + final Node n = + doc.selectSingleNode( + "//*[local-name()='provenance']/*[local-name()='originDescription']"); + + if (n == null) { + return null; + } + + final String identifier = n.valueOf("./*[local-name()='identifier']"); + final String baseURL = n.valueOf("./*[local-name()='baseURL']"); + ; + final String metadataNamespace = n.valueOf("./*[local-name()='metadataNamespace']"); + ; + final boolean altered = n.valueOf("@altered").equalsIgnoreCase("true"); + final String datestamp = n.valueOf("./*[local-name()='datestamp']"); + ; + final String harvestDate = n.valueOf("@harvestDate"); + ; + + return oaiIProvenance( + identifier, baseURL, metadataNamespace, altered, datestamp, harvestDate); + } + + protected DataInfo prepareDataInfo(final Document doc) { + final Node n = doc.selectSingleNode("//oaf:datainfo"); + + if (n == null) { + return dataInfo( + false, + null, + false, + false, + MigrationConstants.REPOSITORY_PROVENANCE_ACTIONS, + "0.9"); + } + + final String paClassId = n.valueOf("./oaf:provenanceaction/@classid"); + final String paClassName = n.valueOf("./oaf:provenanceaction/@classname"); + final String paSchemeId = n.valueOf("./oaf:provenanceaction/@schemeid"); + final String paSchemeName = n.valueOf("./oaf:provenanceaction/@schemename"); + + final boolean deletedbyinference = + Boolean.parseBoolean(n.valueOf("./oaf:deletedbyinference")); + final String inferenceprovenance = n.valueOf("./oaf:inferenceprovenance"); + final Boolean inferred = Boolean.parseBoolean(n.valueOf("./oaf:inferred")); + final String trust = n.valueOf("./oaf:trust"); + + return dataInfo( + deletedbyinference, + inferenceprovenance, + inferred, + false, + qualifier(paClassId, paClassName, paSchemeId, paSchemeName), + trust); + } + + protected Field prepareField(final Node node, final String xpath, final DataInfo info) { + return field(node.valueOf(xpath), info); + } + + protected List> prepareListFields( + final Node node, final String xpath, final DataInfo info) { + return listFields(info, prepareListString(node, xpath)); + } + + protected List prepareListString(final Node node, final String xpath) { + final List res = new ArrayList<>(); + for (final Object o : node.selectNodes(xpath)) { + final String s = ((Node) o).getText().trim(); + if (StringUtils.isNotBlank(s)) { + res.add(s); + } + } + return res; + } } diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java index eb3a6a8c7..b59056528 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java @@ -10,23 +10,6 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.listKeyValues; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier; import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; -import java.io.Closeable; -import java.io.IOException; -import java.sql.Array; -import java.sql.ResultSet; -import java.sql.SQLException; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Date; -import java.util.List; -import java.util.function.Consumer; -import java.util.function.Function; - -import org.apache.commons.io.IOUtils; -import org.apache.commons.lang3.StringUtils; -import org.apache.commons.logging.Log; -import org.apache.commons.logging.LogFactory; - import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.oa.graph.raw.common.AbstractMigrationApplication; import eu.dnetlib.dhp.oa.graph.raw.common.DbClient; @@ -48,460 +31,531 @@ import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Result; import eu.dnetlib.dhp.schema.oaf.Software; import eu.dnetlib.dhp.schema.oaf.StructuredProperty; +import java.io.Closeable; +import java.io.IOException; +import java.sql.Array; +import java.sql.ResultSet; +import java.sql.SQLException; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Date; +import java.util.List; +import java.util.function.Consumer; +import java.util.function.Function; +import org.apache.commons.io.IOUtils; +import org.apache.commons.lang3.StringUtils; +import org.apache.commons.logging.Log; +import org.apache.commons.logging.LogFactory; public class MigrateDbEntitiesApplication extends AbstractMigrationApplication - implements Closeable { - - private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class); - - private final DbClient dbClient; - - private final long lastUpdateTimestamp; - - public static void main(final String[] args) throws Exception { - final ArgumentApplicationParser parser = - new ArgumentApplicationParser( - IOUtils.toString(MigrateDbEntitiesApplication.class - .getResourceAsStream("/eu/dnetlib/dhp/oa/graph/migrate_db_entities_parameters.json"))); - - parser.parseArgument(args); - - final String dbUrl = parser.get("postgresUrl"); - final String dbUser = parser.get("postgresUser"); - final String dbPassword = parser.get("postgresPassword"); - - final String hdfsPath = parser.get("hdfsPath"); - - final boolean processClaims = - parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims"); - - try (final MigrateDbEntitiesApplication smdbe = - new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser, dbPassword)) { - if (processClaims) { - log.info("Processing claims..."); - smdbe.execute("queryClaims.sql", smdbe::processClaims); - } else { - log.info("Processing datasources..."); - smdbe.execute("queryDatasources.sql", smdbe::processDatasource); - - log.info("Processing projects..."); - smdbe.execute("queryProjects.sql", smdbe::processProject); - - log.info("Processing orgs..."); - smdbe.execute("queryOrganizations.sql", smdbe::processOrganization); - - log.info("Processing relations ds <-> orgs ..."); - smdbe.execute("queryDatasourceOrganization.sql", smdbe::processDatasourceOrganization); - - log.info("Processing projects <-> orgs ..."); - smdbe.execute("queryProjectOrganization.sql", smdbe::processProjectOrganization); - } - log.info("All done."); - } - } - - protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST - super(); - this.dbClient = null; - this.lastUpdateTimestamp = new Date().getTime(); - } - - public MigrateDbEntitiesApplication( - final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword) - throws Exception { - super(hdfsPath); - this.dbClient = new DbClient(dbUrl, dbUser, dbPassword); - this.lastUpdateTimestamp = new Date().getTime(); - } - - public void execute(final String sqlFile, final Function> producer) - throws Exception { - final String sql = - IOUtils.toString(getClass().getResourceAsStream("/eu/dnetlib/dhp/oa/graph/sql/" + sqlFile)); - - final Consumer consumer = rs -> producer.apply(rs).forEach(oaf -> emitOaf(oaf)); - - dbClient.processResults(sql, consumer); - } - - public List processDatasource(final ResultSet rs) { - - try { - - final DataInfo info = prepareDataInfo(rs); - - final Datasource ds = new Datasource(); - - ds.setId(createOpenaireId(10, rs.getString("datasourceid"), true)); - ds.setOriginalId(Arrays.asList(rs.getString("datasourceid"))); - ds.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); - ds.setPid(new ArrayList<>()); - ds.setDateofcollection(asString(rs.getDate("dateofcollection"))); - ds.setDateoftransformation(null); // Value not returned by the SQL query - ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB - ds.setOaiprovenance(null); // Values not present in the DB - ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype"))); - ds.setOpenairecompatibility(prepareQualifierSplitting(rs.getString("openairecompatibility"))); - ds.setOfficialname(field(rs.getString("officialname"), info)); - ds.setEnglishname(field(rs.getString("englishname"), info)); - ds.setWebsiteurl(field(rs.getString("websiteurl"), info)); - ds.setLogourl(field(rs.getString("logourl"), info)); - ds.setContactemail(field(rs.getString("contactemail"), info)); - ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info)); - ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info)); - ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info)); - ds.setDateofvalidation(field(asString(rs.getDate("dateofvalidation")), info)); - ds.setDescription(field(rs.getString("description"), info)); - ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); - ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info)); - ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info)); - ds.setOdpolicies(field(rs.getString("odpolicies"), info)); - ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info)); - ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info)); - ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info)); - ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info)); - ds.setReleaseenddate(field(asString(rs.getDate("releaseenddate")), info)); - ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info)); - ds.setDataprovider(field(rs.getBoolean("dataprovider"), info)); - ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info)); - ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info)); - ds.setDatauploadtype(field(rs.getString("datauploadtype"), info)); - ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info)); - ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info)); - ds.setVersioning(field(rs.getBoolean("versioning"), info)); - ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info)); - ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info)); - ds.setPidsystems(field(rs.getString("pidsystems"), info)); - ds.setCertificates(field(rs.getString("certificates"), info)); - ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array - ds.setJournal(prepareJournal(rs.getString("officialname"), rs.getString("journal"), info)); // Journal - ds.setDataInfo(info); - ds.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(ds); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processProject(final ResultSet rs) { - try { - - final DataInfo info = prepareDataInfo(rs); - - final Project p = new Project(); - - p.setId(createOpenaireId(40, rs.getString("projectid"), true)); - p.setOriginalId(Arrays.asList(rs.getString("projectid"))); - p.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); - p.setPid(new ArrayList<>()); - p.setDateofcollection(asString(rs.getDate("dateofcollection"))); - p.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); - p.setExtraInfo(new ArrayList<>()); // Values not present in the DB - p.setOaiprovenance(null); // Values not present in the DB - p.setWebsiteurl(field(rs.getString("websiteurl"), info)); - p.setCode(field(rs.getString("code"), info)); - p.setAcronym(field(rs.getString("acronym"), info)); - p.setTitle(field(rs.getString("title"), info)); - p.setStartdate(field(asString(rs.getDate("startdate")), info)); - p.setEnddate(field(asString(rs.getDate("enddate")), info)); - p.setCallidentifier(field(rs.getString("callidentifier"), info)); - p.setKeywords(field(rs.getString("keywords"), info)); - p.setDuration(field(Integer.toString(rs.getInt("duration")), info)); - p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info)); - p.setOamandatepublications(field(Boolean.toString(rs.getBoolean("oamandatepublications")), info)); - p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info)); - p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); - p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info)); - p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype"))); - p.setOptional1(field(rs.getString("optional1"), info)); - p.setOptional2(field(rs.getString("optional2"), info)); - p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info)); - p.setContactfullname(field(rs.getString("contactfullname"), info)); - p.setContactfax(field(rs.getString("contactfax"), info)); - p.setContactphone(field(rs.getString("contactphone"), info)); - p.setContactemail(field(rs.getString("contactemail"), info)); - p.setSummary(field(rs.getString("summary"), info)); - p.setCurrency(field(rs.getString("currency"), info)); - p.setTotalcost(new Float(rs.getDouble("totalcost"))); - p.setFundedamount(new Float(rs.getDouble("fundedamount"))); - p.setDataInfo(info); - p.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(p); - - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processOrganization(final ResultSet rs) { - - try { - - final DataInfo info = prepareDataInfo(rs); - - final Organization o = new Organization(); - - o.setId(createOpenaireId(20, rs.getString("organizationid"), true)); - o.setOriginalId(Arrays.asList(rs.getString("organizationid"))); - o.setCollectedfrom(listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname"))); - o.setPid(new ArrayList<>()); - o.setDateofcollection(asString(rs.getDate("dateofcollection"))); - o.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); - o.setExtraInfo(new ArrayList<>()); // Values not present in the DB - o.setOaiprovenance(null); // Values not present in the DB - o.setLegalshortname(field(rs.getString("legalshortname"), info)); - o.setLegalname(field(rs.getString("legalname"), info)); - o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query - o.setWebsiteurl(field(rs.getString("websiteurl"), info)); - o.setLogourl(field(rs.getString("logourl"), info)); - o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info)); - o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info)); - o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info)); - o.setEcresearchorganization(field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info)); - o.setEchighereducation(field(Boolean.toString(rs.getBoolean("echighereducation")), info)); - o.setEcinternationalorganizationeurinterests(field(Boolean.toString(rs.getBoolean("ecinternationalorganizationeurinterests")), info)); - o.setEcinternationalorganization(field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info)); - o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info)); - o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info)); - o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info)); - o.setCountry(prepareQualifierSplitting(rs.getString("country"))); - o.setDataInfo(info); - o.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(o); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processDatasourceOrganization(final ResultSet rs) { - try { - final DataInfo info = prepareDataInfo(rs); - final String orgId = createOpenaireId(20, rs.getString("organization"), true); - final String dsId = createOpenaireId(10, rs.getString("datasource"), true); - final List collectedFrom = - listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname")); - - final Relation r1 = new Relation(); - r1.setRelType("datasourceOrganization"); - r1.setSubRelType("provision"); - r1.setRelClass("isProvidedBy"); - r1.setSource(dsId); - r1.setTarget(orgId); - r1.setCollectedfrom(collectedFrom); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - final Relation r2 = new Relation(); - r2.setRelType("datasourceOrganization"); - r2.setSubRelType("provision"); - r2.setRelClass("provides"); - r2.setSource(orgId); - r2.setTarget(dsId); - r2.setCollectedfrom(collectedFrom); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processProjectOrganization(final ResultSet rs) { - try { - final DataInfo info = prepareDataInfo(rs); - final String orgId = createOpenaireId(20, rs.getString("resporganization"), true); - final String projectId = createOpenaireId(40, rs.getString("project"), true); - final List collectedFrom = - listKeyValues(createOpenaireId(10, rs.getString("collectedfromid"), true), rs.getString("collectedfromname")); - - final Relation r1 = new Relation(); - r1.setRelType("projectOrganization"); - r1.setSubRelType("participation"); - r1.setRelClass("isParticipant"); - r1.setSource(projectId); - r1.setTarget(orgId); - r1.setCollectedfrom(collectedFrom); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - final Relation r2 = new Relation(); - r2.setRelType("projectOrganization"); - r2.setSubRelType("participation"); - r2.setRelClass("hasParticipant"); - r2.setSource(orgId); - r2.setTarget(projectId); - r2.setCollectedfrom(collectedFrom); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - public List processClaims(final ResultSet rs) { - - final DataInfo info = - dataInfo(false, null, false, false, qualifier("user:claim", "user:claim", "dnet:provenanceActions", "dnet:provenanceActions"), "0.9"); - - final List collectedFrom = - listKeyValues(createOpenaireId(10, "infrastruct_::openaire", true), "OpenAIRE"); - - try { - - if (rs.getString("source_type").equals("context")) { - final Result r; - - if (rs.getString("target_type").equals("dataset")) { - r = new Dataset(); - r.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); - } else if (rs.getString("target_type").equals("software")) { - r = new Software(); - r.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); - } else if (rs.getString("target_type").equals("other")) { - r = new OtherResearchProduct(); - r.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); - } else { - r = new Publication(); - r.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); - } - r.setId(createOpenaireId(50, rs.getString("target_id"), false)); - r.setLastupdatetimestamp(lastUpdateTimestamp); - r.setContext(prepareContext(rs.getString("source_id"), info)); - r.setDataInfo(info); - r.setCollectedfrom(collectedFrom); - - return Arrays.asList(r); - } else { - final String sourceId = - createOpenaireId(rs.getString("source_type"), rs.getString("source_id"), false); - final String targetId = - createOpenaireId(rs.getString("target_type"), rs.getString("target_id"), false); - - final Relation r1 = new Relation(); - final Relation r2 = new Relation(); - - if (rs.getString("source_type").equals("project")) { - r1.setCollectedfrom(collectedFrom); - r1.setRelType("resultProject"); - r1.setSubRelType("outcome"); - r1.setRelClass("produces"); - - r2.setCollectedfrom(collectedFrom); - r2.setRelType("resultProject"); - r2.setSubRelType("outcome"); - r2.setRelClass("isProducedBy"); - } else { - r1.setCollectedfrom(collectedFrom); - r1.setRelType("resultResult"); - r1.setSubRelType("relationship"); - r1.setRelClass("isRelatedTo"); - - r2.setCollectedfrom(collectedFrom); - r2.setRelType("resultResult"); - r2.setSubRelType("relationship"); - r2.setRelClass("isRelatedTo"); - } - - r1.setSource(sourceId); - r1.setTarget(targetId); - r1.setDataInfo(info); - r1.setLastupdatetimestamp(lastUpdateTimestamp); - - r2.setSource(targetId); - r2.setTarget(sourceId); - r2.setDataInfo(info); - r2.setLastupdatetimestamp(lastUpdateTimestamp); - - return Arrays.asList(r1, r2); - } - - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - - private List prepareContext(final String id, final DataInfo dataInfo) { - final Context context = new Context(); - context.setId(id); - context.setDataInfo(Arrays.asList(dataInfo)); - return Arrays.asList(context); - } - - private DataInfo prepareDataInfo(final ResultSet rs) throws SQLException { - final Boolean deletedbyinference = rs.getBoolean("deletedbyinference"); - final String inferenceprovenance = rs.getString("inferenceprovenance"); - final Boolean inferred = rs.getBoolean("inferred"); - final String trust = rs.getString("trust"); - return dataInfo(deletedbyinference, inferenceprovenance, inferred, false, MigrationConstants.ENTITYREGISTRY_PROVENANCE_ACTION, trust); - } - - private Qualifier prepareQualifierSplitting(final String s) { - if (StringUtils.isBlank(s)) { return null; } - final String[] arr = s.split("@@@"); - return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null; - } - - private List> prepareListFields(final Array array, final DataInfo info) { - try { - return array != null - ? listFields(info, (String[]) array.getArray()) - : new ArrayList<>(); - } catch (final SQLException e) { - throw new RuntimeException("Invalid SQL array", e); - } - } - - private StructuredProperty prepareStructProp(final String s, final DataInfo dataInfo) { - if (StringUtils.isBlank(s)) { return null; } - final String[] parts = s.split("###"); - if (parts.length == 2) { - final String value = parts[0]; - final String[] arr = parts[1].split("@@@"); - if (arr.length == 4) { return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); } - } - return null; - } - - private List prepareListOfStructProps( - final Array array, - final DataInfo dataInfo) throws SQLException { - final List res = new ArrayList<>(); - if (array != null) { - for (final String s : (String[]) array.getArray()) { - final StructuredProperty sp = prepareStructProp(s, dataInfo); - if (sp != null) { - res.add(sp); - } - } - } - - return res; - } - - private Journal prepareJournal(final String name, final String sj, final DataInfo info) { - if (StringUtils.isNotBlank(sj)) { - final String[] arr = sj.split("@@@"); - if (arr.length == 3) { - final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null; - final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null;; - final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null;; - if (issn != null || eissn != null || lissn != null) { - return journal(name, issn, eissn, eissn, null, null, null, null, null, null, null, info); - } - } - } - return null; - } - - @Override - public void close() throws IOException { - super.close(); - dbClient.close(); - } + implements Closeable { + + private static final Log log = LogFactory.getLog(MigrateDbEntitiesApplication.class); + + private final DbClient dbClient; + + private final long lastUpdateTimestamp; + + public static void main(final String[] args) throws Exception { + final ArgumentApplicationParser parser = + new ArgumentApplicationParser( + IOUtils.toString( + MigrateDbEntitiesApplication.class.getResourceAsStream( + "/eu/dnetlib/dhp/oa/graph/migrate_db_entities_parameters.json"))); + + parser.parseArgument(args); + + final String dbUrl = parser.get("postgresUrl"); + final String dbUser = parser.get("postgresUser"); + final String dbPassword = parser.get("postgresPassword"); + + final String hdfsPath = parser.get("hdfsPath"); + + final boolean processClaims = + parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims"); + + try (final MigrateDbEntitiesApplication smdbe = + new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser, dbPassword)) { + if (processClaims) { + log.info("Processing claims..."); + smdbe.execute("queryClaims.sql", smdbe::processClaims); + } else { + log.info("Processing datasources..."); + smdbe.execute("queryDatasources.sql", smdbe::processDatasource); + + log.info("Processing projects..."); + smdbe.execute("queryProjects.sql", smdbe::processProject); + + log.info("Processing orgs..."); + smdbe.execute("queryOrganizations.sql", smdbe::processOrganization); + + log.info("Processing relations ds <-> orgs ..."); + smdbe.execute( + "queryDatasourceOrganization.sql", smdbe::processDatasourceOrganization); + + log.info("Processing projects <-> orgs ..."); + smdbe.execute("queryProjectOrganization.sql", smdbe::processProjectOrganization); + } + log.info("All done."); + } + } + + protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST + super(); + this.dbClient = null; + this.lastUpdateTimestamp = new Date().getTime(); + } + + public MigrateDbEntitiesApplication( + final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword) + throws Exception { + super(hdfsPath); + this.dbClient = new DbClient(dbUrl, dbUser, dbPassword); + this.lastUpdateTimestamp = new Date().getTime(); + } + + public void execute(final String sqlFile, final Function> producer) + throws Exception { + final String sql = + IOUtils.toString( + getClass().getResourceAsStream("/eu/dnetlib/dhp/oa/graph/sql/" + sqlFile)); + + final Consumer consumer = rs -> producer.apply(rs).forEach(oaf -> emitOaf(oaf)); + + dbClient.processResults(sql, consumer); + } + + public List processDatasource(final ResultSet rs) { + + try { + + final DataInfo info = prepareDataInfo(rs); + + final Datasource ds = new Datasource(); + + ds.setId(createOpenaireId(10, rs.getString("datasourceid"), true)); + ds.setOriginalId(Arrays.asList(rs.getString("datasourceid"))); + ds.setCollectedfrom( + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname"))); + ds.setPid(new ArrayList<>()); + ds.setDateofcollection(asString(rs.getDate("dateofcollection"))); + ds.setDateoftransformation(null); // Value not returned by the SQL query + ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB + ds.setOaiprovenance(null); // Values not present in the DB + ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype"))); + ds.setOpenairecompatibility( + prepareQualifierSplitting(rs.getString("openairecompatibility"))); + ds.setOfficialname(field(rs.getString("officialname"), info)); + ds.setEnglishname(field(rs.getString("englishname"), info)); + ds.setWebsiteurl(field(rs.getString("websiteurl"), info)); + ds.setLogourl(field(rs.getString("logourl"), info)); + ds.setContactemail(field(rs.getString("contactemail"), info)); + ds.setNamespaceprefix(field(rs.getString("namespaceprefix"), info)); + ds.setLatitude(field(Double.toString(rs.getDouble("latitude")), info)); + ds.setLongitude(field(Double.toString(rs.getDouble("longitude")), info)); + ds.setDateofvalidation(field(asString(rs.getDate("dateofvalidation")), info)); + ds.setDescription(field(rs.getString("description"), info)); + ds.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); + ds.setOdnumberofitems(field(Double.toString(rs.getInt("odnumberofitems")), info)); + ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info)); + ds.setOdpolicies(field(rs.getString("odpolicies"), info)); + ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info)); + ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info)); + ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info)); + ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info)); + ds.setReleaseenddate(field(asString(rs.getDate("releaseenddate")), info)); + ds.setMissionstatementurl(field(rs.getString("missionstatementurl"), info)); + ds.setDataprovider(field(rs.getBoolean("dataprovider"), info)); + ds.setServiceprovider(field(rs.getBoolean("serviceprovider"), info)); + ds.setDatabaseaccesstype(field(rs.getString("databaseaccesstype"), info)); + ds.setDatauploadtype(field(rs.getString("datauploadtype"), info)); + ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info)); + ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info)); + ds.setVersioning(field(rs.getBoolean("versioning"), info)); + ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info)); + ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info)); + ds.setPidsystems(field(rs.getString("pidsystems"), info)); + ds.setCertificates(field(rs.getString("certificates"), info)); + ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array + ds.setJournal( + prepareJournal( + rs.getString("officialname"), + rs.getString("journal"), + info)); // Journal + ds.setDataInfo(info); + ds.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(ds); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processProject(final ResultSet rs) { + try { + + final DataInfo info = prepareDataInfo(rs); + + final Project p = new Project(); + + p.setId(createOpenaireId(40, rs.getString("projectid"), true)); + p.setOriginalId(Arrays.asList(rs.getString("projectid"))); + p.setCollectedfrom( + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname"))); + p.setPid(new ArrayList<>()); + p.setDateofcollection(asString(rs.getDate("dateofcollection"))); + p.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); + p.setExtraInfo(new ArrayList<>()); // Values not present in the DB + p.setOaiprovenance(null); // Values not present in the DB + p.setWebsiteurl(field(rs.getString("websiteurl"), info)); + p.setCode(field(rs.getString("code"), info)); + p.setAcronym(field(rs.getString("acronym"), info)); + p.setTitle(field(rs.getString("title"), info)); + p.setStartdate(field(asString(rs.getDate("startdate")), info)); + p.setEnddate(field(asString(rs.getDate("enddate")), info)); + p.setCallidentifier(field(rs.getString("callidentifier"), info)); + p.setKeywords(field(rs.getString("keywords"), info)); + p.setDuration(field(Integer.toString(rs.getInt("duration")), info)); + p.setEcsc39(field(Boolean.toString(rs.getBoolean("ecsc39")), info)); + p.setOamandatepublications( + field(Boolean.toString(rs.getBoolean("oamandatepublications")), info)); + p.setEcarticle29_3(field(Boolean.toString(rs.getBoolean("ecarticle29_3")), info)); + p.setSubjects(prepareListOfStructProps(rs.getArray("subjects"), info)); + p.setFundingtree(prepareListFields(rs.getArray("fundingtree"), info)); + p.setContracttype(prepareQualifierSplitting(rs.getString("contracttype"))); + p.setOptional1(field(rs.getString("optional1"), info)); + p.setOptional2(field(rs.getString("optional2"), info)); + p.setJsonextrainfo(field(rs.getString("jsonextrainfo"), info)); + p.setContactfullname(field(rs.getString("contactfullname"), info)); + p.setContactfax(field(rs.getString("contactfax"), info)); + p.setContactphone(field(rs.getString("contactphone"), info)); + p.setContactemail(field(rs.getString("contactemail"), info)); + p.setSummary(field(rs.getString("summary"), info)); + p.setCurrency(field(rs.getString("currency"), info)); + p.setTotalcost(new Float(rs.getDouble("totalcost"))); + p.setFundedamount(new Float(rs.getDouble("fundedamount"))); + p.setDataInfo(info); + p.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(p); + + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processOrganization(final ResultSet rs) { + + try { + + final DataInfo info = prepareDataInfo(rs); + + final Organization o = new Organization(); + + o.setId(createOpenaireId(20, rs.getString("organizationid"), true)); + o.setOriginalId(Arrays.asList(rs.getString("organizationid"))); + o.setCollectedfrom( + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname"))); + o.setPid(new ArrayList<>()); + o.setDateofcollection(asString(rs.getDate("dateofcollection"))); + o.setDateoftransformation(asString(rs.getDate("dateoftransformation"))); + o.setExtraInfo(new ArrayList<>()); // Values not present in the DB + o.setOaiprovenance(null); // Values not present in the DB + o.setLegalshortname(field(rs.getString("legalshortname"), info)); + o.setLegalname(field(rs.getString("legalname"), info)); + o.setAlternativeNames(new ArrayList<>()); // Values not returned by the SQL query + o.setWebsiteurl(field(rs.getString("websiteurl"), info)); + o.setLogourl(field(rs.getString("logourl"), info)); + o.setEclegalbody(field(Boolean.toString(rs.getBoolean("eclegalbody")), info)); + o.setEclegalperson(field(Boolean.toString(rs.getBoolean("eclegalperson")), info)); + o.setEcnonprofit(field(Boolean.toString(rs.getBoolean("ecnonprofit")), info)); + o.setEcresearchorganization( + field(Boolean.toString(rs.getBoolean("ecresearchorganization")), info)); + o.setEchighereducation( + field(Boolean.toString(rs.getBoolean("echighereducation")), info)); + o.setEcinternationalorganizationeurinterests( + field( + Boolean.toString( + rs.getBoolean("ecinternationalorganizationeurinterests")), + info)); + o.setEcinternationalorganization( + field(Boolean.toString(rs.getBoolean("ecinternationalorganization")), info)); + o.setEcenterprise(field(Boolean.toString(rs.getBoolean("ecenterprise")), info)); + o.setEcsmevalidated(field(Boolean.toString(rs.getBoolean("ecsmevalidated")), info)); + o.setEcnutscode(field(Boolean.toString(rs.getBoolean("ecnutscode")), info)); + o.setCountry(prepareQualifierSplitting(rs.getString("country"))); + o.setDataInfo(info); + o.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(o); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processDatasourceOrganization(final ResultSet rs) { + try { + final DataInfo info = prepareDataInfo(rs); + final String orgId = createOpenaireId(20, rs.getString("organization"), true); + final String dsId = createOpenaireId(10, rs.getString("datasource"), true); + final List collectedFrom = + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname")); + + final Relation r1 = new Relation(); + r1.setRelType("datasourceOrganization"); + r1.setSubRelType("provision"); + r1.setRelClass("isProvidedBy"); + r1.setSource(dsId); + r1.setTarget(orgId); + r1.setCollectedfrom(collectedFrom); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + final Relation r2 = new Relation(); + r2.setRelType("datasourceOrganization"); + r2.setSubRelType("provision"); + r2.setRelClass("provides"); + r2.setSource(orgId); + r2.setTarget(dsId); + r2.setCollectedfrom(collectedFrom); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processProjectOrganization(final ResultSet rs) { + try { + final DataInfo info = prepareDataInfo(rs); + final String orgId = createOpenaireId(20, rs.getString("resporganization"), true); + final String projectId = createOpenaireId(40, rs.getString("project"), true); + final List collectedFrom = + listKeyValues( + createOpenaireId(10, rs.getString("collectedfromid"), true), + rs.getString("collectedfromname")); + + final Relation r1 = new Relation(); + r1.setRelType("projectOrganization"); + r1.setSubRelType("participation"); + r1.setRelClass("isParticipant"); + r1.setSource(projectId); + r1.setTarget(orgId); + r1.setCollectedfrom(collectedFrom); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + final Relation r2 = new Relation(); + r2.setRelType("projectOrganization"); + r2.setSubRelType("participation"); + r2.setRelClass("hasParticipant"); + r2.setSource(orgId); + r2.setTarget(projectId); + r2.setCollectedfrom(collectedFrom); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + public List processClaims(final ResultSet rs) { + + final DataInfo info = + dataInfo( + false, + null, + false, + false, + qualifier( + "user:claim", + "user:claim", + "dnet:provenanceActions", + "dnet:provenanceActions"), + "0.9"); + + final List collectedFrom = + listKeyValues(createOpenaireId(10, "infrastruct_::openaire", true), "OpenAIRE"); + + try { + + if (rs.getString("source_type").equals("context")) { + final Result r; + + if (rs.getString("target_type").equals("dataset")) { + r = new Dataset(); + r.setResulttype(MigrationConstants.DATASET_RESULTTYPE_QUALIFIER); + } else if (rs.getString("target_type").equals("software")) { + r = new Software(); + r.setResulttype(MigrationConstants.SOFTWARE_RESULTTYPE_QUALIFIER); + } else if (rs.getString("target_type").equals("other")) { + r = new OtherResearchProduct(); + r.setResulttype(MigrationConstants.OTHER_RESULTTYPE_QUALIFIER); + } else { + r = new Publication(); + r.setResulttype(MigrationConstants.PUBLICATION_RESULTTYPE_QUALIFIER); + } + r.setId(createOpenaireId(50, rs.getString("target_id"), false)); + r.setLastupdatetimestamp(lastUpdateTimestamp); + r.setContext(prepareContext(rs.getString("source_id"), info)); + r.setDataInfo(info); + r.setCollectedfrom(collectedFrom); + + return Arrays.asList(r); + } else { + final String sourceId = + createOpenaireId( + rs.getString("source_type"), rs.getString("source_id"), false); + final String targetId = + createOpenaireId( + rs.getString("target_type"), rs.getString("target_id"), false); + + final Relation r1 = new Relation(); + final Relation r2 = new Relation(); + + if (rs.getString("source_type").equals("project")) { + r1.setCollectedfrom(collectedFrom); + r1.setRelType("resultProject"); + r1.setSubRelType("outcome"); + r1.setRelClass("produces"); + + r2.setCollectedfrom(collectedFrom); + r2.setRelType("resultProject"); + r2.setSubRelType("outcome"); + r2.setRelClass("isProducedBy"); + } else { + r1.setCollectedfrom(collectedFrom); + r1.setRelType("resultResult"); + r1.setSubRelType("relationship"); + r1.setRelClass("isRelatedTo"); + + r2.setCollectedfrom(collectedFrom); + r2.setRelType("resultResult"); + r2.setSubRelType("relationship"); + r2.setRelClass("isRelatedTo"); + } + + r1.setSource(sourceId); + r1.setTarget(targetId); + r1.setDataInfo(info); + r1.setLastupdatetimestamp(lastUpdateTimestamp); + + r2.setSource(targetId); + r2.setTarget(sourceId); + r2.setDataInfo(info); + r2.setLastupdatetimestamp(lastUpdateTimestamp); + + return Arrays.asList(r1, r2); + } + + } catch (final Exception e) { + throw new RuntimeException(e); + } + } + + private List prepareContext(final String id, final DataInfo dataInfo) { + final Context context = new Context(); + context.setId(id); + context.setDataInfo(Arrays.asList(dataInfo)); + return Arrays.asList(context); + } + + private DataInfo prepareDataInfo(final ResultSet rs) throws SQLException { + final Boolean deletedbyinference = rs.getBoolean("deletedbyinference"); + final String inferenceprovenance = rs.getString("inferenceprovenance"); + final Boolean inferred = rs.getBoolean("inferred"); + final String trust = rs.getString("trust"); + return dataInfo( + deletedbyinference, + inferenceprovenance, + inferred, + false, + MigrationConstants.ENTITYREGISTRY_PROVENANCE_ACTION, + trust); + } + + private Qualifier prepareQualifierSplitting(final String s) { + if (StringUtils.isBlank(s)) { + return null; + } + final String[] arr = s.split("@@@"); + return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null; + } + + private List> prepareListFields(final Array array, final DataInfo info) { + try { + return array != null + ? listFields(info, (String[]) array.getArray()) + : new ArrayList<>(); + } catch (final SQLException e) { + throw new RuntimeException("Invalid SQL array", e); + } + } + + private StructuredProperty prepareStructProp(final String s, final DataInfo dataInfo) { + if (StringUtils.isBlank(s)) { + return null; + } + final String[] parts = s.split("###"); + if (parts.length == 2) { + final String value = parts[0]; + final String[] arr = parts[1].split("@@@"); + if (arr.length == 4) { + return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo); + } + } + return null; + } + + private List prepareListOfStructProps( + final Array array, final DataInfo dataInfo) throws SQLException { + final List res = new ArrayList<>(); + if (array != null) { + for (final String s : (String[]) array.getArray()) { + final StructuredProperty sp = prepareStructProp(s, dataInfo); + if (sp != null) { + res.add(sp); + } + } + } + + return res; + } + + private Journal prepareJournal(final String name, final String sj, final DataInfo info) { + if (StringUtils.isNotBlank(sj)) { + final String[] arr = sj.split("@@@"); + if (arr.length == 3) { + final String issn = StringUtils.isNotBlank(arr[0]) ? arr[0] : null; + final String eissn = StringUtils.isNotBlank(arr[1]) ? arr[1] : null; + ; + final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2] : null; + ; + if (issn != null || eissn != null || lissn != null) { + return journal( + name, issn, eissn, eissn, null, null, null, null, null, null, null, + info); + } + } + } + return null; + } + + @Override + public void close() throws IOException { + super.close(); + dbClient.close(); + } } diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java index f6fab499b..6ac5dd487 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java @@ -1,8 +1,19 @@ package eu.dnetlib.dhp.oa.graph.raw; -import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.*; +import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.createOpenaireId; +import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.field; +import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty; -import eu.dnetlib.dhp.schema.oaf.*; +import eu.dnetlib.dhp.schema.oaf.Author; +import eu.dnetlib.dhp.schema.oaf.DataInfo; +import eu.dnetlib.dhp.schema.oaf.Field; +import eu.dnetlib.dhp.schema.oaf.GeoLocation; +import eu.dnetlib.dhp.schema.oaf.Instance; +import eu.dnetlib.dhp.schema.oaf.KeyValue; +import eu.dnetlib.dhp.schema.oaf.Oaf; +import eu.dnetlib.dhp.schema.oaf.Qualifier; +import eu.dnetlib.dhp.schema.oaf.Relation; +import eu.dnetlib.dhp.schema.oaf.StructuredProperty; import java.util.ArrayList; import java.util.Arrays; import java.util.List; @@ -62,33 +73,44 @@ public class OdfToOafMapper extends AbstractMdRecordToOafMapper { final DataInfo info, final KeyValue collectedfrom, final KeyValue hostedby) { - final List res = new ArrayList<>(); + + final Instance instance = new Instance(); + instance.setUrl(new ArrayList<>()); + instance.setInstancetype( + prepareQualifier( + doc, + "//dr:CobjCategory", + "dnet:publication_resource", + "dnet:publication_resource")); + instance.setCollectedfrom(collectedfrom); + instance.setHostedby(hostedby); + instance.setDateofacceptance(field(doc.valueOf("//oaf:dateAccepted"), info)); + instance.setDistributionlocation(doc.valueOf("//oaf:distributionlocation")); + instance.setAccessright( + prepareQualifier( + doc, "//oaf:accessrights", "dnet:access_modes", "dnet:access_modes")); + instance.setLicense(field(doc.valueOf("//oaf:license"), info)); + instance.setRefereed(field(doc.valueOf("//oaf:refereed"), info)); + instance.setProcessingchargeamount( + field(doc.valueOf("//oaf:processingchargeamount"), info)); + instance.setProcessingchargecurrency( + field(doc.valueOf("//oaf:processingchargeamount/@currency"), info)); + for (final Object o : doc.selectNodes("//datacite:alternateIdentifier[@alternateIdentifierType='URL']")) { - final Instance instance = new Instance(); - instance.setUrl(Arrays.asList(((Node) o).getText().trim())); - instance.setInstancetype( - prepareQualifier( - doc, - "//dr:CobjCategory", - "dnet:publication_resource", - "dnet:publication_resource")); - instance.setCollectedfrom(collectedfrom); - instance.setHostedby(hostedby); - instance.setDateofacceptance(field(doc.valueOf("//oaf:dateAccepted"), info)); - instance.setDistributionlocation(doc.valueOf("//oaf:distributionlocation")); - instance.setAccessright( - prepareQualifier( - doc, "//oaf:accessrights", "dnet:access_modes", "dnet:access_modes")); - instance.setLicense(field(doc.valueOf("//oaf:license"), info)); - instance.setRefereed(field(doc.valueOf("//oaf:refereed"), info)); - instance.setProcessingchargeamount( - field(doc.valueOf("//oaf:processingchargeamount"), info)); - instance.setProcessingchargecurrency( - field(doc.valueOf("//oaf:processingchargeamount/@currency"), info)); - res.add(instance); + instance.getUrl().add(((Node) o).getText().trim()); } - return res; + for (final Object o : doc.selectNodes("//datacite:identifier[@identifierType='URL']")) { + instance.getUrl().add(((Node) o).getText().trim()); + } + for (final Object o : + doc.selectNodes("//datacite:alternateIdentifier[@alternateIdentifierType='DOI']")) { + instance.getUrl().add("http://dx.doi.org/" + ((Node) o).getText().trim()); + } + for (final Object o : doc.selectNodes("//datacite:identifier[@identifierType='DOI']")) { + instance.getUrl().add("http://dx.doi.org/" + ((Node) o).getText().trim()); + } + return Arrays.asList(instance); } @Override diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java index f9ff105b0..2f31b1e03 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/MigrationConstants.java @@ -6,17 +6,28 @@ import eu.dnetlib.dhp.schema.oaf.Qualifier; public class MigrationConstants { - public static final Qualifier PUBLICATION_RESULTTYPE_QUALIFIER = - qualifier("publication", "publication", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier DATASET_RESULTTYPE_QUALIFIER = - qualifier("dataset", "dataset", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier SOFTWARE_RESULTTYPE_QUALIFIER = - qualifier("software", "software", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier OTHER_RESULTTYPE_QUALIFIER = - qualifier("other", "other", "dnet:result_typologies", "dnet:result_typologies"); - public static final Qualifier REPOSITORY_PROVENANCE_ACTIONS = - qualifier("sysimport:crosswalk:repository", "sysimport:crosswalk:repository", "dnet:provenanceActions", "dnet:provenanceActions"); - public static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = - qualifier("sysimport:crosswalk:entityregistry", "sysimport:crosswalk:entityregistry", "dnet:provenanceActions", "dnet:provenanceActions"); - + public static final Qualifier PUBLICATION_RESULTTYPE_QUALIFIER = + qualifier( + "publication", + "publication", + "dnet:result_typologies", + "dnet:result_typologies"); + public static final Qualifier DATASET_RESULTTYPE_QUALIFIER = + qualifier("dataset", "dataset", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier SOFTWARE_RESULTTYPE_QUALIFIER = + qualifier("software", "software", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier OTHER_RESULTTYPE_QUALIFIER = + qualifier("other", "other", "dnet:result_typologies", "dnet:result_typologies"); + public static final Qualifier REPOSITORY_PROVENANCE_ACTIONS = + qualifier( + "sysimport:crosswalk:repository", + "sysimport:crosswalk:repository", + "dnet:provenanceActions", + "dnet:provenanceActions"); + public static final Qualifier ENTITYREGISTRY_PROVENANCE_ACTION = + qualifier( + "sysimport:crosswalk:entityregistry", + "sysimport:crosswalk:entityregistry", + "dnet:provenanceActions", + "dnet:provenanceActions"); } diff --git a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java index b09c5d638..a21b3d9fd 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java +++ b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java @@ -54,6 +54,7 @@ public class MappersTest { assertTrue(p.getSubject().size() > 0); assertTrue(StringUtils.isNotBlank(p.getJournal().getIssnOnline())); assertTrue(StringUtils.isNotBlank(p.getJournal().getName())); + assertTrue(p.getInstance().size() > 0); assertValidId(r1.getSource()); assertValidId(r1.getTarget()); @@ -96,6 +97,7 @@ public class MappersTest { assertTrue(StringUtils.isNotBlank(d.getTitle().get(0).getValue())); assertTrue(d.getAuthor().size() > 0); assertTrue(d.getSubject().size() > 0); + assertTrue(d.getInstance().size() > 0); assertValidId(r1.getSource()); assertValidId(r1.getTarget()); @@ -129,6 +131,7 @@ public class MappersTest { assertTrue(StringUtils.isNotBlank(s.getTitle().get(0).getValue())); assertTrue(s.getAuthor().size() > 0); assertTrue(s.getSubject().size() > 0); + assertTrue(s.getInstance().size() > 0); } private void assertValidId(final String id) { From 072eae38035b79d600df0ff373d45a2faaa01e2f Mon Sep 17 00:00:00 2001 From: "michele.artini" Date: Thu, 23 Apr 2020 16:42:49 +0200 Subject: [PATCH 10/17] fixed a problem with missing contexts --- .../graph/raw/AbstractMdRecordToOafMapper.java | 17 ++++++++++++++++- .../dnetlib/dhp/oa/graph/raw/MappersTest.java | 2 ++ 2 files changed, 18 insertions(+), 1 deletion(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java index 3519cd88d..73cb1375f 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java @@ -12,6 +12,7 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProper import eu.dnetlib.dhp.oa.graph.raw.common.MigrationConstants; import eu.dnetlib.dhp.schema.oaf.Author; +import eu.dnetlib.dhp.schema.oaf.Context; import eu.dnetlib.dhp.schema.oaf.DataInfo; import eu.dnetlib.dhp.schema.oaf.Dataset; import eu.dnetlib.dhp.schema.oaf.Field; @@ -237,11 +238,25 @@ public abstract class AbstractMdRecordToOafMapper { r.setContributor(prepareContributors(doc, info)); r.setResourcetype(prepareResourceType(doc, info)); r.setCoverage(prepareCoverages(doc, info)); - r.setContext(new ArrayList<>()); // NOT PRESENT IN MDSTORES + r.setContext(prepareContexts(doc, info)); r.setExternalReference(new ArrayList<>()); // NOT PRESENT IN MDSTORES r.setInstance(prepareInstances(doc, info, collectedFrom, hostedBy)); } + private List prepareContexts(final Document doc, final DataInfo info) { + final List list = new ArrayList<>(); + for (final Object o : doc.selectNodes("//oaf:concept")) { + final String cid = ((Node) o).valueOf("@id"); + if (StringUtils.isNotBlank(cid)) { + final Context c = new Context(); + c.setId(cid); + c.setDataInfo(Arrays.asList(info)); + list.add(c); + } + } + return list; + } + protected abstract Qualifier prepareResourceType(Document doc, DataInfo info); protected abstract List prepareInstances( diff --git a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java index a21b3d9fd..5b445a1ef 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java +++ b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java @@ -98,6 +98,8 @@ public class MappersTest { assertTrue(d.getAuthor().size() > 0); assertTrue(d.getSubject().size() > 0); assertTrue(d.getInstance().size() > 0); + assertTrue(d.getContext().size() > 0); + assertTrue(d.getContext().get(0).getId().length() > 0); assertValidId(r1.getSource()); assertValidId(r1.getTarget()); From 8d258c85ff46fdbc41a8eea311e9252ae2139313 Mon Sep 17 00:00:00 2001 From: miconis Date: Thu, 23 Apr 2020 18:16:20 +0200 Subject: [PATCH 11/17] spark dedup test fixed, sample for dataset and orp added, test implemented --- .../dnetlib/dhp/oa/dedup/SparkDedupTest.java | 86 +++- .../dnetlib/dhp/dedup/conf/ds.curr.conf.json | 11 +- .../dnetlib/dhp/dedup/conf/orp.curr.conf.json | 11 +- .../dnetlib/dhp/dedup/conf/sw.curr.conf.json | 4 +- .../eu/dnetlib/dhp/dedup/entities/dataset | 292 ++++++++++++ .../dhp/dedup/entities/otherresearchproduct | 428 ++++++++++++++++++ .../dhp/dedup/profiles/mock_orchestrator.xml | 2 + 7 files changed, 822 insertions(+), 12 deletions(-) diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java b/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java index 5979fc9b7..6a505ebb9 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java +++ b/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java @@ -57,7 +57,6 @@ public class SparkDedupTest implements Serializable { .toURI()) .toFile() .getAbsolutePath(); - testOutputBasePath = createTempDirectory(SparkDedupTest.class.getSimpleName() + "-") .toAbsolutePath() @@ -110,6 +109,20 @@ public class SparkDedupTest implements Serializable { IOUtils.toString( SparkDedupTest.class.getResourceAsStream( "/eu/dnetlib/dhp/dedup/conf/sw.curr.conf.json"))); + + lenient() + .when(isLookUpService.getResourceProfileByQuery(Mockito.contains("dataset"))) + .thenReturn( + IOUtils.toString( + SparkDedupTest.class.getResourceAsStream( + "/eu/dnetlib/dhp/dedup/conf/ds.curr.conf.json"))); + + lenient() + .when(isLookUpService.getResourceProfileByQuery(Mockito.contains("otherresearchproduct"))) + .thenReturn( + IOUtils.toString( + SparkDedupTest.class.getResourceAsStream( + "/eu/dnetlib/dhp/dedup/conf/orp.curr.conf.json"))); } @Test @@ -144,9 +157,21 @@ public class SparkDedupTest implements Serializable { .load(testOutputBasePath + "/" + testActionSetId + "/software_simrel") .count(); + long ds_simrel = + spark.read() + .load(testOutputBasePath + "/" + testActionSetId + "/dataset_simrel") + .count(); + + long orp_simrel = + spark.read() + .load(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_simrel") + .count(); + assertEquals(3432, orgs_simrel); assertEquals(7260, pubs_simrel); assertEquals(344, sw_simrel); + assertEquals(458, ds_simrel); + assertEquals(6740, orp_simrel); } @Test @@ -181,9 +206,21 @@ public class SparkDedupTest implements Serializable { .load(testOutputBasePath + "/" + testActionSetId + "/software_mergerel") .count(); + long ds_mergerel = + spark.read() + .load(testOutputBasePath + "/" + testActionSetId + "/dataset_mergerel") + .count(); + + long orp_mergerel = + spark.read() + .load(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_mergerel") + .count(); + assertEquals(1276, orgs_mergerel); assertEquals(1460, pubs_mergerel); assertEquals(288, sw_mergerel); + assertEquals(472, ds_mergerel); + assertEquals(714, orp_mergerel); } @Test @@ -217,15 +254,22 @@ public class SparkDedupTest implements Serializable { testOutputBasePath + "/" + testActionSetId - + "/publication_deduprecord") - .count(); + + "/publication_deduprecord").count(); long sw_deduprecord = jsc.textFile(testOutputBasePath + "/" + testActionSetId + "/software_deduprecord") .count(); + long ds_deduprecord = + jsc.textFile(testOutputBasePath + "/" + testActionSetId + "/dataset_deduprecord") + .count(); + long orp_deduprecord = + jsc.textFile(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_deduprecord") + .count(); assertEquals(82, orgs_deduprecord); assertEquals(66, pubs_deduprecord); assertEquals(51, sw_deduprecord); + assertEquals(96, ds_deduprecord); + assertEquals(89, orp_deduprecord); } @Test @@ -251,6 +295,8 @@ public class SparkDedupTest implements Serializable { long projects = jsc.textFile(testDedupGraphBasePath + "/project").count(); long datasource = jsc.textFile(testDedupGraphBasePath + "/datasource").count(); long softwares = jsc.textFile(testDedupGraphBasePath + "/software").count(); + long dataset = jsc.textFile(testDedupGraphBasePath + "/dataset").count(); + long otherresearchproduct = jsc.textFile(testDedupGraphBasePath + "/otherresearchproduct").count(); long mergedOrgs = spark.read() @@ -282,11 +328,33 @@ public class SparkDedupTest implements Serializable { .distinct() .count(); + long mergedDs = + spark.read() + .load(testOutputBasePath + "/" + testActionSetId + "/dataset_mergerel") + .as(Encoders.bean(Relation.class)) + .where("relClass=='merges'") + .javaRDD() + .map(Relation::getTarget) + .distinct() + .count(); + + long mergedOrp = + spark.read() + .load(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_mergerel") + .as(Encoders.bean(Relation.class)) + .where("relClass=='merges'") + .javaRDD() + .map(Relation::getTarget) + .distinct() + .count(); + assertEquals(897, publications); assertEquals(835, organizations); assertEquals(100, projects); assertEquals(100, datasource); assertEquals(200, softwares); + assertEquals(388, dataset); + assertEquals(517, otherresearchproduct); long deletedOrgs = jsc.textFile(testDedupGraphBasePath + "/organization") @@ -303,9 +371,21 @@ public class SparkDedupTest implements Serializable { .filter(this::isDeletedByInference) .count(); + long deletedDs = + jsc.textFile(testDedupGraphBasePath + "/dataset") + .filter(this::isDeletedByInference) + .count(); + + long deletedOrp = + jsc.textFile(testDedupGraphBasePath + "/otherresearchproduct") + .filter(this::isDeletedByInference) + .count(); + assertEquals(mergedOrgs, deletedOrgs); assertEquals(mergedPubs, deletedPubs); assertEquals(mergedSw, deletedSw); + assertEquals(mergedDs, deletedDs); + assertEquals(mergedOrp, deletedOrp); } @Test diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/ds.curr.conf.json b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/ds.curr.conf.json index 532900506..13b18e1c3 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/ds.curr.conf.json +++ b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/ds.curr.conf.json @@ -11,7 +11,9 @@ "maxChildren" : "100", "slidingWindowSize" : "200", "rootBuilder" : ["result", "resultProject_outcome_isProducedBy", "resultResult_publicationDataset_isRelatedTo", "resultResult_similarity_isAmongTopNSimilarDocuments", "resultResult_similarity_hasAmongTopNSimilarDocuments", "resultOrganization_affiliation_hasAuthorInstitution", "resultResult_part_hasPart", "resultResult_part_isPartOf", "resultResult_supplement_isSupplementTo", "resultResult_supplement_isSupplementedBy", "resultResult_version_isVersionOf" ], - "includeChildren" : "true" + "includeChildren" : "true", + "idPath" : "$.id", + "maxIterations" : 20 }, "pace" : { "clustering" : [ @@ -70,7 +72,8 @@ "field": "title", "comparator": "levensteinTitle", "weight": 1.0, - "countIfUndefined": "true" + "countIfUndefined": "true", + "params": {} } ], "threshold": 0.99, @@ -85,7 +88,7 @@ { "name" : "doi", "type" : "String", - "path" : "$.pid[@.qualifier.classid = 'doi'].value" + "path" : "$.pid[?(@.qualifier.classid == 'doi')].value" }, { "name" : "pid", @@ -96,7 +99,7 @@ { "name" : "title", "type" : "String", - "path" : "$.title[@.qualifier.classid = 'main title'].value", + "path" : "$.title[?(@.qualifier.classid == 'main title')].value", "length" : 250, "size" : 5 }, diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/orp.curr.conf.json b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/orp.curr.conf.json index 76e656743..5fb2a171a 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/orp.curr.conf.json +++ b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/orp.curr.conf.json @@ -11,7 +11,9 @@ "maxChildren" : "100", "slidingWindowSize" : "200", "rootBuilder" : [ "result", "resultProject_outcome_isProducedBy", "resultResult_publicationDataset_isRelatedTo", "resultResult_similarity_isAmongTopNSimilarDocuments", "resultResult_similarity_hasAmongTopNSimilarDocuments", "resultOrganization_affiliation_hasAuthorInstitution", "resultResult_part_hasPart", "resultResult_part_isPartOf", "resultResult_supplement_isSupplementTo", "resultResult_supplement_isSupplementedBy", "resultResult_version_isVersionOf" ], - "includeChildren" : "true" + "includeChildren" : "true", + "idPath" : "$.id", + "maxIterations" : 20 }, "pace" : { "clustering" : [ @@ -70,7 +72,8 @@ "field": "title", "comparator": "levensteinTitle", "weight": 1.0, - "countIfUndefined": "true" + "countIfUndefined": "true", + "params": {} } ], "threshold": 0.99, @@ -85,7 +88,7 @@ { "name" : "doi", "type" : "String", - "path" : "$.pid[@.qualifier.classid = 'doi'}].value" + "path" : "$.pid[?(@.qualifier.classid == 'doi')].value" }, { "name" : "pid", @@ -96,7 +99,7 @@ { "name" : "title", "type" : "String", - "path" : "$.title[@.qualifier.classid = 'main title'].value", + "path" : "$.title[?(@.qualifier.classid == 'main title')].value", "length" : 250, "size" : 5 }, diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/sw.curr.conf.json b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/sw.curr.conf.json index 815dd7a57..f4a107c74 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/sw.curr.conf.json +++ b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/conf/sw.curr.conf.json @@ -11,7 +11,9 @@ "maxChildren" : "100", "slidingWindowSize" : "200", "rootBuilder" : [ "result", "resultProject_outcome_isProducedBy", "resultResult_publicationDataset_isRelatedTo", "resultResult_similarity_isAmongTopNSimilarDocuments", "resultResult_similarity_hasAmongTopNSimilarDocuments", "resultOrganization_affiliation_hasAuthorInstitution", "resultResult_part_hasPart", "resultResult_part_isPartOf", "resultResult_supplement_isSupplementTo", "resultResult_supplement_isSupplementedBy", "resultResult_version_isVersionOf" ], - "includeChildren" : "true" + "includeChildren" : "true", + "idPath" : "$.id", + "maxIterations" : 20 }, "pace" : { "clustering" : [ diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/entities/dataset b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/entities/dataset index e69de29bb..cae43b1a7 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/entities/dataset +++ b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/entities/dataset @@ -0,0 +1,292 @@ +{"size": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "166076 Bytes"}, "geolocation": [], "dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:datasetarchive", "classname": "sysimport:crosswalk:datasetarchive", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": "dedup-similarity-result-levenstein", "invisible": false, "trust": "0.9"}, "resourcetype": {"classid": "Figure", "classname": "Figure", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}, "pid": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "doi", "classname": "doi", "schemeid": "dnet:pid_types", "schemename": "dnet:pid_types"}, "value": "10.6084/m9.figshare.c.3833377_d4"}], "contributor": [], "resulttype": {"classid": "dataset", "classname": "dataset", "schemeid": "dnet:result_typologies", "schemename": "dnet:result_typologies"}, "relevantdate": [], "collectedfrom": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}], "id": "50|datacite____::7fca4a3d59c1001c98a4c2658145a51d", "subject": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "Genetics"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "Ecology"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "http://www.abs.gov.au/ausstats/abs@.nsf/0/6BB427AB9696C225CA2574180004463E", "classname": "", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "69999 Biological Sciences not elsewhere classified"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "Inorganic Chemistry"}], "embargoenddate": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "lastupdatetimestamp": 0, "author": [{"surname": "Prieur", "name": "Vincent", "pid": [], "rank": 1, "affiliation": [], "fullname": "Prieur, Vincent"}, {"surname": "Clarke", "name": "Shannon", "pid": [], "rank": 2, "affiliation": [], "fullname": "Clarke, Shannon"}, {"surname": "", "name": "", "pid": [], "rank": 3, "affiliation": [], "fullname": "Luiz Brito"}, {"surname": "Mcewan", "name": "John", "pid": [], "rank": 4, "affiliation": [], "fullname": "McEwan, John"}, {"surname": "Lee", "name": "Michael", "pid": [], "rank": 5, "affiliation": [], "fullname": "Lee, Michael"}, {"surname": "", "name": "", "pid": [], "rank": 6, "affiliation": [], "fullname": "Rudiger Brauning"}, {"surname": "Dodds", "name": "Ken", "pid": [], "rank": 7, "affiliation": [], "fullname": "Dodds, Ken"}, {"surname": "", "name": "", "pid": [], "rank": 8, "affiliation": [], "fullname": "Beno\u0102\u017dt Auvray"}], "instance": [{"refereed": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "hostedby": {"dataInfo": 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The dataset includes 15226 records from 108 constituent datasets: \n 6 records from Observations occasionnelles Parc national des Pyr\u00e9n\u00e9es. \n 1 records from Donn\u00e9es ONF Faune-Flore-Fonge. \n 1 records from Collection zoologique Dr. Arnault (BOUM). \n 9 records from CRBPO : STOC, Baguage. \n 8 records from ORN. \n 1 records from Bird specimens of Toyota City Nature Sanctuary. \n 97 records from Bernice P. Bishop Museum. \n 3 records from Geographically tagged INSDC sequences. \n 14 records from LACM Vertebrate Collection. \n 3 records from LSUMZ Bird Tissues. \n 7 records from UWBM Ornithology Collection. \n 1 records from Field Museum of Natural History (Zoology) Bird Egg Collection. \n 2 records from UCLA Donald R. Dickey Bird and Mammal Collection. \n 4 records from UAZ Bird Collection. \n 704 records from Anillamiento SEO_Bird ringing. \n 18 records from LSUMZ Birds Collection. \n 2 records from Museo Provincial de Ciencias Naturales \u201cFlorentino Ameghino\u201d, Santa Fe, Argentina - Colecci\u00f3n Aves (MFA-ZV-Or). \n 5 records from Collection Ornithologie - SNSD. \n 2 records from Ministerio de Medio Ambiente, y Medio Rural y Marino. Direcci\u00f3n General de Medio Natural y Pol\u00edtica Forestal. Inventario Nacional de Biodiversidad 2007, Aves Reproductoras. \n 1 records from Aves Collection of Institute of Systematics and Evolution of Animals. \n 34 records from Collection Aves (bird skeletons) SMF. \n 4 records from Literature based species occurrence data of birds of North-East India. \n 1 records from DMNH Birds. \n 1 records from NYSM Birds. \n 3 records from Inventario Espa\u00f1ol de Especies Terrestres (MAGRAMA). \n 8 records from RBINS DaRWIN. \n 1 records from Bird specimens of Kawasaki Municipal Science Museum. \n 171 records from Natural History Museum (London) Collection Specimens. \n 5 records from The avian collection at the Natural History Museum, Oslo, Norway. \n 1 records from HSU Wildlife Birds. \n 90 records from Liste des esp\u00e8ces de la faune sauvage (Amphibiens, Mammif\u00e8res hors Chiropt\u00e8res, Oiseaux, Orthopt\u00e8res, Reptiles & Rhopaloc\u00e8res) observ\u00e9es selon le maillage communal fran\u00e7ais de la base de donn\u00e9es naturalistes Faune-France .. \n 12 records from Ornitho.eus. \n 15 records from CAS Ornithology (ORN). \n 3 records from Biodiversity Research and Teaching Collections - TCWC Vertebrates. \n 1 records from Aves MZS. \n 23 records from Observation.org, Nature data from the Netherlands. \n 23 records from Bird specimens of the Yamashina Institute for Ornithology. \n 2 records from Bird specimens of Saitama Museum of Natural History. \n 9 records from EPA_Var_2017_12_18. \n 49 records from The birds collection (ZO) of the Mus\u00e9um national d'Histoire Naturelle (MNHN - Paris). \n 10708 records from EOD - eBird Observation Dataset. \n 56 records from Museum of Comparative Zoology, Harvard University. \n 1 records from DMNS Bird Collection (Arctos). \n 13 records from Waarnemingen.be - Non-native animal occurrences in Flanders and the Brussels Capital Region, Belgium. \n 4 records from Collection ornithologique A. Ma\u00ebs. \n 14 records from Vertebrates of the Gothenburg Natural History Museum (GNM). \n 2 records from Zoological specimens of Gifu Prefectural Museum. \n 2 records from Bird Collection of Helsingborg Museums. \n 6 records from MVZ Egg and Nest Collection (Arctos). \n 2 records from MMNH Museum Bird Collection. \n 21 records from Naturalis Biodiversity Center (NL) - Aves. \n 12 records from naturgucker. \n 12 records from Animal Sound Archive. \n 17 records from KUBI Ornithology Collection. \n 4 records from Ibaraki Nature Museum, Birds collection. \n 79 records from iNaturalist Research-grade Observations. \n 18 records from SBMNH Vertebrate Zoology. \n 1 records from Natural History Museum Rotterdam (NL) - Chordata collection. \n 14 records from Collection Aves (spirit preserved) SMF. \n 21 records from CM Birds Collection. \n 3 records from Bird Specimens in the Museum of Nature and Human Activities, Hyogo, Japan. \n 4 records from Provincial Museum of Alberta, Edmonton, AB, Canada. Birds (Aves). \n 22 records from WFVZ Bird Collections. \n 16 records from Great Backyard Bird Count. \n 1 records from Donn\u00e9es du CEN Picardie concernant la Faune, Flore, Fonge. \n 12 records from Collection Aves (bird skins) SMF. \n 21 records from Oiseaux nicheurs de France m\u00e9tropolitaine 2009-2012 - Nidification probable. \n 9 records from Bird collection of National Museum of Nature and Science. \n 1 records from Birds collection of Abiko City Museum of Birds. \n 12 records from Oiseaux nicheurs de France m\u00e9tropolitaine 2009-2012 - Nidification possible. \n 3 records from PSM Vertebrates Collection. \n 2 records from MVZ Bird Observations (Arctos). \n 1 records from Donn\u00e9es de J\u00e9r\u00f4me FOUERT pour la r\u00e9alisation des DOCOB des zones N2000 g\u00e9r\u00e9es par le PNRLG (hors Rhopaloc\u00e8res). \n 148 records from VerteCAT: Banco de datos de vertebrados de Catalu\u00f1a. \n 144 records from NMNH Extant Specimen Records. \n 46 records from Macaulay Library Audio and Video Collection. \n 153 records from AMNH Bird Collection. \n 2 records from vertebrate specimens of Kumamoto City Museum. \n 6 records from MVZ Bird Collection (Arctos). \n 17 records from Vertebrate Zoology Division - Ornithology, Yale Peabody Museum. \n 194 records from Monitoring Sites 1000 Satoyama Birds. \n 1 records from Mus\u00e9e Vert ornithology collection. \n 1 records from Bird specimens of Miyazaki Prefecture Museum of Nature and History. \n 2 records from Palaeobiology - Vertebrate Comparative Osteology Collection - Royal Ontario Museum. \n 20 records from Donn\u00e9es acquises dans le cadre de l'activit\u00e9 du bureau d'\u00e9tude BIOTOPE (1994 - 2013). \n 164 records from Field Museum of Natural History (Zoology) Bird Collection. \n 11 records from Cowan Tetrapod Collection - Birds. \n 28 records from Ornithology Collection Passeriformes - Royal Ontario Museum. \n 420 records from Acoustic monitoring data of avian species inside and outside the evacuation zone of the Fukushima Daiichi power plant accident. \n 5 records from Bird specimen database of Kanagawa Prefectural Museum of Natural History. \n 1 records from MSU Mammalogy, Ornithology and Vertebrate Paleontology Collections. \n 2 records from DREAL_PACA_-_N2000_-_Conseil_G\u00e9n\u00e9ral_06_2017_12_18. \n 26 records from Oiseaux de France m\u00e9tropolitaine 2009-2013 en p\u00e9riode hivernale. \n 5 records from Museu de Ci\u00e8ncies Naturals de Barcelona: MCNB-Cord. \n 2 records from Donn\u00e9es naturalistes de Patrick HAFFNER. \n 1049 records from Aranzadi Ringing Scheme (bird ring-recovery data). \n 3 records from Vogeltrekstation (NL) - Historical Data on Timing of Ringing of Nestling Birds. \n 4 records from Donn\u00e9es issues de Clicnat (Base de donn\u00e9es naturaliste picarde g\u00e9r\u00e9e par Picardie Nature). \n 5 records from Bird Collection of Museum and Institute of Zoology PAS. \n 99 records from University of Michigan Museum of Zoology, Division of Birds. \n 5 records from SDNHM Birds Collection. \n 1 records from Donn\u00e9es de Luc BARBARO. \n 1 records from Museu de Ci\u00e8ncies Naturals de Barcelona: MCNB-Tissue. \n 130 records from Data collected on scitizen science web portal www.ornitho.cat. \n 2 records from Lund Museum of Zoology (MZLU). \n 49 records from Mesures compensatoires A65 (CDC Biodivsersit\u00e9). \n 20 records from Oiseaux nicheurs de France m\u00e9tropolitaine 2009-2012 - Nidification certaine. \n 1 records from Museo Argentino de Ciencias Naturales \"Bernardino Rivadavia\" (MACN). Ornithology National Collection (MACNOr). 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We have satellite images of disaster stricken areas such as refugee camps taken\u00a0at different times. We want to analyse or compare these images to see the progress of disaster relief operations or to measure level of severity in that particular area over a period of time. For example, if we have satellite images of refugee camps, we want to count shelters to see\u00a0if the number is\u00a0increasing or decreasing. In these days, UNOSAT has\u00a0staff dedicated to analyse and then classify objects in these images manually. This is an arduous task, takes a lot of time, inhibiting quick reaction from relief organizations.

\n\n

Conventionally, objects in images are identified by using color or shape features. But in our case, all objects such as shelters are arbitrary in shapes and color. Sometimes the background surface has the same color as the shelter. So, it is not possible to employ any conventional color or shape based image segmentation method.

\n\n

The solution we are proposing is \"Automated Feature Classification using Machine Learning\". My team at CERN openlab with UNOSAT are evaluating different machine learning based feature extraction algorithms.\u00a0Currently, we have evaluated Facebook's\u00a0DeepMask\u00a0and\u00a0SharpMask\u00a0object proposal techniques.

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A measurement of the cross section for the production of isolated prompt photons in pp collisions at a center-of-mass energy sqrt(s) = 7 TeV is presented. The results are based on an integrated luminosity of 4.6 fb-1 collected with the ATLAS detector at the LHC. The cross section is measured as a function of photon pseudorapidity and transverse energy in the kinematic range between 100 GeV and 1000 GeV and in the regions of pseudorapidity less than 1.37 and between 1.52 and 2.37. The results are compared to leading-order parton-shower Monte Carlo models and next-to-leading-order perturbative QCD calculations. Next-to-leading-order perturbative QCD calculations agree well with the measured cross sections as a function of transverse energy and pseudorapidity\n\nUPDATE (27 FEB 2015): The detailed information on bin-to-bin correlated and uncorrelated uncertainties has been made available as additional text file under the link below."}], "format": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "coverage": [], "device": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": 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[], "fullname": "Ochi, Atsuhiko"}, {"surname": "Ochoa", "name": "Ines", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Ochoa, Ines"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Okamura", "name": "Wataru", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Okamura, Wataru"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Oropeza Barrera", "name": "Cristina", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Oropeza Barrera, Cristina"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Ottersbach", "name": "John", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ottersbach, John"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ouellette", "name": "Eric", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Ouellette, Eric"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Ovcharova", "name": "Ana", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Ovcharova, Ana"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Simon", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Owen, Simon"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganis", "name": "Efstathios", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Paganis, Efstathios"}, {"surname": "Pahl", "name": "Christoph", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pahl, Christoph"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Pais", "name": "Preema", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pais, Preema"}, {"surname": "Pajchel", "name": "Katarina", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Pajchel, Katarina"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Paleari", "name": "Chiara", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paleari, Chiara"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Palma", "name": "Alberto", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Palma, Alberto"}, {"surname": "Palmer", "name": "Jody", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Palmer, Jody"}, {"surname": "Pan", "name": "Yibin", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Pan, Yibin"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panikashvili", "name": "Natalia", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Panikashvili, Natalia"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Papadelis", "name": "Aras", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Papadelis, Aras"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Park", "name": "Woochun", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Park, Woochun"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pashapour", "name": "Shabnaz", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Pashapour, Shabnaz"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Passeri", "name": "Antonio", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Passeri, Antonio"}, {"surname": "Pastore", "name": "Fernanda", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Pastore, Fernanda"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pa\u0301sztor", "name": "Gabriella", "pid": [], "rank": 1953, "affiliation": [], "fullname": "P\u00e1sztor, Gabriella"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Patel", "name": "Nikhul", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Patel, Nikhul"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Patricelli", "name": "Sergio", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Patricelli, Sergio"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearce", "name": "James", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Pearce, James"}, {"surname": "Pedersen", "name": "Maiken", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Pedersen, Maiken"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedraza Morales", "name": "Maria Isabel", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Pedraza Morales, Maria Isabel"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Pelikan", "name": "Daniel", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Pelikan, Daniel"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penning", "name": "Bjoern", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Penning, Bjoern"}, {"surname": "Penson", "name": "Alexander", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Penson, Alexander"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Perez Cavalcanti", "name": "Tiago", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Perez Cavalcanti, Tiago"}, {"surname": "Perez Codina", "name": "Estel", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Perez Codina, Estel"}, {"surname": "Pe\u0301rez Garci\u0301a-Estan\u0303", "name": "Mari\u0301a Teresa", "pid": [], "rank": 1971, "affiliation": [], "fullname": "P\u00e9rez Garc\u00eda-Esta\u00f1, Mar\u00eda Teresa"}, {"surname": "Perez Reale", "name": "Valeria", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Perez Reale, Valeria"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrino", "name": "Roberto", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Perrino, Roberto"}, {"surname": "Perrodo", "name": "Pascal", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Perrodo, Pascal"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Jorgen", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Petersen, Jorgen"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Petridis, Andreas"}, {"surname": "Petridou", "name": "Chariclia", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Petridou, Chariclia"}, {"surname": "Petrolo", "name": "Emilio", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Petrolo, Emilio"}, {"surname": "Petrucci", "name": "Fabrizio", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Petrucci, Fabrizio"}, {"surname": "Petschull", "name": "Dennis", "pid": [], "rank": 1988, "affiliation": [], "fullname": "Petschull, Dennis"}, {"surname": "Petteni", "name": "Michele", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Petteni, Michele"}, {"surname": "Pezoa", "name": "Raquel", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Pezoa, Raquel"}, {"surname": "Phan", "name": "Anna", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Phan, Anna"}, {"surname": "Phillips", "name": "Peter William", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Piccinini", "name": "Maurizio", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Piccinini, Maurizio"}, {"surname": "Piec", "name": "Sebastian Marcin", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Piec, Sebastian Marcin"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pignotti", "name": "David", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Pignotti, David"}, {"surname": "Pilcher", "name": "James", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Pilcher, James"}, {"surname": "Pilkington", "name": "Andrew", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Pilkington, Andrew"}, {"surname": "Pina", "name": "Joa\u0303o Antonio", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Pina, Jo\u00e3o Antonio"}, {"surname": "Pinamonti", "name": "Michele", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Pinamonti, Michele"}, {"surname": "Pinder", "name": "Alex", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Pinder, Alex"}, {"surname": "Pinfold", "name": "James", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Pinfold, James"}, {"surname": "Pingel", "name": "Almut", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Pingel, Almut"}, {"surname": "Pinto", "name": "Belmiro", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Pinto, Belmiro"}, {"surname": "Pizio", "name": "Caterina", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Pizio, Caterina"}, {"surname": "Pleier", "name": "Marc-Andre", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Pleier, Marc-Andre"}, {"surname": "Pleskot", "name": "Vojtech", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Pleskot, Vojtech"}, {"surname": "Plotnikova", "name": "Elena", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Plotnikova, Elena"}, {"surname": "Plucinski", "name": "Pawel", "pid": [], "rank": 2013, "affiliation": [], "fullname": "Plucinski, Pawel"}, {"surname": "Poddar", "name": "Sahill", "pid": [], "rank": 2014, "affiliation": [], "fullname": "Poddar, Sahill"}, {"surname": "Podlyski", "name": "Fabrice", "pid": [], "rank": 2015, "affiliation": [], "fullname": "Podlyski, Fabrice"}, {"surname": "Poettgen", "name": "Ruth", "pid": [], "rank": 2016, "affiliation": [], "fullname": "Poettgen, Ruth"}, {"surname": "Poggioli", "name": "Luc", "pid": [], "rank": 2017, "affiliation": [], "fullname": "Poggioli, Luc"}, {"surname": "Pohl", "name": "David-Leon", "pid": [], "rank": 2018, "affiliation": [], "fullname": "Pohl, David-Leon"}, {"surname": "Pohl", "name": "Martin", "pid": [], "rank": 2019, "affiliation": [], "fullname": "Pohl, Martin"}, {"surname": "Polesello", "name": "Giacomo", "pid": [], "rank": 2020, "affiliation": [], "fullname": "Polesello, Giacomo"}, {"surname": "Policicchio", "name": "Antonio", "pid": [], "rank": 2021, "affiliation": [], "fullname": "Policicchio, Antonio"}, {"surname": "Polifka", "name": "Richard", "pid": [], "rank": 2022, "affiliation": [], "fullname": "Polifka, Richard"}, {"surname": "Polini", "name": "Alessandro", "pid": [], "rank": 2023, "affiliation": [], "fullname": "Polini, Alessandro"}, {"surname": "Polychronakos", "name": "Venetios", "pid": [], "rank": 2024, "affiliation": [], "fullname": "Polychronakos, Venetios"}, {"surname": "Pomeroy", "name": "Daniel", "pid": [], "rank": 2025, "affiliation": [], "fullname": "Pomeroy, Daniel"}, {"surname": "Pomme\u0300s", "name": 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Present study looked at :
a) Overlap in altitude between the two species.
b) Which of the temperature and precipitation variables best predict marmot occurrence using MaxEnt software.
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The dataset includes 28566 records from 68 constituent datasets: \n 10 records from Donn\u00e9es naturalistes de Benoit MARTHA. \n 286 records from iNaturalist Research-grade Observations. \n 28 records from Observations occasionnelles Parc national des Pyr\u00e9n\u00e9es. \n 4 records from Donn\u00e9es ONF Faune-Flore-Fonge. \n 1 records from Donn\u00e9es naturalistes de Delphine MONTAGNE. \n 2 records from Donn\u00e9es du CEN Picardie concernant la Faune, Flore, Fonge. \n 12 records from Parc_Naturel_R\u00e9gional_des_Pr\u00e9alpes_d'Azur_2017_12_18. \n 1 records from SSNATV_2017_12_18. \n 6 records from Donn\u00e9es naturalistes de Xavier JAPIOT. \n 6 records from Museu de Ci\u00e8ncies Naturals de Barcelona: MCNB-Art. \n 1 records from Donn\u00e9es naturalistes de Damien AVRIL. \n 2 records from Donn\u00e9es naturalistes de Laurent PONCET. \n 33 records from SIRFF - FNE Centre-Val de Loire - Donn\u00e9es 2016. \n 107 records from Donn\u00e9es photographiques valid\u00e9es de la galerie du forum \"Le Monde des Insectes\". \n 4 records from AGIR_Ecologique_2017_12_18. \n 14194 records from Suivi de l'expansion du Frelon asiatique (Vespa velutina) : donn\u00e9es Frelon. \n 31 records from ZFMK Hymenoptera collection. \n 1 records from Hymenoptera collection of National Museum of Nature and Science. \n 11637 records from Suivi de l'expansion du Frelon asiatique (Vespa velutina) : donn\u00e9es Frelon. \n 11 records from NMNH Extant Specimen Records. \n 1 records from Field Museum of Natural History (Zoology) Insect, Arachnid and Myriapod Collection. \n 1 records from Donn\u00e9es naturalistes de Monsieur CSUTOROS Antoine. \n 1 records from Parc_Naturel_R\u00e9gional_du_Verdon_2017_12_18. \n 2 records from Parc_National_des_Calanques_2017_12_18. \n 2 records from DREAL Auvergne - Insectes - 2015. \n 5 records from Donn\u00e9es naturalistes de Lo\u00efc SALAUN. \n 2 records from The vespid fauna of Pakistan. \n 1 records from Donn\u00e9es naturalistes de Philippe GOURDAIN. \n 193 records from Suivi Photographique des Insectes Pollinisateurs (SPIPOLL). \n 4 records from RNF - Donn\u00e9es du CEN Centre. \n 1 records from Natural History Museum (London) Collection Specimens. \n 1 records from Donn\u00e9es RNN LPO. \n 5 records from Naturalis Biodiversity Center (NL) - Hymenoptera. \n 1298 records from Taiwan Forestry Research Institute. \n 2 records from Amis_des_Marais_du_Vigueirat_2017_12_18. \n 1 records from Donn\u00e9es acquises dans le cadre de l'activit\u00e9 du bureau d'\u00e9tude BIOTOPE (1994 - 2013). \n 2 records from Donn\u00e9es naturalistes de Willy CHENEAU. \n 1 records from Donn\u00e9es naturalistes de Stephan DUBEZ. \n 10 records from Naturalis Biodiversity Center (NL) - Museum collection digitized at storage unit level. \n 2 records from Natural History Museum Rotterdam (NL) - Insecta collection. \n 5 records from Donn\u00e9es naturalistes d'Adrien CHOREIN. \n 72 records from Inventaire hivernal des nids de frelon asiatique. \n 14 records from Natusfera Citizen Science Observation Dataset. \n 25 records from Observation.org, Nature data from the Netherlands. \n 35 records from SIRFF - FNE Centre-Val de Loire - Donn\u00e9es 2015. \n 5 records from Tour_du_Valat_2017_12_18. \n 13 records from Donn\u00e9es issues de Clicnat (Base de donn\u00e9es naturaliste picarde g\u00e9r\u00e9e par Picardie Nature). \n 168 records from The Hymenoptera collection (EY) of the Mus\u00e9um national d'Histoire naturelle (MNHN - Paris). \n 4 records from Zoologische Staatssammlung Muenchen - International Barcode of Life (iBOL) - Barcode of Life Project Specimen Data. \n 1 records from Donn\u00e9es naturalistes de St\u00e9phane VASSEL. \n 2 records from Groupe_Lamo_Naturae_2017_12_18. \n 19 records from Parc_National_de_Port_Cros_2017_12_18. \n 15 records from Biologiezentrum Linz. \n 1 records from Donn\u00e9es naturalistes de Pierre FRAPA. \n 36 records from Observations naturalistes et collection entomologique de Julien TOUROULT. \n 1 records from Donn\u00e9es naturalistes de Benoit FONTAINE. \n 12 records from Donn\u00e9es naturalistes de CERCOPE (Jean-Louis PRATZ). \n 1 records from Inventaire et suivis d'esp\u00e8ces dans le Parc national des C\u00e9vennes. \n 1 records from Donn\u00e9es naturalistes d'Olivier ESCUDER. \n 103 records from Donn\u00e9es naturalistes de Pierre HUGUENY. \n 1 records from Mesures compensatoires A65 (CDC Biodivsersit\u00e9). \n 1 records from Donn\u00e9es d'occurrences Esp\u00e8ces issues de l'inventaire des ZNIEFF. \n 8 records from naturgucker. \n 1 records from Natural History Museum, University of Tartu. \n 101 records from RNF - Donn\u00e9es de l'association Vivarmor Nature. \n 3 records from Donn\u00e9es RNN Marais de M\u00fcllembourg. \n 2 records from Donn\u00e9es naturalistes de Marie-France LECCIA. \n 4 records from Parc_National_du_Mercantour_2017_12_18. 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{"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1835, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nicquevert", "name": "Bertrand", "pid": [], "rank": 1836, "affiliation": [], "fullname": "Nicquevert, Bertrand"}, {"surname": "Niedercorn", "name": "Francois", "pid": [], "rank": 1837, "affiliation": [], "fullname": "Niedercorn, Francois"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Nikiforou", "name": "Nikiforos", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Nikiforou, Nikiforos"}, {"surname": "Nikiforov", "name": "Andriy", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Nikiforov, Andriy"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolics", "name": "Katalin", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Nikolics, Katalin"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nobe", "name": "Takuya", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Nobe, Takuya"}, {"surname": "Nodulman", "name": "Lawrence", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Nodulman, Lawrence"}, {"surname": "Nomachi", "name": 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"pid": [], "rank": 1859, "affiliation": [], "fullname": "Nunes Hanninger, Guilherme"}, {"surname": "Nunnemann", "name": "Thomas", "pid": [], "rank": 1860, "affiliation": [], "fullname": "Nunnemann, Thomas"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "O Brien", "name": "Brendan Joseph", "pid": [], "rank": 1862, "affiliation": [], "fullname": "O'Brien, Brendan Joseph"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1863, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1864, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakes", "name": "Louise Beth", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Oakes, Louise Beth"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Ochoa", "name": "Ines", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Ochoa, Ines"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Okamura", "name": "Wataru", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Okamura, Wataru"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Oropeza Barrera", "name": "Cristina", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Oropeza Barrera, Cristina"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Ottersbach", "name": "John", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ottersbach, John"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ouellette", "name": "Eric", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Ouellette, Eric"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Ovcharova", "name": "Ana", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Ovcharova, Ana"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Simon", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Owen, Simon"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganis", "name": "Efstathios", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Paganis, Efstathios"}, {"surname": "Pahl", "name": "Christoph", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pahl, Christoph"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Pais", "name": "Preema", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pais, Preema"}, {"surname": "Pajchel", "name": "Katarina", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Pajchel, Katarina"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Paleari", "name": "Chiara", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paleari, Chiara"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Palma", "name": "Alberto", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Palma, Alberto"}, {"surname": "Palmer", "name": "Jody", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Palmer, Jody"}, {"surname": "Pan", "name": "Yibin", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Pan, Yibin"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panikashvili", "name": "Natalia", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Panikashvili, Natalia"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Papadelis", "name": "Aras", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Papadelis, Aras"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Park", "name": "Woochun", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Park, Woochun"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pashapour", "name": "Shabnaz", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Pashapour, Shabnaz"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Passeri", "name": "Antonio", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Passeri, Antonio"}, {"surname": "Pastore", "name": "Fernanda", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Pastore, Fernanda"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pa\u0301sztor", "name": "Gabriella", "pid": [], "rank": 1953, "affiliation": [], "fullname": "P\u00e1sztor, Gabriella"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Patel", "name": "Nikhul", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Patel, Nikhul"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Patricelli", "name": "Sergio", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Patricelli, Sergio"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearce", "name": "James", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Pearce, James"}, {"surname": "Pedersen", "name": "Maiken", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Pedersen, Maiken"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedraza Morales", "name": "Maria Isabel", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Pedraza Morales, Maria Isabel"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Pelikan", "name": "Daniel", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Pelikan, Daniel"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penning", "name": "Bjoern", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Penning, Bjoern"}, {"surname": "Penson", "name": "Alexander", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Penson, Alexander"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Perez Cavalcanti", "name": "Tiago", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Perez Cavalcanti, Tiago"}, {"surname": "Perez Codina", "name": "Estel", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Perez Codina, Estel"}, {"surname": "Pe\u0301rez Garci\u0301a-Estan\u0303", "name": "Mari\u0301a Teresa", "pid": [], "rank": 1971, "affiliation": [], "fullname": "P\u00e9rez Garc\u00eda-Esta\u00f1, Mar\u00eda Teresa"}, {"surname": "Perez Reale", "name": "Valeria", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Perez Reale, Valeria"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrino", "name": "Roberto", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Perrino, Roberto"}, {"surname": "Perrodo", "name": "Pascal", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Perrodo, Pascal"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Jorgen", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Petersen, Jorgen"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Petridis, Andreas"}, {"surname": "Petridou", "name": "Chariclia", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Petridou, Chariclia"}, {"surname": "Petrolo", "name": "Emilio", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Petrolo, Emilio"}, {"surname": "Petrucci", "name": "Fabrizio", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Petrucci, Fabrizio"}, {"surname": "Petschull", "name": "Dennis", "pid": [], "rank": 1988, "affiliation": [], "fullname": "Petschull, Dennis"}, {"surname": "Petteni", "name": "Michele", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Petteni, Michele"}, {"surname": "Pezoa", "name": "Raquel", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Pezoa, Raquel"}, {"surname": "Phan", "name": "Anna", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Phan, Anna"}, {"surname": "Phillips", "name": "Peter William", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Piccinini", "name": "Maurizio", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Piccinini, Maurizio"}, {"surname": "Piec", "name": "Sebastian Marcin", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Piec, Sebastian Marcin"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pignotti", "name": "David", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Pignotti, David"}, {"surname": "Pilcher", "name": "James", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Pilcher, James"}, {"surname": "Pilkington", "name": "Andrew", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Pilkington, Andrew"}, {"surname": "Pina", "name": "Joa\u0303o Antonio", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Pina, Jo\u00e3o Antonio"}, {"surname": "Pinamonti", "name": "Michele", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Pinamonti, Michele"}, {"surname": "Pinder", "name": "Alex", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Pinder, Alex"}, {"surname": "Pinfold", "name": "James", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Pinfold, James"}, {"surname": "Pingel", "name": "Almut", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Pingel, Almut"}, {"surname": "Pinto", "name": "Belmiro", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Pinto, Belmiro"}, {"surname": "Pizio", "name": "Caterina", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Pizio, Caterina"}, {"surname": "Pleier", "name": "Marc-Andre", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Pleier, Marc-Andre"}, {"surname": "Pleskot", "name": "Vojtech", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Pleskot, Vojtech"}, {"surname": "Plotnikova", "name": "Elena", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Plotnikova, Elena"}, {"surname": "Plucinski", "name": "Pawel", "pid": [], "rank": 2013, "affiliation": [], "fullname": "Plucinski, Pawel"}, {"surname": "Poddar", "name": "Sahill", "pid": [], "rank": 2014, "affiliation": [], "fullname": "Poddar, Sahill"}, {"surname": "Podlyski", "name": "Fabrice", "pid": [], "rank": 2015, "affiliation": [], "fullname": "Podlyski, Fabrice"}, {"surname": "Poettgen", "name": "Ruth", "pid": [], "rank": 2016, "affiliation": [], "fullname": "Poettgen, Ruth"}, {"surname": "Poggioli", "name": "Luc", "pid": [], "rank": 2017, "affiliation": [], "fullname": "Poggioli, Luc"}, {"surname": "Pohl", "name": "David-Leon", "pid": [], "rank": 2018, "affiliation": [], "fullname": "Pohl, David-Leon"}, {"surname": "Pohl", "name": "Martin", "pid": [], "rank": 2019, "affiliation": [], "fullname": "Pohl, Martin"}, {"surname": "Polesello", "name": "Giacomo", "pid": [], "rank": 2020, "affiliation": [], "fullname": "Polesello, Giacomo"}, {"surname": "Policicchio", "name": "Antonio", "pid": [], "rank": 2021, "affiliation": [], "fullname": "Policicchio, Antonio"}, {"surname": "Polifka", "name": "Richard", "pid": [], "rank": 2022, "affiliation": [], "fullname": "Polifka, Richard"}, {"surname": "Polini", "name": "Alessandro", "pid": [], "rank": 2023, "affiliation": [], "fullname": "Polini, Alessandro"}, {"surname": "Polychronakos", "name": "Venetios", "pid": [], 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available in GBIF matching the query: TaxonKey: Leiothrix lutea (Scopoli, 1786). The dataset includes 15226 records from 108 constituent datasets: \n 6 records from Observations occasionnelles Parc national des Pyr\u00e9n\u00e9es. \n 1 records from Donn\u00e9es ONF Faune-Flore-Fonge. \n 1 records from Collection zoologique Dr. Arnault (BOUM). \n 9 records from CRBPO : STOC, Baguage. \n 8 records from ORN. \n 1 records from Bird specimens of Toyota City Nature Sanctuary. \n 97 records from Bernice P. Bishop Museum. \n 3 records from Geographically tagged INSDC sequences. \n 14 records from LACM Vertebrate Collection. \n 3 records from LSUMZ Bird Tissues. \n 7 records from UWBM Ornithology Collection. \n 1 records from Field Museum of Natural History (Zoology) Bird Egg Collection. \n 2 records from UCLA Donald R. Dickey Bird and Mammal Collection. \n 4 records from UAZ Bird Collection. \n 704 records from Anillamiento SEO_Bird ringing. \n 18 records from LSUMZ Birds Collection. \n 2 records from Museo Provincial de Ciencias Naturales \u201cFlorentino Ameghino\u201d, Santa Fe, Argentina - Colecci\u00f3n Aves (MFA-ZV-Or). \n 5 records from Collection Ornithologie - SNSD. \n 2 records from Ministerio de Medio Ambiente, y Medio Rural y Marino. Direcci\u00f3n General de Medio Natural y Pol\u00edtica Forestal. Inventario Nacional de Biodiversidad 2007, Aves Reproductoras. \n 1 records from Aves Collection of Institute of Systematics and Evolution of Animals. \n 34 records from Collection Aves (bird skeletons) SMF. \n 4 records from Literature based species occurrence data of birds of North-East India. \n 1 records from DMNH Birds. \n 1 records from NYSM Birds. \n 3 records from Inventario Espa\u00f1ol de Especies Terrestres (MAGRAMA). \n 8 records from RBINS DaRWIN. \n 1 records from Bird specimens of Kawasaki Municipal Science Museum. \n 171 records from Natural History Museum (London) Collection Specimens. \n 5 records from The avian collection at the Natural History Museum, Oslo, Norway. \n 1 records from HSU Wildlife Birds. \n 90 records from Liste des esp\u00e8ces de la faune sauvage (Amphibiens, Mammif\u00e8res hors Chiropt\u00e8res, Oiseaux, Orthopt\u00e8res, Reptiles & Rhopaloc\u00e8res) observ\u00e9es selon le maillage communal fran\u00e7ais de la base de donn\u00e9es naturalistes Faune-France .. \n 12 records from Ornitho.eus. \n 15 records from CAS Ornithology (ORN). \n 3 records from Biodiversity Research and Teaching Collections - TCWC Vertebrates. \n 1 records from Aves MZS. \n 23 records from Observation.org, Nature data from the Netherlands. \n 23 records from Bird specimens of the Yamashina Institute for Ornithology. \n 2 records from Bird specimens of Saitama Museum of Natural History. \n 9 records from EPA_Var_2017_12_18. \n 49 records from The birds collection (ZO) of the Mus\u00e9um national d'Histoire Naturelle (MNHN - Paris). \n 10708 records from EOD - eBird Observation Dataset. \n 56 records from Museum of Comparative Zoology, Harvard University. \n 1 records from DMNS Bird Collection (Arctos). \n 13 records from Waarnemingen.be - Non-native animal occurrences in Flanders and the Brussels Capital Region, Belgium. \n 4 records from Collection ornithologique A. Ma\u00ebs. \n 14 records from Vertebrates of the Gothenburg Natural History Museum (GNM). \n 2 records from Zoological specimens of Gifu Prefectural Museum. \n 2 records from Bird Collection of Helsingborg Museums. \n 6 records from MVZ Egg and Nest Collection (Arctos). \n 2 records from MMNH Museum Bird Collection. \n 21 records from Naturalis Biodiversity Center (NL) - Aves. \n 12 records from naturgucker. \n 12 records from Animal Sound Archive. \n 17 records from KUBI Ornithology Collection. \n 4 records from Ibaraki Nature Museum, Birds collection. \n 79 records from iNaturalist Research-grade Observations. \n 18 records from SBMNH Vertebrate Zoology. \n 1 records from Natural History Museum Rotterdam (NL) - Chordata collection. \n 14 records from Collection Aves (spirit preserved) SMF. \n 21 records from CM Birds Collection. \n 3 records from Bird Specimens in the Museum of Nature and Human Activities, Hyogo, Japan. \n 4 records from Provincial Museum of Alberta, Edmonton, AB, Canada. Birds (Aves). \n 22 records from WFVZ Bird Collections. \n 16 records from Great Backyard Bird Count. \n 1 records from Donn\u00e9es du CEN Picardie concernant la Faune, Flore, Fonge. \n 12 records from Collection Aves (bird skins) SMF. \n 21 records from Oiseaux nicheurs de France m\u00e9tropolitaine 2009-2012 - Nidification probable. \n 9 records from Bird collection of National Museum of Nature and Science. \n 1 records from Birds collection of Abiko City Museum of Birds. \n 12 records from Oiseaux nicheurs de France m\u00e9tropolitaine 2009-2012 - Nidification possible. \n 3 records from PSM Vertebrates Collection. \n 2 records from MVZ Bird Observations (Arctos). \n 1 records from Donn\u00e9es de J\u00e9r\u00f4me FOUERT pour la r\u00e9alisation des DOCOB des zones N2000 g\u00e9r\u00e9es par le PNRLG (hors Rhopaloc\u00e8res). \n 148 records from VerteCAT: Banco de datos de vertebrados de Catalu\u00f1a. \n 144 records from NMNH Extant Specimen Records. \n 46 records from Macaulay Library Audio and Video Collection. \n 153 records from AMNH Bird Collection. \n 2 records from vertebrate specimens of Kumamoto City Museum. \n 6 records from MVZ Bird Collection (Arctos). \n 17 records from Vertebrate Zoology Division - Ornithology, Yale Peabody Museum. \n 194 records from Monitoring Sites 1000 Satoyama Birds. \n 1 records from Mus\u00e9e Vert ornithology collection. \n 1 records from Bird specimens of Miyazaki Prefecture Museum of Nature and History. \n 2 records from Palaeobiology - Vertebrate Comparative Osteology Collection - Royal Ontario Museum. \n 20 records from Donn\u00e9es acquises dans le cadre de l'activit\u00e9 du bureau d'\u00e9tude BIOTOPE (1994 - 2013). \n 164 records from Field Museum of Natural History (Zoology) Bird Collection. \n 11 records from Cowan Tetrapod Collection - Birds. \n 28 records from Ornithology Collection Passeriformes - Royal Ontario Museum. \n 420 records from Acoustic monitoring data of avian species inside and outside the evacuation zone of the Fukushima Daiichi power plant accident. \n 5 records from Bird specimen database of Kanagawa Prefectural Museum of Natural History. \n 1 records from MSU Mammalogy, Ornithology and Vertebrate Paleontology Collections. \n 2 records from DREAL_PACA_-_N2000_-_Conseil_G\u00e9n\u00e9ral_06_2017_12_18. \n 26 records from Oiseaux de France m\u00e9tropolitaine 2009-2013 en p\u00e9riode hivernale. \n 5 records from Museu de Ci\u00e8ncies Naturals de Barcelona: MCNB-Cord. \n 2 records from Donn\u00e9es naturalistes de Patrick HAFFNER. \n 1049 records from Aranzadi Ringing Scheme (bird ring-recovery data). \n 3 records from Vogeltrekstation (NL) - Historical Data on Timing of Ringing of Nestling Birds. \n 4 records from Donn\u00e9es issues de Clicnat (Base de donn\u00e9es naturaliste picarde g\u00e9r\u00e9e par Picardie Nature). \n 5 records from Bird Collection of Museum and Institute of Zoology PAS. \n 99 records from University of Michigan Museum of Zoology, Division of Birds. \n 5 records from SDNHM Birds Collection. \n 1 records from Donn\u00e9es de Luc BARBARO. \n 1 records from Museu de Ci\u00e8ncies Naturals de Barcelona: MCNB-Tissue. \n 130 records from Data collected on scitizen science web portal www.ornitho.cat. \n 2 records from Lund Museum of Zoology (MZLU). \n 49 records from Mesures compensatoires A65 (CDC Biodivsersit\u00e9). \n 20 records from Oiseaux nicheurs de France m\u00e9tropolitaine 2009-2012 - Nidification certaine. \n 1 records from Museo Argentino de Ciencias Naturales \"Bernardino Rivadavia\" (MACN). Ornithology National Collection (MACNOr). 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Photograph of the type locality. The holotype was collected ca. 4 m above the ground from the trunk of the strangling fig in the center of the photo, just to the right of the road. Note the Monstera sp. vines (left foreground) and the epiphytic Asplenium sp. ferns (center and right center) which were common in the forest. Photo by A. 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These cells can be irreversibly differentiated into NT-neurons in the presence of retinoic acid and non-dividing cultures NT-neurons can be maintained for up to several months without retinoic acid. HSV is capable of infecting and replicating in differentiated NT-neurons and thus differentiated NT-neurons provide a ready source of human post-mitotic cells which can be useful to study certain aspects of the interaction of HSV and the neuron. Microarray analysis was used to examine how HSV-1 infection modulates cellular transcription in human NT-neurons, focusing on changes that take place during the first 24 hours following infection and compared to changes resulting from infection with inactivated virus. In addition, the transcriptional changes resulting from virus infection of neurons were compared to those observed in primary human fibroblasts. At early times after HSV infection a small number of cellular transcripts in NT-Neurons appear to be increased in abundance. Most of these transcripts that are up-regulated after infection are not unique to neuronal cells, and possibly represent a common cellular response to HSV infection. A few transcripts were not detected in infected human fibroblasts and may represent part of a transcriptional profile specific to this type of human neuronal cell. In contrast to the situation at early times after infection, analysis of cellular transcripts in NT-neurons at late times after infection is complicated by the overall profound decrease in cellular transcription. Thus, microarray analysis appeared to be most useful as a screening method for transcription changes following infection at early times after virus infection of NT-neurons. 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[], "rank": 1802, "affiliation": [], "fullname": "Nakamura, Tomoaki"}, {"surname": "Nakano", "name": "Itsuo", "pid": [], "rank": 1803, "affiliation": [], "fullname": "Nakano, Itsuo"}, {"surname": "Namasivayam", "name": "Harisankar", "pid": [], "rank": 1804, "affiliation": [], "fullname": "Namasivayam, Harisankar"}, {"surname": "Nanava", "name": "Gizo", "pid": [], "rank": 1805, "affiliation": [], "fullname": "Nanava, Gizo"}, {"surname": "Napier", "name": "Austin", "pid": [], "rank": 1806, "affiliation": [], "fullname": "Napier, Austin"}, {"surname": "Narayan", "name": "Rohin", "pid": [], "rank": 1807, "affiliation": [], "fullname": "Narayan, Rohin"}, {"surname": "Nash", "name": "Michael", "pid": [], "rank": 1808, "affiliation": [], "fullname": "Nash, Michael"}, {"surname": "Nattermann", "name": "Till", "pid": [], "rank": 1809, "affiliation": [], "fullname": "Nattermann, Till"}, {"surname": "Naumann", "name": "Thomas", "pid": [], "rank": 1810, "affiliation": [], "fullname": "Naumann, Thomas"}, {"surname": "Navarro", "name": "Gabriela", "pid": [], "rank": 1811, "affiliation": [], "fullname": "Navarro, Gabriela"}, {"surname": "Neal", "name": "Homer", "pid": [], "rank": 1812, "affiliation": [], "fullname": "Neal, Homer"}, {"surname": "Nechaeva", "name": "Polina", "pid": [], "rank": 1813, "affiliation": [], "fullname": "Nechaeva, Polina"}, {"surname": "Neep", "name": "Thomas James", "pid": [], "rank": 1814, "affiliation": [], "fullname": "Neep, Thomas James"}, {"surname": "Negri", "name": "Andrea", "pid": [], "rank": 1815, "affiliation": [], "fullname": "Negri, Andrea"}, {"surname": "Negri", "name": "Guido", "pid": [], "rank": 1816, "affiliation": [], "fullname": "Negri, Guido"}, {"surname": "Negrini", "name": "Matteo", "pid": [], "rank": 1817, "affiliation": [], "fullname": "Negrini, Matteo"}, {"surname": "Nektarijevic", "name": "Snezana", "pid": [], "rank": 1818, "affiliation": [], "fullname": "Nektarijevic, Snezana"}, {"surname": "Nelson", "name": "Andrew", "pid": [], "rank": 1819, "affiliation": [], "fullname": "Nelson, Andrew"}, {"surname": "Nelson", "name": "Timothy Knight", "pid": [], "rank": 1820, "affiliation": [], "fullname": "Nelson, Timothy Knight"}, {"surname": "Nemecek", "name": "Stanislav", "pid": [], "rank": 1821, "affiliation": [], "fullname": "Nemecek, Stanislav"}, {"surname": "Nemethy", "name": "Peter", "pid": [], "rank": 1822, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nepomuceno", "name": "Andre Asevedo", "pid": [], "rank": 1823, "affiliation": [], "fullname": "Nepomuceno, Andre Asevedo"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1824, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1825, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neumann", "name": "Manuel", "pid": [], "rank": 1826, "affiliation": [], "fullname": "Neumann, Manuel"}, {"surname": "Neusiedl", "name": "Andrea", "pid": [], "rank": 1827, "affiliation": [], "fullname": "Neusiedl, Andrea"}, {"surname": "Neves", "name": "Ricardo", "pid": [], "rank": 1828, "affiliation": [], "fullname": "Neves, Ricardo"}, {"surname": "Nevski", "name": "Pavel", "pid": [], "rank": 1829, "affiliation": [], "fullname": "Nevski, Pavel"}, {"surname": "Newcomer", "name": "Mitchel", "pid": [], "rank": 1830, "affiliation": [], "fullname": "Newcomer, Mitchel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1831, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Nguyen", "name": "Duong Hai", "pid": [], "rank": 1832, "affiliation": [], "fullname": "Nguyen, Duong Hai"}, {"surname": "", "name": "", "pid": [], "rank": 1833, "affiliation": [], "fullname": "Nguyen Thi Hong, Van"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1834, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1835, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nicquevert", "name": "Bertrand", "pid": [], "rank": 1836, "affiliation": [], "fullname": "Nicquevert, Bertrand"}, {"surname": "Niedercorn", "name": "Francois", "pid": [], "rank": 1837, "affiliation": [], "fullname": "Niedercorn, Francois"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Nikiforou", "name": "Nikiforos", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Nikiforou, Nikiforos"}, {"surname": "Nikiforov", "name": "Andriy", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Nikiforov, Andriy"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolics", "name": "Katalin", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Nikolics, Katalin"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nobe", "name": "Takuya", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Nobe, Takuya"}, {"surname": "Nodulman", "name": "Lawrence", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Nodulman, Lawrence"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1851, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1852, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Norberg", "name": "Scarlet", "pid": [], "rank": 1853, "affiliation": [], "fullname": "Norberg, Scarlet"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1854, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Novakova", "name": "Jana", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Novakova, Jana"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozka", "name": "Libor", "pid": [], "rank": 1857, "affiliation": [], "fullname": "Nozka, Libor"}, {"surname": "Nuncio-Quiroz", "name": "Adriana-Elizabeth", "pid": [], "rank": 1858, "affiliation": [], "fullname": "Nuncio-Quiroz, Adriana-Elizabeth"}, {"surname": "Nunes Hanninger", "name": "Guilherme", "pid": [], "rank": 1859, "affiliation": [], "fullname": "Nunes Hanninger, Guilherme"}, {"surname": "Nunnemann", "name": "Thomas", "pid": [], "rank": 1860, "affiliation": [], "fullname": "Nunnemann, Thomas"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "O Brien", "name": "Brendan Joseph", "pid": [], "rank": 1862, "affiliation": [], "fullname": "O'Brien, Brendan Joseph"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1863, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1864, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakes", "name": "Louise Beth", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Oakes, Louise Beth"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Ochoa", "name": "Ines", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Ochoa, Ines"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Okamura", "name": "Wataru", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Okamura, Wataru"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Oropeza Barrera", "name": "Cristina", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Oropeza Barrera, Cristina"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Ottersbach", "name": "John", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ottersbach, John"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ouellette", "name": "Eric", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Ouellette, Eric"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Ovcharova", "name": "Ana", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Ovcharova, Ana"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Simon", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Owen, Simon"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganis", "name": "Efstathios", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Paganis, Efstathios"}, {"surname": "Pahl", "name": "Christoph", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pahl, Christoph"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Pais", "name": "Preema", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pais, Preema"}, {"surname": "Pajchel", "name": "Katarina", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Pajchel, Katarina"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Paleari", "name": "Chiara", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paleari, Chiara"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Palma", "name": "Alberto", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Palma, Alberto"}, {"surname": "Palmer", "name": "Jody", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Palmer, Jody"}, {"surname": "Pan", "name": "Yibin", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Pan, Yibin"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panikashvili", "name": "Natalia", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Panikashvili, Natalia"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Papadelis", "name": "Aras", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Papadelis, Aras"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Park", "name": "Woochun", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Park, Woochun"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pashapour", "name": "Shabnaz", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Pashapour, Shabnaz"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Passeri", "name": "Antonio", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Passeri, Antonio"}, {"surname": "Pastore", "name": "Fernanda", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Pastore, Fernanda"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pa\u0301sztor", "name": "Gabriella", "pid": [], "rank": 1953, "affiliation": [], "fullname": "P\u00e1sztor, Gabriella"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Patel", "name": "Nikhul", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Patel, Nikhul"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Patricelli", "name": "Sergio", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Patricelli, Sergio"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearce", "name": "James", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Pearce, James"}, {"surname": "Pedersen", "name": "Maiken", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Pedersen, Maiken"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedraza Morales", "name": "Maria Isabel", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Pedraza Morales, Maria Isabel"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Pelikan", "name": "Daniel", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Pelikan, Daniel"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penning", "name": "Bjoern", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Penning, Bjoern"}, {"surname": "Penson", "name": "Alexander", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Penson, Alexander"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Perez Cavalcanti", "name": "Tiago", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Perez Cavalcanti, Tiago"}, {"surname": "Perez Codina", "name": "Estel", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Perez Codina, Estel"}, {"surname": "Pe\u0301rez Garci\u0301a-Estan\u0303", "name": "Mari\u0301a Teresa", "pid": [], "rank": 1971, "affiliation": [], "fullname": "P\u00e9rez Garc\u00eda-Esta\u00f1, Mar\u00eda Teresa"}, {"surname": "Perez Reale", "name": "Valeria", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Perez Reale, Valeria"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrino", "name": "Roberto", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Perrino, Roberto"}, {"surname": "Perrodo", "name": "Pascal", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Perrodo, Pascal"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Jorgen", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Petersen, Jorgen"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], 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"Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Piccinini", "name": "Maurizio", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Piccinini, Maurizio"}, {"surname": "Piec", "name": "Sebastian Marcin", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Piec, Sebastian Marcin"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pignotti", "name": "David", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Pignotti, 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A measurement of the cross section for the production of isolated prompt photons in pp collisions at a center-of-mass energy sqrt(s) = 7 TeV is presented. The results are based on an integrated luminosity of 4.6 fb-1 collected with the ATLAS detector at the LHC. The cross section is measured as a function of photon pseudorapidity and transverse energy in the kinematic range between 100 GeV and 1000 GeV and in the regions of pseudorapidity less than 1.37 and between 1.52 and 2.37. The results are compared to leading-order parton-shower Monte Carlo models and next-to-leading-order perturbative QCD calculations. Next-to-leading-order perturbative QCD calculations agree well with the measured cross sections as a function of transverse energy and pseudorapidity\n\nUPDATE (27 FEB 2015): The detailed information on bin-to-bin correlated and uncorrelated uncertainties has been made available as additional text file under the link below."}], "format": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2015-01-01"}, "coverage": [], "device": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, 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A measurement of the cross section for the production of isolated prompt photons in pp collisions at a center-of-mass energy sqrt(s) = 7 TeV is presented. The results are based on an integrated luminosity of 4.6 fb-1 collected with the ATLAS detector at the LHC. The cross section is measured as a function of photon pseudorapidity and transverse energy in the kinematic range between 100 GeV and 1000 GeV and in the regions of pseudorapidity less than 1.37 and between 1.52 and 2.37. The results are compared to leading-order parton-shower Monte Carlo models and next-to-leading-order perturbative QCD calculations. 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The dataset includes 44852 records from 405 constituent datasets: 3 records from Bioimages. 4 records from CBDC: Cumbria Wildlife Trust: survey records from 1970 - 2007 of County Wildlife Sites.. 1 records from Merseyside BioBank (unverified). 2 records from NBIS Records to December 2016. 142 records from Marie-Victorin Herbarium (MT) - Plantes vasculaires. 1 records from OEH Atlas of NSW Wildlife. 76 records from University of British Columbia Herbarium (UBC) - Vascular Plant Collection. 376 records from Phanerogamic Botanical Collections (S). 71 records from Jordal. 3 records from University of Vienna, Institute for Botany - Herbarium WU. 11 records from Database of Vascular Plants of Himalaya. 4 records from Isle of Man wildlife records from 01/01/2000 to 13/02/2017. 217 records from Vascular Plants, Field notes, Agder naturmuseum (KMN). 5 records from IAC - Herb\u00e1rio do Instituto Agron\u00f4mico de Campinas. 568 records from Naturalis Biodiversity Center (NL) - Botany. 3 records from PlutoF platform observations. 2 records from SP - Herb\u00e1rio do Estado \"Maria Eneyda P. Kaufmann Fidalgo\" - Cole\u00e7\u00e3o de Faner\u00f3gamas. 57 records from Plant Specimen from Herbarium (HIB) in China, Wuhan Botanical Garden, Chinese Academy of Sciences. 17 records from Plant Specimen in Yunnan, China from Herbarium (PE),Institute of Botany, Chinese Academy of Sciences. 18 records from SANT Herbarium vascular plants collection. 8 records from Harriet Irving Botanical Gardens (HIBG). 5 records from Species plots from the Norwegian Vegetation Mapping Programme. 1 records from Sistematizaci\u00f3n de la colecci\u00f3n entomol\u00f3gica y actualizaci\u00f3n de la colecci\u00f3n del herbario CHIP del Instituto de Historia Natural y Ecolog\u00eda (IHNE), Chiapas. 316 records from Vascular plants in Denmark recorded under the The Nationwide Monitoring and Assessment Programme for the Aquatic and Terrestrial Environments (NOVANA). 45 records from Karplanter i vernet barskog og edell\u00f8vskog. 10 records from University of Alberta Vascular Plant Herbarium (ALTA-VP). 125 records from Some Plant Specimens from KUN, IBSC, NAS Herbarium in China from 1900 to 1950. 204 records from Plant Specimen from Herbarium (CDBI) in China, Chengdu Institute of Botany, Chinese Academy of Sciences. 845 records from Florabank1 - A grid-based database on vascular plant distribution in the northern part of Belgium (Flanders and the Brussels Capital region). 74 records from RECORD Vascular Plant Data. 100 records from The digitization of plant specimens of NTU. 1 records from Local Wildlife Site Surveys Berkshire. 37 records from Phytochorologie des d\u00e9partements fran\u00e7ais. 107 records from BioFokus. 155 records from Herbier Louis-Marie (QFA) - Collection de plantes vasculaires. 17 records from Vascular plant herbarium, Agder naturmuseum og botaniske hage. 8 records from Cat\u00e1logo electr\u00f3nico de espec\u00edmenes depositados en el Herbario de la Universidad de Texas en Austin, Fase IV. 32 records from Inventaire National du Patrimoine Naturel : CBN Aquitaine-Poitou-Charentes. 105 records from Dutch Foundation for Applied Water Research (STOWA) - Limnodata Neerlandica. 3407 records from Artportalen (Swedish Species Observation System). 135 records from Plant Specimen Database of Tama Forest Science Garden, Forestry and Forest Products Research Institute, Japan. 3 records from Flora of S\u0142owi\u0144ski National Park, Poland. 6 records from MBM - Herb\u00e1rio do Museu Bot\u00e2nico Municipal. 6 records from Stabbetorp - Floristiske registreringer 2016. 6 records from Herbario Museo de La Salle Bogot\u00e1 (BOG). 3 records from Miscellaneous records held on the Cofnod database. 1 records from River Macrophytes Database. 3 records from Gothenburg Herbarium - Types (GBIF:IH:GB:Herbarium). 6 records from Inventaire National du Patrimoine Naturel : Flore du Limousin. 38 records from Oskarshamn herbarium (OHN). 311 records from Donn\u00e9es ONF Faune-Flore-Fonge. 2 records from Tallinn Botanic Garden. 15 records from Norwegian Biodiversity Information Centre - Other datasets. 14 records from Australia's Virtual Herbarium. 467 records from CSIC-Real Jard\u00edn Bot\u00e1nico-Anthos. Sistema de Informaci\u00f3n de las Plantas de Espa\u00f1a. 3 records from Herbier de Strasbourg. 207 records from Vascular Plant Herbarium, UiB. 29 records from DBG Kathryn Kalmbach Herbarium. 27 records from Banco de Germoplasma del Jard\u00edn Bot\u00e1nico Atl\u00e1ntico. 2 records from Hertfordshire Flora Survey Records 1987-2005. 3 records from Natural History Museum Maastricht (NL) - Herbarium. 659 records from Consortium of California Herbaria. 34 records from NRW Regional Data: all taxa (excluding sensitive species), West Wales. 504 records from iNaturalist Research-grade Observations. 17 records from UCBG TAPIR Provider. 1 records from Commissioned surveys and staff surveys and reports for Scottish Wildlife Trust reserves - Unassessed data. 55 records from ARKO strandeng. 68 records from CONN. 2 records from HUCS - Herb\u00e1rio da Universidade de Caxias do Sul. 39 records from Other BSBI Scottish data up to 2012. 21 records from Butler University Friesner Herbarium (BUT). 1 records from Merseyside BioBank Active Naturalists (unverified). 7 records from McGill University Herbarium Database. 59 records from University of Lethbridge Herbarium (LEA). 7 records from LSU Shirley C. Tucker Herbarium at Louisiana State University - Vascular Plants. 16 records from Estonian Museum of Natural History. 1 records from Cat\u00e1logo electr\u00f3nico de espec\u00edmenes depositados en el Herbario de la Universidad de Texas en Austin, Fase IV. 1 records from Collection botanique Le Grand A. (BOUM). 13 records from NINA botanical collection. 4 records from National Trust Species Records. 321 records from UAM Herbarium (ALA), Vascular Plant Collection (Arctos). 10 records from Finnish Floristic Database (Small Collections). 101 records from Estonian University of Life Sciences. 536 records from Plant Specimen from Herbarium (NAS) in China, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences. 1 records from Hochschulgel\u00e4nde (Bremen). 3 records from Fungus Collections at Staatliches Museum f\u00fcr Naturkunde Karlsruhe (Herbarium KR). 2 records from Paul-Gerhardt-Schule Dassel. 1 records from Urwald 3 (Bad Waldsee). 1 records from Warnowtal (Rostock). 1 records from Sudeniederung (Amt Neuhaus). 1 records from Kaltenkirchen Brache. 1 records from Tiere und Pflanzen am Pfannenbach. 1 records from Schulgel\u00e4nde Paul-Gerhardt-Schule. 1 records from VFD-RP: Taunus: Kirchenweide K\u00f6pplers. 1 records from Weinberg Reichersdorf. 19 records from Inventaire National du Patrimoine Naturel : CBN Brest. 1 records from Tag der Artenvielfalt in Heidelberg. 24 records from Herbarium specimens of Soci\u00e9t\u00e9 des Sciences Naturelles et Math\u00e9matiques de Cherbourg (CHE). 1 records from VFD-RP: Taunus: M\u00e4hweide Dehe. 735 records from Occurrence Data of Vascular Plants collected or compiled for the Flora of Bavaria. 2 records from Sammlung altes Gartenherbar Herbarium Hamburgense HBG. 30 records from OAC-BIO Herbarium. 24 records from Yorkshire Wildlife Trust - Non-sensitive records from all taxonomic groups. 7 records from Naturhistorisches Museum Mainz, Feldbeobachtungsdaten Pflanzen. 12 records from SEWBReC Vascular Plants (South East Wales). 331 records from naturgucker. 3 records from Standing Waters Database - Scotland. 1 records from Schulaktion des Dienzenhofer-Gymnasiums. 1 records from Donauinsel des BN bei Entau. 2 records from Vascular Plants Collection of National Museum of Nature and Science. 2428 records from Dutch Vegetation Database (LVD). 1392 records from INPN - Donn\u00e9es flore des CBN agr\u00e9g\u00e9es par la FCBN. 17 records from NZ National Vegetation Survey occurrence data. 7 records from The Fungal Collection at the Senckenberg Museum f\u00fcr Naturkunde G\u00f6rlitz. 19 records from Herbario XAL del Instituto de Ecolog\u00eda, A.C., M\u00e9xico (IE-XAL). 9 records from Herbario IEB del Instituto de Ecolog\u00eda, A.C., M\u00e9xico (IE-BAJ\u00edO). 3 records from CeDoc de Biodiversitat Vegetal: BCN-Seeds. 120 records from Vascular plant specimens of Akita Prefectural Museum. 13 records from Jardin botanique de Montr\u00e9al (JBM). 86 records from FKSE-Herbarium specimens of Faculty of Symbiotic Systems Science, Fukushima University, Japan. 68 records from Royal Botanic Garden Edinburgh Living Plant Collections (E). 170 records from Angiospermatatophytina Collection of Saitama Museum of Natural History. 10 records from Plant (KIWE-PL). 20 records from Plant (JNHM-PL). 1 records from Plant (MNHM-PL). 3 records from Plant (NHMC-PL). 6 records from Plant (GFEI-PL). 42 records from Plant (NSMK-PL). 1 records from Plant (NHMK-PL). 2 records from Herbaria of the University and ETH Z\u00fcrich. 8 records from Tiroler Landesmuseum Ferdinandeum. 12 records from The Vascular Plant Collection at the Botanische Staatssammlung M\u00fcnchen. 70 records from IBF Monitoring of Vascular Plants. 1 records from Inventario flor\u00edstico de los cerros San Mart\u00ed y El Patol en el semidesierto queretano. 1 records from Vascular plant specimens of Iida City Museum. 183 records from Tropicos Specimen Data. 3 records from BRERC species records recorded over 15 years ago. 1 records from Naturhistorisches Museum Mainz, Botanical Collection. 1 records from Botanical Research Intitute of Texas. 24 records from Natural History Museum (London) Collection Specimens. 18 records from Cat\u00e1logo Flor\u00edstico Hist\u00f3rico de Navarra. Gobierno de Navarra. 6 records from Natural History Museum, Vienna - Herbarium W. 384 records from Waarnemingen.be - Non-native plant occurrences in Flanders and the Brussels Capital Region, Belgium. 270 records from NatureServe Network Species Occurrence Data. 3 records from An\u00e1lisis de la heterogeneidad ambiental y conectividad de las \u00e1reas naturales del sur del Valle de M\u00e9xico. 2 records from Base de datos del Herbario de la Unidad Acad\u00e9mica de Agronom\u00eda de la Universidad Aut\u00f3noma de Zacatecas. 5 records from Flora-On: occurrence data of the flora of mainland Portugal. 3 records from An\u00e1lisis de la heterogeneidad ambiental y conectividad de las \u00e1reas naturales del sur del Valle de M\u00e9xico_1. 6 records from Colecci\u00f3n cient\u00edfica del Museo de Historia Natural Alfredo Dug\u00e9s. 3 records from Plant Specimens of Oiso Municipal Museum. 50 records from Plant specimens of Hokkaido University Museum. 20 records from Vascular Plant Collection of Natural History Museum and Institute, Chiba. 127 records from Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan. 11 records from Universidad de Barcelona. Grup dInvestigaci\u00f3 Geobot\u00e1nica i Cartografia de la Vegetaci\u00f3. 2 records from KNWR Herbarium Collection. 11 records from Botanical specimens database of Mr. Jiro Ito collection, Shizuoka Prefecture Museum of Natural History. 7 records from Dataflos. 173 records from Ibaraki Nature Museum, Vascular Plants collection. 4 records from Leiner-Herbar Konstanz. 16 records from Survey and monitoring records for Scottish Wildlife Trust reserves from reserve convenors and Trust volunteers - Unassessed data. 130 records from NMNH Extant Specimen Records. 50 records from The Himalayan Uplands Plant database (HUP Version 1). 5 records from Botanical Garden Collection. 4 records from Korean Ethnobotany Database. 4 records from Factual Database of Native Flora Seeds in Korea. 21 records from Canadian Museum of Nature Herbarium. 253 records from Vascular Plant Collection - University of Washington Herbarium (WTU). 5 records from Fairchild Tropical Botanic Garden Virtual Herbarium Darwin Core format. 74 records from Herbarium (ICEL). 17 records from Herbarium (AMNH). 787 records from Observational database of Icelandic plants. 20 records from Colecci\u00f3n de plantas vasculares del herbario de la Universitat de Val\u00e8ncia (VAL).. 33 records from Herbario de Plantas Vasculares de la Universidad de Salamanca: SALA. 114 records from CSIC-Real Jard\u00edn Bot\u00e1nico-Colecci\u00f3n de Plantas Vasculares (MA). 2 records from Universidad del Pa\u00ed\u00ads Vasco/EHU, Bilbao: Herbario BIO. 20 records from Universidad de Oviedo. Departamento de Biolog\u00eda de Organismos y Sistemas: FCO. 5 records from Herbario EMMA. Herbario de la Escuela T\u00e9cnica Superior de Ingenieros de Montes. UPM. 15 records from Herbario de la Universidad de Sevilla. 3 records from Herbario de la Universidad de Sevilla, SEV-Historico. 3 records from Herbario HSS Finca La Orden-Valdesequera (CICYTEX). Gobierno de Extremadura. 13 records from Institut Botanic de Barcelona, BC. 22 records from Auckland Museum Botany Collection. 6 records from Botanic Garden of the Finnish Museum of Natural History. 9 records from Herbarium of Jyv\u00e4skyl\u00e4 University Museum. 2 records from Plant in Baekdu Mountain (KIDR-PL). 7 records from Royal Botanical Gardens Herbarium. 78 records from New Zealand Virtual Herbarium. 6 records from DAO Herbarium Type Specimens. 2 records from herbario. 1 records from Vascular Plants Collection of National Museum of Nature and Science. 300 records from Plant Specimens of Kurashiki Museum of Natural History. 44 records from Herbarium Specimens of Tokushima Prefectural Museum, Japan. 9 records from Herbarium of Kitakyushu Museum of Natural History and Human History. 288 records from Vascular Plant Collection. 3 records from Arizona State University Vascular Plant Herbarium. 2 records from University of Copenhagen Arboretum. 2 records from Botany registration database by Danish botanists. 36 records from Herbarium Faeroense. 11 records from Botanical Museum, Copenhagen. Database of type specimens. 180 records from DAV UC Davis Center for Plant Diversity. 14 records from Herbarium (UNA). 3 records from MEXU/Tipos de plantas vasculares. 20 records from Actualizaci\u00f3n de las bases de datos del Herbario XAL. Fase III. 1 records from Flora exsiccata Bavarica. 1 records from GEO Biodiversity Day. 50 records from Herbarium Berolinense. 33 records from Staatliches Museum f\u00fcr Naturkunde Stuttgart, Herbarium. 18 records from Observations du Conservatoire botanique national du Bassin parisien.. 1 records from Biologiezentrum Linz. 5 records from Herbarium Senckenbergianum G\u00f6rlitz (GLM). 52 records from United States National Plant Germplasm System Collection. 1 records from The System-wide Information Network for Genetic Resources (SINGER). 2 records from The Erysiphales Collection at the Botanische Staatssammlung M\u00fcnchen. 1 records from The Erysiphales Collection at the University Halle-Wittenberg. 105 records from Nordic Genetic Resources. 40 records from USU-UTC Specimen Database. 7 records from Universidad Polit\u00e9cnica de Madrid, Dpto. Biolog\u00eda Vegetal, Banco de Germoplasma. 4 records from Institut Botanic de Barcelona, BC-Hist\u00f3rico. 3 records from Herbarium de Geo. B. Hinton, M\u00e9xico. 6 records from Plant Specimens of Lake Biwa Museum. 82 records from Angiosperm specimens of Iwate Prefectural Museum. 77 records from Vascular Plants Collection of Sagamihara City Museum. 204 records from Harvard University Herbaria. 5 records from Vascular plants of south-central China. 124 records from Specimen Database of Colorado Vascular Plants. 10 records from Visual Plants (144.41.33.158) - Botanical garden, University of Hohenheim, Germany. 1 records from Herbarium BSG Vascular Plants. 3 records from inatura - Erlebnis Naturschau Dornbirn. 2 records from Inventaire National du Patrimoine Naturel : Programme national esp\u00e8ces v\u00e9g\u00e9tales de la Directive Habitat. 109 records from EURISCO, The European Genetic Resources Search Catalogue. 184 records from Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Prefecture, Japan. 7 records from Plant Specimens of Taga Town Museum, Shiga Pref., Japan. 259 records from Plant specimens depodited in Osaka Museum of Natural History, Japan.. 39 records from Kochi Prefectural Makino Botanical Garden. 20 records from Plant Specimens of The Shimane Nature Museum of Mt. Sanbe. 2 records from PlantBank Records. 1 records from SER Site-based Surveys. 2 records from Biodiversit\u00e4tsdatenbank des Landes Salzburg. 2 records from Repatriaci\u00f3n de datos del Herbario de Arizona (ARIZ). 2 records from Vascular Plants, Observations, Oslo (O). 25 records from Oklahoma Vascular Plants Database Provider. 1 records from Schlichemquelle (Tieringen/Me\u00dfstetten). 1 records from Zuk\u00fcnftiges NSG H\u00f6ftland/Bockholmwik. 1 records from NSG H\u00fclenbuch H\u00f6rnle (Tieringen/Me\u00dfstetten). 1 records from Neckartals\u00fcdhang (Horb). 1 records from GEO-Hauptveranstaltung (Insel Vilm). 1 records from BUND - Dassower See (L\u00fcbeck/Dassow). 1 records from Sudeniederung (Amt Neuhaus), Landkreis L\u00fcneburg. 1 records from 20 Jahre Naturschutzgebiet Dreienberg. 1 records from Heinersdorfer Sumpfwiese. 1 records from Wismar Bucht coast-watching. 1 records from Stadtgebiet (Dannenberg). 1 records from Bergkamen- Bergehalde Gro\u00dfes Holz. 1 records from Tiergarten Straubing. 1 records from Wupperaue bei Kemna (Wuppertal). 2 records from Naturerlebnisraum Koppelsberg. 126 records from Plantae, TAIF (Taiwan e-Learning and Digital Archives Program, TELDAP). 775 records from Atlas Flora Danica. 18 records from Scottish SNH-funded BSBI records. 18 records from Herbarium of Namur. 35 records from Natural History Museum, University of Tartu. 19 records from Herbarium of Ume\u00e5 University (UME). 86 records from Base de datos de plantas vasculares del Pa\u00eds Vasco: ARAN-EH. 31 records from Field Museum of Natural History (Botany) Seed Plant Collection. 10 records from NRW Regional Data: North Wales. 41 records from MPM Milwaukee Public Museum Herbarium. 8 records from Polish gene bank \u2013 passport data of plants accessions which are important in human life. 3 records from Belgian IFBL Flora Checklists (1939-1971). 59 records from Inventaire National du Patrimoine Naturel : Flore Franco-Belge. 1 records from Sp\u00e9cimens d'herbiers de G. Fenoul (FEN). 1 records from Westerw\u00e4lder Umwelt- und Naturschutztag an der Fuchskaute im Westerwald. 1 records from Auenwiesen und Trockenrasen. 73 records from Colorado State University Herbarium. 15 records from EKY_Darwincore. 16 records from MISS_DC_01MAR2006. 37 records from NCSU_Darwincore. 73 records from R. L. McGregor Herbarium Vascular Plants Collection. 1 records from Herbario de la Universidad P\u00fablica de Navarra, Pamplona: UPNA-H. 629 records from Vascular Plant Specimen Database of Kanagawa Prefectural Museum of Natural History. 160 records from Gunma Museum of Natural History, Vascular Plant Specimen. 1273 records from Plant. 1 records from Jard\u00edn Bot\u00e1nico Atl\u00e1ntico, Gij\u00f3n: JBAG. 2 records from MGC Herbarium of University of Malaga (Spain): MGC-Cormof dataset. 11 records from Biological and palaeontological collection and observation data MNHNL. 64 records from Botany Division, Yale Peabody Museum. 1 records from VFD-RP, Taunus: Bergweide Dehe. 10 records from Herbarium Senckenbergianum (FR). 19 records from Universidad de Oviedo. Departamento de Biolog\u00eda de Organismos y Sistemas: FCO-Briof. 52 records from Database of Native Plants in Taiwan. 4 records from Flora (vascular) y fauna (aves) de los Parques Nacionales del estado de Baja California: Constituci\u00f3n de 1857 y Sierra San Pedro M\u00e1rtir. 8 records from Plant of Folklore (KIDR-PL). 38 records from Herbarium of Taiwan Forestry Research Institute. 11 records from Herbarium specimens of the Mus\u00e9um d'Histoire Naturelle of Aix-en-Provence (AIX). 9 records from Etapa final de la captura y catalogaci\u00f3n del Herbario del Instituto de Ecolog\u00eda, AC, Centro Regional del Baj\u00edo. 4 records from Plant - Seed (KIDR-PL). 5 records from Banco de datos flor\u00edsticos del Herbario CHAP. 25 records from Monitoring records of plant species in the Hakone region of Fuji-Hakone-Izu National Park, Japan, 2001-2010. 1 records from WII Herbarium Dataset. 24 records from National vegetation diversity inventory and mapping plan. 13 records from VIT Herbarium - Vascular Plants (The Natural History Museum of Alava). 1 records from Vascular Herbarium, NMBU. 67 records from National Wetland Inventory (NV). 1002 records from FloraCAT: Banco de datos de los corm\u00f3fitos de Catalu\u00f1a. 1 records from Herbarium specimens, Harmas J.H. Fabre (FABR - S\u00e9rignan-du-Comtat) of the Mus\u00e9um national d'Histoire naturelle (MNHN - Paris). 1329 records from Flora d'Andorra. 4 records from National System of Protected Areas in Poland - Plants. 4 records from Rotherham Biological Records Centre - Non-sensitive Records from all taxonomic groups. 1 records from ArtenFinder. 262 records from Lund Botanical Museum (LD). 48 records from Natural Resources Wales Regional Data : Mid-Wales. 3 records from VegetWeb - Repositorium von Vegetationsaufnahmen a. 2 records from University of South Florida Herbarium (USF). 13 records from Plant Specimen from Herbarium (LBG) in China, Lushan Botanical Garden, Jiangxi and Chinese Academy of Sciences. 1530 records from Norwegian Species Observation Service. 5 records from Vascular Plants, Museum of Archaeology, University of Stavanger. 37 records from Plant Specimen from Herbarium (IBK) in China, Guangxi Institute of Botany, Chinese Academy of Sciences. 1349 records from The vascular plants collection (P) at the Herbarium of the Mus\u00e9um national d'Histoire Naturelle (MNHN - Paris). 12 records from LERN Records. 5 records from SBT-Living. 87 records from Hatikka Observation Database. 2 records from The Vascular Plants Collection of the University of Goettingen. 1 records from University of Florida Herbarium (FLAS). 12 records from Bernice P. Bishop Museum. 35 records from Carnet en Ligne. 3 records from ENDEMIC SPECIES RESEARCH INSTITUTE\uff08Herbarium\uff09. 11 records from Seed collection \u2013 Dead seeds for evaluation and observation purposes. 8 records from ARKO kulturmarkseng. 102 records from Royal Botanic Garden Edinburgh Herbarium (E). 1 records from All observations extracted from the Flora of Northumberland and Durham 1831. 121 records from Waarnemingen.be - Plant occurrences in Flanders and the Brussels Capital Region, Belgium. 52 records from Michigan State University Herbarium Vascular Plants. 2 records from Estudio flor\u00edstico de la Sierra de Pachuca, Hidalgo, M\u00e9xico. 250 records from Botany (UPS). 6 records from Museu de Ci\u00e8ncies Naturals de Barcelona: BGJBB. 17 records from Merseyside BioBank (verified). 2 records from Type herbarium, G\u00f6ttingen (GOET). 39 records from Herbier du Qu\u00e9bec (QUE) - Collection de plantes vasculaires. 51 records from Herbarium Specimens of Bonin and Ryukyu Islands. 5 records from Flora of Worcestershire. 7 records from Computarizaci\u00f3n del Herbario ENCB. Fase I (Base de datos de los ejemplares del Valle de M\u00e9xico). 4 records from University of British Columbia Botanical Garden Collections (UBCBG). 3 records from PlutoF platform reference-based occurrences. 54 records from Herbarium specimens of Universit\u00e9 de Montpellier 2, Institut de Botanique (MPU)). 937 records from Finnish Floristic Database (Literature Sources). 1 records from Base de datos computarizada del herbario CIB, Instituto de Investigaciones Biol\u00f3gicas, Universidad Veracruzana. 3 records from Institut Menorqu\u00ed d'Estudis. Colecci\u00f3n Hist\u00f3rica de Rodr\u00edguez Femen\u00edas, Herbarium Generale Minoricae: HGM-Femenias. 50 records from Royal Botanic Gardens, Kew - Herbarium Specimens. 3 records from Verneplan Hjerkinn karplanter. 128 records from Vascular plant herbarium, Troms\u00f8 Museum. 178 records from Vascular plant herbarium, NTNU University Museum. 311 records from Donn\u00e9es ONF Faune-Flore-FOnge. 96 records from Institute of Ecology and Evolutionary Biology, National Taiwan University. 1563 records from Vascular Plants, Field notes, Oslo (O). 211 records from The New York Botanical Garden Herbarium (NY) - Vascular Plant Collection. 822 records from Sistema de Informaci\u00f3n de la vegetaci\u00f3n Ib\u00e9rica y Macaron\u00e9sica. 12 records from Distribution of Higher Plants in Greater Manchester. 283 records from Vegetation data from protected areas in Denmark (\u00a7 3 in the Danish Nature Protection Act). 311 records from Donn\u00e9es ONF Faune-Flore-FOnge. 2 records from Wilson Botanical Garden - Las Cruces Biological Station. 25 records from Ecofact. 11 records from Green Plant Herbarium (TRT). 7 records from Inventaire National du Patrimoine Naturel : Flore du Massif Armoricain. 121 records from Gothenburg Herbarium - General (GBIF:IH:GB:Herbarium). 3 records from Plant Observation Records of Japan. 645 records from Floristic Databases of Mecklenburg-Pomerania - Higher Plants. 40 records from Herbarium specimens of Herbiers Universitaires de Clermont-Ferrand (CLF). 39 records from Allan Herbarium (CHR). 1 records from IRAI - Herb\u00e1rio do Parque da Ci\u00eancia Newton Freire Maia. 90 records from SysTax - Botanical Gardens. 1 records from Herbarium specimens of CBNA (GAP). 2 records from Korean Peninsula Flora. 1 records from Gipuzkoako Foru Aldundiaren Landareen Germoplama Bankua / Banco de Germoplasma Vegetal de la Diputaci\u00f3n Foral de Gipuzkoa. 1 records from CZE National PGR Inventory. 13 records from Tracheophyta collection of Biodiversity Center of Japan, Ministry of Environment. 2 records from Digitization of plant specimens from Rhoen and Vogelsberg (FULD). 356 records from Vascular Plant Herbarium, Oslo (O). 5 records from Herbarium specimens of Jardins botaniques and Conservatoire Botanique of Nancy (NCY). 2 records from Natural History Museum Rotterdam (NL) - Plantae collection. 3 records from Environmental Monitoring Database Species data 1987 to 2015. 2429 records from Flora von Deutschland (Phanerogamen). 5 records from Suffolk Biodiversity Information Service (SBIS) Dataset. 3 records from WTSWW Data: All Taxa (West Wales). 38 records from E. C. Smith Herbarium (ACAD). 1 records from Propuesta para sistematizar la colecci\u00f3n palinol\u00f3gica de polen reciente y f\u00f3sil del IGLUNAM. 21 records from BUT Friesner Herbarium. 2 records from Natagriwal ; Observations made from operations within Natura 2000 habitats and other semi-natural areas. 1 records from Sistematizaci\u00f3n del Herbario Nacional Forestal Bi\u00f3l Luciano Vela G\u00e1lvez. 1 records from SWECO. 5 records from Herbario de Plantas Vasculares de la Asociaci\u00f3n BIGA para el estudio del patrimonio natural de Galicia: FBIGA. 2 records from Herbarium Erlangense. 1 records from Fusi\u00f3n y actualizaci\u00f3n de las bases de datos del Herbario de la Facultad de Ciencias, UNAM (FCME), Guerrero. 2 records from National Trust for Scotland Species Records. 516 records from Vascular plant field notes, NTNU University Museum. 1 records from Vascular plants in Danish coastal meadows. 2768 records from Finnish Floristic Database (Finnish Museum of Natural History Collections). 25 records from Geneva Herbarium \u2013 General Collection (G). 3 records from Welsh BSBI data (ex-VPDB dataset) at hectad resolution. 3 records from Nijmegen Natural History Museum (NL) - Herbarium. 5 records from BRERC species records within last 15 years. 130 records from Some Plant Specimens from PE Herbarium in China from 1900 to 1950. 115 records from CAS Botany (BOT). 1 records from University of Graz, Institute of Plant Sciences - Herbarium GZU. 3 records from National Museum of Natural Science. 2 records from Herbarium specimens of Limoges university (LIMO). 4 records from PACA-AGP - Herbarium Anchieta. 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"name": "Henrik", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Ohman, Henrik"}, {"surname": "Oide", "name": "Hideyuki", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Oide, Hideyuki"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Oleiro Seabra", "name": "Luis Filipe", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Oleiro Seabra, Luis Filipe"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onogi", "name": "Kouta", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Onogi, Kouta"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oppen", "name": "Henrik", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oppen, Henrik"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Otono", "name": "Hidetoshi", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Otono, Hidetoshi"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Oussoren", "name": "Koen Pieter", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Oussoren, Koen Pieter"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Rhys Edward", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Owen, Rhys Edward"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Pacheco Rodriguez", "name": "Laura", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Pacheco Rodriguez, Laura"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganini", "name": "Michela", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Paganini, Michela"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Palazzo", "name": "Serena", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Palazzo, Serena"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Palka", "name": "Marek", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Palka, Marek"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panagoulias", "name": "Ilias", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Panagoulias, Ilias"}, {"surname": "Pandini", "name": "Carlo Enrico", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pandini, Carlo Enrico"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Paolozzi", "name": "Lorenzo", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paolozzi, Lorenzo"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Parker", "name": "Adam Jackson", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Parker, Adam Jackson"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parker", "name": "Kerry Ann", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Parker, Kerry Ann"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pascuzzi", "name": "Vincent", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pascuzzi, Vincent"}, {"surname": "Pasner", "name": "Jacob Martin", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Pasner, Jacob Martin"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearson", "name": "Benjamin", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Pearson, Benjamin"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedro", "name": "Rute", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Pedro, Rute"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Penc", "name": "Ondrej", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Penc, Ondrej"}, {"surname": "Peng", "name": "Cong", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Peng, Cong"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Peralva", "name": "Bernardo", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Peralva, Bernardo"}, {"surname": "Perego", "name": "Marta Maria", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Perego, Marta Maria"}, {"surname": "Perepelitsa", "name": "Dennis", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Perepelitsa, Dennis"}, {"surname": "Peri", "name": "Francesco", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Peri, Francesco"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrella", "name": "Sabrina", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Perrella, Sabrina"}, {"surname": "Peschke", "name": "Richard", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Peschke, Richard"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Petridis, Andreas"}, {"surname": "Petridou", "name": "Chariclia", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Petridou, Chariclia"}, {"surname": "Petroff", "name": "Pierre", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Petroff, Pierre"}, {"surname": "Petrolo", "name": "Emilio", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Petrolo, Emilio"}, {"surname": "Petrov", "name": "Mariyan", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Petrov, Mariyan"}, {"surname": "Petrucci", "name": "Fabrizio", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Petrucci, Fabrizio"}, {"surname": "Pettersson", "name": "Nora Emilia", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Pettersson, Nora Emilia"}, {"surname": "Peyaud", "name": "Alan", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Peyaud, Alan"}, {"surname": "Pezoa", "name": "Raquel", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pezoa, Raquel"}, {"surname": "Phillips", "name": "Forrest Hays", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Phillips, Forrest Hays"}, {"surname": "Phillips", "name": "Peter William", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Pickering", "name": "Mark Andrew", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Pickering, Mark Andrew"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pilcher", "name": "James", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Pilcher, James"}, {"surname": "Pilkington", "name": "Andrew", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Pilkington, Andrew"}, {"surname": "Pin", "name": "Arnaud Willy J.", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Pin, Arnaud Willy J"}, {"surname": "Pinamonti", "name": "Michele", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Pinamonti, Michele"}, {"surname": "Pinfold", "name": "James", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Pinfold, James"}, {"surname": "Pirumov", "name": "Hayk", "pid": [], "rank": 1988, "affiliation": [], "fullname": "Pirumov, Hayk"}, {"surname": "Pitt", "name": "Michael", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Pitt, Michael"}, {"surname": "Plazak", "name": "Lukas", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Plazak, Lukas"}, {"surname": "Pleier", "name": "Marc-Andre", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Pleier, Marc-Andre"}, {"surname": "Pleskot", "name": "Vojtech", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Pleskot, Vojtech"}, {"surname": "Plotnikova", "name": "Elena", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Plotnikova, Elena"}, {"surname": "Pluth", "name": "Daniel", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Pluth, Daniel"}, {"surname": "Podberezko", "name": "Pavel", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Podberezko, Pavel"}, {"surname": "Poettgen", "name": "Ruth", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Poettgen, Ruth"}, {"surname": "Poggi", "name": "Riccardo", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Poggi, Riccardo"}, {"surname": "Poggioli", "name": "Luc", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Poggioli, Luc"}, {"surname": "Pohl", "name": "David-Leon", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Pohl, David-Leon"}, {"surname": "Polesello", "name": "Giacomo", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Polesello, Giacomo"}, {"surname": "Poley", "name": "Anne-Luise", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Poley, Anne-Luise"}, {"surname": "Policicchio", "name": "Antonio", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Policicchio, Antonio"}, {"surname": "Polifka", "name": "Richard", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Polifka, Richard"}, {"surname": "Polini", "name": "Alessandro", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Polini, Alessandro"}, {"surname": "Pollard", "name": "Christopher Samuel", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Pollard, Christopher Samuel"}, {"surname": "Polychronakos", "name": "Venetios", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Polychronakos, Venetios"}, {"surname": "Pomme\u0300s", "name": "Kathy", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Pomm\u00e8s, Kathy"}, {"surname": "Ponomarenko", "name": "Daniil", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Ponomarenko, Daniil"}, {"surname": "Pontecorvo", "name": "Ludovico", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Pontecorvo, Ludovico"}, {"surname": "Popeneciu", "name": "Gabriel Alexandru", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Popeneciu, Gabriel Alexandru"}, {"surname": "Poppleton", "name": "Alan", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Poppleton, Alan"}, {"surname": "Pospisil", "name": "Stanislav", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Pospisil, Stanislav"}, {"surname": "Potamianos", "name": "Karolos", "pid": [], "rank": 2013, "affiliation": [], "fullname": "Potamianos, Karolos"}, {"surname": "Potrap", "name": "Igor", "pid": [], "rank": 2014, "affiliation": [], "fullname": "Potrap, Igor"}, {"surname": "Potter", "name": "Christina", "pid": [], "rank": 2015, "affiliation": [], "fullname": "Potter, Christina"}, {"surname": "Poulard", "name": "Gilbert", "pid": [], "rank": 2016, "affiliation": [], "fullname": "Poulard, Gilbert"}, {"surname": "Poulsen", "name": "Trine", "pid": [], "rank": 2017, "affiliation": [], "fullname": "Poulsen, Trine"}, {"surname": "Poveda", "name": "Joaquin", "pid": [], "rank": 2018, "affiliation": [], "fullname": "Poveda, Joaquin"}, {"surname": "Pozo Astigarraga", "name": "Mikel Eukeni", "pid": [], "rank": 2019, "affiliation": [], "fullname": "Pozo Astigarraga, Mikel Eukeni"}, {"surname": "Pralavorio", "name": "Pascal", "pid": [], "rank": 2020, "affiliation": [], "fullname": "Pralavorio, Pascal"}, 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[], "rank": 1822, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1823, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1824, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neumann", "name": "Manuel", "pid": [], "rank": 1825, "affiliation": [], "fullname": "Neumann, Manuel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1826, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Ng", "name": "Tsz Yu", "pid": [], "rank": 1827, "affiliation": [], "fullname": "Ng, Tsz Yu"}, {"surname": "Nguyen Manh", "name": "Tuan", "pid": [], "rank": 1828, "affiliation": [], "fullname": "Nguyen Manh, Tuan"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1829, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1830, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1831, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1832, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1833, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1834, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Jon Kerr", "pid": [], "rank": 1835, "affiliation": [], "fullname": "Nilsen, Jon Kerr"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1836, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1837, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishu", "name": "Nishu", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Nishu, Nishu"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nitsche", "name": "Isabel", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Nitsche, Isabel"}, {"surname": "Nitta", "name": "Tatsumi", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Nitta, Tatsumi"}, {"surname": "Nobe", "name": "Takuya", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Nobe, Takuya"}, {"surname": "Noguchi", "name": "Yohei", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Noguchi, Yohei"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nomura", "name": "Marcelo Ayumu", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Nomura, Marcelo Ayumu"}, {"surname": "Nooney", "name": "Tamsin", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Nooney, Tamsin"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Norjoharuddeen", "name": "Nurfikri", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Norjoharuddeen, Nurfikri"}, {"surname": "Novgorodova", "name": "Olga", "pid": [], "rank": 1851, "affiliation": [], "fullname": "Novgorodova, Olga"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1852, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozka", "name": "Libor", "pid": [], "rank": 1853, "affiliation": [], "fullname": "Nozka, Libor"}, {"surname": "Ntekas", "name": "Konstantinos", "pid": [], "rank": 1854, "affiliation": [], "fullname": "Ntekas, Konstantinos"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nuti", "name": "Francesco", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Nuti, Francesco"}, {"surname": "O Connor", "name": "Kelsey", "pid": [], "rank": 1857, "affiliation": [], "fullname": "O'connor, Kelsey"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1858, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Rourke", "name": "Abigail Alexandra", "pid": [], "rank": 1859, "affiliation": [], "fullname": "O'Rourke, Abigail Alexandra"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1860, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1862, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Obermann", "name": "Theresa", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Obermann, Theresa"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Ochoa", "name": "Ines", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Ochoa, Ines"}, {"surname": "Ochoa-Ricoux", "name": "Juan Pedro", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Ochoa-Ricoux, Juan Pedro"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohman", "name": "Henrik", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Ohman, Henrik"}, {"surname": "Oide", "name": "Hideyuki", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Oide, Hideyuki"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Oleiro Seabra", "name": "Luis Filipe", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Oleiro Seabra, Luis Filipe"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onogi", "name": "Kouta", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Onogi, Kouta"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oppen", "name": "Henrik", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oppen, Henrik"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Otono", "name": "Hidetoshi", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Otono, Hidetoshi"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Oussoren", "name": "Koen Pieter", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Oussoren, Koen Pieter"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Rhys Edward", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Owen, Rhys Edward"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Pacheco Rodriguez", "name": "Laura", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Pacheco Rodriguez, Laura"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganini", "name": "Michela", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Paganini, Michela"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Palazzo", "name": "Serena", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Palazzo, Serena"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Palka", "name": "Marek", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Palka, Marek"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panagoulias", "name": "Ilias", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Panagoulias, Ilias"}, {"surname": "Pandini", "name": "Carlo Enrico", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pandini, Carlo Enrico"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Paolozzi", "name": "Lorenzo", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paolozzi, Lorenzo"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Parker", "name": "Adam Jackson", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Parker, Adam Jackson"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parker", "name": "Kerry Ann", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Parker, Kerry Ann"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pascuzzi", "name": "Vincent", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pascuzzi, Vincent"}, {"surname": "Pasner", "name": "Jacob Martin", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Pasner, Jacob Martin"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearson", "name": "Benjamin", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Pearson, Benjamin"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedro", "name": "Rute", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Pedro, Rute"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Penc", "name": "Ondrej", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Penc, Ondrej"}, {"surname": "Peng", "name": "Cong", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Peng, Cong"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Peralva", "name": "Bernardo", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Peralva, Bernardo"}, {"surname": "Perego", "name": "Marta Maria", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Perego, Marta Maria"}, {"surname": "Perepelitsa", "name": "Dennis", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Perepelitsa, Dennis"}, {"surname": "Peri", "name": "Francesco", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Peri, Francesco"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrella", "name": "Sabrina", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Perrella, Sabrina"}, {"surname": "Peschke", "name": "Richard", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Peschke, Richard"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Petridis, Andreas"}, {"surname": "Petridou", "name": "Chariclia", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Petridou, Chariclia"}, {"surname": "Petroff", "name": "Pierre", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Petroff, Pierre"}, {"surname": "Petrolo", "name": "Emilio", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Petrolo, Emilio"}, {"surname": "Petrov", "name": "Mariyan", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Petrov, Mariyan"}, {"surname": "Petrucci", "name": "Fabrizio", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Petrucci, Fabrizio"}, {"surname": "Pettersson", "name": "Nora Emilia", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Pettersson, Nora Emilia"}, {"surname": "Peyaud", "name": "Alan", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Peyaud, Alan"}, {"surname": "Pezoa", "name": "Raquel", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pezoa, Raquel"}, {"surname": "Phillips", "name": "Forrest Hays", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Phillips, Forrest Hays"}, {"surname": "Phillips", "name": "Peter William", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Pickering", "name": "Mark Andrew", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Pickering, Mark Andrew"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pilcher", "name": "James", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Pilcher, James"}, {"surname": "Pilkington", "name": "Andrew", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Pilkington, Andrew"}, {"surname": "Pin", "name": "Arnaud Willy J.", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Pin, Arnaud Willy J"}, {"surname": "Pinamonti", "name": "Michele", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Pinamonti, Michele"}, {"surname": "Pinfold", "name": "James", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Pinfold, James"}, {"surname": "Pirumov", "name": "Hayk", "pid": 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[], "rank": 1822, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1823, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1824, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neumann", "name": "Manuel", "pid": [], "rank": 1825, "affiliation": [], "fullname": "Neumann, Manuel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1826, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Ng", "name": "Tsz Yu", "pid": [], "rank": 1827, "affiliation": [], "fullname": "Ng, Tsz Yu"}, {"surname": "Nguyen Manh", "name": "Tuan", "pid": [], "rank": 1828, "affiliation": [], "fullname": "Nguyen Manh, Tuan"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1829, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1830, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1831, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1832, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1833, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1834, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Jon Kerr", "pid": [], "rank": 1835, "affiliation": [], "fullname": "Nilsen, Jon Kerr"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1836, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1837, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishu", "name": "Nishu", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Nishu, Nishu"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nitsche", "name": "Isabel", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Nitsche, Isabel"}, {"surname": "Nitta", "name": "Tatsumi", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Nitta, Tatsumi"}, {"surname": "Nobe", "name": "Takuya", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Nobe, Takuya"}, {"surname": "Noguchi", "name": "Yohei", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Noguchi, Yohei"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nomura", "name": "Marcelo Ayumu", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Nomura, Marcelo Ayumu"}, {"surname": "Nooney", "name": "Tamsin", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Nooney, Tamsin"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Norjoharuddeen", "name": "Nurfikri", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Norjoharuddeen, Nurfikri"}, {"surname": "Novgorodova", "name": "Olga", "pid": [], "rank": 1851, "affiliation": [], "fullname": "Novgorodova, Olga"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1852, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozka", "name": "Libor", "pid": [], "rank": 1853, "affiliation": [], "fullname": "Nozka, Libor"}, {"surname": "Ntekas", "name": "Konstantinos", "pid": [], "rank": 1854, "affiliation": [], "fullname": "Ntekas, Konstantinos"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nuti", "name": "Francesco", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Nuti, Francesco"}, {"surname": "O Connor", "name": "Kelsey", "pid": [], "rank": 1857, "affiliation": [], "fullname": "O'connor, Kelsey"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1858, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Rourke", "name": "Abigail Alexandra", "pid": [], "rank": 1859, "affiliation": [], "fullname": "O'Rourke, Abigail Alexandra"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1860, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1862, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Obermann", "name": "Theresa", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Obermann, Theresa"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Ochoa", "name": "Ines", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Ochoa, Ines"}, {"surname": "Ochoa-Ricoux", "name": "Juan Pedro", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Ochoa-Ricoux, Juan Pedro"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohman", "name": "Henrik", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Ohman, Henrik"}, {"surname": "Oide", "name": "Hideyuki", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Oide, Hideyuki"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Oleiro Seabra", "name": "Luis Filipe", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Oleiro Seabra, Luis Filipe"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onogi", "name": "Kouta", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Onogi, Kouta"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oppen", "name": "Henrik", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oppen, Henrik"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Otono", "name": "Hidetoshi", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Otono, Hidetoshi"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Oussoren", "name": "Koen Pieter", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Oussoren, Koen Pieter"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Rhys Edward", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Owen, Rhys Edward"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Pacheco Rodriguez", "name": "Laura", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Pacheco Rodriguez, Laura"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganini", "name": "Michela", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Paganini, Michela"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Palazzo", "name": "Serena", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Palazzo, Serena"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Palka", "name": "Marek", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Palka, Marek"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panagoulias", "name": "Ilias", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Panagoulias, Ilias"}, {"surname": "Pandini", "name": "Carlo Enrico", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pandini, Carlo Enrico"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Paolozzi", "name": "Lorenzo", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paolozzi, Lorenzo"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Parker", "name": "Adam Jackson", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Parker, Adam Jackson"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parker", "name": "Kerry Ann", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Parker, Kerry Ann"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pascuzzi", "name": "Vincent", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pascuzzi, Vincent"}, {"surname": "Pasner", "name": "Jacob Martin", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Pasner, Jacob Martin"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearson", "name": "Benjamin", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Pearson, Benjamin"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedro", "name": "Rute", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Pedro, Rute"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Penc", "name": "Ondrej", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Penc, Ondrej"}, {"surname": "Peng", "name": "Cong", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Peng, Cong"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Peralva", "name": "Bernardo", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Peralva, Bernardo"}, {"surname": "Perego", "name": "Marta Maria", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Perego, Marta Maria"}, {"surname": "Perepelitsa", "name": "Dennis", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Perepelitsa, Dennis"}, {"surname": "Peri", "name": "Francesco", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Peri, Francesco"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrella", "name": "Sabrina", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Perrella, Sabrina"}, {"surname": "Peschke", "name": "Richard", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Peschke, Richard"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Petridis, Andreas"}, {"surname": "Petridou", "name": "Chariclia", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Petridou, Chariclia"}, {"surname": "Petroff", "name": "Pierre", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Petroff, Pierre"}, {"surname": "Petrolo", "name": "Emilio", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Petrolo, Emilio"}, {"surname": "Petrov", "name": "Mariyan", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Petrov, Mariyan"}, {"surname": "Petrucci", "name": "Fabrizio", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Petrucci, Fabrizio"}, {"surname": "Pettersson", "name": "Nora Emilia", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Pettersson, Nora Emilia"}, {"surname": "Peyaud", "name": "Alan", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Peyaud, Alan"}, {"surname": "Pezoa", "name": "Raquel", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pezoa, Raquel"}, {"surname": "Phillips", "name": "Forrest Hays", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Phillips, Forrest Hays"}, {"surname": "Phillips", "name": "Peter William", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Pickering", "name": "Mark Andrew", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Pickering, Mark Andrew"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pilcher", "name": "James", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Pilcher, James"}, {"surname": "Pilkington", "name": "Andrew", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Pilkington, Andrew"}, {"surname": "Pin", "name": "Arnaud Willy J.", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Pin, Arnaud Willy J"}, {"surname": "Pinamonti", "name": "Michele", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Pinamonti, Michele"}, {"surname": "Pinfold", "name": "James", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Pinfold, James"}, {"surname": "Pirumov", "name": "Hayk", "pid": 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We have satellite images of disaster stricken areas such as refugee camps taken\u00a0at different times. We want to analyse or compare these images to see the progress of disaster relief operations or to measure level of severity in that particular area over a period of time. For example, if we have satellite images of refugee camps, we want to count shelters to see\u00a0if the number is\u00a0increasing or decreasing. In these days, UNOSAT has\u00a0staff dedicated to analyse and then classify objects in these images manually. This is an arduous task, takes a lot of time, inhibiting quick reaction from relief organizations.

\n\n

Conventionally, objects in images are identified by using color or shape features. But in our case, all objects such as shelters are arbitrary in shapes and color. Sometimes the background surface has the same color as the shelter. So, it is not possible to employ any conventional color or shape based image segmentation method.

\n\n

The solution we are proposing is \"Automated Feature Classification using Machine Learning\". My team at CERN openlab with UNOSAT are evaluating different machine learning based feature extraction algorithms.\u00a0Currently, we have evaluated Facebook's\u00a0DeepMask\u00a0and\u00a0SharpMask\u00a0object proposal techniques.

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"Neep", "name": "Thomas James", "pid": [], "rank": 1814, "affiliation": [], "fullname": "Neep, Thomas James"}, {"surname": "Negri", "name": "Andrea", "pid": [], "rank": 1815, "affiliation": [], "fullname": "Negri, Andrea"}, {"surname": "Negrini", "name": "Matteo", "pid": [], "rank": 1816, "affiliation": [], "fullname": "Negrini, Matteo"}, {"surname": "Nektarijevic", "name": "Snezana", "pid": [], "rank": 1817, "affiliation": [], "fullname": "Nektarijevic, Snezana"}, {"surname": "Nellist", "name": "Clara", "pid": [], "rank": 1818, "affiliation": [], "fullname": "Nellist, Clara"}, {"surname": "Nelson", "name": "Andrew", "pid": [], "rank": 1819, "affiliation": [], "fullname": "Nelson, Andrew"}, {"surname": "Nelson", "name": "Michael Edward", "pid": [], "rank": 1820, "affiliation": [], "fullname": "Nelson, Michael Edward"}, {"surname": "Nemecek", "name": "Stanislav", "pid": [], "rank": 1821, "affiliation": [], "fullname": "Nemecek, Stanislav"}, {"surname": "Nemethy", "name": "Peter", "pid": [], "rank": 1822, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1823, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1824, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neumann", "name": "Manuel", "pid": [], "rank": 1825, "affiliation": [], "fullname": "Neumann, Manuel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1826, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Ng", "name": "Tsz Yu", "pid": [], "rank": 1827, "affiliation": [], "fullname": "Ng, Tsz Yu"}, {"surname": "Nguyen Manh", "name": "Tuan", "pid": [], "rank": 1828, "affiliation": [], "fullname": "Nguyen Manh, Tuan"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1829, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1830, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1831, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1832, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1833, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1834, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Jon Kerr", "pid": [], "rank": 1835, "affiliation": [], "fullname": "Nilsen, Jon Kerr"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1836, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1837, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishu", "name": "Nishu", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Nishu, Nishu"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nitsche", "name": "Isabel", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Nitsche, Isabel"}, {"surname": "Nitta", "name": "Tatsumi", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Nitta, Tatsumi"}, {"surname": "Nobe", "name": "Takuya", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Nobe, Takuya"}, {"surname": "Noguchi", "name": "Yohei", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Noguchi, Yohei"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nomura", "name": "Marcelo Ayumu", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Nomura, Marcelo Ayumu"}, {"surname": "Nooney", "name": "Tamsin", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Nooney, Tamsin"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Norjoharuddeen", "name": "Nurfikri", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Norjoharuddeen, Nurfikri"}, {"surname": "Novgorodova", "name": "Olga", "pid": [], "rank": 1851, "affiliation": [], "fullname": "Novgorodova, Olga"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1852, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozka", "name": "Libor", "pid": [], "rank": 1853, "affiliation": [], "fullname": "Nozka, Libor"}, {"surname": "Ntekas", "name": "Konstantinos", "pid": [], "rank": 1854, "affiliation": [], "fullname": "Ntekas, Konstantinos"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nuti", "name": "Francesco", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Nuti, Francesco"}, {"surname": "O Connor", "name": "Kelsey", "pid": [], "rank": 1857, "affiliation": [], "fullname": "O'connor, Kelsey"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1858, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Rourke", "name": "Abigail Alexandra", "pid": [], "rank": 1859, "affiliation": [], "fullname": "O'Rourke, Abigail Alexandra"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1860, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1862, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Obermann", "name": "Theresa", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Obermann, Theresa"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Ochoa", "name": "Ines", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Ochoa, Ines"}, {"surname": "Ochoa-Ricoux", "name": "Juan Pedro", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Ochoa-Ricoux, Juan Pedro"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohman", "name": "Henrik", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Ohman, Henrik"}, {"surname": "Oide", "name": "Hideyuki", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Oide, Hideyuki"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olariu", "name": "Albert", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Olariu, Albert"}, {"surname": "Oleiro Seabra", "name": "Luis Filipe", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Oleiro Seabra, Luis Filipe"}, {"surname": "Olivares Pino", "name": "Sebastian Andres", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Olivares Pino, Sebastian Andres"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Onofre", "name": "Anto\u0301nio", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Onofre, Ant\u00f3nio"}, {"surname": "Onogi", "name": "Kouta", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Onogi, Kouta"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oppen", "name": "Henrik", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Oppen, Henrik"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlando", "name": "Nicola", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Orlando, Nicola"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Otono", "name": "Hidetoshi", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Otono, Hidetoshi"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": "Ahmimed", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Oussoren", "name": "Koen Pieter", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Oussoren, Koen Pieter"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Rhys Edward", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Owen, Rhys Edward"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pachal", "name": "Katherine", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Pachal, Katherine"}, {"surname": "Pacheco Pages", "name": "Andres", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Pacheco Pages, Andres"}, {"surname": "Pacheco Rodriguez", "name": "Laura", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Pacheco Rodriguez, Laura"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Pagan Griso, Simone"}, {"surname": "Paganini", "name": "Michela", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Paganini, Michela"}, {"surname": "Paige", "name": "Frank", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Paige, Frank"}, {"surname": "Palacino", "name": "Gabriel", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Palacino, Gabriel"}, {"surname": "Palazzo", "name": "Serena", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Palazzo, Serena"}, {"surname": "Palestini", "name": "Sandro", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Palestini, Sandro"}, {"surname": "Palka", "name": "Marek", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Palka, Marek"}, {"surname": "Pallin", "name": "Dominique", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Pallin, Dominique"}, {"surname": "Panagiotopoulou", "name": "Evgenia", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Panagiotopoulou, Evgenia"}, {"surname": "Panagoulias", "name": "Ilias", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Panagoulias, Ilias"}, {"surname": "Pandini", "name": "Carlo Enrico", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Pandini, Carlo Enrico"}, {"surname": "Panduro Vazquez", "name": "William", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Panduro Vazquez, William"}, {"surname": "Pani", "name": "Priscilla", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Pani, Priscilla"}, {"surname": "Panitkin", "name": "Sergey", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Panitkin, Sergey"}, {"surname": "Pantea", "name": "Dan", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Pantea, Dan"}, {"surname": "Paolozzi", "name": "Lorenzo", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Paolozzi, Lorenzo"}, {"surname": "Papadopoulou", "name": "Theodora", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Papadopoulou, Theodora"}, {"surname": "Papageorgiou", "name": "Konstantinos", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Papageorgiou, Konstantinos"}, {"surname": "Paramonov", "name": "Alexander", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Paramonov, Alexander"}, {"surname": "Paredes Hernandez", "name": "Daniela", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Paredes Hernandez, Daniela"}, {"surname": "Parker", "name": "Adam Jackson", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Parker, Adam Jackson"}, {"surname": "Parker", "name": "Michael Andrew", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Parker, Michael Andrew"}, {"surname": "Parker", "name": "Kerry Ann", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Parker, Kerry Ann"}, {"surname": "Parodi", "name": "Fabrizio", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Parodi, Fabrizio"}, {"surname": "Parsons", "name": "John", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Parsons, John"}, {"surname": "Parzefall", "name": "Ulrich", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Parzefall, Ulrich"}, {"surname": "Pascuzzi", "name": "Vincent", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Pascuzzi, Vincent"}, {"surname": "Pasner", "name": "Jacob Martin", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Pasner, Jacob Martin"}, {"surname": "Pasqualucci", "name": "Enrico", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Pasqualucci, Enrico"}, {"surname": "Passaggio", "name": "Stefano", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Passaggio, Stefano"}, {"surname": "Pastore", "name": "Francesca", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Pastore, Francesca"}, {"surname": "Pataraia", "name": "Sophio", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Pataraia, Sophio"}, {"surname": "Pater", "name": "Joleen", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Pater, Joleen"}, {"surname": "Pauly", "name": "Thilo", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Pauly, Thilo"}, {"surname": "Pearson", "name": "Benjamin", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Pearson, Benjamin"}, {"surname": "Pedraza Lopez", "name": "Sebastian", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Pedraza Lopez, Sebastian"}, {"surname": "Pedro", "name": "Rute", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Pedro, Rute"}, {"surname": "Peleganchuk", "name": "Sergey", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Peleganchuk, Sergey"}, {"surname": "Penc", "name": "Ondrej", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Penc, Ondrej"}, {"surname": "Peng", "name": "Cong", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Peng, Cong"}, {"surname": "Peng", "name": "Haiping", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Peng, Haiping"}, {"surname": "Penwell", "name": "John", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Penwell, John"}, {"surname": "Peralva", "name": "Bernardo", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Peralva, Bernardo"}, {"surname": "Perego", "name": "Marta Maria", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Perego, Marta Maria"}, {"surname": "Perepelitsa", "name": "Dennis", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Perepelitsa, Dennis"}, {"surname": "Peri", "name": "Francesco", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Peri, Francesco"}, {"surname": "Perini", "name": "Laura", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Perini, Laura"}, {"surname": "Pernegger", "name": "Heinz", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Pernegger, Heinz"}, {"surname": "Perrella", "name": "Sabrina", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Perrella, Sabrina"}, {"surname": "Peschke", "name": "Richard", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Peschke, Richard"}, {"surname": "Peshekhonov", "name": "Vladimir", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Peshekhonov, Vladimir"}, {"surname": "Peters", "name": "Krisztian", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Peters, Krisztian"}, {"surname": "Peters", "name": "Yvonne", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Peters, Yvonne"}, {"surname": "Petersen", "name": "Brian", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Petersen, Brian"}, {"surname": "Petersen", "name": "Troels", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Petersen, Troels"}, {"surname": "Petit", "name": "Elisabeth", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Petit, Elisabeth"}, {"surname": "Petridis", "name": "Andreas", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Petridis, Andreas"}, {"surname": "Petridou", "name": "Chariclia", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Petridou, Chariclia"}, {"surname": "Petroff", "name": "Pierre", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Petroff, Pierre"}, {"surname": "Petrolo", "name": "Emilio", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Petrolo, Emilio"}, {"surname": "Petrov", "name": "Mariyan", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Petrov, Mariyan"}, {"surname": "Petrucci", "name": "Fabrizio", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Petrucci, Fabrizio"}, {"surname": "Pettersson", "name": "Nora Emilia", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Pettersson, Nora Emilia"}, {"surname": "Peyaud", "name": "Alan", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Peyaud, Alan"}, {"surname": "Pezoa", "name": "Raquel", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Pezoa, Raquel"}, {"surname": "Phillips", "name": "Forrest Hays", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Phillips, Forrest Hays"}, {"surname": "Phillips", "name": "Peter William", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Phillips, Peter William"}, {"surname": "Piacquadio", "name": "Giacinto", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Piacquadio, Giacinto"}, {"surname": "Pianori", "name": "Elisabetta", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Pianori, Elisabetta"}, {"surname": "Picazio", "name": "Attilio", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Picazio, Attilio"}, {"surname": "Piccaro", "name": "Elisa", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Piccaro, Elisa"}, {"surname": "Pickering", "name": "Mark Andrew", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Pickering, Mark Andrew"}, {"surname": "Piegaia", "name": "Ricardo", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Piegaia, Ricardo"}, {"surname": "Pilcher", "name": "James", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Pilcher, James"}, {"surname": "Pilkington", "name": "Andrew", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Pilkington, Andrew"}, {"surname": "Pin", "name": "Arnaud Willy J.", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Pin, Arnaud Willy J"}, {"surname": "Pinamonti", "name": "Michele", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Pinamonti, Michele"}, {"surname": "Pinfold", "name": "James", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Pinfold, James"}, {"surname": "Pirumov", "name": "Hayk", "pid": [], "rank": 1988, "affiliation": [], "fullname": "Pirumov, Hayk"}, {"surname": "Pitt", "name": "Michael", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Pitt, Michael"}, {"surname": "Plazak", "name": "Lukas", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Plazak, Lukas"}, {"surname": "Pleier", "name": "Marc-Andre", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Pleier, Marc-Andre"}, {"surname": "Pleskot", "name": "Vojtech", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Pleskot, Vojtech"}, {"surname": "Plotnikova", "name": "Elena", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Plotnikova, Elena"}, {"surname": "Pluth", "name": "Daniel", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Pluth, Daniel"}, {"surname": "Podberezko", "name": "Pavel", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Podberezko, Pavel"}, {"surname": "Poettgen", "name": "Ruth", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Poettgen, Ruth"}, {"surname": "Poggi", "name": "Riccardo", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Poggi, Riccardo"}, {"surname": "Poggioli", "name": "Luc", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Poggioli, Luc"}, {"surname": "Pohl", "name": "David-Leon", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Pohl, David-Leon"}, {"surname": "Polesello", "name": "Giacomo", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Polesello, Giacomo"}, {"surname": "Poley", "name": "Anne-Luise", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Poley, Anne-Luise"}, {"surname": "Policicchio", "name": "Antonio", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Policicchio, Antonio"}, {"surname": "Polifka", "name": "Richard", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Polifka, Richard"}, {"surname": "Polini", "name": "Alessandro", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Polini, Alessandro"}, {"surname": "Pollard", "name": "Christopher Samuel", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Pollard, Christopher Samuel"}, {"surname": "Polychronakos", "name": "Venetios", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Polychronakos, Venetios"}, {"surname": "Pomme\u0300s", "name": "Kathy", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Pomm\u00e8s, Kathy"}, {"surname": "Ponomarenko", "name": "Daniil", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Ponomarenko, Daniil"}, {"surname": "Pontecorvo", "name": "Ludovico", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Pontecorvo, Ludovico"}, {"surname": "Popeneciu", "name": "Gabriel Alexandru", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Popeneciu, Gabriel Alexandru"}, {"surname": "Poppleton", "name": "Alan", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Poppleton, Alan"}, {"surname": "Pospisil", "name": "Stanislav", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Pospisil, 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These data are those presented in Forrester and Pinfield 2015 Scientific Reports paper on soft acoustic metamaterials. The data are the results of simulations based on multiple scattering models. These were carried out in MATLAB using code based on the ultrasound scattering models described in the paper.

The zip file contains 22 Excel spreadsheets relating to the figures in the paper. Some are labelled by figure number, and others by the system simulated.

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The dataset includes 44852 records from 405 constituent datasets: \n 3 records from Bioimages. \n 4 records from CBDC: Cumbria Wildlife Trust: survey records from 1970 - 2007 of County Wildlife Sites.. \n 1 records from Merseyside BioBank (unverified). \n 2 records from NBIS Records to December 2016. \n 142 records from Marie-Victorin Herbarium (MT) - Plantes vasculaires. \n 1 records from OEH Atlas of NSW Wildlife. \n 76 records from University of British Columbia Herbarium (UBC) - Vascular Plant Collection. \n 376 records from Phanerogamic Botanical Collections (S). \n 71 records from Jordal. \n 3 records from University of Vienna, Institute for Botany - Herbarium WU. \n 11 records from Database of Vascular Plants of Himalaya. \n 4 records from Isle of Man wildlife records from 01/01/2000 to 13/02/2017. \n 217 records from Vascular Plants, Field notes, Agder naturmuseum (KMN). \n 5 records from IAC - Herb\u00e1rio do Instituto Agron\u00f4mico de Campinas. \n 568 records from Naturalis Biodiversity Center (NL) - Botany. \n 3 records from PlutoF platform observations. \n 2 records from SP - Herb\u00e1rio do Estado \"Maria Eneyda P. Kaufmann Fidalgo\" - Cole\u00e7\u00e3o de Faner\u00f3gamas. \n 57 records from Plant Specimen from Herbarium (HIB) in China, Wuhan Botanical Garden, Chinese Academy of Sciences. \n 17 records from Plant Specimen in Yunnan, China from Herbarium (PE),Institute of Botany, Chinese Academy of Sciences. \n 18 records from SANT Herbarium vascular plants collection. \n 8 records from Harriet Irving Botanical Gardens (HIBG). \n 5 records from Species plots from the Norwegian Vegetation Mapping Programme. \n 1 records from Sistematizaci\u00f3n de la colecci\u00f3n entomol\u00f3gica y actualizaci\u00f3n de la colecci\u00f3n del herbario CHIP del Instituto de Historia Natural y Ecolog\u00eda (IHNE), Chiapas. \n 316 records from Vascular plants in Denmark recorded under the The Nationwide Monitoring and Assessment Programme for the Aquatic and Terrestrial Environments (NOVANA). \n 45 records from Karplanter i vernet barskog og edell\u00f8vskog. \n 10 records from University of Alberta Vascular Plant Herbarium (ALTA-VP). \n 125 records from Some Plant Specimens from KUN, IBSC, NAS Herbarium in China from 1900 to 1950. \n 204 records from Plant Specimen from Herbarium (CDBI) in China, Chengdu Institute of Botany, Chinese Academy of Sciences. \n 845 records from Florabank1 - A grid-based database on vascular plant distribution in the northern part of Belgium (Flanders and the Brussels Capital region). \n 74 records from RECORD Vascular Plant Data. \n 100 records from The digitization of plant specimens of NTU. \n 1 records from Local Wildlife Site Surveys Berkshire. \n 37 records from Phytochorologie des d\u00e9partements fran\u00e7ais. \n 107 records from BioFokus. \n 155 records from Herbier Louis-Marie (QFA) - Collection de plantes vasculaires. \n 17 records from Vascular plant herbarium, Agder naturmuseum og botaniske hage. \n 8 records from Cat\u00e1logo electr\u00f3nico de espec\u00edmenes depositados en el Herbario de la Universidad de Texas en Austin, Fase IV. \n 32 records from Inventaire National du Patrimoine Naturel : CBN Aquitaine-Poitou-Charentes. \n 105 records from Dutch Foundation for Applied Water Research (STOWA) - Limnodata Neerlandica. \n 3407 records from Artportalen (Swedish Species Observation System). \n 135 records from Plant Specimen Database of Tama Forest Science Garden, Forestry and Forest Products Research Institute, Japan. \n 3 records from Flora of S\u0142owi\u0144ski National Park, Poland. \n 6 records from MBM - Herb\u00e1rio do Museu Bot\u00e2nico Municipal. \n 6 records from Stabbetorp - Floristiske registreringer 2016. \n 6 records from Herbario Museo de La Salle Bogot\u00e1 (BOG). \n 3 records from Miscellaneous records held on the Cofnod database. \n 1 records from River Macrophytes Database. \n 3 records from Gothenburg Herbarium - Types (GBIF:IH:GB:Herbarium). \n 6 records from Inventaire National du Patrimoine Naturel : Flore du Limousin. \n 38 records from Oskarshamn herbarium (OHN). \n 311 records from Donn\u00e9es ONF Faune-Flore-Fonge. \n 2 records from Tallinn Botanic Garden. \n 15 records from Norwegian Biodiversity Information Centre - Other datasets. \n 14 records from Australia's Virtual Herbarium. \n 467 records from CSIC-Real Jard\u00edn Bot\u00e1nico-Anthos. Sistema de Informaci\u00f3n de las Plantas de Espa\u00f1a. \n 3 records from Herbier de Strasbourg. \n 207 records from Vascular Plant Herbarium, UiB. \n 29 records from DBG Kathryn Kalmbach Herbarium. \n 27 records from Banco de Germoplasma del Jard\u00edn Bot\u00e1nico Atl\u00e1ntico. \n 2 records from Hertfordshire Flora Survey Records 1987-2005. \n 3 records from Natural History Museum Maastricht (NL) - Herbarium. \n 659 records from Consortium of California Herbaria. \n 34 records from NRW Regional Data: all taxa (excluding sensitive species), West Wales. \n 504 records from iNaturalist Research-grade Observations. \n 17 records from UCBG TAPIR Provider. \n 1 records from Commissioned surveys and staff surveys and reports for Scottish Wildlife Trust reserves - Unassessed data. \n 55 records from ARKO strandeng. \n 68 records from CONN. \n 2 records from HUCS - Herb\u00e1rio da Universidade de Caxias do Sul. \n 39 records from Other BSBI Scottish data up to 2012. \n 21 records from Butler University Friesner Herbarium (BUT). \n 1 records from Merseyside BioBank Active Naturalists (unverified). \n 7 records from McGill University Herbarium Database. \n 59 records from University of Lethbridge Herbarium (LEA). \n 7 records from LSU Shirley C. Tucker Herbarium at Louisiana State University - Vascular Plants. \n 16 records from Estonian Museum of Natural History. \n 1 records from Cat\u00e1logo electr\u00f3nico de espec\u00edmenes depositados en el Herbario de la Universidad de Texas en Austin, Fase IV. \n 1 records from Collection botanique Le Grand A. (BOUM). \n 13 records from NINA botanical collection. \n 4 records from National Trust Species Records. \n 321 records from UAM Herbarium (ALA), Vascular Plant Collection (Arctos). \n 10 records from Finnish Floristic Database (Small Collections). \n 101 records from Estonian University of Life Sciences. \n 536 records from Plant Specimen from Herbarium (NAS) in China, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences. \n 1 records from Hochschulgel\u00e4nde (Bremen). \n 3 records from Fungus Collections at Staatliches Museum f\u00fcr Naturkunde Karlsruhe (Herbarium KR). \n 2 records from Paul-Gerhardt-Schule Dassel. \n 1 records from Urwald 3 (Bad Waldsee). \n 1 records from Warnowtal (Rostock). \n 1 records from Sudeniederung (Amt Neuhaus). \n 1 records from Kaltenkirchen Brache. \n 1 records from Tiere und Pflanzen am Pfannenbach. \n 1 records from Schulgel\u00e4nde Paul-Gerhardt-Schule. \n 1 records from VFD-RP: Taunus: Kirchenweide K\u00f6pplers. \n 1 records from Weinberg Reichersdorf. \n 19 records from Inventaire National du Patrimoine Naturel : CBN Brest. \n 1 records from Tag der Artenvielfalt in Heidelberg. \n 24 records from Herbarium specimens of Soci\u00e9t\u00e9 des Sciences Naturelles et Math\u00e9matiques de Cherbourg (CHE). \n 1 records from VFD-RP: Taunus: M\u00e4hweide Dehe. \n 735 records from Occurrence Data of Vascular Plants collected or compiled for the Flora of Bavaria. \n 2 records from Sammlung altes Gartenherbar Herbarium Hamburgense HBG. \n 30 records from OAC-BIO Herbarium. \n 24 records from Yorkshire Wildlife Trust - Non-sensitive records from all taxonomic groups. \n 7 records from Naturhistorisches Museum Mainz, Feldbeobachtungsdaten Pflanzen. \n 12 records from SEWBReC Vascular Plants (South East Wales). \n 331 records from naturgucker. \n 3 records from Standing Waters Database - Scotland. \n 1 records from Schulaktion des Dienzenhofer-Gymnasiums. \n 1 records from Donauinsel des BN bei Entau. \n 2 records from Vascular Plants Collection of National Museum of Nature and Science. \n 2428 records from Dutch Vegetation Database (LVD). \n 1392 records from INPN - Donn\u00e9es flore des CBN agr\u00e9g\u00e9es par la FCBN. \n 17 records from NZ National Vegetation Survey occurrence data. \n 7 records from The Fungal Collection at the Senckenberg Museum f\u00fcr Naturkunde G\u00f6rlitz. \n 19 records from Herbario XAL del Instituto de Ecolog\u00eda, A.C., M\u00e9xico (IE-XAL). \n 9 records from Herbario IEB del Instituto de Ecolog\u00eda, A.C., M\u00e9xico (IE-BAJ\u00edO). \n 3 records from CeDoc de Biodiversitat Vegetal: BCN-Seeds. \n 120 records from Vascular plant specimens of Akita Prefectural Museum. \n 13 records from Jardin botanique de Montr\u00e9al (JBM). \n 86 records from FKSE-Herbarium specimens of Faculty of Symbiotic Systems Science, Fukushima University, Japan. \n 68 records from Royal Botanic Garden Edinburgh Living Plant Collections (E). \n 170 records from Angiospermatatophytina Collection of Saitama Museum of Natural History. \n 10 records from Plant (KIWE-PL). \n 20 records from Plant (JNHM-PL). \n 1 records from Plant (MNHM-PL). \n 3 records from Plant (NHMC-PL). \n 6 records from Plant (GFEI-PL). \n 42 records from Plant (NSMK-PL). \n 1 records from Plant (NHMK-PL). \n 2 records from Herbaria of the University and ETH Z\u00fcrich. \n 8 records from Tiroler Landesmuseum Ferdinandeum. \n 12 records from The Vascular Plant Collection at the Botanische Staatssammlung M\u00fcnchen. \n 70 records from IBF Monitoring of Vascular Plants. \n 1 records from Inventario flor\u00edstico de los cerros San Mart\u00ed y El Patol en el semidesierto queretano. \n 1 records from Vascular plant specimens of Iida City Museum. \n 183 records from Tropicos Specimen Data. \n 3 records from BRERC species records recorded over 15 years ago. \n 1 records from Naturhistorisches Museum Mainz, Botanical Collection. \n 1 records from Botanical Research Intitute of Texas. \n 24 records from Natural History Museum (London) Collection Specimens. \n 18 records from Cat\u00e1logo Flor\u00edstico Hist\u00f3rico de Navarra. Gobierno de Navarra. \n 6 records from Natural History Museum, Vienna - Herbarium W. \n 384 records from Waarnemingen.be - Non-native plant occurrences in Flanders and the Brussels Capital Region, Belgium. \n 270 records from NatureServe Network Species Occurrence Data. \n 3 records from An\u00e1lisis de la heterogeneidad ambiental y conectividad de las \u00e1reas naturales del sur del Valle de M\u00e9xico. \n 2 records from Base de datos del Herbario de la Unidad Acad\u00e9mica de Agronom\u00eda de la Universidad Aut\u00f3noma de Zacatecas. \n 5 records from Flora-On: occurrence data of the flora of mainland Portugal. \n 3 records from An\u00e1lisis de la heterogeneidad ambiental y conectividad de las \u00e1reas naturales del sur del Valle de M\u00e9xico_1. \n 6 records from Colecci\u00f3n cient\u00edfica del Museo de Historia Natural Alfredo Dug\u00e9s. \n 3 records from Plant Specimens of Oiso Municipal Museum. \n 50 records from Plant specimens of Hokkaido University Museum. \n 20 records from Vascular Plant Collection of Natural History Museum and Institute, Chiba. \n 127 records from Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan. \n 11 records from Universidad de Barcelona. Grup dInvestigaci\u00f3 Geobot\u00e1nica i Cartografia de la Vegetaci\u00f3. \n 2 records from KNWR Herbarium Collection. \n 11 records from Botanical specimens database of Mr. Jiro Ito collection, Shizuoka Prefecture Museum of Natural History. \n 7 records from Dataflos. \n 173 records from Ibaraki Nature Museum, Vascular Plants collection. \n 4 records from Leiner-Herbar Konstanz. \n 16 records from Survey and monitoring records for Scottish Wildlife Trust reserves from reserve convenors and Trust volunteers - Unassessed data. \n 130 records from NMNH Extant Specimen Records. \n 50 records from The Himalayan Uplands Plant database (HUP Version 1). \n 5 records from Botanical Garden Collection. \n 4 records from Korean Ethnobotany Database. \n 4 records from Factual Database of Native Flora Seeds in Korea. \n 21 records from Canadian Museum of Nature Herbarium. \n 253 records from Vascular Plant Collection - University of Washington Herbarium (WTU). \n 5 records from Fairchild Tropical Botanic Garden Virtual Herbarium Darwin Core format. \n 74 records from Herbarium (ICEL). \n 17 records from Herbarium (AMNH). \n 787 records from Observational database of Icelandic plants. \n 20 records from Colecci\u00f3n de plantas vasculares del herbario de la Universitat de Val\u00e8ncia (VAL).. \n 33 records from Herbario de Plantas Vasculares de la Universidad de Salamanca: SALA. \n 114 records from CSIC-Real Jard\u00edn Bot\u00e1nico-Colecci\u00f3n de Plantas Vasculares (MA). \n 2 records from Universidad del Pa\u00ed\u00ads Vasco/EHU, Bilbao: Herbario BIO. \n 20 records from Universidad de Oviedo. Departamento de Biolog\u00eda de Organismos y Sistemas: FCO. \n 5 records from Herbario EMMA. Herbario de la Escuela T\u00e9cnica Superior de Ingenieros de Montes. UPM. \n 15 records from Herbario de la Universidad de Sevilla. \n 3 records from Herbario de la Universidad de Sevilla, SEV-Historico. \n 3 records from Herbario HSS Finca La Orden-Valdesequera (CICYTEX). Gobierno de Extremadura. \n 13 records from Institut Botanic de Barcelona, BC. \n 22 records from Auckland Museum Botany Collection. \n 6 records from Botanic Garden of the Finnish Museum of Natural History. \n 9 records from Herbarium of Jyv\u00e4skyl\u00e4 University Museum. \n 2 records from Plant in Baekdu Mountain (KIDR-PL). \n 7 records from Royal Botanical Gardens Herbarium. \n 78 records from New Zealand Virtual Herbarium. \n 6 records from DAO Herbarium Type Specimens. \n 2 records from herbario. \n 1 records from Vascular Plants Collection of National Museum of Nature and Science. \n 300 records from Plant Specimens of Kurashiki Museum of Natural History. \n 44 records from Herbarium Specimens of Tokushima Prefectural Museum, Japan. \n 9 records from Herbarium of Kitakyushu Museum of Natural History and Human History. \n 288 records from Vascular Plant Collection. \n 3 records from Arizona State University Vascular Plant Herbarium. \n 2 records from University of Copenhagen Arboretum. \n 2 records from Botany registration database by Danish botanists. \n 36 records from Herbarium Faeroense. \n 11 records from Botanical Museum, Copenhagen. Database of type specimens. \n 180 records from DAV UC Davis Center for Plant Diversity. \n 14 records from Herbarium (UNA). \n 3 records from MEXU/Tipos de plantas vasculares. \n 20 records from Actualizaci\u00f3n de las bases de datos del Herbario XAL. Fase III. \n 1 records from Flora exsiccata Bavarica. \n 1 records from GEO Biodiversity Day. \n 50 records from Herbarium Berolinense. \n 33 records from Staatliches Museum f\u00fcr Naturkunde Stuttgart, Herbarium. \n 18 records from Observations du Conservatoire botanique national du Bassin parisien.. \n 1 records from Biologiezentrum Linz. \n 5 records from Herbarium Senckenbergianum G\u00f6rlitz (GLM). \n 52 records from United States National Plant Germplasm System Collection. \n 1 records from The System-wide Information Network for Genetic Resources (SINGER). \n 2 records from The Erysiphales Collection at the Botanische Staatssammlung M\u00fcnchen. \n 1 records from The Erysiphales Collection at the University Halle-Wittenberg. \n 105 records from Nordic Genetic Resources. \n 40 records from USU-UTC Specimen Database. \n 7 records from Universidad Polit\u00e9cnica de Madrid, Dpto. Biolog\u00eda Vegetal, Banco de Germoplasma. \n 4 records from Institut Botanic de Barcelona, BC-Hist\u00f3rico. \n 3 records from Herbarium de Geo. B. Hinton, M\u00e9xico. \n 6 records from Plant Specimens of Lake Biwa Museum. \n 82 records from Angiosperm specimens of Iwate Prefectural Museum. \n 77 records from Vascular Plants Collection of Sagamihara City Museum. \n 204 records from Harvard University Herbaria. \n 5 records from Vascular plants of south-central China. \n 124 records from Specimen Database of Colorado Vascular Plants. \n 10 records from Visual Plants (144.41.33.158) - Botanical garden, University of Hohenheim, Germany. \n 1 records from Herbarium BSG Vascular Plants. \n 3 records from inatura - Erlebnis Naturschau Dornbirn. \n 2 records from Inventaire National du Patrimoine Naturel : Programme national esp\u00e8ces v\u00e9g\u00e9tales de la Directive Habitat. \n 109 records from EURISCO, The European Genetic Resources Search Catalogue. \n 184 records from Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Prefecture, Japan. \n 7 records from Plant Specimens of Taga Town Museum, Shiga Pref., Japan. \n 259 records from Plant specimens depodited in Osaka Museum of Natural History, Japan.. \n 39 records from Kochi Prefectural Makino Botanical Garden. \n 20 records from Plant Specimens of The Shimane Nature Museum of Mt. Sanbe. \n 2 records from PlantBank Records. \n 1 records from SER Site-based Surveys. \n 2 records from Biodiversit\u00e4tsdatenbank des Landes Salzburg. \n 2 records from Repatriaci\u00f3n de datos del Herbario de Arizona (ARIZ). \n 2 records from Vascular Plants, Observations, Oslo (O). \n 25 records from Oklahoma Vascular Plants Database Provider. \n 1 records from Schlichemquelle (Tieringen/Me\u00dfstetten). \n 1 records from Zuk\u00fcnftiges NSG H\u00f6ftland/Bockholmwik. \n 1 records from NSG H\u00fclenbuch H\u00f6rnle (Tieringen/Me\u00dfstetten). \n 1 records from Neckartals\u00fcdhang (Horb). \n 1 records from GEO-Hauptveranstaltung (Insel Vilm). \n 1 records from BUND - Dassower See (L\u00fcbeck/Dassow). \n 1 records from Sudeniederung (Amt Neuhaus), Landkreis L\u00fcneburg. \n 1 records from 20 Jahre Naturschutzgebiet Dreienberg. \n 1 records from Heinersdorfer Sumpfwiese. \n 1 records from Wismar Bucht coast-watching. \n 1 records from Stadtgebiet (Dannenberg). \n 1 records from Bergkamen- Bergehalde Gro\u00dfes Holz. \n 1 records from Tiergarten Straubing. \n 1 records from Wupperaue bei Kemna (Wuppertal). \n 2 records from Naturerlebnisraum Koppelsberg. \n 126 records from Plantae, TAIF (Taiwan e-Learning and Digital Archives Program, TELDAP). \n 775 records from Atlas Flora Danica. \n 18 records from Scottish SNH-funded BSBI records. \n 18 records from Herbarium of Namur. \n 35 records from Natural History Museum, University of Tartu. \n 19 records from Herbarium of Ume\u00e5 University (UME). \n 86 records from Base de datos de plantas vasculares del Pa\u00eds Vasco: ARAN-EH. \n 31 records from Field Museum of Natural History (Botany) Seed Plant Collection. \n 10 records from NRW Regional Data: North Wales. \n 41 records from MPM Milwaukee Public Museum Herbarium. \n 8 records from Polish gene bank \u2013 passport data of plants accessions which are important in human life. \n 3 records from Belgian IFBL Flora Checklists (1939-1971). \n 59 records from Inventaire National du Patrimoine Naturel : Flore Franco-Belge. \n 1 records from Sp\u00e9cimens d'herbiers de G. Fenoul (FEN). \n 1 records from Westerw\u00e4lder Umwelt- und Naturschutztag an der Fuchskaute im Westerwald. \n 1 records from Auenwiesen und Trockenrasen. \n 73 records from Colorado State University Herbarium. \n 15 records from EKY_Darwincore. \n 16 records from MISS_DC_01MAR2006. \n 37 records from NCSU_Darwincore. \n 73 records from R. L. McGregor Herbarium Vascular Plants Collection. \n 1 records from Herbario de la Universidad P\u00fablica de Navarra, Pamplona: UPNA-H. \n 629 records from Vascular Plant Specimen Database of Kanagawa Prefectural Museum of Natural History. \n 160 records from Gunma Museum of Natural History, Vascular Plant Specimen. \n 1273 records from Plant. \n 1 records from Jard\u00edn Bot\u00e1nico Atl\u00e1ntico, Gij\u00f3n: JBAG. \n 2 records from MGC Herbarium of University of Malaga (Spain): MGC-Cormof dataset. \n 11 records from Biological and palaeontological collection and observation data MNHNL. \n 64 records from Botany Division, Yale Peabody Museum. \n 1 records from VFD-RP, Taunus: Bergweide Dehe. \n 10 records from Herbarium Senckenbergianum (FR). \n 19 records from Universidad de Oviedo. Departamento de Biolog\u00eda de Organismos y Sistemas: FCO-Briof. \n 52 records from Database of Native Plants in Taiwan. \n 4 records from Flora (vascular) y fauna (aves) de los Parques Nacionales del estado de Baja California: Constituci\u00f3n de 1857 y Sierra San Pedro M\u00e1rtir. \n 8 records from Plant of Folklore (KIDR-PL). \n 38 records from Herbarium of Taiwan Forestry Research Institute. \n 11 records from Herbarium specimens of the Mus\u00e9um d'Histoire Naturelle of Aix-en-Provence (AIX). \n 9 records from Etapa final de la captura y catalogaci\u00f3n del Herbario del Instituto de Ecolog\u00eda, AC, Centro Regional del Baj\u00edo. \n 4 records from Plant - Seed (KIDR-PL). \n 5 records from Banco de datos flor\u00edsticos del Herbario CHAP. \n 25 records from Monitoring records of plant species in the Hakone region of Fuji-Hakone-Izu National Park, Japan, 2001-2010. \n 1 records from WII Herbarium Dataset. \n 24 records from National vegetation diversity inventory and mapping plan. \n 13 records from VIT Herbarium - Vascular Plants (The Natural History Museum of Alava). \n 1 records from Vascular Herbarium, NMBU. \n 67 records from National Wetland Inventory (NV). \n 1002 records from FloraCAT: Banco de datos de los corm\u00f3fitos de Catalu\u00f1a. \n 1 records from Herbarium specimens, Harmas J.H. Fabre (FABR - S\u00e9rignan-du-Comtat) of the Mus\u00e9um national d'Histoire naturelle (MNHN - Paris). \n 1329 records from Flora d'Andorra. \n 4 records from National System of Protected Areas in Poland - Plants. \n 4 records from Rotherham Biological Records Centre - Non-sensitive Records from all taxonomic groups. \n 1 records from ArtenFinder. \n 262 records from Lund Botanical Museum (LD). \n 48 records from Natural Resources Wales Regional Data : Mid-Wales. \n 3 records from VegetWeb - Repositorium von Vegetationsaufnahmen a. \n 2 records from University of South Florida Herbarium (USF). \n 13 records from Plant Specimen from Herbarium (LBG) in China, Lushan Botanical Garden, Jiangxi and Chinese Academy of Sciences. \n 1530 records from Norwegian Species Observation Service. \n 5 records from Vascular Plants, Museum of Archaeology, University of Stavanger. \n 37 records from Plant Specimen from Herbarium (IBK) in China, Guangxi Institute of Botany, Chinese Academy of Sciences. \n 1349 records from The vascular plants collection (P) at the Herbarium of the Mus\u00e9um national d'Histoire Naturelle (MNHN - Paris). \n 12 records from LERN Records. \n 5 records from SBT-Living. \n 87 records from Hatikka Observation Database. \n 2 records from The Vascular Plants Collection of the University of Goettingen. \n 1 records from University of Florida Herbarium (FLAS). \n 12 records from Bernice P. Bishop Museum. \n 35 records from Carnet en Ligne. \n 3 records from ENDEMIC SPECIES RESEARCH INSTITUTE\uff08Herbarium\uff09. \n 11 records from Seed collection \u2013 Dead seeds for evaluation and observation purposes. \n 8 records from ARKO kulturmarkseng. \n 102 records from Royal Botanic Garden Edinburgh Herbarium (E). \n 1 records from All observations extracted from the Flora of Northumberland and Durham 1831. \n 121 records from Waarnemingen.be - Plant occurrences in Flanders and the Brussels Capital Region, Belgium. \n 52 records from Michigan State University Herbarium Vascular Plants. \n 2 records from Estudio flor\u00edstico de la Sierra de Pachuca, Hidalgo, M\u00e9xico. \n 250 records from Botany (UPS). \n 6 records from Museu de Ci\u00e8ncies Naturals de Barcelona: BGJBB. \n 17 records from Merseyside BioBank (verified). \n 2 records from Type herbarium, G\u00f6ttingen (GOET). \n 39 records from Herbier du Qu\u00e9bec (QUE) - Collection de plantes vasculaires. \n 51 records from Herbarium Specimens of Bonin and Ryukyu Islands. \n 5 records from Flora of Worcestershire. \n 7 records from Computarizaci\u00f3n del Herbario ENCB. Fase I (Base de datos de los ejemplares del Valle de M\u00e9xico). \n 4 records from University of British Columbia Botanical Garden Collections (UBCBG). \n 3 records from PlutoF platform reference-based occurrences. \n 54 records from Herbarium specimens of Universit\u00e9 de Montpellier 2, Institut de Botanique (MPU)). \n 937 records from Finnish Floristic Database (Literature Sources). \n 1 records from Base de datos computarizada del herbario CIB, Instituto de Investigaciones Biol\u00f3gicas, Universidad Veracruzana. \n 3 records from Institut Menorqu\u00ed d'Estudis. Colecci\u00f3n Hist\u00f3rica de Rodr\u00edguez Femen\u00edas, Herbarium Generale Minoricae: HGM-Femenias. \n 50 records from Royal Botanic Gardens, Kew - Herbarium Specimens. \n 3 records from Verneplan Hjerkinn karplanter. \n 128 records from Vascular plant herbarium, Troms\u00f8 Museum. \n 178 records from Vascular plant herbarium, NTNU University Museum. \n 311 records from Donn\u00e9es ONF Faune-Flore-FOnge. \n 96 records from Institute of Ecology and Evolutionary Biology, National Taiwan University. \n 1563 records from Vascular Plants, Field notes, Oslo (O). \n 211 records from The New York Botanical Garden Herbarium (NY) - Vascular Plant Collection. \n 822 records from Sistema de Informaci\u00f3n de la vegetaci\u00f3n Ib\u00e9rica y Macaron\u00e9sica. \n 12 records from Distribution of Higher Plants in Greater Manchester. \n 283 records from Vegetation data from protected areas in Denmark (\u00a7 3 in the Danish Nature Protection Act). \n 311 records from Donn\u00e9es ONF Faune-Flore-FOnge. \n 2 records from Wilson Botanical Garden - Las Cruces Biological Station. \n 25 records from Ecofact. \n 11 records from Green Plant Herbarium (TRT). \n 7 records from Inventaire National du Patrimoine Naturel : Flore du Massif Armoricain. \n 121 records from Gothenburg Herbarium - General (GBIF:IH:GB:Herbarium). \n 3 records from Plant Observation Records of Japan. \n 645 records from Floristic Databases of Mecklenburg-Pomerania - Higher Plants. \n 40 records from Herbarium specimens of Herbiers Universitaires de Clermont-Ferrand (CLF). \n 39 records from Allan Herbarium (CHR). \n 1 records from IRAI - Herb\u00e1rio do Parque da Ci\u00eancia Newton Freire Maia. \n 90 records from SysTax - Botanical Gardens. \n 1 records from Herbarium specimens of CBNA (GAP). \n 2 records from Korean Peninsula Flora. \n 1 records from Gipuzkoako Foru Aldundiaren Landareen Germoplama Bankua / Banco de Germoplasma Vegetal de la Diputaci\u00f3n Foral de Gipuzkoa. \n 1 records from CZE National PGR Inventory. \n 13 records from Tracheophyta collection of Biodiversity Center of Japan, Ministry of Environment. \n 2 records from Digitization of plant specimens from Rhoen and Vogelsberg (FULD). \n 356 records from Vascular Plant Herbarium, Oslo (O). \n 5 records from Herbarium specimens of Jardins botaniques and Conservatoire Botanique of Nancy (NCY). \n 2 records from Natural History Museum Rotterdam (NL) - Plantae collection. \n 3 records from Environmental Monitoring Database Species data 1987 to 2015. \n 2429 records from Flora von Deutschland (Phanerogamen). \n 5 records from Suffolk Biodiversity Information Service (SBIS) Dataset. \n 3 records from WTSWW Data: All Taxa (West Wales). \n 38 records from E. C. Smith Herbarium (ACAD). \n 1 records from Propuesta para sistematizar la colecci\u00f3n palinol\u00f3gica de polen reciente y f\u00f3sil del IGLUNAM. \n 21 records from BUT Friesner Herbarium. \n 2 records from Natagriwal ; Observations made from operations within Natura 2000 habitats and other semi-natural areas. \n 1 records from Sistematizaci\u00f3n del Herbario Nacional Forestal Bi\u00f3l Luciano Vela G\u00e1lvez. \n 1 records from SWECO. \n 5 records from Herbario de Plantas Vasculares de la Asociaci\u00f3n BIGA para el estudio del patrimonio natural de Galicia: FBIGA. \n 2 records from Herbarium Erlangense. \n 1 records from Fusi\u00f3n y actualizaci\u00f3n de las bases de datos del Herbario de la Facultad de Ciencias, UNAM (FCME), Guerrero. \n 2 records from National Trust for Scotland Species Records. \n 516 records from Vascular plant field notes, NTNU University Museum. \n 1 records from Vascular plants in Danish coastal meadows. \n 2768 records from Finnish Floristic Database (Finnish Museum of Natural History Collections). \n 25 records from Geneva Herbarium \u2013 General Collection (G). \n 3 records from Welsh BSBI data (ex-VPDB dataset) at hectad resolution. \n 3 records from Nijmegen Natural History Museum (NL) - Herbarium. \n 5 records from BRERC species records within last 15 years. \n 130 records from Some Plant Specimens from PE Herbarium in China from 1900 to 1950. \n 115 records from CAS Botany (BOT). \n 1 records from University of Graz, Institute of Plant Sciences - Herbarium GZU. \n 3 records from National Museum of Natural Science. \n 2 records from Herbarium specimens of Limoges university (LIMO). \n 4 records from PACA-AGP - Herbarium Anchieta. 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Semi-quantitative qPCR data of the titration study to assess the degree of miRNA expression after various dosages of miR-mimic oligonucleotide (n =\u20092 per dose). For each miRNA the level of overexpression was determined either 1 week after receiving a 150, 75 or 15 pmol dose (green dots), or after 48 h (blue squares) when receiving either a 15 pmol dose (miR-142a-5, miR-146a-5p), or a 1.5\u20130.0015 pmol dose (all others). As expected, overexpression levels of miR-142a-5p and miR-146a-5p are higher 48 h than 1 week after infusion. Fold changes per dose are expressed in comparison to the expression levels of the miRNA in negative control infused mice (see Methods). 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A measurement of the cross section for the production of isolated prompt photons in pp collisions at a center-of-mass energy sqrt(s) = 7 TeV is presented. The results are based on an integrated luminosity of 4.6 fb-1 collected with the ATLAS detector at the LHC. The cross section is measured as a function of photon pseudorapidity and transverse energy in the kinematic range between 100 GeV and 1000 GeV and in the regions of pseudorapidity less than 1.37 and between 1.52 and 2.37. The results are compared to leading-order parton-shower Monte Carlo models and next-to-leading-order perturbative QCD calculations. 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Het aangetroffen materiaal is namelijk vrij beperkt ten opzichte van nederzettingskernen als bekend uit andere donkopgravingen in de regio. Wel toont het aangetroffen materiaal duidelijk aan dat er bewoning van de donk heeft plaatsgevonden ten tijde van de neolithische Swifterbant-cultuur, en wel meer specifiek in de fase Hazendonk 2 (ca. 4000-3700 cal BC). Het grotendeels verbrande botafval en de aardewerkscherven met aankoeksel kunnen eenduidig als keukenafval worden geïnterpreteerd, terwijl de (micro)debitage en de aanwezigheid van een kern op lokale vuursteenbewerking\nwijst. De vondst van een pijlspits wijst erop dat er jacht zal hebben plaatsgevonden en de vondst van enkele krabbers wijst mogelijk op de bewerking van huiden, e.d.\nDe vindplaats is met name interessant omdat juist de Hazendonk 2-fase nog weinig onderzocht is. 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cultuur","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}},{"value":"Oral history","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}},{"value":"Temporal coverage: 1934-2010","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}},{"value":"Social 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Ik kom uit een gezin van drie. Van het ouderlijk gezin ben ik alleen naar Indonesië gekomen, omdat ik ben meegenomen door degene die mij heeft opgevoed: een 'jaji' (scheepsgenoot) van mijn ouders. \n \n
Ik ben tot en met de derde klas van de lagere school naar school geweest. Mijn ouders stuurden mij niet van harte naar school. Waarom zou je naar school gaan, 'namat' (districtshoofd) wordt je toch niet, zo werd er gedacht.  De overheid in Suriname dwingt je om naar school te gaan, de politie kon op je af worden gestuurd. Dat was een donkere man, ik was bang voor hem. \n \n

Toen wij aankwamen in Tongar was dit allemaal rimboe. Ik was 26, dus heb ik meegeholpen aan het openkappen van het bos. Mijn ouders wilden huilen, maar hielden zich in. Ze geneerden zich ervoor. Ik kon niet huilen. Er waren mensen die helemaal in de war raakten. Pak Samingoen bijvoorbeeld  en Pak Wongso ook. Pak Wongso was een rijke handelaar geweest in Suriname, hij hoorde tot de ervaren mensen. Je zou kunnen zeggen dat de stress toesloeg. \n \nDe eerste maand kregen wij rantsoen van de Stichting en begonnen we aan het openmaken van het bos. Toen wij konden beginnen met planten, probeerden wij rijst. Niet op een 'sawa' (rijstveld), maar op droge grond. De 'bibit' (plantjes) kochten wij in Pasaman. Het planten ging niet met de ploeg, maar met de 'cangkul'  (houweelachtig gereedschap om de grond om te woelen). Hoeveel kon je uit een oogst halen? Niet veel, maar het was beter dan niets. Zij die ervaring hadden, zochten hun geluk ergens anders, maar mensen zoals ik die niets konden laten zien, waren gedoemd om in Tongar te blijven. \n \n
Volgens de belofte zouden wij per gezin 5 hectare grond krijgen. Die grond hebben wij van de voorouders van de mensen van dit gebied gehad. Ze hebben ons goed ontvangen. Ze hebben een 'kersouw' voor ons geslacht . Sutan Laut Api was het hoofd van hier en Pak Hatta was gekomen voor de plechtigheid. Ik heb 2 hectare gehad. Wat er met de rest van de grond is gebeurd, weet ik niet. Er is wel 1500 hectare Stichtingsgrond hier in Tongar. Of het verkocht, verhuurd of weggegeven is, weet niemand. Ik heb mijn grond verdeeld onder de kinderen om er een huis op te bouwen. Dat laat ik voor hen achter en voor mijn kleinkinderen. \n \n
Ik heb geen contact meer met mijn ouders en broers in Suriname. Het contact was eigenlijk al voor mijn vertrek vanuit Suriname verbroken, omdat zij zich hadden aangesloten bij de andere partij, de KTPI. De partijpolitiek was erg confronterend in die tijd. Men maakte zich kwaad over dingen die over en weer van elkaar werden gezegd. Zo zei men: ‘Als het de PBIS lukt om naar Indonesië te gaan, dan zal ik naakt op straat lopen’. Als ik er aan denk, voel ik me droevig dat het zo is gegaan met de familie, maar er is geen weg terug. Wat heeft het voor zin om spijt te hebben, terwijl je het niet meer goed kunt maken. Je kunt het vergelijken met een vogel die zijn vleugels niet meer heeft, maar nog graag wil vliegen. 
 \n \nIk was vroeger een 'pelawak' (clown, grappenmaker) en speelde ook de rol van Semar bij 'wajang wong' (toneel met spelers en dansers).  Ik leerde het van de ouderen die hun kennis hadden meegenomen uit Java. Het Javaans wordt nog gesproken in Suriname, er zijn mensen die het ook 'halus' (verfijnd, beleefd) kunnen spreken. \n \n
In Suriname was destijds de Javaanse cultuur niet verloren gegaan. Je had veel 'kumpulan kesenian' (kunstgezelschappen). Er is daar nog 'wajang', hier niet. 'Ludruk'-groepen (volkstoneel) waren er ook. Vroeger oefenden wij niet elke dag, maar een keer per week of een keer in de maand. 'Orang negro' (Creolen) waren er ook die meededen en die ook van 'wajang' hielden. Er waren zelfs 'orang belanda' (Nederlanders) die 'wajang' konden spelen.  Tot de jaren ’70 van de vorige eeuw was er hier in Tongar ook nog 'ludruk', maar dat is er nu niet meer. Hier speelde ik ook, de mensen vonden het leuk als ik op het toneel verscheen als 'lawaai' (clown, grappenmaker). \n \n
Ik heb 11 kinderen en volgens mij heb ik bij elkaar 20 kleinkinderen. Mijn kinderen kunnen allemaal Javaans spreken, enkelen zelfs ook het fijne Javaans (hoog-Javaans), maar de kleinkinderen niet meer. 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E.M. ten","name":"E. M. Ten","surname":"Broeke","rank":1,"pid":[],"affiliation":[]}],"resulttype":{"classid":"dataset","classname":"dataset","schemeid":"dnet:result_typologies","schemename":"dnet:result_typologies"},"language":{"classid":"nl","classname":"nl","schemeid":"dnet:languages","schemename":"dnet:languages"},"country":[],"subject":[{"value":"Infrastructuur - Kanaal/vaarweg (IKAN)","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}},{"value":"Nieuwe tijd: 1500 - heden (NT)","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}},{"value":"Archaeology","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}}],"title":[{"value":"Archeologisch bureauonderzoek en gecombineerd verkennend en karterend booronderzoek Hoofdstraat 79 te Apeldoorn in de gemeente Apeldoorn","qualifier":{"classid":"main title","classname":"main title","schemeid":"dnet:dataCite_title","schemename":"dnet:dataCite_title"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}}],"relevantdate":[],"description":[{"value":"Gespecificeerde archeologische verwachting\nUit het bureauonderzoek blijkt dat het plangebied een landschappelijke ligging heeft op een relatief hooggelegen en van west naar oost (flauw) hellende daluitspoelingswaaier. In de omgeving van het plangebied komen van zuidwest naar noordoost lopende dalvormige laagten voor, met daarin beekdalen zoals het ten zuiden/zuidoosten van het plangebied gelegen beekdal van De Grift. De van nature voldoende gedraineerde gronden van de daluitspoelingswaaier zullen in principe al voor Jagers-Verzamelaars (Laat-Paleolithicum en Mesolithicum) een gunstige ligging hebben gehad als tijdelijke nederzettingslocatie (jachtkampementen). Vanaf het Neolithicum zal het plangebied ook geschikt zijn geweest als nederzettingslocatie voor Landbouwers. Met het ontstaan van Apeldoorn gaat het plangebied deel uitmaken van deze (laat)middeleeuwse dorpskern. Geraadpleegd historisch kaartmateriaal geeft aan dat door het noordwestelijke deel de blusbeek de Leigraaf heeft gelopen. Tijdens de bouw van de direct ten westen van het plangebied gelegen Oranjerie is een deel van de gedempte blusbeek de Leigraaf aangetroffen, met in het dempingsmateriaal vooral Nieuwe tijd resten.\n\nHet plangebied heeft een middelhoge verwachting voor het aantreffen van archeologische resten van Jagers-Verzamelaars en laatprehistorische Landbouwers (Laat-Paleolithicum t/m Romeinse tijd), maar verwacht wordt dat eventueel aanwezige resten uit deze perioden reeds verstoord/vergraven zijn tijdens bewerking van de bodem in de Middeleeuwen/Nieuwe tijd. Juist vanwege de ligging van het plangebied binnen de (laat)middeleeuwse dorpskern van Apeldoorn is de kans hoog op het voor-komen van resten uit de (Late-)Middeleeuwen en Nieuwe tijd. Archeologische resten uit deze perioden werden verwacht in de bewerkte grond/oude woongrond. Voor het uiterst noordwestelijke deel van het plangebied werd specifiek dempingsmateriaal verwacht. Te verwachten archeologische resten zijn voornamelijk aardewerkfragmenten. \n\nResultaten inventariserend veldonderzoek\nUit de resultaten van het inventariserend veldonderzoek (IVO, verkennende fase direct gecombineerd met de karterende fase) blijkt dat binnen het plangebied de bodemopbouw, onder de aanwezige klin-kerverharding en cunet-/stabilisatiezand, tussen gemiddeld 40 en 150 cm -mv uit geroerde/verstoorde lagen bestaat. Mogelijk betreft het deels gestort humeus zand of plaggendek als ophogingslaag. De samenstelling van de geroerde/verstoorde lagen kunnen in het algemeen beschreven worden als donkerzwartgrijs tot beigebruin gekleurd, zwak tot sterk humeus, zwak grindig, zwak tot sterk siltig, matig grof zand. De onverstoorde bodem betreft direct de C-horizont, bestaande uit witbeige gekleurd, zwak grindig, zwak siltig, matig fijn tot matig grof zand. Het oorspronkelijke moedermateriaal betreft daluitspoelingswaaierafzettingen (sneeuwsmeltwaterafzettingen). De slechte sortering en het voorkomen van grind en zijn hiervoor kenmerkend. Het bevestigt de ligging van het plangebied binnen een daluitspoelingswaaier. Wat de oorspronkelijke bodemopbouw binnen het plangebied is geweest wordt op basis van de boringen niet duidelijk, aangezien restanten hiervan niet zijn aangetroffen.\n\nDoor de ligging van het plangebied binnen de historische kern van Apeldoorn zullen bodemverstoringen ingrepen ook hebben plaatsgevonden mogelijk al vanaf het einde van de Late-Middeleeuwen en zeker in de Nieuwe tijd. (Sub)recentelijk zijn ook bodemverstorende ingrepen uitgevoerd, vanwege de vele aangetroffen resten baksteen en bouwpuin van (sub)recente ouderdom (19e/20e eeuw). \n\nVoor het noordwestelijke deel van het plangebied, daar waar de blusbeek de Leigraaf heeft gelegen, betreft het geroerde/verstoorde deel van de bodem waarschijnlijk dempingsmateriaal. In het onderste deel van het dempingsmateriaal zijn een fragment roodbakkend geglazuurd aardewerk en een pij-pensteeltje aangetroffen, daterend uit de 18e/19e eeuw. Deze resten zijn vergelijkbaar met eerder aangetroffen resten door de AWA tijdens de bouw van de Oranjerie. De voormalige loop van de blus-beek de Leigraaf, door het noordwestelijke deel van het plangebied, lijkt hiermee te worden bevestigd. Verder zijn er geen archeologische resten aangetroffen die duiden op de aanwezigheid van een archeologische vindplaats ouder dan Nieuwe tijd.\n\nConclusie\nIn principe kan geconcludeerd worden dat er sprake is van een archeologische vindplaats in het noordwestelijke deel van het plangebied, daar waar een deel van de gedempte sloot/watergang van de blusbeek de Leigraaf ligt. De gespecificeerde archeologische verwachting, zoals die is weergegeven tijdens het bureauonderzoek, wordt voor dit deel van het plangebied door het booronderzoek dan ook bevestigd. Indien er door de voorgenomen ingreep (uitbreiding van een winkelpand) graafwerkzaamheden worden uitgevoerd tot in/op het gele zand (top van de C-horizont), dan zal de gedempte sloot/watergang (het dempingsmateriaal en bodem van de sloot/watergang) worden ver-stoord/weggegraven. Hierbij dient opgemerkt worden dat het oppervlak van het terreindeel waar een deel van de voormalige sloot/watergang van de Leigraaf ligt, naar verwachting vrij beperkt zal zijn. Tevens is de slootdemping (en daarmee ook de contouren van de Leigraaf) op een hoger niveau aanwezig. Aanvullend onderzoek is al noodzakelijk indien de graafwerkzaamheden dieper reiken dan onderkant bouwvoor.\n \nVoor het overige deel/merendeel van het plangebied wordt geconcludeerd dat er, vanwege de recent verstoorde bodemopbouw (op basis van de bijmenging van recent bouwpuin en baksteen) en het verder ontbreken van archeologisch relevante indicatoren, geen aanleiding meer is voor de aanwezigheid van een archeologische vindplaats.\n\nSelectieadvies\nOp grond van de resultaten van het inventariserend veldonderzoek geldt in principe het advies om voor het noordwestelijke deel van het plangebied een vervolgonderzoek te laten uitvoeren. Behoud van de vermoedelijk aanwezige archeologische vindplaats, in de vorm een restant van een deel van de loop van de blusbeek de Leigraaf, zal niet mogelijk zijn bij een niet aangepaste uitvoering van de huidige plannen (graafwerkzaamheden tot aan de huidige top van de C-horizont/verwijderen van de humeuze bovenlaag, ten behoeve van de aanleg van de fundering en nutsvoorzieningen). Vanwege de naar verwachting beperkte oppervlakte waar een deel van de voormalige loop van de blusbeek zal liggen, en de huidige situatie van het plangebied en de directe omgeving, kan als alternatief beter gekozen worden voor een archeologische begeleiding van de 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ArcheoProjecten","name":"Archeoprojecten","surname":"Adc","rank":1,"pid":[],"affiliation":[]},{"fullname":"Lil, R. van","name":"R.","surname":"Lil","rank":2,"pid":[],"affiliation":[]}],"resulttype":{"classid":"dataset","classname":"dataset","schemeid":"dnet:result_typologies","schemename":"dnet:result_typologies"},"language":{"classid":"nl","classname":"nl","schemeid":"dnet:languages","schemename":"dnet:languages"},"country":[],"subject":[{"value":"Archeologisch: bureauonderzoek","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}},{"value":"Archaeology","qualifier":{"classid":"keyword","classname":"keyword","schemeid":"dnet:subject_classification_typologies","schemename":"dnet:subject_classification_typologies"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}}],"title":[{"value":"Roermond Steenweg 14 BO","qualifier":{"classid":"main title","classname":"main title","schemeid":"dnet:dataCite_title","schemename":"dnet:dataCite_title"},"dataInfo":{"invisible":false,"inferred":false,"deletedbyinference":false,"trust":"","inferenceprovenance":"","provenanceaction":{"classid":"","classname":"","schemeid":"","schemename":""}}}],"relevantdate":[],"description":[{"value":"In opdracht van de heer F. Curvers heeft ADC ArcheoProjecten een bureauonderzoek uitgevoerd voor het plangebied Steenweg 14 in Roermond. In het plangebied zal een aanbouw bij een winkelpand worden gerealiseerd. Het onderzoek is uitgevoerd om te bepalen of de nieuwbouw een bedreiging kan vormen voor archeologische resten in de ondergrond.\n\nHet onderzoek heeft uitgewezen dat in het plangebied behoudenswaardige bewoningsresten uit de late Middeleeuwen en de Nieuwe tijd verwacht kunnen worden. De verwachte resten bestaan uit grondsporen van laatmiddeleeuwse houtbouw, afvalkuilen, water- en beerputten, gemetselde muurtjes, greppels en overblijfselen van ambachtelijke activiteiten. Deze resten kunnen in het hele plangebied worden aangetroffen in en onder ophogingslagen. De dikte van deze lagen en daarmee de diepteligging van de archeologische resten is in dit stadium nog niet bekend. Naast laatmiddeleeuwse en nieuwetijdse bewoningresten is ook de aanwezigheid van bewonings- of resten van begravingen uit pre- of protohistorische perioden niet uitgesloten.\n\nADC ArcheoProjecten adviseert om een inventariserend veldonderzoek uit te voeren door middel van het aanleggen van proefsleuven (IVO-P), teneinde de aanwezigheid, gaafheid, omvang, datering en conservering van archeologische resten te onderzoeken. Gezien de beperkte omvang van het plangebied kan de proefsleuf het gehele oppervlak van het plangebied beslaan. Na een evaluatie van de resten die tijdens dit onderzoek worden aangetroffen kan het bevoegd gezag besluit nemen omtrent de vervolgstappen. Deze kunnen bestaan uit behoud van de resten in de bodem (behoud in situ) of het opgraven van de aanwezige resten. Voorafgaand aan een dergelijk onderzoek moet een Programma van Eisen worden geschreven waarin de exacte invulling van de werkzaamheden is omschreven. Ten behoeve van het PvE is het raadzaam om in eerste instantie een booronderzoek uit te voeren om de dikte en opbouw van het vrijwel zeker aanwezige pakket aan ophogingslagen vast te 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set up a data archive in which old, current and future data can be brought together, and to set new standards for future data collection. This will broaden and redefine the research agenda in language and speech pathology and the emphasis on a multitude of data will trigger multidisciplinary studies. The research groups involved have agreed to continue their efforts to create the VALID data archive and are supported by their research institutes. All data sets will be available for other researchers and additional research.;\n ;\n ;\n ;Frog story - The children were asked to flip through all pictures in the book before starting their narration. This was done to give them an overall idea of what was coming in order not to overload working memory when actually performing the narrative task itself. The experimenter then labeled the boy, the dog and the frog, and pointed at them. She then asked the children to look at the pictures again in sequence and while so doing to tell the story in their own words. She pretended to not know the story and made it clear that she could not see the pictures in the book herself. Feedback was given as little as possible. To be sure that the story had been well understood by the children, some comprehension questions were asked afterwards. All children were able to answer these questions. ;Aim data collection: Finding out whether there is a link between executive function and language, both in children with ADHD and in children with SLI. All tests are performed by 26 children diagonosed with ADHD (combined and mainly hyperactive impulsive subtypes) and two control groups, consisting of 22 normal developing children, 19 children with SLI. All children in the age range 7;0-8;11, 81% male and 19% female. Two types of test are distinguished, language tasks and neuro-psychological tasks. LANGUAGE TASKS: (1) NARRATIVE TASK: written scriptlog accounts of frog story (2) REPETITION TASK: Sentence imitation task (ZIT) and non-word repetition task. (3) LANGUAGE QUESTIONNAIRE: children communication checklist-II (Bishop (2003)) NEURO-PSYCHOLOGICAL TASKS: 6 tests from the CANTAB testing battery: (1) MOT (control test), (2) BLC (control test), (3) SST, (4) SWM, (5) SOC, (6) IED and one non-verbal fluency test: 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We also study the different information available in children's pain management.\n\nPurpose of our study is to identify what medicinal pain treatments children's nursing is and how to treat pain in pediatric patients in emergency care. The goal is to get new information that would be useful to any of paramedics in training sessions and nursing staff who are working with the pediatric patients.\n\nOur study deals with children's pain management in emergency care and the different challenges it sets to paramedic. We describe the thesis work of children in various stages of development, anatomical and physiological characteristics that the paramedic should be aware of pediatric patients encountering. We will examine the thesis work which challenges the pediatric patient encounter and examination of primary care brings pain. The child is experiencing pain in the same way as an adult. 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A possible option to improve the autonomic control is the inspiratory muscle training (IMT). The aim of this study was to systematically review the available literature about the effects of this training modality on autonomic control. A search was performed for controlled and randomized clinical trials on database MEDLINE, PEDro, SciELO and LILACS by two independent reviewers, who also evaluated the methodologic quality (PEDro scale). 181 articles were found and, after elegibility criteria analysis, four studies were included. The included studies showed good methodological quality and assessed the effect of IMT on the autonomic control of participants with risk factors for cardiovascular disease. The autonomic control was evaluated by heart rate variability (HRV) analysis and by noradrenaline plasma levels. 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Whilst recent years have seen the emergence of clinical and empirical reports delineating the profile of young autistic girls, recognition of sex differences in symptomatology in adulthood is far more limited. Methods We chose here to focus on symptomatology as reported using a screening instrument, the Ritvo Autism Asperger Diagnostic Scale-Revised (RAADS-R). In a meta-analysis, we pooled and analysed RAADS-R data from a number of experimental groups. Analysis of variance (ANOVA) searched for the presence of main effects of Sex and Diagnosis and for interactions between these factors in our sample of autistic and non-autistic adults. Results In social relatedness and circumscribed interests, main effects of Diagnosis revealed that as expected, autistic adults reported significantly greater lifetime prevalence of symptoms in these domains; an effect of Sex, in circumscribed interests, also suggested that males generally reported more prevalent symptoms than females. An interaction of Sex and Diagnosis in language symptomatology revealed that a normative sex difference in language difficulties was attenuated in autism. An interaction of Sex and Diagnosis in the sensorimotor domain revealed the opposite picture: a lack of sex differences between typically developing men and women and a greater prevalence of sensorimotor symptoms in autistic women than autistic men. Conclusions We discuss the literature on childhood sex differences in relation to those which emerged in our adult sample. Where childhood sex differences fail to persist in adulthood, several interpretations exist, and we discuss, for example, an inherent sampling bias that may mean that only autistic women most similar to the male presentation are diagnosed. The finding that sensorimotor symptomatology is more highly reported by autistic women is a finding requiring objective confirmation, given its potential importance in diagnosis."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2018-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": 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Signaling by HAE/HSL2 leads to expression of genes encoding secreted cell wall remodeling and hydrolase enzymes. hae hsl2 mutants fail to induce expression of these genes and retain floral organs indefinitely. Mutants in the gene NEVERSHED (NEV) also fail to abscise floral organs and phenotypically resemble hae hsl2. NEV encodes an ADP-ribosylation factor GTPase-activating protein that localizes to the trans-Golgi network and early endosome. nev displays altered Golgi morphology and aberrations in vesicular trafficking. The mechanism by which nev fails to abscise is presently unknown. It has been hypothesized that nev fails to activate HAE/HSL2 signaling. In this study we use RNA-Sequencing to test this hypothesis. Results We show that the transcriptional alterations in hae hsl2 and nev are highly divergent. hae hsl2 displays a clear reduction in expression of genes associated with cell wall remodeling and pectin degradation, while nev displays vast transcriptional changes associated with response to pathogens. 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Whilst recent years have seen the emergence of clinical and empirical reports delineating the profile of young autistic girls, recognition of sex differences in symptomatology in adulthood is far more limited. Methods We chose here to focus on symptomatology as reported using a screening instrument, the Ritvo Autism Asperger Diagnostic Scale-Revised (RAADS-R). In a meta-analysis, we pooled and analysed RAADS-R data from a number of experimental groups. Analysis of variance (ANOVA) searched for the presence of main effects of Sex and Diagnosis and for interactions between these factors in our sample of autistic and non-autistic adults. Results In social relatedness and circumscribed interests, main effects of Diagnosis revealed that as expected, autistic adults reported significantly greater lifetime prevalence of symptoms in these domains; an effect of Sex, in circumscribed interests, also suggested that males generally reported more prevalent symptoms than females. An interaction of Sex and Diagnosis in language symptomatology revealed that a normative sex difference in language difficulties was attenuated in autism. An interaction of Sex and Diagnosis in the sensorimotor domain revealed the opposite picture: a lack of sex differences between typically developing men and women and a greater prevalence of sensorimotor symptoms in autistic women than autistic men. Conclusions We discuss the literature on childhood sex differences in relation to those which emerged in our adult sample. Where childhood sex differences fail to persist in adulthood, several interpretations exist, and we discuss, for example, an inherent sampling bias that may mean that only autistic women most similar to the male presentation are diagnosed. The finding that sensorimotor symptomatology is more highly reported by autistic women is a finding requiring objective confirmation, given its potential importance in diagnosis."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2018-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": 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Often, the expected small number of differentially methylated cytosine-guanine pairs (CpGs) in studies of the human methylome presents a statistical challenge, as the large number of CpGs measured on the 450K necessitates careful multiple test correction. While the 450K is a highly useful tool for population epigenetic studies, many of the CpGs tested are not variable and thus of limited information content in the context of the study and tissue. CpGs with observed lack of variability in the tissue under study could be removed to reduce the data dimensionality, limit the severity of multiple test correction and allow for improved detection of differential DNA methylation. Methods Here, we performed a meta-analysis of 450K data from three commonly studied human tissues, namely blood (605 samples), buccal epithelial cells (121 samples) and placenta (157 samples). We developed lists of CpGs that are non-variable in each tissue. Results These lists are surprisingly large (blood 114,204 CpGs, buccal epithelial cells 120,009 CpGs and placenta 101,367 CpGs) and thus will be valuable filters for epigenetic association studies, considerably reducing the dimensionality of the 450K and subsequently the multiple testing correction severity. Conclusions We propose this empirically derived method for data reduction to allow for more power in detecting differential DNA methylation associated with exposures in studies on the human methylome."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], 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"schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background We have previously showed that the carotenoid fucoxanthin can increase the lifespan in Drosophila melanogaster and Caenorhabditis elegans. However, the molecular mechanisms of the geroprotective effect of fucoxanthin have not been studied so far. Results Here, we studied the effects of fucoxanthin on the Drosophila aging process at the molecular and the whole organism levels. At the organismal level, fucoxanthin increased the median lifespan and had a positive effect on fecundity, fertility, intestinal barrier function, and nighttime sleep. Transcriptome analysis revealed 57 differentially expressed genes involved in 17 KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways. Among the most represented molecular pathways induced by fucoxanthin, a significant portion is related to longevity, including MAPK, mTOR, Wnt, Notch, and Hippo signaling pathways, autophagy, translation, glycolysis, oxidative phosphorylation, apoptosis, immune response, neurogenesis, sleep, and response to DNA damage. Conclusions Life-extending effects of fucoxanthin are associated with differential expression of longevity-associated genes."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2018-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["10.6084/m9.figshare.c.4001994"], "contactperson": [], "source": [], "context": [], "title": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "main title", "classname": "main title", "schemeid": "dnet:dataCite_title", "schemename": "dnet:dataCite_title"}, "value": "Transcriptome analysis reveals mechanisms of geroprotective effects of fucoxanthin in Drosophila"}]} +{"dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:repository", "classname": "sysimport:crosswalk:repository", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": "dedup-similarity-result-levenstein", "invisible": false, "trust": "0.9"}, "resourcetype": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "pid": [], "contributor": [{"dataInfo": {"provenanceaction": 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"schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}, "processingchargeamount": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "instancetype": {"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract We applied the epidemic type aftershock sequence (ETAS) model, the two-stage ETAS model and the non-stationary ETAS model to investigate the detailed features of the series of earthquake occurrences before and after the M6.7 Hokkaido Eastern Iburi earthquake on 6 September 2018, based on earthquake data from October 1997. First, after the 2003 M8.0 Tokachi-Oki earthquake, seismic activity in the Eastern Iburi region reduced relative to the ETAS model. During this period, the depth ranges of the seismicity were migrating towards shallow depths, where a swarm cluster, including a M5.1 earthquake, finally occurred in the deepest part of the range. This swarm activity was well described by the non-stationary ETAS model until the M6.7 main shock. The aftershocks of the M6.7 earthquake obeyed the ETAS model until the M5.8 largest aftershock, except for a period of several days when small, swarm-like activity was found at the southern end of the aftershock region. However, when we focus on the medium and larger aftershocks, we observed quiescence relative to the ETAS model from 8.6\u00c2 days after the main shock until the M5.8 largest aftershock. For micro-earthquakes, we further studied the separated aftershock sequences in the naturally divided aftershock volumes. We found that the temporal changes in the background rate and triggering coefficient (aftershock productivity) in respective sub-volumes were in contrast with each other. In particular, relative quiescence was seen in the northern deep zones that includes the M5.8 largest aftershock. Furthermore, changes in the b-values of the whole aftershock activity showed an increasing trend with respect to the logarithm of elapsed time during the entire aftershock period, which is ultimately explained by the spatially different characteristics of the aftershocks."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2019-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": 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Neuheit, so die zugrundeliegende Annahme des Forschungsprogramms, bildet den Kern von Innovationen und entsteht aus kulturellen Quellen, die als kulturelle Konfigurationen analysiert werden. Die Relevanz dieser kulturellen Konstellationen f\u00fcr das Innovationsgeschehen - im Unterschied zu technischen oder politischen Aspekten - ist der Gegenstand der Forschung. Dabei gelten drei Prozesse als entscheidend f\u00fcr die Qualit\u00e4t und Anschlussf\u00e4higkeit von Innovationen: 1) die st\u00e4ndige Variation kultureller Selbstverst\u00e4ndlichkeiten, 2) Prozesse der Bewertung als Neuheit und 3) Spannungszust\u00e4nde, die in und zwischen Kulturen auftreten. Das Zusammenspiel dieser drei Prozesse, so die These, bestimmt das Spektrum und die Reichweite der Innovationen. Die empirischen Felder des Forschungsprogramms sind aus der r\u00e4umlichen, interaktiven und zeitlichen Dimensionierung kultureller Konfigurationen hergeleitet. In jedem der Felder untersuchen die Projekte Ph\u00e4nomene unterschiedlicher Gr\u00f6\u00dfenordnung.\" (Autorenreferat)\n\"The discussion paper develops, in its first part, the research program of the unit. The second\npart of the paper presents six projects, as well as two dissertations linked to the program.\nIt is assumed that newness is at the core of innovations and emerges in cultural configurations\nwhich are identified as cultural sources. The relevance of such cultural factors, as\nopposed to the influence of technical or political aspects, is the focus of research. Three\nkinds of processes determine the quality and the connectivity of innovations: 1) the\ncontinuous variation of shared cultural semantics and practices, 2) processes of evaluating\nnewness and 2) states of tension in and between cultures. The interplay of these three\nprocesses, it is argued, determines the spectrum and the spread of successful innovations.\nThe empirical streams of the research program are deduced from the spatial, interactive and\ntemporal dimension of cultural configurations. 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"inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background Molecular characterization is important for efficient utilization of germplasm and development of improved varieties. In the present study, we investigated the genetic purity, relatedness and population structure of 265 maize inbred lines from the Ethiopian Institute of Agricultural Research (EIAR), the International Maize and Wheat Improvement Centre (CIMMYT) and the International Institute of Tropical Agriculture (IITA) using 220,878 single nucleotide polymorphic (SNP) markers obtained using genotyping by sequencing (GBS). Results Only 22% of the inbred lines were considered pure with <5% heterogeneity, while the remaining 78% of the inbred lines had a heterogeneity ranging from 5.1 to 31.5%. Pairwise genetic distances among the 265 inbred lines varied from 0.011 to 0.345, with 89% of the pairs falling between 0.301 and 0.345. Only <1% of the pairs had a genetic distance lower than 0.200, which included 14 pairs of sister lines that were nearly identical. Relative kinship analysis showed that the kinship coefficients for 59% of the pairs of lines was close to zero, which agrees with the genetic distance estimates. Principal coordinate analysis, discriminant analysis of principal components (DAPC) and the model-based population structure analysis consistently suggested the presence of three groups, which generally agreed with pedigree information (genetic background). Although not distinct enough, the SNP markers showed some level of separation between the two CIMMYT heterotic groups A and B established based on pedigree and combining ability information. Conclusions The high level of heterogeneity detected in most of the inbred lines suggested the requirement for purification or further inbreeding except those deliberately maintained at early inbreeding level. The genetic distance and relative kinship analysis clearly indicated the uniqueness of most of the inbred lines in the maize germplasm available for breeders in the mid-altitude maize breeding program of Ethiopia. Results from the present study facilitate the maize breeding work in Ethiopia and germplasm exchange among breeding programs in Africa. We suggest the incorporation of high density molecular marker information in future heterotic group assignments."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["10.6084/m9.figshare.c.3903667.v1"], "contactperson": [], "source": [], "context": [], "title": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "main title", "classname": "main title", "schemeid": "dnet:dataCite_title", "schemename": "dnet:dataCite_title"}, "value": "Genetic variation and population structure of maize inbred lines adapted to the mid-altitude sub-humid maize agro-ecology of Ethiopia using single nucleotide polymorphic (SNP) markers"}]} +{"dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:datasetarchive", "classname": "sysimport:crosswalk:datasetarchive", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": "dedup-similarity-result-levenstein", "invisible": false, "trust": "0.9"}, "resourcetype": {"classid": "Collection", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}, "pid": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "doi", "classname": "doi", "schemeid": "dnet:pid_types", "schemename": "dnet:pid_types"}, "value": "10.6084/m9.figshare.1017003.v2"}], "contributor": [], "resulttype": {"classid": "other", "classname": "other", "schemeid": "dnet:result_typologies", "schemename": "dnet:result_typologies"}, "relevantdate": [], "collectedfrom": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}], "id": "50|datacite____::ab0dcc9d379f27a099c0b0adc3af9749", "subject": [], "embargoenddate": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "lastupdatetimestamp": 0, "author": [{"surname": "Wang", "name": "Min", "pid": [], "rank": 1, "affiliation": [], "fullname": "Wang, Min"}, {"surname": "O\u2019connor", "name": "Jingmai K.", "pid": [], "rank": 2, "affiliation": [], "fullname": "Jingmai K. 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"Gianfranco", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Morello, Gianfranco"}, {"surname": "Moreno", "name": "Deywis", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Moreno, Deywis"}, {"surname": "Moreno Lla\u0301cer", "name": "Mari\u0301a", "pid": [], "rank": 1857, "affiliation": [], "fullname": "Moreno Ll\u00e1cer, Mar\u00eda"}, {"surname": "Morettini", "name": "Paolo", "pid": [], "rank": 1858, "affiliation": [], "fullname": "Morettini, Paolo"}, {"surname": "Morii", "name": "Masahiro", "pid": [], "rank": 1859, "affiliation": [], "fullname": "Morii, Masahiro"}, {"surname": "Morin", "name": "Jerome", "pid": [], "rank": 1860, "affiliation": [], "fullname": "Morin, Jerome"}, {"surname": "Morita", "name": "Youhei", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Morita, Youhei"}, {"surname": "Morley", "name": "Anthony Keith", "pid": [], "rank": 1862, "affiliation": [], "fullname": "Morley, Anthony Keith"}, {"surname": "Mornacchi", "name": "Giuseppe", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Mornacchi, Giuseppe"}, {"surname": "Morozov", "name": "Sergey", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Morozov, Sergey"}, {"surname": "Morris", "name": "John", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Morris, John"}, {"surname": "Morvaj", "name": "Ljiljana", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Morvaj, Ljiljana"}, {"surname": "Moser", "name": "Hans-Guenther", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Moser, Hans-Guenther"}, {"surname": "Mosidze", "name": "Maia", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Mosidze, Maia"}, {"surname": "Moss", "name": "Josh", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Moss, Josh"}, {"surname": "Mount", "name": "Richard", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Mount, Richard"}, {"surname": "Mountricha", "name": "Eleni", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Mountricha, 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[], "rank": 1880, "affiliation": [], "fullname": "Muir, Alex"}, {"surname": "Munwes", "name": "Yonathan", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Munwes, Yonathan"}, {"surname": "Murray", "name": "Bill", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Murray, Bill"}, {"surname": "Mussche", "name": "Ido", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Mussche, Ido"}, {"surname": "Musto", "name": "Elisa", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Musto, Elisa"}, {"surname": "Myagkov", "name": "Alexey", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Myagkov, Alexey"}, {"surname": "Myska", "name": "Miroslav", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Myska, Miroslav"}, {"surname": "Nadal", "name": "Jordi", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Nadal, Jordi"}, {"surname": "Nagai", "name": "Koichi", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Nagai, Koichi"}, {"surname": "Nagano", "name": "Kunihiro", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Nagano, Kunihiro"}, {"surname": "Nagasaka", "name": "Yasushi", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Nagasaka, Yasushi"}, {"surname": "Nairz", "name": "Armin Michael", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Nairz, Armin Michael"}, {"surname": "Nakahama", "name": "Yu", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Nakahama, Yu"}, {"surname": "Nakamura", "name": "Koji", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Nakamura, Koji"}, {"surname": "Nakano", "name": "Itsuo", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Nakano, Itsuo"}, {"surname": "Nanava", "name": "Gizo", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Nanava, Gizo"}, {"surname": "Napier", "name": "Austin", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Napier, Austin"}, {"surname": "Nash", "name": "Michael", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Nash, Michael"}, {"surname": "Nation", "name": "Nigel", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Nation, Nigel"}, {"surname": "Nattermann", "name": "Till", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Nattermann, Till"}, {"surname": "Naumann", "name": "Thomas", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Naumann, Thomas"}, {"surname": "Navarro", "name": "Gabriela", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Navarro, Gabriela"}, {"surname": "Neal", "name": "Homer", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Neal, Homer"}, {"surname": "Nebot", "name": "Eduardo", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Nebot, Eduardo"}, {"surname": "Nechaeva", "name": "Polina", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Nechaeva, Polina"}, {"surname": "Negri", "name": "Andrea", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Negri, Andrea"}, {"surname": "Negri", "name": "Guido", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Negri, Guido"}, {"surname": "Nektarijevic", "name": "Snezana", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Nektarijevic, Snezana"}, {"surname": "Nelson", "name": "Andrew", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Nelson, Andrew"}, {"surname": "Nelson", "name": "Silke", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Nelson, Silke"}, {"surname": "Nelson", "name": "Timothy Knight", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Nelson, Timothy Knight"}, {"surname": "Nemecek", "name": "Stanislav", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Nemecek, Stanislav"}, {"surname": "Nemethy", "name": "Peter", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nepomuceno", "name": "Andre Asevedo", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Nepomuceno, Andre Asevedo"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Nesterov", "name": "Stanislav", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Nesterov, Stanislav"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neusiedl", "name": "Andrea", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Neusiedl, Andrea"}, {"surname": "Neves", "name": "Ricardo", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Neves, Ricardo"}, {"surname": "Nevski", "name": "Pavel", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Nevski, Pavel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Hong", "name": "Nguyen Thi", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Hong, Van Nguyen Thi"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nicolas", "name": "Ludovic", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Nicolas, Ludovic"}, {"surname": "Nicquevert", "name": "Bertrand", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Nicquevert, Bertrand"}, {"surname": "Niedercorn", "name": "Francois", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Niedercorn, Francois"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Niinikoski", "name": "Tapio", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Niinikoski, Tapio"}, {"surname": "Nikiforou", "name": "Nikiforos", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Nikiforou, Nikiforos"}, {"surname": "Nikiforov", "name": "Andriy", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Nikiforov, Andriy"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolaev", "name": "Kirill", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Nikolaev, Kirill"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolics", "name": "Katalin", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Nikolics, Katalin"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Henrik", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Nilsen, Henrik"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishiyama", "name": "Tomonori", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Nishiyama, Tomonori"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nodulman", "name": "Lawrence", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Nodulman, Lawrence"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Nordkvist", "name": "Bjoern", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Nordkvist, Bjoern"}, {"surname": "Norton", "name": "Peter", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Norton, Peter"}, {"surname": "Novakova", "name": "Jana", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Novakova, Jana"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozicka", "name": "Miroslav", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Nozicka, Miroslav"}, {"surname": "Nozka", "name": "Libor", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Nozka, Libor"}, {"surname": "Nugent", "name": "Ian Michael", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Nugent, Ian Michael"}, {"surname": "Nuncio-Quiroz", "name": "Adriana-Elizabeth", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Nuncio-Quiroz, Adriana-Elizabeth"}, {"surname": "Nunes Hanninger", "name": "Guilherme", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Nunes Hanninger, Guilherme"}, {"surname": "Nunnemann", "name": "Thomas", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Nunnemann, Thomas"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nyman", "name": "Tommi", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Nyman, Tommi"}, {"surname": "O Brien", "name": "Brendan Joseph", "pid": [], "rank": 1958, "affiliation": [], "fullname": "O'Brien, Brendan Joseph"}, {"surname": "O Neale", "name": "Steve", "pid": [], "rank": 1959, "affiliation": [], "fullname": "O'Neale, Steve"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1960, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1961, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Ohshita", "name": "Hidetoshi", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Ohshita, Hidetoshi"}, {"surname": "Ohska", "name": "Tokio Kenneth", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Ohska, Tokio Kenneth"}, {"surname": "Ohsugi", "name": "Takashi", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Ohsugi, Takashi"}, {"surname": "Okada", "name": "Shogo", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Okada, Shogo"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olcese", "name": "Marco", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Olcese, Marco"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1988, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Omachi", "name": "Chihiro", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Omachi, Chihiro"}, {"surname": "Onofre", "name": "Antonio", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Onofre, Antonio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlov", "name": "Iliya", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Orlov, Iliya"}, {"surname": "Oropeza Barrera", "name": "Cristina", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Oropeza Barrera, Cristina"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Ospanov, Rustem"}, {"surname": "Osuna", "name": "Carlos", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Osuna, Carlos"}, {"surname": "Otero Y Garzon", "name": "Gustavo", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Otero Y Garzon, Gustavo"}, {"surname": "Ottersbach", "name": "John", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Ottersbach, John"}, {"surname": "Ouchrif", "name": "Mohamed", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Ouchrif, Mohamed"}, {"surname": "Ould-Saada", "name": "Farid", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Ould-Saada, Farid"}, {"surname": "Ouraou", "name": 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On a un pommier en fruit et un dattier qui porte ses r\u00e9gimes. Une personne ramasse d'ailleurs des dattes sur le palmier, repr\u00e9sent\u00e9 avec deux gourmands. Une autre grimpe au pommier. Une charrette est dessin\u00e9e (avec son \u00e2ne et un drapeau \u00e9gyptien \u00e0 l'arri\u00e8re) et une automobile \u00e9galement. Un homme semble juch\u00e9 sur son toit, mais il n'est que qu'\u00e0 c\u00f4t\u00e9. Un oiseau (g\u00e9n\u00e9rique) vole dans le ciel. \u00c0 gauche, ce sont des d\u00e9corations de couleur et une plante ornementale en pot.
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Signaling by HAE/HSL2 leads to expression of genes encoding secreted cell wall remodeling and hydrolase enzymes. hae hsl2 mutants fail to induce expression of these genes and retain floral organs indefinitely. Mutants in the gene NEVERSHED (NEV) also fail to abscise floral organs and phenotypically resemble hae hsl2. NEV encodes an ADP-ribosylation factor GTPase-activating protein that localizes to the trans-Golgi network and early endosome. nev displays altered Golgi morphology and aberrations in vesicular trafficking. The mechanism by which nev fails to abscise is presently unknown. It has been hypothesized that nev fails to activate HAE/HSL2 signaling. In this study we use RNA-Sequencing to test this hypothesis. Results We show that the transcriptional alterations in hae hsl2 and nev are highly divergent. hae hsl2 displays a clear reduction in expression of genes associated with cell wall remodeling and pectin degradation, while nev displays vast transcriptional changes associated with response to pathogens. 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However, the ways in which condom use peer norms and self-efficacy play a role in the association between community engagement and condom use is unclear. This study examines the potential mediating roles of peer norms and self-efficacy in this association. Methods A nationwide cross-sectional online survey was conducted among Chinese MSM in 2015. Recruitment criteria included being born biologically male, being older than 16 years, having had anal sex with a man at least once during their lifetime, and having had condomless anal or vaginal sex in the past three months. Mplus 6.11 was used to conduct confirmatory factor analysis and path modeling analysis to examine the structural relationships between HIV/sexual health community engagement (e.g., joining social media and community events related to HIV and sexual health services), condom use peer norms, condom use self-efficacy, and frequency of condom use. Results The study found that HIV/sexual health community engagement, condom use peer norms, condom use self-efficacy, and frequency of condom use were mutually correlated. A good data model was achieved with fit index: CFI = 0.988, TLI = 0.987, RMSEA = 0.032, 90% CI (0.028, 0.036). HIV/sexual health community engagement was associated with frequency of condom use, which was directly mediated by condom use peer norms and indirectly through self-efficacy. Conclusion The study suggests that condom use peer norms and self-efficacy may be mediators in the pathway between community engagement and condom use, and suggests the importance of peer-based interventions to improve condom use."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, 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Paying and rewarding credit risk professionals on the basis of reporting fewer provisions or lower loan losses motivate credit risk teams to game the system that work to determine loan loss provisions estimate of banks. While bank credit risk teams are sometimes mesmerised by the short-term benefits of provisions games, they do not care if their behaviour destroys bank value and the informativeness of loan loss provisioning estimates. While it is not difficult for bank managers and analysts to understand that the provisioning process is subject to gaming, few of them understand the costs it pose on banks and how to lower this costs. This paper explains how this happens and how provisions games can be stopped or reduced. Using the magnitude of loan losses as a basis to determine the compensation to risk professionals or credit risk teams encourages provisions games. 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This zircon U\u2013Pb dating and Hf isotopic study documents multiple Neoarchaean to Palaeoproterozoic tectonothermal events from the meta-igneous complex in the Machollyong \u2018Group\u2019 of the Rangnim Massif. Two tonalitic-trondjemitic gneiss samples record a crystallization age of meta-igneous protoliths at ca. 2.56 Ga and multiple migmatization and metamorphism from 2.52 to 1.85 Ga. A meta-dolerite sample yields a magmatic emplacement age of ca. 1.83 Ga. In situ zircon Hf isotopic data indicate that most zircons from the gneiss samples have \u03b5Hf(t) values from \u201316.9 to + 3.1 and crustal model ages from 2.84 to 3.73 Ga, whereas magmatic zircons from the meta-dolerite dike record \u03b5Hf(t) values from \u20135.2 to + 5.2 and model ages of 2.05\u20132.44 Ga. The first-recognized Neoarchaean tonalitic-trondjemitic migmatite complex in the Rangnim Massif, together with previously identified tonalitic-trondhjemitic-granodioritic (TTG) rocks in the Rimjingang Belt and the coeval counterparts in western Gyeonggi massif, represents the oldest crustal nuclei in the Korean Peninsula. The multiple tectonothermal events in this study present reliable evidence not only for attesting to consanguinity of the basement between the Korean Peninsula and the North China Craton but also for defining the influence scope of the late Palaeoproterozoic orogeny in the Korean Peninsula."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2016-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", 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We exhibit a sufficient condition under which the payoff matrix and the full payoff matrix have the same rank. This generalizes previous results of Angeloni-Cornet and Magill-Quinzii involving only short-term assets. We then derive existence results with assumptions only based on the fundamentals of the economy.; Nous consid\u00e9rons une \u00e9conomie d'\u00e9change avec des march\u00e9s financiers ; le temps et l'incertain sont repr\u00e9sent\u00e9s par un arbre d'\u00e9v\u00e8nements fini et les actifs financiers sont nominaux avec la possibilit\u00e9 d'actifs de long terme. Nous \u00e9non\u00e7ons une condition suffisante pour que la matrice de paiement et la matrice de paiement compl\u00e9t\u00e9e aient le m\u00eame rang. Ceci g\u00e9n\u00e9ralise des r\u00e9sultats ant\u00e9rieurs d'Angeloni-Cornet et de Magill-Quinzii qui ne consid\u00e9raient que des actifs de court terme. 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{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "collectedfrom": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}, "processingchargeamount": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "instancetype": {"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background Community engagement strategies are often integrated in public health interventions designed to promote condom use among men who have sex with men (MSM), a key population for HIV prevention. However, the ways in which condom use peer norms and self-efficacy play a role in the association between community engagement and condom use is unclear. This study examines the potential mediating roles of peer norms and self-efficacy in this association. Methods A nationwide cross-sectional online survey was conducted among Chinese MSM in 2015. Recruitment criteria included being born biologically male, being older than 16 years, having had anal sex with a man at least once during their lifetime, and having had condomless anal or vaginal sex in the past three months. Mplus 6.11 was used to conduct confirmatory factor analysis and path modeling analysis to examine the structural relationships between HIV/sexual health community engagement (e.g., joining social media and community events related to HIV and sexual health services), condom use peer norms, condom use self-efficacy, and frequency of condom use. Results The study found that HIV/sexual health community engagement, condom use peer norms, condom use self-efficacy, and frequency of condom use were mutually correlated. A good data model was achieved with fit index: CFI = 0.988, TLI = 0.987, RMSEA = 0.032, 90% CI (0.028, 0.036). HIV/sexual health community engagement was associated with frequency of condom use, which was directly mediated by condom use peer norms and indirectly through self-efficacy. Conclusion The study suggests that condom use peer norms and self-efficacy may be mediators in the pathway between community engagement and condom use, and suggests the importance of peer-based interventions to improve condom use."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, 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"2018-07-31T04:46:36.445Z", "fulltext": [], "dateoftransformation": "2020-03-11T05:07:06.916Z", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "\"In diesem Discussion Paper wird im ersten Teil das Forschungsprogramm der Abteilung 'Kulturelle Quellen von Neuheit' entwickelt, im zweiten Teil folgen kurze Beschreibungen von insgesamt neun Projekten. Neuheit, so die zugrundeliegende Annahme des Forschungsprogramms, bildet den Kern von Innovationen und entsteht aus kulturellen Quellen, die als kulturelle Konfigurationen analysiert werden. Die Relevanz dieser kulturellen Konstellationen f\u00fcr das Innovationsgeschehen - im Unterschied zu technischen oder politischen Aspekten - ist der Gegenstand der Forschung. Dabei gelten drei Prozesse als entscheidend f\u00fcr die Qualit\u00e4t und Anschlussf\u00e4higkeit von Innovationen: 1) die st\u00e4ndige Variation kultureller Selbstverst\u00e4ndlichkeiten, 2) Prozesse der Bewertung als Neuheit und 3) Spannungszust\u00e4nde, die in und zwischen Kulturen auftreten. Das Zusammenspiel dieser drei Prozesse, so die These, bestimmt das Spektrum und die Reichweite der Innovationen. Die empirischen Felder des Forschungsprogramms sind aus der r\u00e4umlichen, interaktiven und zeitlichen Dimensionierung kultureller Konfigurationen hergeleitet. In jedem der Felder untersuchen die Projekte Ph\u00e4nomene unterschiedlicher Gr\u00f6\u00dfenordnung.\" (Autorenreferat)\n\"The discussion paper develops, in its first part, the research program of the unit. The second\npart of the paper presents six projects, as well as two dissertations linked to the program.\nIt is assumed that newness is at the core of innovations and emerges in cultural configurations\nwhich are identified as cultural sources. The relevance of such cultural factors, as\nopposed to the influence of technical or political aspects, is the focus of research. Three\nkinds of processes determine the quality and the connectivity of innovations: 1) the\ncontinuous variation of shared cultural semantics and practices, 2) processes of evaluating\nnewness and 2) states of tension in and between cultures. The interplay of these three\nprocesses, it is argued, determines the spectrum and the spread of successful innovations.\nThe empirical streams of the research program are deduced from the spatial, interactive and\ntemporal dimension of cultural configurations. 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Kuitenkin lasten kokemaa kipua on vaikeaa tutkia, lasten puutteellisen viestinn\u00e4n vuoksi. Lyhytvaikutteisista opioideista k\u00e4ytet\u00e4\u00e4n sairaalan ulkopuolisessa lasten ensihoidossa alfentaniili\u00e4 ja fentanyyli\u00e4. Pitk\u00e4vaikutteisista opioideista k\u00e4ytet\u00e4\u00e4n morfiinia ja uutena tulokkaana oksikodonia. Lis\u00e4ksi lieviin kiputiloihin k\u00e4ytet\u00e4\u00e4n tulehduskipul\u00e4\u00e4kkeit\u00e4 ja parasetamolia."}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Our study is a literature review of the material is based on literature for children and young people in care, pain management and emergency care. 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"value": "Abstract Background Perfect and low cost of fungal amylolytic and cellulolytic enzymes are prerequisite for the industrialization of plant biomass biorefinergy to biofuels. Genetic engineering of fungal strains based on regulatory network of transcriptional factors (TFs) and their targets is an efficient strategy to achieve the above described aim. Talaromyces pinophilus produces integrative amylolytic and cellulolytic enzymes; however, the regulatory mechanism associated with the expression of amylase and cellulase genes in T. pinophilus remains unclear. In this study, we screened for and identified novel TFs regulating amylase and/or cellulase gene expression in T. pinophilus 1-95 through comparative transcriptomic and genetic analyses. Results Comparative analysis of the transcriptomes from T. pinophilus 1-95 grown on media in the presence and absence of glucose or soluble starch as the sole carbon source screened 33 candidate TF-encoding genes that regulate amylase gene expression. Thirty of the 33 genes were successfully knocked out in the parental strain T. pinophilus \u2206TpKu70, with seven of the deletion mutants firstly displaying significant changes in amylase production as compared with the parental strain. Among these, \u2206TpRfx1 (TpRfx1: Talaromyces pinophilus Rfx1) showed the most significant decrease (81.5%) in amylase production, as well as a 57.7% reduction in filter paper cellulase production. Real-time quantitative reverse transcription PCR showed that TpRfx1 dynamically regulated the expression of major amylase and cellulase genes during cell growth, and in vitro electrophoretic mobility shift assay revealed that TpRfx1 bound the promoter regions of genes encoding \u03b1-amylase (TP04014/Amy13A), glucoamylase (TP09267/Amy15A), cellobiohydrolase (TP09412/cbh1), \u03b2-glucosidase (TP05820/bgl1), and endo-\u03b2-1,4-glucanase (TP08514/eg1). TpRfx1 protein containing a regulatory factor X (RFX) DNA-binding domain belongs to RFX family. Conclusion We identified a novel RFX protein TpRFX1 that directly regulates the expression of amylase and cellulase genes in T. pinophilus, which provides new insights into the regulatory mechanism of fungal amylase and cellulase gene expression."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2018-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": 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However, in urban growth models (particularly when incorporating quantitative approaches to include driving factors of urban growth), spatial autocorrelation may influence the overall model performance. In this paper, an empirical study was conducted in the region of Munich, and an integrated urban growth model was tested to explain current urban growth. The modeling contributes to advances in the state of the art by combining a range of driving factors using autologistic regression with a transition probability matrix from the Markov chain method in a cellular automata model simulation. The autologistic regression employed here addresses the impact of spatial autocorrelation compared to ordinary logistic regression. Furthermore, this study compared modeling of overall settlement growth with modeling high- and low-density settlement types separately. Incorporating spatial dependency into the model through application of autologistic regression showed improvements when compared to the ordinary logistic regression model. The Kappa indexes were higher when separately modeling the two types of settlement density compared to modeling overall settlement growth since the driving factors of settlement growth of different densities might be different. From an urban planning perspective, this novel autologistic regression-Markov chain-based cellular automata model is a powerful tool that offers an opportunity for planners and government authorities to gain a more precise understanding of the different urban growth processes that might occur in an urban region similar to the one tested here. 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Methods: The nomogram was developed on a set of 320 Italian patients and validated on two independent sets (295 Italian and 172 Korean patients). Putative prognostic variables were selected using a random forest model and included in the multivariable Cox model. The nomogram\u2019s performance was evaluated by calibration plot and C index. Results: ECOG performance status, neutrophils to lymphocytes ratio, and peritoneal involvement were selected and included into the multivariable model. The C index was 0.72 (95% CI 0.68\u20130.75) in the development set, 0.69 (95% CI 0.65\u20130.73) in the Italian validation set, but only 0.57 (95% CI 0.52\u20130.62) in the Korean set. While Italian calibrations were quite good, the Korean one was poor. Regarding 6-month OS predictions, calibration was best in both Caucasian cohorts and worst the in Asian one. Conclusions: Our nomogram may be a useful tool to predict 3- or 6-month OS in Caucasian gastric cancer patients eligible for second-line therapy. 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"value": "Abstract Background Perfect and low cost of fungal amylolytic and cellulolytic enzymes are prerequisite for the industrialization of plant biomass biorefinergy to biofuels. Genetic engineering of fungal strains based on regulatory network of transcriptional factors (TFs) and their targets is an efficient strategy to achieve the above described aim. Talaromyces pinophilus produces integrative amylolytic and cellulolytic enzymes; however, the regulatory mechanism associated with the expression of amylase and cellulase genes in T. pinophilus remains unclear. In this study, we screened for and identified novel TFs regulating amylase and/or cellulase gene expression in T. pinophilus 1-95 through comparative transcriptomic and genetic analyses. Results Comparative analysis of the transcriptomes from T. pinophilus 1-95 grown on media in the presence and absence of glucose or soluble starch as the sole carbon source screened 33 candidate TF-encoding genes that regulate amylase gene expression. Thirty of the 33 genes were successfully knocked out in the parental strain T. pinophilus \u2206TpKu70, with seven of the deletion mutants firstly displaying significant changes in amylase production as compared with the parental strain. Among these, \u2206TpRfx1 (TpRfx1: Talaromyces pinophilus Rfx1) showed the most significant decrease (81.5%) in amylase production, as well as a 57.7% reduction in filter paper cellulase production. Real-time quantitative reverse transcription PCR showed that TpRfx1 dynamically regulated the expression of major amylase and cellulase genes during cell growth, and in vitro electrophoretic mobility shift assay revealed that TpRfx1 bound the promoter regions of genes encoding \u03b1-amylase (TP04014/Amy13A), glucoamylase (TP09267/Amy15A), cellobiohydrolase (TP09412/cbh1), \u03b2-glucosidase (TP05820/bgl1), and endo-\u03b2-1,4-glucanase (TP08514/eg1). TpRfx1 protein containing a regulatory factor X (RFX) DNA-binding domain belongs to RFX family. Conclusion We identified a novel RFX protein TpRFX1 that directly regulates the expression of amylase and cellulase genes in T. pinophilus, which provides new insights into the regulatory mechanism of fungal amylase and cellulase gene expression."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2018-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": 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"", "processingchargecurrency": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2019-01-01"}, "collectedfrom": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}, "processingchargeamount": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "instancetype": {"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract We applied the epidemic type aftershock sequence (ETAS) model, the two-stage ETAS model and the non-stationary ETAS model to investigate the detailed features of the series of earthquake occurrences before and after the M6.7 Hokkaido Eastern Iburi earthquake on 6 September 2018, based on earthquake data from October 1997. First, after the 2003 M8.0 Tokachi-Oki earthquake, seismic activity in the Eastern Iburi region reduced relative to the ETAS model. During this period, the depth ranges of the seismicity were migrating towards shallow depths, where a swarm cluster, including a M5.1 earthquake, finally occurred in the deepest part of the range. This swarm activity was well described by the non-stationary ETAS model until the M6.7 main shock. The aftershocks of the M6.7 earthquake obeyed the ETAS model until the M5.8 largest aftershock, except for a period of several days when small, swarm-like activity was found at the southern end of the aftershock region. However, when we focus on the medium and larger aftershocks, we observed quiescence relative to the ETAS model from 8.6\u00c2 days after the main shock until the M5.8 largest aftershock. For micro-earthquakes, we further studied the separated aftershock sequences in the naturally divided aftershock volumes. We found that the temporal changes in the background rate and triggering coefficient (aftershock productivity) in respective sub-volumes were in contrast with each other. In particular, relative quiescence was seen in the northern deep zones that includes the M5.8 largest aftershock. 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A possible option to improve the autonomic control is the inspiratory muscle training (IMT). The aim of this study was to systematically review the available literature about the effects of this training modality on autonomic control. A search was performed for controlled and randomized clinical trials on database MEDLINE, PEDro, SciELO and LILACS by two independent reviewers, who also evaluated the methodologic quality (PEDro scale). 181 articles were found and, after elegibility criteria analysis, four studies were included. The included studies showed good methodological quality and assessed the effect of IMT on the autonomic control of participants with risk factors for cardiovascular disease. The autonomic control was evaluated by heart rate variability (HRV) analysis and by noradrenaline plasma levels. 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"trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}, "processingchargeamount": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "instancetype": {"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background We have previously showed that the carotenoid fucoxanthin can increase the lifespan in Drosophila melanogaster and Caenorhabditis elegans. However, the molecular mechanisms of the geroprotective effect of fucoxanthin have not been studied so far. Results Here, we studied the effects of fucoxanthin on the Drosophila aging process at the molecular and the whole organism levels. At the organismal level, fucoxanthin increased the median lifespan and had a positive effect on fecundity, fertility, intestinal barrier function, and nighttime sleep. Transcriptome analysis revealed 57 differentially expressed genes involved in 17 KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways. Among the most represented molecular pathways induced by fucoxanthin, a significant portion is related to longevity, including MAPK, mTOR, Wnt, Notch, and Hippo signaling pathways, autophagy, translation, glycolysis, oxidative phosphorylation, apoptosis, immune response, neurogenesis, sleep, and response to DNA damage. Conclusions Life-extending effects of fucoxanthin are associated with differential expression of longevity-associated genes."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2018-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["10.6084/m9.figshare.c.4001994.v1"], "contactperson": [], 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"schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "instancetype": {"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background Population based epigenetic association studies of disease and exposures are becoming more common with the availability of economical genome-wide technologies for interrogation of the methylome, such as the Illumina 450K Human Methylation Array (450K). Often, the expected small number of differentially methylated cytosine-guanine pairs (CpGs) in studies of the human methylome presents a statistical challenge, as the large number of CpGs measured on the 450K necessitates careful multiple test correction. While the 450K is a highly useful tool for population epigenetic studies, many of the CpGs tested are not variable and thus of limited information content in the context of the study and tissue. CpGs with observed lack of variability in the tissue under study could be removed to reduce the data dimensionality, limit the severity of multiple test correction and allow for improved detection of differential DNA methylation. Methods Here, we performed a meta-analysis of 450K data from three commonly studied human tissues, namely blood (605 samples), buccal epithelial cells (121 samples) and placenta (157 samples). We developed lists of CpGs that are non-variable in each tissue. Results These lists are surprisingly large (blood 114,204 CpGs, buccal epithelial cells 120,009 CpGs and placenta 101,367 CpGs) and thus will be valuable filters for epigenetic association studies, considerably reducing the dimensionality of the 450K and subsequently the multiple testing correction severity. Conclusions We propose this empirically derived method for data reduction to allow for more power in detecting differential DNA methylation associated with exposures in studies on the human methylome."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], 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Transversal cross-sectional research was carried out with 10 high school teachers from a state public school, who evaluated 10 students using the Teacher-Student Relationship Scale (ERPA). The results suggest that teachers tend to have greater affinity with female students and a conflicting relationship with male students. When correlating the academic performance variable with the affinity and conflict indicators, it was verified that there is a weak positive correlation between the conflict indicator and the academic performance of the discipline Philosophy. However, in the Geography discipline, there is also a weak positive correlation, but with the affinity indicator. 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{"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background The relationship between medication non-compliance in patients with schizophrenia and related disorders, and increased psychiatric service utilization and costs are well documented; however, non-psychiatric service utilization and costs are not. Therefore, we investigated the association of non-compliance with psychiatric treatment and the utilization and costs of non-psychiatric services. Methods Data on South Korean individuals with a lifetime diagnosis of schizophrenia or a related disorder, who were treated in a psychiatric clinic at least twice during 2011, were selected among national data collected for the Health Insurance Review and Assessment Service-National Patients Sample between January 1, 2011 and December 31, 2011. The sample was divided into two overlapping groups with two different classifications of patterns of medication prescription refills: (1) adherent versus non-adherent group, and (2) persistent versus non-persistent group. A matching method was used to remove the effects of different follow-up durations and insurance system on medical service utilization and costs. The final sample for analysis consisted of data from 5,548 individuals in the adherent versus non-adherent group and 3,912 in the persistent versus non-persistent group. Comparisons of the psychiatric and non-psychiatric service utilizations were made between the groups. Results The number of psychiatric service utilizations were significantly lower in the non-adherent than the adherent group. They were also significantly lower in the non-persistent group than the persistent group. The number of non-psychiatric service utilizations was significantly higher in the non-adherent group. They were also significantly higher in the non-persistent group than the persistent group. All psychiatric costs per person during the study period were lower in the non-adherent than the adherent group, and lower in the non-persistent than the persistent group. All non-psychiatric costs per person were higher in the non-adherent than the adherent group, and higher in the non-persistent than the persistent group. Conclusion Non-adherence to psychiatric treatment by patients with schizophrenia and related disorders was associated with higher medical service utilization and increased personal and societal medical costs."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2016-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], 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"affiliation": [], "fullname": "Lee, Jung"}], "contactgroup": [], "instance": [{"refereed": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "hostedby": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::55045bd2a65019fd8e6741a755395c8c", "value": "Unknown Repository"}, "accessright": {"classid": "UNKNOWN", "classname": "UNKNOWN", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "license": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "https://creativecommons.org/licenses/by/4.0"}, "url": ["http://dx.doi.org/10.6084/m9.figshare.c.3643850.v1"], "distributionlocation": "", "processingchargecurrency": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2016-01-01"}, "collectedfrom": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}, "processingchargeamount": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "instancetype": {"classid": "0022", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background The relationship between medication non-compliance in patients with schizophrenia and related disorders, and increased psychiatric service utilization and costs are well documented; however, non-psychiatric service utilization and costs are not. Therefore, we investigated the association of non-compliance with psychiatric treatment and the utilization and costs of non-psychiatric services. Methods Data on South Korean individuals with a lifetime diagnosis of schizophrenia or a related disorder, who were treated in a psychiatric clinic at least twice during 2011, were selected among national data collected for the Health Insurance Review and Assessment Service-National Patients Sample between January 1, 2011 and December 31, 2011. The sample was divided into two overlapping groups with two different classifications of patterns of medication prescription refills: (1) adherent versus non-adherent group, and (2) persistent versus non-persistent group. A matching method was used to remove the effects of different follow-up durations and insurance system on medical service utilization and costs. The final sample for analysis consisted of data from 5,548 individuals in the adherent versus non-adherent group and 3,912 in the persistent versus non-persistent group. Comparisons of the psychiatric and non-psychiatric service utilizations were made between the groups. Results The number of psychiatric service utilizations were significantly lower in the non-adherent than the adherent group. They were also significantly lower in the non-persistent group than the persistent group. The number of non-psychiatric service utilizations was significantly higher in the non-adherent group. They were also significantly higher in the non-persistent group than the persistent group. All psychiatric costs per person during the study period were lower in the non-adherent than the adherent group, and lower in the non-persistent than the persistent group. All non-psychiatric costs per person were higher in the non-adherent than the adherent group, and higher in the non-persistent than the persistent group. Conclusion Non-adherence to psychiatric treatment by patients with schizophrenia and related disorders was associated with higher medical service utilization and increased personal and societal medical costs."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2016-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["10.6084/m9.figshare.c.3643850.v1"], "contactperson": [], "source": [], "context": [], "title": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "main title", "classname": "main title", "schemeid": "dnet:dataCite_title", "schemename": "dnet:dataCite_title"}, "value": "Association between non-compliance with psychiatric treatment and non-psychiatric service utilization and costs in patients with schizophrenia and related disorders"}]} +{"dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:datasetarchive", "classname": "sysimport:crosswalk:datasetarchive", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": "dedup-similarity-result-levenstein", "invisible": false, 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1813, "affiliation": [], "fullname": "Milstein, Dmitry"}, {"surname": "Minaenko", "name": "Andrey", "pid": [], "rank": 1814, "affiliation": [], "fullname": "Minaenko, Andrey"}, {"surname": "Minano", "name": "Mercedes", "pid": [], "rank": 1815, "affiliation": [], "fullname": "Minano, Mercedes"}, {"surname": "Minashvili", "name": "Irakli", "pid": [], "rank": 1816, "affiliation": [], "fullname": "Minashvili, Irakli"}, {"surname": "Mincer", "name": "Allen", "pid": [], "rank": 1817, "affiliation": [], "fullname": "Mincer, Allen"}, {"surname": "Mindur", "name": "Bartosz", "pid": [], "rank": 1818, "affiliation": [], "fullname": "Mindur, Bartosz"}, {"surname": "Mineev", "name": "Mikhail", "pid": [], "rank": 1819, "affiliation": [], "fullname": "Mineev, Mikhail"}, {"surname": "Ming", "name": "Yao", "pid": [], "rank": 1820, "affiliation": [], "fullname": "Ming, Yao"}, {"surname": "Mir", "name": "Lluisa-Maria", "pid": [], "rank": 1821, "affiliation": [], "fullname": "Mir, Lluisa-Maria"}, {"surname": "Mirabelli", "name": "Giovanni", "pid": [], "rank": 1822, "affiliation": [], "fullname": "Mirabelli, Giovanni"}, {"surname": "Miralles Verge", "name": "Lluis", "pid": [], "rank": 1823, "affiliation": [], "fullname": "Miralles Verge, Lluis"}, {"surname": "Misiejuk", "name": "Andrzej", "pid": [], "rank": 1824, "affiliation": [], "fullname": "Misiejuk, Andrzej"}, {"surname": "Mitrevski", "name": "Jovan", "pid": [], "rank": 1825, "affiliation": [], "fullname": "Mitrevski, Jovan"}, {"surname": "Mitrofanov", "name": "Gennady", "pid": [], "rank": 1826, "affiliation": [], "fullname": "Mitrofanov, Gennady"}, {"surname": "Mitsou", "name": "Vasiliki A.", "pid": [], "rank": 1827, "affiliation": [], "fullname": "Mitsou, Vasiliki A."}, {"surname": "Mitsui", "name": "Shingo", "pid": [], "rank": 1828, "affiliation": [], "fullname": "Mitsui, Shingo"}, {"surname": "Miyagawa", "name": "Paul", "pid": [], "rank": 1829, "affiliation": [], "fullname": "Miyagawa, Paul"}, {"surname": "Miyazaki", "name": "Kazuki", "pid": [], "rank": 1830, "affiliation": [], "fullname": "Miyazaki, Kazuki"}, {"surname": "Mjornmark", "name": "Jan-Ulf", "pid": [], "rank": 1831, "affiliation": [], "fullname": "Mjornmark, Jan-Ulf"}, {"surname": "Moa", "name": "Torbjoern", "pid": [], "rank": 1832, "affiliation": [], "fullname": "Moa, Torbjoern"}, {"surname": "Mockett", "name": "Paul", "pid": [], "rank": 1833, "affiliation": [], "fullname": "Mockett, Paul"}, {"surname": "Moed", "name": "Shulamit", "pid": [], "rank": 1834, "affiliation": [], "fullname": "Moed, Shulamit"}, {"surname": "Moeller", "name": "Victoria", "pid": [], "rank": 1835, "affiliation": [], "fullname": "Moeller, Victoria"}, {"surname": "Monig", "name": "Klaus", "pid": [], "rank": 1836, "affiliation": [], "fullname": "Monig, Klaus"}, {"surname": "Moser", "name": "Nicolas", "pid": [], "rank": 1837, "affiliation": [], "fullname": "Moser, Nicolas"}, {"surname": "Mohapatra", "name": "Soumya", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Mohapatra, Soumya"}, {"surname": "Mohr", "name": "Wolfgang", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Mohr, Wolfgang"}, {"surname": "Mohrdieck-Mock", "name": "Susanne", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Mohrdieck-Mock, Susanne"}, {"surname": "Moisseev", "name": "Artemy", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Moisseev, Artemy"}, {"surname": "Moles-Valls", "name": "Regina", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Moles-Valls, Regina"}, {"surname": "Molina-Perez", "name": "Jorge", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Molina-Perez, Jorge"}, {"surname": "Monk", "name": "James", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Monk, James"}, {"surname": "Monnier", "name": "Emmanuel", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Monnier, Emmanuel"}, {"surname": "Montesano", "name": "Simone", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Montesano, Simone"}, {"surname": "Monticelli", "name": "Fernando", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Monticelli, Fernando"}, {"surname": "Monzani", "name": "Simone", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Monzani, Simone"}, {"surname": "Moore", "name": "Roger", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Moore, Roger"}, {"surname": "Moorhead", "name": "Gareth", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Moorhead, Gareth"}, {"surname": "Mora Herrera", "name": "Clemencia", "pid": [], "rank": 1851, "affiliation": [], "fullname": "Mora Herrera, Clemencia"}, {"surname": "Moraes", "name": "Arthur", "pid": [], "rank": 1852, "affiliation": [], "fullname": "Moraes, Arthur"}, {"surname": "Morange", "name": "Nicolas", "pid": [], "rank": 1853, "affiliation": [], "fullname": "Morange, Nicolas"}, {"surname": "Morel", "name": "Julien", "pid": [], "rank": 1854, "affiliation": [], "fullname": "Morel, Julien"}, {"surname": "Morello", "name": "Gianfranco", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Morello, Gianfranco"}, {"surname": "Moreno", "name": "Deywis", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Moreno, Deywis"}, {"surname": "Moreno Lla\u0301cer", "name": "Mari\u0301a", "pid": [], "rank": 1857, "affiliation": [], "fullname": "Moreno Ll\u00e1cer, Mar\u00eda"}, {"surname": "Morettini", "name": "Paolo", "pid": [], "rank": 1858, "affiliation": [], "fullname": "Morettini, Paolo"}, {"surname": "Morii", "name": "Masahiro", "pid": [], "rank": 1859, "affiliation": [], "fullname": "Morii, Masahiro"}, {"surname": "Morin", "name": "Jerome", "pid": [], "rank": 1860, "affiliation": [], "fullname": "Morin, Jerome"}, {"surname": "Morita", "name": "Youhei", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Morita, Youhei"}, {"surname": "Morley", "name": "Anthony Keith", "pid": [], "rank": 1862, "affiliation": [], "fullname": "Morley, Anthony Keith"}, {"surname": "Mornacchi", "name": "Giuseppe", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Mornacchi, Giuseppe"}, {"surname": "Morozov", "name": "Sergey", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Morozov, Sergey"}, {"surname": "Morris", "name": "John", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Morris, John"}, {"surname": "Morvaj", "name": "Ljiljana", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Morvaj, Ljiljana"}, {"surname": "Moser", "name": "Hans-Guenther", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Moser, Hans-Guenther"}, {"surname": "Mosidze", "name": "Maia", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Mosidze, Maia"}, {"surname": "Moss", "name": "Josh", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Moss, Josh"}, {"surname": "Mount", "name": "Richard", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Mount, Richard"}, {"surname": "Mountricha", "name": "Eleni", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Mountricha, Eleni"}, {"surname": "Mouraviev", "name": "Sergei", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Mouraviev, Sergei"}, {"surname": "Moyse", "name": "Edward", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Moyse, Edward"}, {"surname": "Mudrinic", "name": "Mihajlo", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Mudrinic, Mihajlo"}, {"surname": "Mueller", "name": "Felix", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Mueller, Felix"}, {"surname": "Mueller", "name": "James", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Mueller, James"}, {"surname": "Mueller", "name": "Klemens", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Mueller, Klemens"}, {"surname": "Muller", "name": "Thomas", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Muller, Thomas"}, {"surname": "Muenstermann", "name": "Daniel", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Muenstermann, Daniel"}, {"surname": "Muir", "name": "Alex", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Muir, Alex"}, {"surname": "Munwes", "name": "Yonathan", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Munwes, Yonathan"}, {"surname": "Murray", "name": "Bill", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Murray, Bill"}, {"surname": "Mussche", "name": "Ido", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Mussche, Ido"}, {"surname": "Musto", "name": "Elisa", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Musto, Elisa"}, {"surname": "Myagkov", "name": "Alexey", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Myagkov, Alexey"}, {"surname": "Myska", "name": "Miroslav", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Myska, Miroslav"}, {"surname": "Nadal", "name": "Jordi", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Nadal, Jordi"}, {"surname": "Nagai", "name": "Koichi", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Nagai, Koichi"}, {"surname": "Nagano", "name": "Kunihiro", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Nagano, Kunihiro"}, {"surname": "Nagasaka", "name": "Yasushi", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Nagasaka, Yasushi"}, {"surname": "Nairz", "name": "Armin Michael", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Nairz, Armin Michael"}, {"surname": "Nakahama", "name": "Yu", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Nakahama, Yu"}, {"surname": "Nakamura", "name": "Koji", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Nakamura, Koji"}, {"surname": "Nakano", "name": "Itsuo", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Nakano, Itsuo"}, {"surname": "Nanava", "name": "Gizo", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Nanava, Gizo"}, {"surname": "Napier", "name": "Austin", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Napier, Austin"}, {"surname": "Nash", "name": "Michael", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Nash, Michael"}, {"surname": "Nation", "name": "Nigel", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Nation, Nigel"}, {"surname": "Nattermann", "name": "Till", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Nattermann, Till"}, {"surname": "Naumann", "name": "Thomas", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Naumann, Thomas"}, {"surname": "Navarro", "name": "Gabriela", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Navarro, Gabriela"}, {"surname": "Neal", "name": "Homer", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Neal, Homer"}, {"surname": "Nebot", "name": "Eduardo", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Nebot, Eduardo"}, {"surname": "Nechaeva", "name": "Polina", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Nechaeva, Polina"}, {"surname": "Negri", "name": "Andrea", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Negri, Andrea"}, {"surname": "Negri", "name": "Guido", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Negri, Guido"}, {"surname": "Nektarijevic", "name": "Snezana", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Nektarijevic, Snezana"}, {"surname": "Nelson", "name": "Andrew", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Nelson, Andrew"}, {"surname": "Nelson", "name": "Silke", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Nelson, Silke"}, {"surname": "Nelson", "name": "Timothy Knight", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Nelson, Timothy Knight"}, {"surname": "Nemecek", "name": "Stanislav", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Nemecek, Stanislav"}, {"surname": "Nemethy", "name": "Peter", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nepomuceno", "name": "Andre Asevedo", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Nepomuceno, Andre Asevedo"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Nesterov", "name": "Stanislav", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Nesterov, Stanislav"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neusiedl", "name": "Andrea", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Neusiedl, Andrea"}, {"surname": "Neves", "name": "Ricardo", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Neves, Ricardo"}, {"surname": "Nevski", "name": "Pavel", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Nevski, Pavel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Hong", "name": "Nguyen Thi", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Hong, Van Nguyen Thi"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nicolas", "name": "Ludovic", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Nicolas, Ludovic"}, {"surname": "Nicquevert", "name": "Bertrand", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Nicquevert, Bertrand"}, {"surname": "Niedercorn", "name": "Francois", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Niedercorn, Francois"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Niinikoski", "name": "Tapio", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Niinikoski, Tapio"}, {"surname": "Nikiforou", "name": "Nikiforos", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Nikiforou, Nikiforos"}, {"surname": "Nikiforov", "name": "Andriy", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Nikiforov, Andriy"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolaev", "name": "Kirill", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Nikolaev, Kirill"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolics", "name": "Katalin", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Nikolics, Katalin"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Henrik", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Nilsen, Henrik"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishiyama", "name": "Tomonori", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Nishiyama, Tomonori"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nodulman", "name": "Lawrence", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Nodulman, Lawrence"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Nordkvist", "name": "Bjoern", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Nordkvist, Bjoern"}, {"surname": "Norton", "name": "Peter", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Norton, Peter"}, {"surname": "Novakova", "name": "Jana", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Novakova, Jana"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozicka", "name": "Miroslav", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Nozicka, Miroslav"}, {"surname": "Nozka", "name": "Libor", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Nozka, Libor"}, {"surname": "Nugent", "name": "Ian Michael", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Nugent, Ian Michael"}, {"surname": "Nuncio-Quiroz", "name": "Adriana-Elizabeth", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Nuncio-Quiroz, Adriana-Elizabeth"}, {"surname": "Nunes Hanninger", "name": "Guilherme", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Nunes Hanninger, Guilherme"}, {"surname": "Nunnemann", "name": "Thomas", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Nunnemann, Thomas"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nyman", "name": "Tommi", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Nyman, Tommi"}, {"surname": "O Brien", "name": "Brendan Joseph", "pid": [], "rank": 1958, "affiliation": [], "fullname": "O'Brien, Brendan Joseph"}, {"surname": "O Neale", "name": "Steve", "pid": [], "rank": 1959, "affiliation": [], "fullname": "O'Neale, Steve"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1960, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1961, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Ohshita", "name": "Hidetoshi", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Ohshita, Hidetoshi"}, {"surname": "Ohska", "name": "Tokio Kenneth", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Ohska, Tokio Kenneth"}, {"surname": "Ohsugi", "name": "Takashi", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Ohsugi, Takashi"}, {"surname": "Okada", "name": "Shogo", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Okada, Shogo"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olcese", "name": "Marco", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Olcese, Marco"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 1985, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 1986, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 1987, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 1988, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Omachi", "name": "Chihiro", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Omachi, Chihiro"}, {"surname": "Onofre", "name": "Antonio", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Onofre, Antonio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlov", "name": "Iliya", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Orlov, Iliya"}, {"surname": "Oropeza Barrera", "name": "Cristina", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Oropeza Barrera, 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"Ahmimed", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Ouraou, Ahmimed"}, {"surname": "Ouyang", "name": "Qun", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Ouyang, Qun"}, {"surname": "Owen", "name": "Mark", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Owen, Mark"}, {"surname": "Owen", "name": "Simon", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Owen, Simon"}, {"surname": "Ozcan", "name": "Veysi Erkcan", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Ozcan, Veysi Erkcan"}, {"surname": "Ozturk", "name": "Nurcan", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Ozturk, Nurcan"}, {"surname": "Pages", "name": "Andres Pacheco", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Pages, Andres Pacheco"}, {"surname": "Padilla Aranda", "name": "Cristobal", "pid": [], "rank": 2013, "affiliation": [], "fullname": "Padilla Aranda, Cristobal"}, {"surname": "Pagan Griso", "name": "Simone", "pid": [], "rank": 2014, 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"Moser, Nicolas"}, {"surname": "Mohapatra", "name": "Soumya", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Mohapatra, Soumya"}, {"surname": "Mohn", "name": "Bjarte", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Mohn, Bjarte"}, {"surname": "Mohr", "name": "Wolfgang", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Mohr, Wolfgang"}, {"surname": "Mohrdieck-Mock", "name": "Susanne", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Mohrdieck-Mock, Susanne"}, {"surname": "Moisseev", "name": "Artemy", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Moisseev, Artemy"}, {"surname": "Moles-Valls", "name": "Regina", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Moles-Valls, Regina"}, {"surname": "Molina-Perez", "name": "Jorge", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Molina-Perez, Jorge"}, {"surname": "Moneta", "name": "Lorenzo", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Moneta, Lorenzo"}, {"surname": "Monk", "name": "James", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Monk, James"}, {"surname": "Monnier", "name": "Emmanuel", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Monnier, Emmanuel"}, {"surname": "Montesano", "name": "Simone", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Montesano, Simone"}, {"surname": "Monticelli", "name": "Fernando", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Monticelli, Fernando"}, {"surname": "Monzani", "name": "Simone", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Monzani, Simone"}, {"surname": "Moore", "name": "Roger", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Moore, Roger"}, {"surname": "Moorhead", "name": "Gareth", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Moorhead, Gareth"}, {"surname": "Mora Herrera", "name": "Clemencia", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Mora Herrera, Clemencia"}, {"surname": "Moraes", "name": "Arthur", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Moraes, Arthur"}, {"surname": "Morais", "name": "Antonio", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Morais, Antonio"}, {"surname": "Morange", "name": "Nicolas", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Morange, Nicolas"}, {"surname": "Morel", "name": "Julien", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Morel, Julien"}, {"surname": "Morello", "name": "Gianfranco", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Morello, Gianfranco"}, {"surname": "Moreno", "name": "Deywis", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Moreno, Deywis"}, {"surname": "Moreno Lla\u0301cer", "name": "Mari\u0301a", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Moreno Ll\u00e1cer, Mar\u00eda"}, {"surname": "Morettini", "name": "Paolo", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Morettini, Paolo"}, {"surname": "Morii", "name": "Masahiro", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Morii, Masahiro"}, {"surname": "Morin", "name": "Jerome", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Morin, Jerome"}, {"surname": "Morita", "name": "Youhei", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Morita, Youhei"}, {"surname": "Morley", "name": "Anthony Keith", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Morley, Anthony Keith"}, {"surname": "Mornacchi", "name": "Giuseppe", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Mornacchi, Giuseppe"}, {"surname": "Morone", "name": "Maria-Christina", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Morone, Maria-Christina"}, {"surname": "Morozov", "name": "Sergey", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Morozov, Sergey"}, {"surname": "Morris", "name": "John", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Morris, John"}, {"surname": "Moser", "name": "Hans-Guenther", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Moser, Hans-Guenther"}, {"surname": "Mosidze", "name": "Maia", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Mosidze, Maia"}, {"surname": "Moss", "name": "Josh", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Moss, Josh"}, {"surname": "Mount", "name": "Richard", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Mount, Richard"}, {"surname": "Mountricha", "name": "Eleni", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Mountricha, Eleni"}, {"surname": "Mouraviev", "name": "Sergei", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Mouraviev, Sergei"}, {"surname": "Moyse", "name": "Edward", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Moyse, Edward"}, {"surname": "Mudrinic", "name": "Mihajlo", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Mudrinic, Mihajlo"}, {"surname": "Mueller", "name": "Felix", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Mueller, Felix"}, {"surname": "Mueller", "name": "James", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Mueller, James"}, {"surname": "Mueller", "name": "Klemens", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Mueller, Klemens"}, {"surname": "Muller", "name": "Thomas", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Muller, Thomas"}, {"surname": "Muenstermann", "name": "Daniel", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Muenstermann, Daniel"}, {"surname": "Muijs", "name": "Sandra", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Muijs, Sandra"}, {"surname": "Muir", "name": "Alex", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Muir, Alex"}, {"surname": "Munwes", "name": "Yonathan", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Munwes, Yonathan"}, {"surname": "Murakami", "name": "Koichi", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Murakami, Koichi"}, {"surname": "Murray", "name": "Bill", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Murray, Bill"}, {"surname": "Mussche", "name": "Ido", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Mussche, Ido"}, {"surname": "Musto", "name": "Elisa", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Musto, Elisa"}, {"surname": "Myagkov", "name": "Alexey", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Myagkov, Alexey"}, {"surname": "Myska", "name": "Miroslav", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Myska, Miroslav"}, {"surname": "Nadal", "name": "Jordi", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Nadal, Jordi"}, {"surname": "Nagai", "name": "Koichi", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Nagai, Koichi"}, {"surname": "Nagano", "name": "Kunihiro", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Nagano, Kunihiro"}, {"surname": "Nagasaka", "name": "Yasushi", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Nagasaka, Yasushi"}, {"surname": "Nairz", "name": "Armin Michael", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Nairz, Armin Michael"}, {"surname": "Nakahama", "name": "Yu", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Nakahama, Yu"}, {"surname": "Nakamura", "name": "Koji", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Nakamura, Koji"}, {"surname": "Nakano", "name": "Itsuo", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Nakano, Itsuo"}, {"surname": "Nanava", "name": "Gizo", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Nanava, Gizo"}, {"surname": "Napier", "name": "Austin", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Napier, Austin"}, {"surname": "Nash", "name": "Michael", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Nash, Michael"}, {"surname": "Nation", "name": "Nigel", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Nation, Nigel"}, {"surname": "Nattermann", "name": "Till", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Nattermann, Till"}, {"surname": "Naumann", "name": "Thomas", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Naumann, Thomas"}, {"surname": "Navarro", "name": "Gabriela", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Navarro, Gabriela"}, {"surname": "Neal", "name": "Homer", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Neal, Homer"}, {"surname": "Nebot", "name": "Eduardo", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Nebot, Eduardo"}, {"surname": "Nechaeva", "name": "Polina", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Nechaeva, Polina"}, {"surname": "Negri", "name": "Andrea", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Negri, Andrea"}, {"surname": "Negri", "name": "Guido", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Negri, Guido"}, {"surname": "Nektarijevic", "name": "Snezana", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Nektarijevic, Snezana"}, {"surname": "Nelson", "name": "Andrew", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Nelson, Andrew"}, {"surname": "Nelson", "name": "Silke", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Nelson, Silke"}, {"surname": "Nelson", "name": "Timothy Knight", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Nelson, Timothy Knight"}, {"surname": "Nemecek", "name": "Stanislav", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Nemecek, Stanislav"}, {"surname": "Nemethy", "name": "Peter", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nepomuceno", "name": "Andre Asevedo", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Nepomuceno, Andre Asevedo"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Nesterov", "name": "Stanislav", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Nesterov, Stanislav"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neusiedl", "name": "Andrea", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Neusiedl, Andrea"}, {"surname": "Neves", "name": "Ricardo", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Neves, Ricardo"}, {"surname": "Nevski", "name": "Pavel", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Nevski, Pavel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nicolas", "name": "Ludovic", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Nicolas, Ludovic"}, {"surname": "Nicquevert", "name": "Bertrand", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Nicquevert, Bertrand"}, {"surname": "Niedercorn", "name": "Francois", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Niedercorn, Francois"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Niinikoski", "name": "Tapio", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Niinikoski, Tapio"}, {"surname": "Nikiforov", "name": "Andriy", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Nikiforov, Andriy"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolaev", "name": "Kirill", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Nikolaev, Kirill"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Henrik", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Nilsen, Henrik"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishiyama", "name": "Tomonori", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Nishiyama, Tomonori"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nodulman", "name": "Lawrence", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Nodulman, Lawrence"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nomoto", "name": "Hiroshi", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Nomoto, Hiroshi"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Nordkvist", "name": "Bjoern", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Nordkvist, Bjoern"}, {"surname": "Norton", "name": "Peter", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Norton, Peter"}, {"surname": "Novakova", "name": "Jana", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Novakova, Jana"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozicka", "name": "Miroslav", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Nozicka, Miroslav"}, {"surname": "Nugent", "name": "Ian Michael", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Nugent, Ian Michael"}, {"surname": "Nuncio-Quiroz", "name": "Adriana-Elizabeth", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Nuncio-Quiroz, Adriana-Elizabeth"}, {"surname": "Nunes Hanninger", "name": "Guilherme", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Nunes Hanninger, Guilherme"}, {"surname": "Nunnemann", "name": "Thomas", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Nunnemann, Thomas"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nyman", "name": "Tommi", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Nyman, Tommi"}, {"surname": "O Brien", "name": "Brendan Joseph", "pid": [], "rank": 1985, "affiliation": [], "fullname": "O'Brien, Brendan Joseph"}, {"surname": "O Neale", "name": "Steve", "pid": [], "rank": 1986, "affiliation": [], "fullname": "O'Neale, Steve"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1987, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1988, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Ohshita", "name": "Hidetoshi", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Ohshita, Hidetoshi"}, {"surname": "Ohska", "name": "Tokio Kenneth", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Ohska, Tokio Kenneth"}, {"surname": "Ohsugi", "name": "Takashi", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Ohsugi, Takashi"}, {"surname": "Okada", "name": "Shogo", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Okada, Shogo"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olcese", "name": "Marco", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Olcese, Marco"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 2013, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 2014, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 2015, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Omachi", "name": "Chihiro", "pid": [], "rank": 2016, "affiliation": [], "fullname": "Omachi, Chihiro"}, {"surname": "Onofre", "name": "Antonio", "pid": [], "rank": 2017, "affiliation": [], "fullname": "Onofre, Antonio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 2018, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 2019, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Ordonez", "name": "Gustavo", "pid": [], "rank": 2020, "affiliation": [], "fullname": "Ordonez, Gustavo"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 2021, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": "Orellana", "name": "Frederik", "pid": [], "rank": 2022, "affiliation": [], "fullname": "Orellana, Frederik"}, {"surname": "Oren", "name": "Yona", "pid": [], "rank": 2023, "affiliation": [], "fullname": "Oren, Yona"}, {"surname": "Orestano", "name": "Domizia", "pid": [], "rank": 2024, "affiliation": [], "fullname": "Orestano, Domizia"}, {"surname": "Orlov", "name": "Iliya", "pid": [], "rank": 2025, "affiliation": [], "fullname": "Orlov, Iliya"}, {"surname": "Oropeza Barrera", "name": "Cristina", "pid": [], "rank": 2026, "affiliation": [], "fullname": "Oropeza Barrera, Cristina"}, {"surname": "Orr", "name": "Robert", "pid": [], "rank": 2027, "affiliation": [], "fullname": "Orr, Robert"}, {"surname": "Ortega", "name": "Eduardo", "pid": [], "rank": 2028, "affiliation": [], "fullname": "Ortega, Eduardo"}, {"surname": "Osculati", "name": "Bianca", "pid": [], "rank": 2029, "affiliation": [], "fullname": "Osculati, Bianca"}, {"surname": "Ospanov", "name": "Rustem", "pid": [], "rank": 2030, 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On a un pommier en fruit et un dattier qui porte ses r\u00e9gimes. Une personne ramasse d'ailleurs des dattes sur le palmier, repr\u00e9sent\u00e9 avec deux gourmands. Une autre grimpe au pommier. Une charrette est dessin\u00e9e (avec son \u00e2ne et un drapeau \u00e9gyptien \u00e0 l'arri\u00e8re) et une automobile \u00e9galement. Un homme semble juch\u00e9 sur son toit, mais il n'est que qu'\u00e0 c\u00f4t\u00e9. Un oiseau (g\u00e9n\u00e9rique) vole dans le ciel. \u00c0 gauche, ce sont des d\u00e9corations de couleur et une plante ornementale en pot.
[Ateliers avec les enfants berb\u00e9rophones de l'oasis de Siwa (\u00c9gypte), gar\u00e7ons et fillettes de 8 \u00e0 12 ans, r\u00e9alis\u00e9s le 21 f\u00e9vrier 2006 pr\u00e8s de l'\u00e9cole du village d'Aghurmi (proche de Siwa) et le 22 f\u00e9vrier 2006 pr\u00e8s du souk Siwa m\u00eame. Une seule demande leur a \u00e9t\u00e9 faite (en leur fournissant le mat\u00e9riel de dessin)\u00a0: dessinez la nature. Objectif\u00a0: voir ce que repr\u00e9sente la nature pour eux et ce qu'ils en repr\u00e9sentent.]"}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2006-02-22"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "HAL CCSD"}, "language": {"classid": "und", "classname": "Undetermined", "schemeid": "dnet:languages", "schemename": "dnet:languages"}, "bestaccessright": {"classid": "OPEN", "classname": "Open Access", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["oai:HAL:medihal-00572588v1"], "contactperson": [], "source": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "https://medihal.archives-ouvertes.fr/medihal-00572588"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Drawing. Vincent Battesti, S\u012bwah, Egypt. 2006"}], "context": [], "title": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "main title", "classname": "main title", "schemeid": "dnet:dataCite_title", "schemename": "dnet:dataCite_title"}, "value": "Abd el-Aziz Abd el-Rahman Jibril, 8 ans - \"Dessinez-moi la nature\": num\u00e9risation de dessins d'enfants [travail ethnographique sur la repr\u00e9sentation de l'environnement \u00e0 Siwa, oasis \u00e9gyptienne du d\u00e9sert libyque, par Vincent Battesti]."}]} +{"dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:datasetarchive", "classname": "sysimport:crosswalk:datasetarchive", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": 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This zircon U\u2013Pb dating and Hf isotopic study documents multiple Neoarchaean to Palaeoproterozoic tectonothermal events from the meta-igneous complex in the Machollyong \u2018Group\u2019 of the Rangnim Massif. Two tonalitic-trondjemitic gneiss samples record a crystallization age of meta-igneous protoliths at ca. 2.56 Ga and multiple migmatization and metamorphism from 2.52 to 1.85 Ga. A meta-dolerite sample yields a magmatic emplacement age of ca. 1.83 Ga. In situ zircon Hf isotopic data indicate that most zircons from the gneiss samples have \u03b5Hf(t) values from \u201316.9 to + 3.1 and crustal model ages from 2.84 to 3.73 Ga, whereas magmatic zircons from the meta-dolerite dike record \u03b5Hf(t) values from \u20135.2 to + 5.2 and model ages of 2.05\u20132.44 Ga. The first-recognized Neoarchaean tonalitic-trondjemitic migmatite complex in the Rangnim Massif, together with previously identified tonalitic-trondhjemitic-granodioritic (TTG) rocks in the Rimjingang Belt and the coeval counterparts in western Gyeonggi massif, represents the oldest crustal nuclei in the Korean Peninsula. The multiple tectonothermal events in this study present reliable evidence not only for attesting to consanguinity of the basement between the Korean Peninsula and the North China Craton but also for defining the influence scope of the late Palaeoproterozoic orogeny in the Korean Peninsula."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2016-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["10.6084/m9.figshare.3479078.v1"], "contactperson": [], "source": [], "context": [], "title": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "main title", "classname": "main title", "schemeid": "dnet:dataCite_title", "schemename": "dnet:dataCite_title"}, "value": "Decoding Neoarchaean to Palaeoproterozoic tectonothermal events in the Rangnim Massif, North Korea: regional correlation and broader implications"}]} +{"dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:repository", "classname": "sysimport:crosswalk:repository", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": "dedup-similarity-result-levenstein", "invisible": false, "trust": "0.9"}, "resourcetype": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "pid": [], "contributor": [], "resulttype": {"classid": "other", "classname": "other", "schemeid": "dnet:result_typologies", "schemename": "dnet:result_typologies"}, "relevantdate": [], "collectedfrom": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|opendoar____::c9892a989183de32e976c6f04e700201", "value": "TU Delft Repository"}], "id": "50|od_______571::9705522dc4b7693f2e4764aadb168c7c", "subject": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "self-healing"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "polymer composites"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "compartmented fibres"}, {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "keyword", "classname": "keyword", "schemeid": "dnet:subject_classification_typologies", "schemename": "dnet:subject_classification_typologies"}, "value": "multiple release"}], "embargoenddate": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "lastupdatetimestamp": 0, "author": [{"surname": "Prajer", "name": "M.", "pid": [], "rank": 1, "affiliation": [], "fullname": "Prajer, M."}, {"surname": "Wu", "name": "X.", "pid": [], "rank": 2, "affiliation": [], "fullname": "Wu, X."}, {"surname": "Garcia Espallargas", "name": "S. 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A critical factor in structural design is the resistance of a structure to progressive damage which develops during its service time. The brittle nature of matrix cracking is the main source of composite failure initiating ply delamination and fibre to matrix debonding.\nBio-inspired autonomous healing systems, embedded in a polymer matrix, are being developed to improve the fracture resistance of structural composites [1, 2, 3]. An exemplary system can consist of fibres with individual compartments, i.e. compartmented fibres, which are filled with a healing liquid. The healing agent is distributed within the fibre in the form of long elongated compartments of ellipsoidal shape with high aspect ratio. 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"classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}}], "dateofcollection": "2018-10-28T00:39:04.337Z", "fulltext": [], "dateoftransformation": "", "description": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Abstract Background Molecular characterization is important for efficient utilization of germplasm and development of improved varieties. In the present study, we investigated the genetic purity, relatedness and population structure of 265 maize inbred lines from the Ethiopian Institute of Agricultural Research (EIAR), the International Maize and Wheat Improvement Centre (CIMMYT) and the International Institute of Tropical Agriculture (IITA) using 220,878 single nucleotide polymorphic (SNP) markers obtained using genotyping by sequencing (GBS). Results Only 22% of the inbred lines were considered pure with <5% heterogeneity, while the remaining 78% of the inbred lines had a heterogeneity ranging from 5.1 to 31.5%. Pairwise genetic distances among the 265 inbred lines varied from 0.011 to 0.345, with 89% of the pairs falling between 0.301 and 0.345. Only <1% of the pairs had a genetic distance lower than 0.200, which included 14 pairs of sister lines that were nearly identical. Relative kinship analysis showed that the kinship coefficients for 59% of the pairs of lines was close to zero, which agrees with the genetic distance estimates. Principal coordinate analysis, discriminant analysis of principal components (DAPC) and the model-based population structure analysis consistently suggested the presence of three groups, which generally agreed with pedigree information (genetic background). Although not distinct enough, the SNP markers showed some level of separation between the two CIMMYT heterotic groups A and B established based on pedigree and combining ability information. Conclusions The high level of heterogeneity detected in most of the inbred lines suggested the requirement for purification or further inbreeding except those deliberately maintained at early inbreeding level. The genetic distance and relative kinship analysis clearly indicated the uniqueness of most of the inbred lines in the maize germplasm available for breeders in the mid-altitude maize breeding program of Ethiopia. Results from the present study facilitate the maize breeding work in Ethiopia and germplasm exchange among breeding programs in Africa. We suggest the incorporation of high density molecular marker information in future heterotic group assignments."}], "format": [], "tool": [], "dateofacceptance": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "2017-01-01"}, "coverage": [], "publisher": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": "Figshare"}, "language": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "bestaccessright": {"classid": "UNKNOWN", "classname": "not available", "schemeid": "dnet:access_modes", "schemename": "dnet:access_modes"}, "country": [], "extraInfo": [], "originalId": ["10.6084/m9.figshare.c.3903667"], "contactperson": [], "source": [], "context": [], "title": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "main title", "classname": "main title", "schemeid": "dnet:dataCite_title", "schemename": "dnet:dataCite_title"}, "value": "Genetic variation and population structure of maize inbred lines adapted to the mid-altitude sub-humid maize agro-ecology of Ethiopia using single nucleotide polymorphic (SNP) markers"}]} +{"dataInfo": {"provenanceaction": {"classid": "sysimport:crosswalk:datasetarchive", "classname": "sysimport:crosswalk:datasetarchive", "schemeid": "dnet:provenanceActions", "schemename": "dnet:provenanceActions"}, "deletedbyinference": false, "inferred": true, "inferenceprovenance": "dedup-similarity-result-levenstein", "invisible": false, "trust": "0.9"}, "resourcetype": {"classid": "Collection", "classname": "Collection", "schemeid": "dnet:dataCite_resource", "schemename": "dnet:dataCite_resource"}, "pid": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "qualifier": {"classid": "doi", "classname": "doi", "schemeid": "dnet:pid_types", "schemename": "dnet:pid_types"}, "value": "10.6084/m9.figshare.c.2185387.v1"}], "contributor": [], "resulttype": {"classid": "other", "classname": "other", "schemeid": "dnet:result_typologies", "schemename": "dnet:result_typologies"}, "relevantdate": [], "collectedfrom": [{"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "key": "10|openaire____::9e3be59865b2c1c335d32dae2fe7b254", "value": "Datacite"}], "id": "50|datacite____::d9b6bcd2782b1115ee8750cb06f335eb", "subject": [], "embargoenddate": {"dataInfo": {"provenanceaction": {"classid": "", "classname": "", "schemeid": "", "schemename": ""}, "deletedbyinference": false, "inferred": false, "inferenceprovenance": "", "invisible": false, "trust": ""}, "value": ""}, "lastupdatetimestamp": 0, "author": [{"surname": "Abhayashree", "name": "M. 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"Meoni, Evelin"}, {"surname": "Mermod", "name": "Philippe", "pid": [], "rank": 1807, "affiliation": [], "fullname": "Mermod, Philippe"}, {"surname": "Merola", "name": "Leonardo", "pid": [], "rank": 1808, "affiliation": [], "fullname": "Merola, Leonardo"}, {"surname": "Meroni", "name": "Chiara", "pid": [], "rank": 1809, "affiliation": [], "fullname": "Meroni, Chiara"}, {"surname": "Merritt", "name": "Frank", "pid": [], "rank": 1810, "affiliation": [], "fullname": "Merritt, Frank"}, {"surname": "Messina", "name": "Andrea", "pid": [], "rank": 1811, "affiliation": [], "fullname": "Messina, Andrea"}, {"surname": "Metcalfe", "name": "Jessica", "pid": [], "rank": 1812, "affiliation": [], "fullname": "Metcalfe, Jessica"}, {"surname": "Mete", "name": "Alaettin Serhan", "pid": [], "rank": 1813, "affiliation": [], "fullname": "Mete, Alaettin Serhan"}, {"surname": "Meuser", "name": "Stefan", "pid": [], "rank": 1814, "affiliation": [], "fullname": "Meuser, Stefan"}, {"surname": "Meyer", "name": "Carsten", "pid": [], "rank": 1815, "affiliation": [], "fullname": "Meyer, Carsten"}, {"surname": "Meyer", "name": "Jean-Pierre", "pid": [], "rank": 1816, "affiliation": [], "fullname": "Meyer, Jean-Pierre"}, {"surname": "Meyer", "name": "Jochen", "pid": [], "rank": 1817, "affiliation": [], "fullname": "Meyer, Jochen"}, {"surname": "Meyer", "name": "Joerg", "pid": [], "rank": 1818, "affiliation": [], "fullname": "Meyer, Joerg"}, {"surname": "Meyer", "name": "Thomas Christian", "pid": [], "rank": 1819, "affiliation": [], "fullname": "Meyer, Thomas Christian"}, {"surname": "Meyer", "name": "W. 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1837, "affiliation": [], "fullname": "Milstead, David"}, {"surname": "Milstein", "name": "Dmitry", "pid": [], "rank": 1838, "affiliation": [], "fullname": "Milstein, Dmitry"}, {"surname": "Minaenko", "name": "Andrey", "pid": [], "rank": 1839, "affiliation": [], "fullname": "Minaenko, Andrey"}, {"surname": "Minano", "name": "Mercedes", "pid": [], "rank": 1840, "affiliation": [], "fullname": "Minano, Mercedes"}, {"surname": "Minashvili", "name": "Irakli", "pid": [], "rank": 1841, "affiliation": [], "fullname": "Minashvili, Irakli"}, {"surname": "Mincer", "name": "Allen", "pid": [], "rank": 1842, "affiliation": [], "fullname": "Mincer, Allen"}, {"surname": "Mindur", "name": "Bartosz", "pid": [], "rank": 1843, "affiliation": [], "fullname": "Mindur, Bartosz"}, {"surname": "Mineev", "name": "Mikhail", "pid": [], "rank": 1844, "affiliation": [], "fullname": "Mineev, Mikhail"}, {"surname": "Ming", "name": "Yao", "pid": [], "rank": 1845, "affiliation": [], "fullname": "Ming, Yao"}, {"surname": "Mir", "name": "Lluisa-Maria", "pid": [], "rank": 1846, "affiliation": [], "fullname": "Mir, Lluisa-Maria"}, {"surname": "Mirabelli", "name": "Giovanni", "pid": [], "rank": 1847, "affiliation": [], "fullname": "Mirabelli, Giovanni"}, {"surname": "Miralles Verge", "name": "Lluis", "pid": [], "rank": 1848, "affiliation": [], "fullname": "Miralles Verge, Lluis"}, {"surname": "Misiejuk", "name": "Andrzej", "pid": [], "rank": 1849, "affiliation": [], "fullname": "Misiejuk, Andrzej"}, {"surname": "Mitrevski", "name": "Jovan", "pid": [], "rank": 1850, "affiliation": [], "fullname": "Mitrevski, Jovan"}, {"surname": "Mitrofanov", "name": "Gennady", "pid": [], "rank": 1851, "affiliation": [], "fullname": "Mitrofanov, Gennady"}, {"surname": "Mitsou", "name": "Vasiliki A.", "pid": [], "rank": 1852, "affiliation": [], "fullname": "Mitsou, Vasiliki A."}, {"surname": "Mitsui", "name": "Shingo", "pid": [], "rank": 1853, "affiliation": [], "fullname": "Mitsui, Shingo"}, {"surname": "Miyagawa", "name": "Paul", "pid": [], "rank": 1854, "affiliation": [], "fullname": "Miyagawa, Paul"}, {"surname": "Miyazaki", "name": "Kazuki", "pid": [], "rank": 1855, "affiliation": [], "fullname": "Miyazaki, Kazuki"}, {"surname": "Mjornmark", "name": "Jan-Ulf", "pid": [], "rank": 1856, "affiliation": [], "fullname": "Mjornmark, Jan-Ulf"}, {"surname": "Moa", "name": "Torbjoern", "pid": [], "rank": 1857, "affiliation": [], "fullname": "Moa, Torbjoern"}, {"surname": "Mockett", "name": "Paul", "pid": [], "rank": 1858, "affiliation": [], "fullname": "Mockett, Paul"}, {"surname": "Moed", "name": "Shulamit", "pid": [], "rank": 1859, "affiliation": [], "fullname": "Moed, Shulamit"}, {"surname": "Moeller", "name": "Victoria", "pid": [], "rank": 1860, "affiliation": [], "fullname": "Moeller, Victoria"}, {"surname": "Monig", "name": "Klaus", "pid": [], "rank": 1861, "affiliation": [], "fullname": "Monig, Klaus"}, {"surname": "Moser", "name": "Nicolas", "pid": [], "rank": 1862, "affiliation": [], "fullname": "Moser, Nicolas"}, {"surname": "Mohapatra", "name": "Soumya", "pid": [], "rank": 1863, "affiliation": [], "fullname": "Mohapatra, Soumya"}, {"surname": "Mohn", "name": "Bjarte", "pid": [], "rank": 1864, "affiliation": [], "fullname": "Mohn, Bjarte"}, {"surname": "Mohr", "name": "Wolfgang", "pid": [], "rank": 1865, "affiliation": [], "fullname": "Mohr, Wolfgang"}, {"surname": "Mohrdieck-Mock", "name": "Susanne", "pid": [], "rank": 1866, "affiliation": [], "fullname": "Mohrdieck-Mock, Susanne"}, {"surname": "Moisseev", "name": "Artemy", "pid": [], "rank": 1867, "affiliation": [], "fullname": "Moisseev, Artemy"}, {"surname": "Moles-Valls", "name": "Regina", "pid": [], "rank": 1868, "affiliation": [], "fullname": "Moles-Valls, Regina"}, {"surname": "Molina-Perez", "name": "Jorge", "pid": [], "rank": 1869, "affiliation": [], "fullname": "Molina-Perez, Jorge"}, {"surname": "Moneta", "name": "Lorenzo", "pid": [], "rank": 1870, "affiliation": [], "fullname": "Moneta, Lorenzo"}, {"surname": "Monk", "name": "James", "pid": [], "rank": 1871, "affiliation": [], "fullname": "Monk, James"}, {"surname": "Monnier", "name": "Emmanuel", "pid": [], "rank": 1872, "affiliation": [], "fullname": "Monnier, Emmanuel"}, {"surname": "Montesano", "name": "Simone", "pid": [], "rank": 1873, "affiliation": [], "fullname": "Montesano, Simone"}, {"surname": "Monticelli", "name": "Fernando", "pid": [], "rank": 1874, "affiliation": [], "fullname": "Monticelli, Fernando"}, {"surname": "Monzani", "name": "Simone", "pid": [], "rank": 1875, "affiliation": [], "fullname": "Monzani, Simone"}, {"surname": "Moore", "name": "Roger", "pid": [], "rank": 1876, "affiliation": [], "fullname": "Moore, Roger"}, {"surname": "Moorhead", "name": "Gareth", "pid": [], "rank": 1877, "affiliation": [], "fullname": "Moorhead, Gareth"}, {"surname": "Mora Herrera", "name": "Clemencia", "pid": [], "rank": 1878, "affiliation": [], "fullname": "Mora Herrera, Clemencia"}, {"surname": "Moraes", "name": "Arthur", "pid": [], "rank": 1879, "affiliation": [], "fullname": "Moraes, Arthur"}, {"surname": "Morais", "name": "Antonio", "pid": [], "rank": 1880, "affiliation": [], "fullname": "Morais, Antonio"}, {"surname": "Morange", "name": "Nicolas", "pid": [], "rank": 1881, "affiliation": [], "fullname": "Morange, Nicolas"}, {"surname": "Morel", "name": "Julien", "pid": [], "rank": 1882, "affiliation": [], "fullname": "Morel, Julien"}, {"surname": "Morello", "name": "Gianfranco", "pid": [], "rank": 1883, "affiliation": [], "fullname": "Morello, Gianfranco"}, {"surname": "Moreno", "name": "Deywis", "pid": [], "rank": 1884, "affiliation": [], "fullname": "Moreno, Deywis"}, {"surname": "Moreno Lla\u0301cer", "name": "Mari\u0301a", "pid": [], "rank": 1885, "affiliation": [], "fullname": "Moreno Ll\u00e1cer, Mar\u00eda"}, {"surname": "Morettini", "name": "Paolo", "pid": [], "rank": 1886, "affiliation": [], "fullname": "Morettini, Paolo"}, {"surname": "Morii", "name": "Masahiro", "pid": [], "rank": 1887, "affiliation": [], "fullname": "Morii, Masahiro"}, {"surname": "Morin", "name": "Jerome", "pid": [], "rank": 1888, "affiliation": [], "fullname": "Morin, Jerome"}, {"surname": "Morita", "name": "Youhei", "pid": [], "rank": 1889, "affiliation": [], "fullname": "Morita, Youhei"}, {"surname": "Morley", "name": "Anthony Keith", "pid": [], "rank": 1890, "affiliation": [], "fullname": "Morley, Anthony Keith"}, {"surname": "Mornacchi", "name": "Giuseppe", "pid": [], "rank": 1891, "affiliation": [], "fullname": "Mornacchi, Giuseppe"}, {"surname": "Morone", "name": "Maria-Christina", "pid": [], "rank": 1892, "affiliation": [], "fullname": "Morone, Maria-Christina"}, {"surname": "Morozov", "name": "Sergey", "pid": [], "rank": 1893, "affiliation": [], "fullname": "Morozov, Sergey"}, {"surname": "Morris", "name": "John", "pid": [], "rank": 1894, "affiliation": [], "fullname": "Morris, John"}, {"surname": "Moser", "name": "Hans-Guenther", "pid": [], "rank": 1895, "affiliation": [], "fullname": "Moser, Hans-Guenther"}, {"surname": "Mosidze", "name": "Maia", "pid": [], "rank": 1896, "affiliation": [], "fullname": "Mosidze, Maia"}, {"surname": "Moss", "name": "Josh", "pid": [], "rank": 1897, "affiliation": [], "fullname": "Moss, Josh"}, {"surname": "Mount", "name": "Richard", "pid": [], "rank": 1898, "affiliation": [], "fullname": "Mount, Richard"}, {"surname": "Mountricha", "name": "Eleni", "pid": [], "rank": 1899, "affiliation": [], "fullname": "Mountricha, Eleni"}, {"surname": "Mouraviev", "name": "Sergei", "pid": [], "rank": 1900, "affiliation": [], "fullname": "Mouraviev, Sergei"}, {"surname": "Moyse", "name": "Edward", "pid": [], "rank": 1901, "affiliation": [], "fullname": "Moyse, Edward"}, {"surname": "Mudrinic", "name": "Mihajlo", "pid": [], "rank": 1902, "affiliation": [], "fullname": "Mudrinic, Mihajlo"}, {"surname": "Mueller", "name": "Felix", "pid": [], "rank": 1903, "affiliation": [], "fullname": "Mueller, Felix"}, {"surname": "Mueller", "name": "James", "pid": [], "rank": 1904, "affiliation": [], "fullname": "Mueller, James"}, {"surname": "Mueller", "name": "Klemens", "pid": [], "rank": 1905, "affiliation": [], "fullname": "Mueller, Klemens"}, {"surname": "Muller", "name": "Thomas", "pid": [], "rank": 1906, "affiliation": [], "fullname": "Muller, Thomas"}, {"surname": "Muenstermann", "name": "Daniel", "pid": [], "rank": 1907, "affiliation": [], "fullname": "Muenstermann, Daniel"}, {"surname": "Muijs", "name": "Sandra", "pid": [], "rank": 1908, "affiliation": [], "fullname": "Muijs, Sandra"}, {"surname": "Muir", "name": "Alex", "pid": [], "rank": 1909, "affiliation": [], "fullname": "Muir, Alex"}, {"surname": "Munwes", "name": "Yonathan", "pid": [], "rank": 1910, "affiliation": [], "fullname": "Munwes, Yonathan"}, {"surname": "Murakami", "name": "Koichi", "pid": [], "rank": 1911, "affiliation": [], "fullname": "Murakami, Koichi"}, {"surname": "Murray", "name": "Bill", "pid": [], "rank": 1912, "affiliation": [], "fullname": "Murray, Bill"}, {"surname": "Mussche", "name": "Ido", "pid": [], "rank": 1913, "affiliation": [], "fullname": "Mussche, Ido"}, {"surname": "Musto", "name": "Elisa", "pid": [], "rank": 1914, "affiliation": [], "fullname": "Musto, Elisa"}, {"surname": "Myagkov", "name": "Alexey", "pid": [], "rank": 1915, "affiliation": [], "fullname": "Myagkov, Alexey"}, {"surname": "Myska", "name": "Miroslav", "pid": [], "rank": 1916, "affiliation": [], "fullname": "Myska, Miroslav"}, {"surname": "Nadal", "name": "Jordi", "pid": [], "rank": 1917, "affiliation": [], "fullname": "Nadal, Jordi"}, {"surname": "Nagai", "name": "Koichi", "pid": [], "rank": 1918, "affiliation": [], "fullname": "Nagai, Koichi"}, {"surname": "Nagano", "name": "Kunihiro", "pid": [], "rank": 1919, "affiliation": [], "fullname": "Nagano, Kunihiro"}, {"surname": "Nagasaka", "name": "Yasushi", "pid": [], "rank": 1920, "affiliation": [], "fullname": "Nagasaka, Yasushi"}, {"surname": "Nairz", "name": "Armin Michael", "pid": [], "rank": 1921, "affiliation": [], "fullname": "Nairz, Armin Michael"}, {"surname": "Nakahama", "name": "Yu", "pid": [], "rank": 1922, "affiliation": [], "fullname": "Nakahama, Yu"}, {"surname": "Nakamura", "name": "Koji", "pid": [], "rank": 1923, "affiliation": [], "fullname": "Nakamura, Koji"}, {"surname": "Nakano", "name": "Itsuo", "pid": [], "rank": 1924, "affiliation": [], "fullname": "Nakano, Itsuo"}, {"surname": "Nanava", "name": "Gizo", "pid": [], "rank": 1925, "affiliation": [], "fullname": "Nanava, Gizo"}, {"surname": "Napier", "name": "Austin", "pid": [], "rank": 1926, "affiliation": [], "fullname": "Napier, Austin"}, {"surname": "Nash", "name": "Michael", "pid": [], "rank": 1927, "affiliation": [], "fullname": "Nash, Michael"}, {"surname": "Nation", "name": "Nigel", "pid": [], "rank": 1928, "affiliation": [], "fullname": "Nation, Nigel"}, {"surname": "Nattermann", "name": "Till", "pid": [], "rank": 1929, "affiliation": [], "fullname": "Nattermann, Till"}, {"surname": "Naumann", "name": "Thomas", "pid": [], "rank": 1930, "affiliation": [], "fullname": "Naumann, Thomas"}, {"surname": "Navarro", "name": "Gabriela", "pid": [], "rank": 1931, "affiliation": [], "fullname": "Navarro, Gabriela"}, {"surname": "Neal", "name": "Homer", "pid": [], "rank": 1932, "affiliation": [], "fullname": "Neal, Homer"}, {"surname": "Nebot", "name": "Eduardo", "pid": [], "rank": 1933, "affiliation": [], "fullname": "Nebot, Eduardo"}, {"surname": "Nechaeva", "name": "Polina", "pid": [], "rank": 1934, "affiliation": [], "fullname": "Nechaeva, Polina"}, {"surname": "Negri", "name": "Andrea", "pid": [], "rank": 1935, "affiliation": [], "fullname": "Negri, Andrea"}, {"surname": "Negri", "name": "Guido", "pid": [], "rank": 1936, "affiliation": [], "fullname": "Negri, Guido"}, {"surname": "Nektarijevic", "name": "Snezana", "pid": [], "rank": 1937, "affiliation": [], "fullname": "Nektarijevic, Snezana"}, {"surname": "Nelson", "name": "Andrew", "pid": [], "rank": 1938, "affiliation": [], "fullname": "Nelson, Andrew"}, {"surname": "Nelson", "name": "Silke", "pid": [], "rank": 1939, "affiliation": [], "fullname": "Nelson, Silke"}, {"surname": "Nelson", "name": "Timothy Knight", "pid": [], "rank": 1940, "affiliation": [], "fullname": "Nelson, Timothy Knight"}, {"surname": "Nemecek", "name": "Stanislav", "pid": [], "rank": 1941, "affiliation": [], "fullname": "Nemecek, Stanislav"}, {"surname": "Nemethy", "name": "Peter", "pid": [], "rank": 1942, "affiliation": [], "fullname": "Nemethy, Peter"}, {"surname": "Nepomuceno", "name": "Andre Asevedo", "pid": [], "rank": 1943, "affiliation": [], "fullname": "Nepomuceno, Andre Asevedo"}, {"surname": "Nessi", "name": "Marzio", "pid": [], "rank": 1944, "affiliation": [], "fullname": "Nessi, Marzio"}, {"surname": "Nesterov", "name": "Stanislav", "pid": [], "rank": 1945, "affiliation": [], "fullname": "Nesterov, Stanislav"}, {"surname": "Neubauer", "name": "Mark", "pid": [], "rank": 1946, "affiliation": [], "fullname": "Neubauer, Mark"}, {"surname": "Neusiedl", "name": "Andrea", "pid": [], "rank": 1947, "affiliation": [], "fullname": "Neusiedl, Andrea"}, {"surname": "Neves", "name": "Ricardo", "pid": [], "rank": 1948, "affiliation": [], "fullname": "Neves, Ricardo"}, {"surname": "Nevski", "name": "Pavel", "pid": [], "rank": 1949, "affiliation": [], "fullname": "Nevski, Pavel"}, {"surname": "Newman", "name": "Paul", "pid": [], "rank": 1950, "affiliation": [], "fullname": "Newman, Paul"}, {"surname": "Nickerson", "name": "Richard", "pid": [], "rank": 1951, "affiliation": [], "fullname": "Nickerson, Richard"}, {"surname": "Nicolaidou", "name": "Rosy", "pid": [], "rank": 1952, "affiliation": [], "fullname": "Nicolaidou, Rosy"}, {"surname": "Nicolas", "name": "Ludovic", "pid": [], "rank": 1953, "affiliation": [], "fullname": "Nicolas, Ludovic"}, {"surname": "Nicquevert", "name": "Bertrand", "pid": [], "rank": 1954, "affiliation": [], "fullname": "Nicquevert, Bertrand"}, {"surname": "Niedercorn", "name": "Francois", "pid": [], "rank": 1955, "affiliation": [], "fullname": "Niedercorn, Francois"}, {"surname": "Nielsen", "name": "Jason", "pid": [], "rank": 1956, "affiliation": [], "fullname": "Nielsen, Jason"}, {"surname": "Niinikoski", "name": "Tapio", "pid": [], "rank": 1957, "affiliation": [], "fullname": "Niinikoski, Tapio"}, {"surname": "Nikiforov", "name": "Andriy", "pid": [], "rank": 1958, "affiliation": [], "fullname": "Nikiforov, Andriy"}, {"surname": "Nikolaenko", "name": "Vladimir", "pid": [], "rank": 1959, "affiliation": [], "fullname": "Nikolaenko, Vladimir"}, {"surname": "Nikolaev", "name": "Kirill", "pid": [], "rank": 1960, "affiliation": [], "fullname": "Nikolaev, Kirill"}, {"surname": "Nikolic-Audit", "name": "Irena", "pid": [], "rank": 1961, "affiliation": [], "fullname": "Nikolic-Audit, Irena"}, {"surname": "Nikolopoulos", "name": "Konstantinos", "pid": [], "rank": 1962, "affiliation": [], "fullname": "Nikolopoulos, Konstantinos"}, {"surname": "Nilsen", "name": "Henrik", "pid": [], "rank": 1963, "affiliation": [], "fullname": "Nilsen, Henrik"}, {"surname": "Nilsson", "name": "Paul", "pid": [], "rank": 1964, "affiliation": [], "fullname": "Nilsson, Paul"}, {"surname": "Ninomiya", "name": "Yoichi", "pid": [], "rank": 1965, "affiliation": [], "fullname": "Ninomiya, Yoichi"}, {"surname": "Nisati", "name": "Aleandro", "pid": [], "rank": 1966, "affiliation": [], "fullname": "Nisati, Aleandro"}, {"surname": "Nishiyama", "name": "Tomonori", "pid": [], "rank": 1967, "affiliation": [], "fullname": "Nishiyama, Tomonori"}, {"surname": "Nisius", "name": "Richard", "pid": [], "rank": 1968, "affiliation": [], "fullname": "Nisius, Richard"}, {"surname": "Nodulman", "name": "Lawrence", "pid": [], "rank": 1969, "affiliation": [], "fullname": "Nodulman, Lawrence"}, {"surname": "Nomachi", "name": "Masaharu", "pid": [], "rank": 1970, "affiliation": [], "fullname": "Nomachi, Masaharu"}, {"surname": "Nomidis", "name": "Ioannis", "pid": [], "rank": 1971, "affiliation": [], "fullname": "Nomidis, Ioannis"}, {"surname": "Nomoto", "name": "Hiroshi", "pid": [], "rank": 1972, "affiliation": [], "fullname": "Nomoto, Hiroshi"}, {"surname": "Nordberg", "name": "Markus", "pid": [], "rank": 1973, "affiliation": [], "fullname": "Nordberg, Markus"}, {"surname": "Nordkvist", "name": "Bjoern", "pid": [], "rank": 1974, "affiliation": [], "fullname": "Nordkvist, Bjoern"}, {"surname": "Norton", "name": "Peter", "pid": [], "rank": 1975, "affiliation": [], "fullname": "Norton, Peter"}, {"surname": "Novakova", "name": "Jana", "pid": [], "rank": 1976, "affiliation": [], "fullname": "Novakova, Jana"}, {"surname": "Nozaki", "name": "Mitsuaki", "pid": [], "rank": 1977, "affiliation": [], "fullname": "Nozaki, Mitsuaki"}, {"surname": "Nozicka", "name": "Miroslav", "pid": [], "rank": 1978, "affiliation": [], "fullname": "Nozicka, Miroslav"}, {"surname": "Nugent", "name": "Ian Michael", "pid": [], "rank": 1979, "affiliation": [], "fullname": "Nugent, Ian Michael"}, {"surname": "Nuncio-Quiroz", "name": "Adriana-Elizabeth", "pid": [], "rank": 1980, "affiliation": [], "fullname": "Nuncio-Quiroz, Adriana-Elizabeth"}, {"surname": "Nunes Hanninger", "name": "Guilherme", "pid": [], "rank": 1981, "affiliation": [], "fullname": "Nunes Hanninger, Guilherme"}, {"surname": "Nunnemann", "name": "Thomas", "pid": [], "rank": 1982, "affiliation": [], "fullname": "Nunnemann, Thomas"}, {"surname": "Nurse", "name": "Emily", "pid": [], "rank": 1983, "affiliation": [], "fullname": "Nurse, Emily"}, {"surname": "Nyman", "name": "Tommi", "pid": [], "rank": 1984, "affiliation": [], "fullname": "Nyman, Tommi"}, {"surname": "O Brien", "name": "Brendan Joseph", "pid": [], "rank": 1985, "affiliation": [], "fullname": "O'Brien, Brendan Joseph"}, {"surname": "O Neale", "name": "Steve", "pid": [], "rank": 1986, "affiliation": [], "fullname": "O'Neale, Steve"}, {"surname": "O Neil", "name": "Dugan", "pid": [], "rank": 1987, "affiliation": [], "fullname": "O'Neil, Dugan"}, {"surname": "O Shea", "name": "Val", "pid": [], "rank": 1988, "affiliation": [], "fullname": "O'Shea, Val"}, {"surname": "Oakham", "name": "Gerald", "pid": [], "rank": 1989, "affiliation": [], "fullname": "Oakham, Gerald"}, {"surname": "Oberlack", "name": "Horst", "pid": [], "rank": 1990, "affiliation": [], "fullname": "Oberlack, Horst"}, {"surname": "Ocariz", "name": "Jose", "pid": [], "rank": 1991, "affiliation": [], "fullname": "Ocariz, Jose"}, {"surname": "Ochi", "name": "Atsuhiko", "pid": [], "rank": 1992, "affiliation": [], "fullname": "Ochi, Atsuhiko"}, {"surname": "Oda", "name": "Susumu", "pid": [], "rank": 1993, "affiliation": [], "fullname": "Oda, Susumu"}, {"surname": "Odaka", "name": "Shigeru", "pid": [], "rank": 1994, "affiliation": [], "fullname": "Odaka, Shigeru"}, {"surname": "Odier", "name": "Jerome", "pid": [], "rank": 1995, "affiliation": [], "fullname": "Odier, Jerome"}, {"surname": "Ogren", "name": "Harold", "pid": [], "rank": 1996, "affiliation": [], "fullname": "Ogren, Harold"}, {"surname": "Oh", "name": "Alexander", "pid": [], "rank": 1997, "affiliation": [], "fullname": "Oh, Alexander"}, {"surname": "Oh", "name": "Seog", "pid": [], "rank": 1998, "affiliation": [], "fullname": "Oh, Seog"}, {"surname": "Ohm", "name": "Christian", "pid": [], "rank": 1999, "affiliation": [], "fullname": "Ohm, Christian"}, {"surname": "Ohshima", "name": "Takayoshi", "pid": [], "rank": 2000, "affiliation": [], "fullname": "Ohshima, Takayoshi"}, {"surname": "Ohshita", "name": "Hidetoshi", "pid": [], "rank": 2001, "affiliation": [], "fullname": "Ohshita, Hidetoshi"}, {"surname": "Ohska", "name": "Tokio Kenneth", "pid": [], "rank": 2002, "affiliation": [], "fullname": "Ohska, Tokio Kenneth"}, {"surname": "Ohsugi", "name": "Takashi", "pid": [], "rank": 2003, "affiliation": [], "fullname": "Ohsugi, Takashi"}, {"surname": "Okada", "name": "Shogo", "pid": [], "rank": 2004, "affiliation": [], "fullname": "Okada, Shogo"}, {"surname": "Okawa", "name": "Hideki", "pid": [], "rank": 2005, "affiliation": [], "fullname": "Okawa, Hideki"}, {"surname": "Okumura", "name": "Yasuyuki", "pid": [], "rank": 2006, "affiliation": [], "fullname": "Okumura, Yasuyuki"}, {"surname": "Okuyama", "name": "Toyonobu", "pid": [], "rank": 2007, "affiliation": [], "fullname": "Okuyama, Toyonobu"}, {"surname": "Olcese", "name": "Marco", "pid": [], "rank": 2008, "affiliation": [], "fullname": "Olcese, Marco"}, {"surname": "Olchevski", "name": "Alexander", "pid": [], "rank": 2009, "affiliation": [], "fullname": "Olchevski, Alexander"}, {"surname": "Oliveira", "name": "Miguel Alfonso", "pid": [], "rank": 2010, "affiliation": [], "fullname": "Oliveira, Miguel Alfonso"}, {"surname": "Oliveira Damazio", "name": "Denis", "pid": [], "rank": 2011, "affiliation": [], "fullname": "Oliveira Damazio, Denis"}, {"surname": "Oliver Garcia", "name": "Elena", "pid": [], "rank": 2012, "affiliation": [], "fullname": "Oliver Garcia, Elena"}, {"surname": "Olivito", "name": "Dominick", "pid": [], "rank": 2013, "affiliation": [], "fullname": "Olivito, Dominick"}, {"surname": "Olszewski", "name": "Andrzej", "pid": [], "rank": 2014, "affiliation": [], "fullname": "Olszewski, Andrzej"}, {"surname": "Olszowska", "name": "Jolanta", "pid": [], "rank": 2015, "affiliation": [], "fullname": "Olszowska, Jolanta"}, {"surname": "Omachi", "name": "Chihiro", "pid": [], "rank": 2016, "affiliation": [], "fullname": "Omachi, Chihiro"}, {"surname": "Onofre", "name": "Antonio", "pid": [], "rank": 2017, "affiliation": [], "fullname": "Onofre, Antonio"}, {"surname": "Onyisi", "name": "Peter", "pid": [], "rank": 2018, "affiliation": [], "fullname": "Onyisi, Peter"}, {"surname": "Oram", "name": "Christopher", "pid": [], "rank": 2019, "affiliation": [], "fullname": "Oram, Christopher"}, {"surname": "Ordonez", "name": "Gustavo", "pid": [], "rank": 2020, "affiliation": [], "fullname": "Ordonez, Gustavo"}, {"surname": "Oreglia", "name": "Mark", "pid": [], "rank": 2021, "affiliation": [], "fullname": "Oreglia, Mark"}, {"surname": 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\ No newline at end of file diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/profiles/mock_orchestrator.xml b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/profiles/mock_orchestrator.xml index 42d3f0b69..dbac007bc 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/profiles/mock_orchestrator.xml +++ b/dhp-workflows/dhp-dedup-openaire/src/test/resources/eu/dnetlib/dhp/dedup/profiles/mock_orchestrator.xml @@ -15,6 +15,8 @@ + + From 278fc9d27632e37af22806c57dfa2dce5c401c0c Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Thu, 23 Apr 2020 18:51:38 +0200 Subject: [PATCH 12/17] code formatting --- .../dnetlib/dhp/oa/dedup/SparkDedupTest.java | 34 +++++++++++++++---- 1 file changed, 27 insertions(+), 7 deletions(-) diff --git a/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java b/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java index 6a505ebb9..1773bbabd 100644 --- a/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java +++ b/dhp-workflows/dhp-dedup-openaire/src/test/java/eu/dnetlib/dhp/oa/dedup/SparkDedupTest.java @@ -118,7 +118,9 @@ public class SparkDedupTest implements Serializable { "/eu/dnetlib/dhp/dedup/conf/ds.curr.conf.json"))); lenient() - .when(isLookUpService.getResourceProfileByQuery(Mockito.contains("otherresearchproduct"))) + .when( + isLookUpService.getResourceProfileByQuery( + Mockito.contains("otherresearchproduct"))) .thenReturn( IOUtils.toString( SparkDedupTest.class.getResourceAsStream( @@ -164,7 +166,11 @@ public class SparkDedupTest implements Serializable { long orp_simrel = spark.read() - .load(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_simrel") + .load( + testOutputBasePath + + "/" + + testActionSetId + + "/otherresearchproduct_simrel") .count(); assertEquals(3432, orgs_simrel); @@ -213,7 +219,11 @@ public class SparkDedupTest implements Serializable { long orp_mergerel = spark.read() - .load(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_mergerel") + .load( + testOutputBasePath + + "/" + + testActionSetId + + "/otherresearchproduct_mergerel") .count(); assertEquals(1276, orgs_mergerel); @@ -254,7 +264,8 @@ public class SparkDedupTest implements Serializable { testOutputBasePath + "/" + testActionSetId - + "/publication_deduprecord").count(); + + "/publication_deduprecord") + .count(); long sw_deduprecord = jsc.textFile(testOutputBasePath + "/" + testActionSetId + "/software_deduprecord") .count(); @@ -262,7 +273,11 @@ public class SparkDedupTest implements Serializable { jsc.textFile(testOutputBasePath + "/" + testActionSetId + "/dataset_deduprecord") .count(); long orp_deduprecord = - jsc.textFile(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_deduprecord") + jsc.textFile( + testOutputBasePath + + "/" + + testActionSetId + + "/otherresearchproduct_deduprecord") .count(); assertEquals(82, orgs_deduprecord); @@ -296,7 +311,8 @@ public class SparkDedupTest implements Serializable { long datasource = jsc.textFile(testDedupGraphBasePath + "/datasource").count(); long softwares = jsc.textFile(testDedupGraphBasePath + "/software").count(); long dataset = jsc.textFile(testDedupGraphBasePath + "/dataset").count(); - long otherresearchproduct = jsc.textFile(testDedupGraphBasePath + "/otherresearchproduct").count(); + long otherresearchproduct = + jsc.textFile(testDedupGraphBasePath + "/otherresearchproduct").count(); long mergedOrgs = spark.read() @@ -340,7 +356,11 @@ public class SparkDedupTest implements Serializable { long mergedOrp = spark.read() - .load(testOutputBasePath + "/" + testActionSetId + "/otherresearchproduct_mergerel") + .load( + testOutputBasePath + + "/" + + testActionSetId + + "/otherresearchproduct_mergerel") .as(Encoders.bean(Relation.class)) .where("relClass=='merges'") .javaRDD() From 5100527400029c9e38b3dcda913d35fc40b8c604 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Thu, 23 Apr 2020 19:14:37 +0200 Subject: [PATCH 13/17] added default value for resulttype field --- .../dhp/schema/common/ModelConstants.java | 40 +++++++++++++++++++ .../eu/dnetlib/dhp/schema/oaf/Dataset.java | 5 +++ .../dhp/schema/oaf/OtherResearchProduct.java | 5 +++ .../dnetlib/dhp/schema/oaf/Publication.java | 5 +++ .../eu/dnetlib/dhp/schema/oaf/Result.java | 3 ++ .../eu/dnetlib/dhp/schema/oaf/Software.java | 5 +++ 6 files changed, 63 insertions(+) create mode 100644 dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java new file mode 100644 index 000000000..dbb080d7c --- /dev/null +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelConstants.java @@ -0,0 +1,40 @@ +package eu.dnetlib.dhp.schema.common; + +import eu.dnetlib.dhp.schema.oaf.Qualifier; + +public class ModelConstants { + + public static final String DNET_RESULT_TYPOLOGIES = "dnet:result_typologies"; + + public static final String DATASET_RESULTTYPE_CLASSID = "dataset"; + public static final String PUBLICATION_RESULTTYPE_CLASSID = "publication"; + public static final String SOFTWARE_RESULTTYPE_CLASSID = "software"; + public static final String ORP_RESULTTYPE_CLASSID = "other"; + + public static Qualifier PUBLICATION_DEFAULT_RESULTTYPE = new Qualifier(); + public static Qualifier DATASET_DEFAULT_RESULTTYPE = new Qualifier(); + public static Qualifier SOFTWARE_DEFAULT_RESULTTYPE = new Qualifier(); + public static Qualifier ORP_DEFAULT_RESULTTYPE = new Qualifier(); + + static { + PUBLICATION_DEFAULT_RESULTTYPE.setClassid(PUBLICATION_RESULTTYPE_CLASSID); + PUBLICATION_DEFAULT_RESULTTYPE.setClassname(PUBLICATION_RESULTTYPE_CLASSID); + PUBLICATION_DEFAULT_RESULTTYPE.setSchemeid(DNET_RESULT_TYPOLOGIES); + PUBLICATION_DEFAULT_RESULTTYPE.setSchemename(DNET_RESULT_TYPOLOGIES); + + DATASET_DEFAULT_RESULTTYPE.setClassid(DATASET_RESULTTYPE_CLASSID); + DATASET_DEFAULT_RESULTTYPE.setClassname(DATASET_RESULTTYPE_CLASSID); + DATASET_DEFAULT_RESULTTYPE.setSchemeid(DNET_RESULT_TYPOLOGIES); + DATASET_DEFAULT_RESULTTYPE.setSchemename(DNET_RESULT_TYPOLOGIES); + + SOFTWARE_DEFAULT_RESULTTYPE.setClassid(SOFTWARE_RESULTTYPE_CLASSID); + SOFTWARE_DEFAULT_RESULTTYPE.setClassname(SOFTWARE_RESULTTYPE_CLASSID); + SOFTWARE_DEFAULT_RESULTTYPE.setSchemeid(DNET_RESULT_TYPOLOGIES); + SOFTWARE_DEFAULT_RESULTTYPE.setSchemename(DNET_RESULT_TYPOLOGIES); + + ORP_DEFAULT_RESULTTYPE.setClassid(ORP_RESULTTYPE_CLASSID); + ORP_DEFAULT_RESULTTYPE.setClassname(ORP_RESULTTYPE_CLASSID); + ORP_DEFAULT_RESULTTYPE.setSchemeid(DNET_RESULT_TYPOLOGIES); + ORP_DEFAULT_RESULTTYPE.setSchemename(DNET_RESULT_TYPOLOGIES); + } +} diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java index fef6ed748..ba9a62eb7 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java @@ -1,5 +1,6 @@ package eu.dnetlib.dhp.schema.oaf; +import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.List; import java.util.Objects; @@ -20,6 +21,10 @@ public class Dataset extends Result implements Serializable { private List geolocation; + public Dataset() { + setResulttype(ModelConstants.DATASET_DEFAULT_RESULTTYPE); + } + public Field getStoragedate() { return storagedate; } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java index 00b24a374..13a8e3c45 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java @@ -1,5 +1,6 @@ package eu.dnetlib.dhp.schema.oaf; +import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.List; import java.util.Objects; @@ -12,6 +13,10 @@ public class OtherResearchProduct extends Result implements Serializable { private List> tool; + public OtherResearchProduct() { + setResulttype(ModelConstants.ORP_DEFAULT_RESULTTYPE); + } + public List> getContactperson() { return contactperson; } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java index 1542b7933..df2ecfa1b 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java @@ -1,5 +1,6 @@ package eu.dnetlib.dhp.schema.oaf; +import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.Objects; @@ -8,6 +9,10 @@ public class Publication extends Result implements Serializable { // publication specific private Journal journal; + public Publication() { + setResulttype(ModelConstants.PUBLICATION_DEFAULT_RESULTTYPE); + } + public Journal getJournal() { return journal; } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java index f9d9756d5..f18a9fa0c 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java @@ -231,6 +231,9 @@ public class Result extends OafEntity implements Serializable { instance = mergeLists(instance, r.getInstance()); + if (r.getBestaccessright() != null && compareTrust(this, r) < 0) + bestaccessright = r.getBestaccessright(); + if (r.getResulttype() != null && compareTrust(this, r) < 0) resulttype = r.getResulttype(); if (r.getLanguage() != null && compareTrust(this, r) < 0) language = r.getLanguage(); diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java index a7d36638e..801c1f2f1 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java @@ -1,5 +1,6 @@ package eu.dnetlib.dhp.schema.oaf; +import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.List; import java.util.Objects; @@ -14,6 +15,10 @@ public class Software extends Result implements Serializable { private Qualifier programmingLanguage; + public Software() { + setResulttype(ModelConstants.SOFTWARE_DEFAULT_RESULTTYPE); + } + public List> getDocumentationUrl() { return documentationUrl; } From 48157e0fc4ab4d901aeb3fb702e64e06247549a5 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Fri, 24 Apr 2020 14:32:28 +0200 Subject: [PATCH 14/17] GraphHiveImporterJob moved in dedicate package --- .../dnetlib/dhp/oa/graph/{ => hive}/GraphHiveImporterJob.java | 2 +- .../eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml | 2 +- .../java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJobTest.java | 1 + 3 files changed, 3 insertions(+), 2 deletions(-) rename dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/{ => hive}/GraphHiveImporterJob.java (98%) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/hive/GraphHiveImporterJob.java similarity index 98% rename from dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java rename to dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/hive/GraphHiveImporterJob.java index bec3810f9..2eb1e5bb2 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJob.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/hive/GraphHiveImporterJob.java @@ -1,4 +1,4 @@ -package eu.dnetlib.dhp.oa.graph; +package eu.dnetlib.dhp.oa.graph.hive; import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkHiveSession; diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml index dc1fa092d..e837ac6b3 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/workflow.xml @@ -83,7 +83,7 @@ yarn cluster MapGraphAsHiveDB - eu.dnetlib.dhp.oa.graph.GraphHiveImporterJob + eu.dnetlib.dhp.oa.graph.hive.GraphHiveImporterJob dhp-graph-mapper-${projectVersion}.jar --executor-memory=${sparkExecutorMemory} diff --git a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJobTest.java b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJobTest.java index e35339bfa..785ed3022 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJobTest.java +++ b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/GraphHiveImporterJobTest.java @@ -1,5 +1,6 @@ package eu.dnetlib.dhp.oa.graph; +import eu.dnetlib.dhp.oa.graph.hive.GraphHiveImporterJob; import eu.dnetlib.dhp.schema.common.ModelSupport; import java.io.IOException; import java.nio.file.Files; From a3e480d1c9d249585e1f427bf682c6c30e159158 Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Fri, 24 Apr 2020 14:36:53 +0200 Subject: [PATCH 15/17] implmented DispatchEntitiesApplication using spark2 datasets --- .../raw/DispatchEntitiesApplication.java | 48 +++++++------------ 1 file changed, 17 insertions(+), 31 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/DispatchEntitiesApplication.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/DispatchEntitiesApplication.java index 4ee0ce3a4..a08870219 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/DispatchEntitiesApplication.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/DispatchEntitiesApplication.java @@ -2,16 +2,18 @@ package eu.dnetlib.dhp.oa.graph.raw; import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkSession; -import com.fasterxml.jackson.databind.ObjectMapper; import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.common.HdfsSupport; +import eu.dnetlib.dhp.schema.common.ModelSupport; import eu.dnetlib.dhp.schema.oaf.*; import java.util.Optional; import org.apache.commons.io.IOUtils; import org.apache.commons.lang3.StringUtils; -import org.apache.hadoop.io.compress.GzipCodec; import org.apache.spark.SparkConf; -import org.apache.spark.api.java.JavaSparkContext; +import org.apache.spark.api.java.function.FilterFunction; +import org.apache.spark.api.java.function.MapFunction; +import org.apache.spark.sql.Encoders; +import org.apache.spark.sql.SaveMode; import org.apache.spark.sql.SparkSession; import org.slf4j.Logger; import org.slf4j.LoggerFactory; @@ -20,8 +22,6 @@ public class DispatchEntitiesApplication { private static final Logger log = LoggerFactory.getLogger(DispatchEntitiesApplication.class); - private static final ObjectMapper OBJECT_MAPPER = new ObjectMapper(); - public static void main(final String[] args) throws Exception { final ArgumentApplicationParser parser = new ArgumentApplicationParser( @@ -45,15 +45,9 @@ public class DispatchEntitiesApplication { isSparkSessionManaged, spark -> { removeOutputDir(spark, targetPath); - - processEntity(spark, Publication.class, sourcePath, targetPath); - processEntity(spark, Dataset.class, sourcePath, targetPath); - processEntity(spark, Software.class, sourcePath, targetPath); - processEntity(spark, OtherResearchProduct.class, sourcePath, targetPath); - processEntity(spark, Datasource.class, sourcePath, targetPath); - processEntity(spark, Organization.class, sourcePath, targetPath); - processEntity(spark, Project.class, sourcePath, targetPath); - processEntity(spark, Relation.class, sourcePath, targetPath); + ModelSupport.oafTypes + .values() + .forEach(clazz -> processEntity(spark, clazz, sourcePath, targetPath)); }); } @@ -64,26 +58,18 @@ public class DispatchEntitiesApplication { final String targetPath) { final String type = clazz.getSimpleName().toLowerCase(); - log.info(String.format("Processing entities (%s) in file: %s", type, sourcePath)); + log.info("Processing entities ({}) in file: {}", type, sourcePath); - /* spark.read() - .textFile(sourcePath) - .filter((FilterFunction) value -> isEntityType(value, type)) - .map((MapFunction) value -> StringUtils.substringAfter(value, "|"), Encoders.STRING()) - .map((MapFunction) value -> OBJECT_MAPPER.readValue(value, clazz), Encoders.bean(clazz)) - .write() - .mode(SaveMode.Overwrite) - .parquet(targetPath + "/" + type); - - */ - - JavaSparkContext.fromSparkContext(spark.sparkContext()) .textFile(sourcePath) - .filter(l -> isEntityType(l, type)) - .map(l -> StringUtils.substringAfter(l, "|")) - .saveAsTextFile( - targetPath + "/" + type, GzipCodec.class); // use repartition(XXX) ??? + .filter((FilterFunction) value -> isEntityType(value, type)) + .map( + (MapFunction) l -> StringUtils.substringAfter(l, "|"), + Encoders.STRING()) + .write() + .option("compression", "gzip") + .mode(SaveMode.Overwrite) + .text(targetPath + "/" + type); } private static boolean isEntityType(final String line, final String type) { From 268462623a2d11dd2f2b0043cb3b838d63c9242d Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Fri, 24 Apr 2020 14:42:01 +0200 Subject: [PATCH 16/17] refined definition of equals and hash methods for Oaf model classes, now based on entity identifier, while relations consider sourceid, targetid and relationship semantic; Factored out function to group Oaf objects in grouping operations; Raw graph creation procedure merges entities and relationships providing the same identity --- .../dhp/schema/common/ModelSupport.java | 64 ++++++++++++++ .../eu/dnetlib/dhp/schema/oaf/Dataset.java | 29 ------- .../eu/dnetlib/dhp/schema/oaf/Datasource.java | 85 ------------------ .../eu/dnetlib/dhp/schema/oaf/OafEntity.java | 20 +---- .../dnetlib/dhp/schema/oaf/Organization.java | 49 ----------- .../dhp/schema/oaf/OtherResearchProduct.java | 17 ---- .../eu/dnetlib/dhp/schema/oaf/Project.java | 67 -------------- .../dnetlib/dhp/schema/oaf/Publication.java | 15 ---- .../eu/dnetlib/dhp/schema/oaf/Result.java | 57 ------------ .../eu/dnetlib/dhp/schema/oaf/Software.java | 23 ----- .../PromoteActionPayloadForGraphTableJob.java | 68 +-------------- .../raw/GenerateEntitiesApplication.java | 48 ++++++---- .../oa/graph/raw/MergeClaimsApplication.java | 87 ++----------------- 13 files changed, 106 insertions(+), 523 deletions(-) diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java index bc317a6ff..ddc0db75d 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/common/ModelSupport.java @@ -3,6 +3,8 @@ package eu.dnetlib.dhp.schema.common; import com.google.common.collect.Maps; import eu.dnetlib.dhp.schema.oaf.*; import java.util.Map; +import java.util.Optional; +import java.util.function.Function; /** Oaf model utility methods. */ public class ModelSupport { @@ -146,4 +148,66 @@ public class ModelSupport { entityMapping.get(EntityType.valueOf(sourceType)).name(), entityMapping.get(EntityType.valueOf(targetType)).name()); } + + public static Function idFn() { + return x -> { + if (isSubClass(x, Relation.class)) { + return idFnForRelation(x); + } + return idFnForOafEntity(x); + }; + } + + private static String idFnForRelation(T t) { + Relation r = (Relation) t; + return Optional.ofNullable(r.getSource()) + .map( + source -> + Optional.ofNullable(r.getTarget()) + .map( + target -> + Optional.ofNullable(r.getRelType()) + .map( + relType -> + Optional.ofNullable( + r + .getSubRelType()) + .map( + subRelType -> + Optional + .ofNullable( + r + .getRelClass()) + .map( + relClass -> + String + .join( + source, + target, + relType, + subRelType, + relClass)) + .orElse( + String + .join( + source, + target, + relType, + subRelType))) + .orElse( + String + .join( + source, + target, + relType))) + .orElse( + String.join( + source, target))) + .orElse(source)) + .orElse(null); + } + + private static String idFnForOafEntity(T t) { + return ((OafEntity) t).getId(); + } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java index ba9a62eb7..50dca8104 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Dataset.java @@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf; import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.List; -import java.util.Objects; public class Dataset extends Result implements Serializable { @@ -116,32 +115,4 @@ public class Dataset extends Result implements Serializable { mergeOAFDataInfo(d); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Dataset dataset = (Dataset) o; - return Objects.equals(storagedate, dataset.storagedate) - && Objects.equals(device, dataset.device) - && Objects.equals(size, dataset.size) - && Objects.equals(version, dataset.version) - && Objects.equals(lastmetadataupdate, dataset.lastmetadataupdate) - && Objects.equals(metadataversionnumber, dataset.metadataversionnumber) - && Objects.equals(geolocation, dataset.geolocation); - } - - @Override - public int hashCode() { - return Objects.hash( - super.hashCode(), - storagedate, - device, - size, - version, - lastmetadataupdate, - metadataversionnumber, - geolocation); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java index f2755b86b..6b181ba06 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Datasource.java @@ -2,7 +2,6 @@ package eu.dnetlib.dhp.schema.oaf; import java.io.Serializable; import java.util.List; -import java.util.Objects; public class Datasource extends OafEntity implements Serializable { @@ -512,88 +511,4 @@ public class Datasource extends OafEntity implements Serializable { mergeOAFDataInfo(e); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Datasource that = (Datasource) o; - return Objects.equals(datasourcetype, that.datasourcetype) - && Objects.equals(openairecompatibility, that.openairecompatibility) - && Objects.equals(officialname, that.officialname) - && Objects.equals(englishname, that.englishname) - && Objects.equals(websiteurl, that.websiteurl) - && Objects.equals(logourl, that.logourl) - && Objects.equals(contactemail, that.contactemail) - && Objects.equals(namespaceprefix, that.namespaceprefix) - && Objects.equals(latitude, that.latitude) - && Objects.equals(longitude, that.longitude) - && Objects.equals(dateofvalidation, that.dateofvalidation) - && Objects.equals(description, that.description) - && Objects.equals(subjects, that.subjects) - && Objects.equals(odnumberofitems, that.odnumberofitems) - && Objects.equals(odnumberofitemsdate, that.odnumberofitemsdate) - && Objects.equals(odpolicies, that.odpolicies) - && Objects.equals(odlanguages, that.odlanguages) - && Objects.equals(odcontenttypes, that.odcontenttypes) - && Objects.equals(accessinfopackage, that.accessinfopackage) - && Objects.equals(releasestartdate, that.releasestartdate) - && Objects.equals(releaseenddate, that.releaseenddate) - && Objects.equals(missionstatementurl, that.missionstatementurl) - && Objects.equals(dataprovider, that.dataprovider) - && Objects.equals(serviceprovider, that.serviceprovider) - && Objects.equals(databaseaccesstype, that.databaseaccesstype) - && Objects.equals(datauploadtype, that.datauploadtype) - && Objects.equals(databaseaccessrestriction, that.databaseaccessrestriction) - && Objects.equals(datauploadrestriction, that.datauploadrestriction) - && Objects.equals(versioning, that.versioning) - && Objects.equals(citationguidelineurl, that.citationguidelineurl) - && Objects.equals(qualitymanagementkind, that.qualitymanagementkind) - && Objects.equals(pidsystems, that.pidsystems) - && Objects.equals(certificates, that.certificates) - && Objects.equals(policies, that.policies) - && Objects.equals(journal, that.journal); - } - - @Override - public int hashCode() { - return Objects.hash( - super.hashCode(), - datasourcetype, - openairecompatibility, - officialname, - englishname, - websiteurl, - logourl, - contactemail, - namespaceprefix, - latitude, - longitude, - dateofvalidation, - description, - subjects, - odnumberofitems, - odnumberofitemsdate, - odpolicies, - odlanguages, - odcontenttypes, - accessinfopackage, - releasestartdate, - releaseenddate, - missionstatementurl, - dataprovider, - serviceprovider, - databaseaccesstype, - datauploadtype, - databaseaccessrestriction, - datauploadrestriction, - versioning, - citationguidelineurl, - qualitymanagementkind, - pidsystems, - certificates, - policies, - journal); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java index 6db3b7f74..0d202395d 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OafEntity.java @@ -113,27 +113,11 @@ public abstract class OafEntity extends Oaf implements Serializable { if (o == null || getClass() != o.getClass()) return false; if (!super.equals(o)) return false; OafEntity oafEntity = (OafEntity) o; - return Objects.equals(id, oafEntity.id) - && Objects.equals(originalId, oafEntity.originalId) - && Objects.equals(collectedfrom, oafEntity.collectedfrom) - && Objects.equals(pid, oafEntity.pid) - && Objects.equals(dateofcollection, oafEntity.dateofcollection) - && Objects.equals(dateoftransformation, oafEntity.dateoftransformation) - && Objects.equals(extraInfo, oafEntity.extraInfo) - && Objects.equals(oaiprovenance, oafEntity.oaiprovenance); + return Objects.equals(id, oafEntity.id); } @Override public int hashCode() { - return Objects.hash( - super.hashCode(), - id, - originalId, - collectedfrom, - pid, - dateofcollection, - dateoftransformation, - extraInfo, - oaiprovenance); + return Objects.hash(super.hashCode(), id); } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java index 7352b4847..08e785114 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Organization.java @@ -2,7 +2,6 @@ package eu.dnetlib.dhp.schema.oaf; import java.io.Serializable; import java.util.List; -import java.util.Objects; public class Organization extends OafEntity implements Serializable { @@ -233,52 +232,4 @@ public class Organization extends OafEntity implements Serializable { country = o.getCountry() != null && compareTrust(this, e) < 0 ? o.getCountry() : country; mergeOAFDataInfo(o); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Organization that = (Organization) o; - return Objects.equals(legalshortname, that.legalshortname) - && Objects.equals(legalname, that.legalname) - && Objects.equals(alternativeNames, that.alternativeNames) - && Objects.equals(websiteurl, that.websiteurl) - && Objects.equals(logourl, that.logourl) - && Objects.equals(eclegalbody, that.eclegalbody) - && Objects.equals(eclegalperson, that.eclegalperson) - && Objects.equals(ecnonprofit, that.ecnonprofit) - && Objects.equals(ecresearchorganization, that.ecresearchorganization) - && Objects.equals(echighereducation, that.echighereducation) - && Objects.equals( - ecinternationalorganizationeurinterests, - that.ecinternationalorganizationeurinterests) - && Objects.equals(ecinternationalorganization, that.ecinternationalorganization) - && Objects.equals(ecenterprise, that.ecenterprise) - && Objects.equals(ecsmevalidated, that.ecsmevalidated) - && Objects.equals(ecnutscode, that.ecnutscode) - && Objects.equals(country, that.country); - } - - @Override - public int hashCode() { - return Objects.hash( - super.hashCode(), - legalshortname, - legalname, - alternativeNames, - websiteurl, - logourl, - eclegalbody, - eclegalperson, - ecnonprofit, - ecresearchorganization, - echighereducation, - ecinternationalorganizationeurinterests, - ecinternationalorganization, - ecenterprise, - ecsmevalidated, - ecnutscode, - country); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java index 13a8e3c45..8d8fe2d1c 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/OtherResearchProduct.java @@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf; import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.List; -import java.util.Objects; public class OtherResearchProduct extends Result implements Serializable { @@ -56,20 +55,4 @@ public class OtherResearchProduct extends Result implements Serializable { tool = mergeLists(tool, o.getTool()); mergeOAFDataInfo(e); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - OtherResearchProduct that = (OtherResearchProduct) o; - return Objects.equals(contactperson, that.contactperson) - && Objects.equals(contactgroup, that.contactgroup) - && Objects.equals(tool, that.tool); - } - - @Override - public int hashCode() { - return Objects.hash(super.hashCode(), contactperson, contactgroup, tool); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java index 7ed816fbe..ea7d3a80b 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Project.java @@ -2,7 +2,6 @@ package eu.dnetlib.dhp.schema.oaf; import java.io.Serializable; import java.util.List; -import java.util.Objects; public class Project extends OafEntity implements Serializable { @@ -352,70 +351,4 @@ public class Project extends OafEntity implements Serializable { : fundedamount; mergeOAFDataInfo(e); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Project project = (Project) o; - return Objects.equals(websiteurl, project.websiteurl) - && Objects.equals(code, project.code) - && Objects.equals(acronym, project.acronym) - && Objects.equals(title, project.title) - && Objects.equals(startdate, project.startdate) - && Objects.equals(enddate, project.enddate) - && Objects.equals(callidentifier, project.callidentifier) - && Objects.equals(keywords, project.keywords) - && Objects.equals(duration, project.duration) - && Objects.equals(ecsc39, project.ecsc39) - && Objects.equals(oamandatepublications, project.oamandatepublications) - && Objects.equals(ecarticle29_3, project.ecarticle29_3) - && Objects.equals(subjects, project.subjects) - && Objects.equals(fundingtree, project.fundingtree) - && Objects.equals(contracttype, project.contracttype) - && Objects.equals(optional1, project.optional1) - && Objects.equals(optional2, project.optional2) - && Objects.equals(jsonextrainfo, project.jsonextrainfo) - && Objects.equals(contactfullname, project.contactfullname) - && Objects.equals(contactfax, project.contactfax) - && Objects.equals(contactphone, project.contactphone) - && Objects.equals(contactemail, project.contactemail) - && Objects.equals(summary, project.summary) - && Objects.equals(currency, project.currency) - && Objects.equals(totalcost, project.totalcost) - && Objects.equals(fundedamount, project.fundedamount); - } - - @Override - public int hashCode() { - return Objects.hash( - super.hashCode(), - websiteurl, - code, - acronym, - title, - startdate, - enddate, - callidentifier, - keywords, - duration, - ecsc39, - oamandatepublications, - ecarticle29_3, - subjects, - fundingtree, - contracttype, - optional1, - optional2, - jsonextrainfo, - contactfullname, - contactfax, - contactphone, - contactemail, - summary, - currency, - totalcost, - fundedamount); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java index df2ecfa1b..62727a50f 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Publication.java @@ -2,7 +2,6 @@ package eu.dnetlib.dhp.schema.oaf; import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; -import java.util.Objects; public class Publication extends Result implements Serializable { @@ -34,18 +33,4 @@ public class Publication extends Result implements Serializable { if (p.getJournal() != null && compareTrust(this, e) < 0) journal = p.getJournal(); mergeOAFDataInfo(e); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Publication that = (Publication) o; - return Objects.equals(journal, that.journal); - } - - @Override - public int hashCode() { - return Objects.hash(super.hashCode(), journal); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java index f18a9fa0c..73192b894 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Result.java @@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf; import java.io.Serializable; import java.util.Comparator; import java.util.List; -import java.util.Objects; public class Result extends OafEntity implements Serializable { @@ -289,60 +288,4 @@ public class Result extends OafEntity implements Serializable { } return a.size() > b.size() ? a : b; } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Result result = (Result) o; - return Objects.equals(author, result.author) - && Objects.equals(resulttype, result.resulttype) - && Objects.equals(language, result.language) - && Objects.equals(country, result.country) - && Objects.equals(subject, result.subject) - && Objects.equals(title, result.title) - && Objects.equals(relevantdate, result.relevantdate) - && Objects.equals(description, result.description) - && Objects.equals(dateofacceptance, result.dateofacceptance) - && Objects.equals(publisher, result.publisher) - && Objects.equals(embargoenddate, result.embargoenddate) - && Objects.equals(source, result.source) - && Objects.equals(fulltext, result.fulltext) - && Objects.equals(format, result.format) - && Objects.equals(contributor, result.contributor) - && Objects.equals(resourcetype, result.resourcetype) - && Objects.equals(coverage, result.coverage) - && Objects.equals(bestaccessright, result.bestaccessright) - && Objects.equals(context, result.context) - && Objects.equals(externalReference, result.externalReference) - && Objects.equals(instance, result.instance); - } - - @Override - public int hashCode() { - return Objects.hash( - super.hashCode(), - author, - resulttype, - language, - country, - subject, - title, - relevantdate, - description, - dateofacceptance, - publisher, - embargoenddate, - source, - fulltext, - format, - contributor, - resourcetype, - coverage, - bestaccessright, - context, - externalReference, - instance); - } } diff --git a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java index 801c1f2f1..59ef7d1c8 100644 --- a/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java +++ b/dhp-schemas/src/main/java/eu/dnetlib/dhp/schema/oaf/Software.java @@ -3,7 +3,6 @@ package eu.dnetlib.dhp.schema.oaf; import eu.dnetlib.dhp.schema.common.ModelConstants; import java.io.Serializable; import java.util.List; -import java.util.Objects; public class Software extends Result implements Serializable { @@ -76,26 +75,4 @@ public class Software extends Result implements Serializable { mergeOAFDataInfo(e); } - - @Override - public boolean equals(Object o) { - if (this == o) return true; - if (o == null || getClass() != o.getClass()) return false; - if (!super.equals(o)) return false; - Software software = (Software) o; - return Objects.equals(documentationUrl, software.documentationUrl) - && Objects.equals(license, software.license) - && Objects.equals(codeRepositoryUrl, software.codeRepositoryUrl) - && Objects.equals(programmingLanguage, software.programmingLanguage); - } - - @Override - public int hashCode() { - return Objects.hash( - super.hashCode(), - documentationUrl, - license, - codeRepositoryUrl, - programmingLanguage); - } } diff --git a/dhp-workflows/dhp-actionmanager/src/main/java/eu/dnetlib/dhp/actionmanager/promote/PromoteActionPayloadForGraphTableJob.java b/dhp-workflows/dhp-actionmanager/src/main/java/eu/dnetlib/dhp/actionmanager/promote/PromoteActionPayloadForGraphTableJob.java index 1fa173e9c..b60530707 100644 --- a/dhp-workflows/dhp-actionmanager/src/main/java/eu/dnetlib/dhp/actionmanager/promote/PromoteActionPayloadForGraphTableJob.java +++ b/dhp-workflows/dhp-actionmanager/src/main/java/eu/dnetlib/dhp/actionmanager/promote/PromoteActionPayloadForGraphTableJob.java @@ -166,10 +166,8 @@ public class PromoteActionPayloadForGraphTableJob { actionPayloadClazz.getSimpleName(), rowClazz.getSimpleName()); - SerializableSupplier> rowIdFn = - PromoteActionPayloadForGraphTableJob::idFn; - SerializableSupplier> actionPayloadIdFn = - PromoteActionPayloadForGraphTableJob::idFn; + SerializableSupplier> rowIdFn = ModelSupport::idFn; + SerializableSupplier> actionPayloadIdFn = ModelSupport::idFn; SerializableSupplier> mergeRowWithActionPayloadAndGetFn = MergeAndGet.functionFor(strategy); SerializableSupplier> mergeRowsAndGetFn = @@ -192,68 +190,6 @@ public class PromoteActionPayloadForGraphTableJob { joinedAndMerged, rowIdFn, mergeRowsAndGetFn, zeroFn, isNotZeroFn, rowClazz); } - private static Function idFn() { - return x -> { - if (isSubClass(x, Relation.class)) { - return idFnForRelation(x); - } - return idFnForOafEntity(x); - }; - } - - private static String idFnForRelation(T t) { - Relation r = (Relation) t; - return Optional.ofNullable(r.getSource()) - .map( - source -> - Optional.ofNullable(r.getTarget()) - .map( - target -> - Optional.ofNullable(r.getRelType()) - .map( - relType -> - Optional.ofNullable( - r - .getSubRelType()) - .map( - subRelType -> - Optional - .ofNullable( - r - .getRelClass()) - .map( - relClass -> - String - .join( - source, - target, - relType, - subRelType, - relClass)) - .orElse( - String - .join( - source, - target, - relType, - subRelType))) - .orElse( - String - .join( - source, - target, - relType))) - .orElse( - String.join( - source, target))) - .orElse(source)) - .orElse(null); - } - - private static String idFnForOafEntity(T t) { - return ((OafEntity) t).getId(); - } - private static SerializableSupplier zeroFn(Class clazz) { switch (clazz.getCanonicalName()) { case "eu.dnetlib.dhp.schema.oaf.Dataset": diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/GenerateEntitiesApplication.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/GenerateEntitiesApplication.java index 34ae2df9b..97a94bc40 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/GenerateEntitiesApplication.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/GenerateEntitiesApplication.java @@ -6,6 +6,7 @@ import com.fasterxml.jackson.databind.ObjectMapper; import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.common.HdfsSupport; import eu.dnetlib.dhp.oa.graph.raw.common.DbClient; +import eu.dnetlib.dhp.schema.common.ModelSupport; import eu.dnetlib.dhp.schema.oaf.*; import java.io.IOException; import java.sql.SQLException; @@ -29,6 +30,8 @@ public class GenerateEntitiesApplication { private static final Logger log = LoggerFactory.getLogger(GenerateEntitiesApplication.class); + private static final ObjectMapper OBJECT_MAPPER = new ObjectMapper(); + public static void main(final String[] args) throws Exception { final ArgumentApplicationParser parser = new ArgumentApplicationParser( @@ -78,7 +81,7 @@ public class GenerateEntitiesApplication { log.info("Generate entities from files:"); existingSourcePaths.forEach(log::info); - JavaRDD inputRdd = sc.emptyRDD(); + JavaRDD inputRdd = sc.emptyRDD(); for (final String sp : existingSourcePaths) { inputRdd = @@ -86,15 +89,29 @@ public class GenerateEntitiesApplication { sc.sequenceFile(sp, Text.class, Text.class) .map(k -> new Tuple2<>(k._1().toString(), k._2().toString())) .map(k -> convertToListOaf(k._1(), k._2(), code2name)) - .flatMap(list -> list.iterator()) - .map( - oaf -> - oaf.getClass().getSimpleName().toLowerCase() - + "|" - + convertToJson(oaf))); + .flatMap(list -> list.iterator())); } - inputRdd.saveAsTextFile(targetPath, GzipCodec.class); + inputRdd.mapToPair(oaf -> new Tuple2<>(ModelSupport.idFn().apply(oaf), oaf)) + .reduceByKey((o1, o2) -> merge(o1, o2)) + .map(Tuple2::_2) + .map( + oaf -> + oaf.getClass().getSimpleName().toLowerCase() + + "|" + + OBJECT_MAPPER.writeValueAsString(oaf)) + .saveAsTextFile(targetPath, GzipCodec.class); + } + + private static Oaf merge(Oaf o1, Oaf o2) { + if (ModelSupport.isSubClass(o1, OafEntity.class)) { + ((OafEntity) o1).mergeFrom((OafEntity) o2); + } else if (ModelSupport.isSubClass(o1, Relation.class)) { + ((Relation) o1).mergeFrom((Relation) o2); + } else { + throw new RuntimeException("invalid Oaf type:" + o1.getClass().getCanonicalName()); + } + return o1; } private static List convertToListOaf( @@ -120,9 +137,10 @@ public class GenerateEntitiesApplication { return Arrays.asList(convertFromJson(s, Dataset.class)); case "software": return Arrays.asList(convertFromJson(s, Software.class)); - case "otherresearchproducts": - default: + case "otherresearchproduct": return Arrays.asList(convertFromJson(s, OtherResearchProduct.class)); + default: + throw new RuntimeException("type not managed: " + type.toLowerCase()); } } @@ -150,17 +168,9 @@ public class GenerateEntitiesApplication { return map; } - private static String convertToJson(final Oaf oaf) { - try { - return new ObjectMapper().writeValueAsString(oaf); - } catch (final Exception e) { - throw new RuntimeException(e); - } - } - private static Oaf convertFromJson(final String s, final Class clazz) { try { - return new ObjectMapper().readValue(s, clazz); + return OBJECT_MAPPER.readValue(s, clazz); } catch (final Exception e) { log.error("Error parsing object of class: " + clazz); log.error(s); diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MergeClaimsApplication.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MergeClaimsApplication.java index 130b826e9..f10991bca 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MergeClaimsApplication.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MergeClaimsApplication.java @@ -1,7 +1,6 @@ package eu.dnetlib.dhp.oa.graph.raw; import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkSession; -import static eu.dnetlib.dhp.schema.common.ModelSupport.isSubClass; import com.fasterxml.jackson.databind.ObjectMapper; import eu.dnetlib.dhp.application.ArgumentApplicationParser; @@ -10,7 +9,6 @@ import eu.dnetlib.dhp.schema.common.ModelSupport; import eu.dnetlib.dhp.schema.oaf.*; import java.util.Objects; import java.util.Optional; -import java.util.function.Function; import org.apache.commons.io.IOUtils; import org.apache.spark.SparkConf; import org.apache.spark.api.java.JavaSparkContext; @@ -83,7 +81,9 @@ public class MergeClaimsApplication { readFromPath(spark, rawPath, clazz) .map( (MapFunction>) - value -> new Tuple2<>(idFn().apply(value), value), + value -> + new Tuple2<>( + ModelSupport.idFn().apply(value), value), Encoders.tuple(Encoders.STRING(), Encoders.kryo(clazz))); final JavaSparkContext jsc = JavaSparkContext.fromSparkContext(spark.sparkContext()); @@ -92,14 +92,11 @@ public class MergeClaimsApplication { .getValue() .map( (MapFunction>) - value -> new Tuple2<>(idFn().apply(value), value), + value -> + new Tuple2<>( + ModelSupport.idFn().apply(value), value), Encoders.tuple(Encoders.STRING(), Encoders.kryo(clazz))); - /* - Dataset> claim = readFromPath(spark, claimPath, clazz) - .map((MapFunction>) value -> new Tuple2<>(idFn().apply(value), value), Encoders.tuple(Encoders.STRING(), Encoders.kryo(clazz))); - */ - raw.joinWith(claim, raw.col("_1").equalTo(claim.col("_1")), "full_outer") .map( (MapFunction, Tuple2>, T>) @@ -131,78 +128,12 @@ public class MergeClaimsApplication { .map( (MapFunction) value -> OBJECT_MAPPER.readValue(value, clazz), Encoders.bean(clazz)) - .filter((FilterFunction) value -> Objects.nonNull(idFn().apply(value))); - /* - return spark.read() - .load(path) - .as(Encoders.bean(clazz)) - .filter((FilterFunction) value -> Objects.nonNull(idFn().apply(value))); - */ + .filter( + (FilterFunction) + value -> Objects.nonNull(ModelSupport.idFn().apply(value))); } private static void removeOutputDir(SparkSession spark, String path) { HdfsSupport.remove(path, spark.sparkContext().hadoopConfiguration()); } - - private static Function idFn() { - return x -> { - if (isSubClass(x, Relation.class)) { - return idFnForRelation(x); - } - return idFnForOafEntity(x); - }; - } - - private static String idFnForRelation(T t) { - Relation r = (Relation) t; - return Optional.ofNullable(r.getSource()) - .map( - source -> - Optional.ofNullable(r.getTarget()) - .map( - target -> - Optional.ofNullable(r.getRelType()) - .map( - relType -> - Optional.ofNullable( - r - .getSubRelType()) - .map( - subRelType -> - Optional - .ofNullable( - r - .getRelClass()) - .map( - relClass -> - String - .join( - source, - target, - relType, - subRelType, - relClass)) - .orElse( - String - .join( - source, - target, - relType, - subRelType))) - .orElse( - String - .join( - source, - target, - relType))) - .orElse( - String.join( - source, target))) - .orElse(source)) - .orElse(null); - } - - private static String idFnForOafEntity(T t) { - return ((OafEntity) t).getId(); - } } From fad94c2155e780a97b1503d12e5c92bfaa625aec Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Fri, 24 Apr 2020 16:47:10 +0200 Subject: [PATCH 17/17] updated dependency dnet-pace-core to version 4.0.1 to include https://code-repo.d4science.org/D-Net/dnet-dedup/commit/7bc00a3f5f88c7e95075b20b122dcc1f7bc17d4d --- pom.xml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pom.xml b/pom.xml index 25e84a424..9513b2136 100644 --- a/pom.xml +++ b/pom.xml @@ -313,7 +313,7 @@ eu.dnetlib dnet-pace-core - 4.0.0 + 4.0.1 eu.dnetlib