From 026f297e4924acb6f6a7c77b9d4ce6363f303853 Mon Sep 17 00:00:00 2001
From: "miriam.baglioni" <miriam.baglioni@isti.cnr.it>
Date: Thu, 30 Apr 2020 11:31:59 +0200
Subject: [PATCH] removed the writeUpdate oprion

---
 ...rkResultToOrganizationFromIstRepoJob2.java | 54 -------------------
 1 file changed, 54 deletions(-)

diff --git a/dhp-workflows/dhp-propagation/src/main/java/eu/dnetlib/dhp/resulttoorganizationfrominstrepo/SparkResultToOrganizationFromIstRepoJob2.java b/dhp-workflows/dhp-propagation/src/main/java/eu/dnetlib/dhp/resulttoorganizationfrominstrepo/SparkResultToOrganizationFromIstRepoJob2.java
index 6bdfa36dd1..8c9f270e67 100644
--- a/dhp-workflows/dhp-propagation/src/main/java/eu/dnetlib/dhp/resulttoorganizationfrominstrepo/SparkResultToOrganizationFromIstRepoJob2.java
+++ b/dhp-workflows/dhp-propagation/src/main/java/eu/dnetlib/dhp/resulttoorganizationfrominstrepo/SparkResultToOrganizationFromIstRepoJob2.java
@@ -61,12 +61,6 @@ public class SparkResultToOrganizationFromIstRepoJob2 {
 		final String resultType = resultClassName.substring(resultClassName.lastIndexOf(".") + 1).toLowerCase();
 		log.info("resultType: {}", resultType);
 
-		final Boolean writeUpdates = Optional
-			.ofNullable(parser.get("writeUpdate"))
-			.map(Boolean::valueOf)
-			.orElse(Boolean.TRUE);
-		log.info("writeUpdate: {}", writeUpdates);
-
 		final Boolean saveGraph = Optional
 			.ofNullable(parser.get("saveGraph"))
 			.map(Boolean::valueOf)
@@ -93,7 +87,6 @@ public class SparkResultToOrganizationFromIstRepoJob2 {
 					outputPath,
 					resultClazz,
 					resultType,
-					writeUpdates,
 					saveGraph);
 			});
 	}
@@ -106,7 +99,6 @@ public class SparkResultToOrganizationFromIstRepoJob2 {
 		String outputPath,
 		Class<? extends Result> resultClazz,
 		String resultType,
-		Boolean writeUpdates,
 		Boolean saveGraph) {
 		final JavaSparkContext sc = new JavaSparkContext(spark.sparkContext());
 
@@ -124,10 +116,6 @@ public class SparkResultToOrganizationFromIstRepoJob2 {
 			broadcast_datasourceorganizationassoc)
 				.as(Encoders.bean(ResultOrganizationSet.class));
 
-		if (writeUpdates) {
-			createUpdateForRelationWrite(potentialUpdates, outputPath + "/" + resultType);
-		}
-
 		if (saveGraph) {
 			getNewRelations(
 				spark
@@ -229,48 +217,6 @@ public class SparkResultToOrganizationFromIstRepoJob2 {
 				Encoders.bean(DatasourceOrganization.class));
 	}
 
-	private static void createUpdateForRelationWrite(
-		Dataset<ResultOrganizationSet> toupdaterelation, String outputPath) {
-		toupdaterelation
-			.flatMap(
-				s -> {
-					List<Relation> relationList = new ArrayList<>();
-					List<String> orgs = s.getOrganizationSet();
-					String resId = s.getResultId();
-					for (String org : orgs) {
-						relationList
-							.add(
-								getRelation(
-									org,
-									resId,
-									RELATION_ORGANIZATION_RESULT_REL_CLASS,
-									RELATION_RESULTORGANIZATION_REL_TYPE,
-									RELATION_RESULTORGANIZATION_SUBREL_TYPE,
-									PROPAGATION_DATA_INFO_TYPE,
-									PROPAGATION_RELATION_RESULT_ORGANIZATION_INST_REPO_CLASS_ID,
-									PROPAGATION_RELATION_RESULT_ORGANIZATION_INST_REPO_CLASS_NAME));
-						relationList
-							.add(
-								getRelation(
-									resId,
-									org,
-									RELATION_RESULT_ORGANIZATION_REL_CLASS,
-									RELATION_RESULTORGANIZATION_REL_TYPE,
-									RELATION_RESULTORGANIZATION_SUBREL_TYPE,
-									PROPAGATION_DATA_INFO_TYPE,
-									PROPAGATION_RELATION_RESULT_ORGANIZATION_INST_REPO_CLASS_ID,
-									PROPAGATION_RELATION_RESULT_ORGANIZATION_INST_REPO_CLASS_NAME));
-					}
-					return relationList.iterator();
-				},
-				Encoders.bean(Relation.class))
-			.toJSON()
-			.write()
-			.mode(SaveMode.Overwrite)
-			.option("compression", "gzip")
-			.text(outputPath);
-	}
-
 	private static org.apache.spark.sql.Dataset<ResultOrganizationSet> organizationPropagationAssoc(
 		SparkSession spark,
 		Broadcast<org.apache.spark.sql.Dataset<DatasourceOrganization>> broadcast_datasourceorganizationassoc) {