From 722a9aa0cfdc6d53a28f7048fbcc8c28a0a7c65c Mon Sep 17 00:00:00 2001
From: Andrea Mannocci <andremann@libero.it>
Date: Fri, 8 Oct 2021 14:28:56 +0200
Subject: [PATCH] rewiring subject and geo analysis

---
 notebooks/02-subjects&geographic.ipynb | 1137 +++++++++++++-----------
 1 file changed, 627 insertions(+), 510 deletions(-)

diff --git a/notebooks/02-subjects&geographic.ipynb b/notebooks/02-subjects&geographic.ipynb
index 29e818e..41a6739 100644
--- a/notebooks/02-subjects&geographic.ipynb
+++ b/notebooks/02-subjects&geographic.ipynb
@@ -10596,7 +10596,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 21,
+   "execution_count": 69,
    "metadata": {},
    "outputs": [
     {
@@ -10620,25 +10620,25 @@
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
-       "      <th>re3data_id</th>\n",
+       "      <th>orgIdentifier</th>\n",
        "      <th>institution</th>\n",
-       "      <th>org_name</th>\n",
-       "      <th>org_other_names</th>\n",
-       "      <th>org_country</th>\n",
-       "      <th>org_3</th>\n",
-       "      <th>org_noprofit</th>\n",
-       "      <th>org_url</th>\n",
-       "      <th>org_ids</th>\n",
-       "      <th>org_date1</th>\n",
-       "      <th>org_date2</th>\n",
-       "      <th>org_contact</th>\n",
+       "      <th>institutionName</th>\n",
+       "      <th>institutionAdditionalName</th>\n",
+       "      <th>institutionCountry</th>\n",
+       "      <th>responsabilityType</th>\n",
+       "      <th>institutionType</th>\n",
+       "      <th>institutionURL</th>\n",
+       "      <th>institutionIdentifier</th>\n",
+       "      <th>responsibilityStartDate</th>\n",
+       "      <th>responsibilityEndDate</th>\n",
+       "      <th>institutionContact</th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
        "      <th>0</th>\n",
        "      <td>r3d100000001</td>\n",
-       "      <td>[Odum Institute for Research in Social Science...</td>\n",
+       "      <td>{'institutionName': 'Odum Institute for Resear...</td>\n",
        "      <td>Odum Institute for Research in Social Science</td>\n",
        "      <td>[]</td>\n",
        "      <td>USA</td>\n",
@@ -10653,7 +10653,7 @@
        "    <tr>\n",
        "      <th>1</th>\n",
        "      <td>r3d100000002</td>\n",
-       "      <td>[The U.S. National Archives and Records Admini...</td>\n",
+       "      <td>{'institutionName': 'The U.S. National Archive...</td>\n",
        "      <td>The U.S. National Archives and Records Adminis...</td>\n",
        "      <td>[NARA, National Archives]</td>\n",
        "      <td>USA</td>\n",
@@ -10668,7 +10668,7 @@
        "    <tr>\n",
        "      <th>2</th>\n",
        "      <td>r3d100000002</td>\n",
-       "      <td>[The USA.gov, [], USA, [general], non-profit, ...</td>\n",
+       "      <td>{'institutionName': 'The USA.gov', 'institutio...</td>\n",
        "      <td>The USA.gov</td>\n",
        "      <td>[]</td>\n",
        "      <td>USA</td>\n",
@@ -10683,7 +10683,7 @@
        "    <tr>\n",
        "      <th>3</th>\n",
        "      <td>r3d100000004</td>\n",
-       "      <td>[Institut für Deutsche Sprache, Archiv für Ges...</td>\n",
+       "      <td>{'institutionName': 'Institut für Deutsche Spr...</td>\n",
        "      <td>Institut für Deutsche Sprache, Archiv für Gesp...</td>\n",
        "      <td>[AGD]</td>\n",
        "      <td>DEU</td>\n",
@@ -10698,7 +10698,7 @@
        "    <tr>\n",
        "      <th>4</th>\n",
        "      <td>r3d100000005</td>\n",
-       "      <td>[Odum Institute for Research in Social Science...</td>\n",
+       "      <td>{'institutionName': 'Odum Institute for Resear...</td>\n",
        "      <td>Odum Institute for Research in Social Science</td>\n",
        "      <td>[]</td>\n",
        "      <td>USA</td>\n",
@@ -10715,35 +10715,42 @@
        "</div>"
       ],
       "text/plain": [
-       "     re3data_id                                        institution  \\\n",
-       "0  r3d100000001  [Odum Institute for Research in Social Science...   \n",
-       "1  r3d100000002  [The U.S. National Archives and Records Admini...   \n",
-       "2  r3d100000002  [The USA.gov, [], USA, [general], non-profit, ...   \n",
-       "3  r3d100000004  [Institut für Deutsche Sprache, Archiv für Ges...   \n",
-       "4  r3d100000005  [Odum Institute for Research in Social Science...   \n",
-       "\n",
-       "                                            org_name  \\\n",
+       "  orgIdentifier                                        institution  \\\n",
+       "0  r3d100000001  {'institutionName': 'Odum Institute for Resear...   \n",
+       "1  r3d100000002  {'institutionName': 'The U.S. National Archive...   \n",
+       "2  r3d100000002  {'institutionName': 'The USA.gov', 'institutio...   \n",
+       "3  r3d100000004  {'institutionName': 'Institut für Deutsche Spr...   \n",
+       "4  r3d100000005  {'institutionName': 'Odum Institute for Resear...   \n",
+       "\n",
+       "                                     institutionName  \\\n",
        "0      Odum Institute for Research in Social Science   \n",
        "1  The U.S. National Archives and Records Adminis...   \n",
        "2                                        The USA.gov   \n",
        "3  Institut für Deutsche Sprache, Archiv für Gesp...   \n",
        "4      Odum Institute for Research in Social Science   \n",
        "\n",
-       "             org_other_names org_country               org_3 org_noprofit  \\\n",
-       "0                         []         USA           [general]   non-profit   \n",
-       "1  [NARA, National Archives]         USA           [general]   non-profit   \n",
-       "2                         []         USA           [general]   non-profit   \n",
-       "3                      [AGD]         DEU  [funding, general]   non-profit   \n",
-       "4                         []         USA         [technical]   non-profit   \n",
-       "\n",
-       "                                  org_url org_ids org_date1 org_date2  \\\n",
-       "0           https://odum.unc.edu/archive/      []                       \n",
-       "1                http://www.archives.gov/      []                       \n",
-       "2                     http://www.usa.gov/      []                       \n",
-       "3  http://agd.ids-mannheim.de/index.shtml      []      2004             \n",
-       "4                   https://odum.unc.edu/      []                       \n",
-       "\n",
-       "                                         org_contact  \n",
+       "   institutionAdditionalName institutionCountry  responsabilityType  \\\n",
+       "0                         []                USA           [general]   \n",
+       "1  [NARA, National Archives]                USA           [general]   \n",
+       "2                         []                USA           [general]   \n",
+       "3                      [AGD]                DEU  [funding, general]   \n",
+       "4                         []                USA         [technical]   \n",
+       "\n",
+       "  institutionType                          institutionURL  \\\n",
+       "0      non-profit           https://odum.unc.edu/archive/   \n",
+       "1      non-profit                http://www.archives.gov/   \n",
+       "2      non-profit                     http://www.usa.gov/   \n",
+       "3      non-profit  http://agd.ids-mannheim.de/index.shtml   \n",
+       "4      non-profit                   https://odum.unc.edu/   \n",
+       "\n",
+       "  institutionIdentifier responsibilityStartDate responsibilityEndDate  \\\n",
+       "0                    []                                                 \n",
+       "1                    []                                                 \n",
+       "2                    []                                                 \n",
+       "3                    []                    2004                         \n",
+       "4                    []                                                 \n",
+       "\n",
+       "                                  institutionContact  \n",
        "0                                                 []  \n",
        "1                 [http://www.archives.gov/contact/]  \n",
        "2                 [http://www.usa.gov/Contact.shtml]  \n",
@@ -10751,33 +10758,30 @@
        "4  [https://odum.unc.edu/contact/contact-form/, o...  "
       ]
      },
-     "execution_count": 21,
+     "execution_count": 69,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "re3data_institutions = re3data_df.explode('institution')[['re3data_id', 'institution']]\n",
+    "re3data_institutions = re3data_df.explode('institution')[['orgIdentifier', 'institution']]\n",
     "re3data_institutions = re3data_institutions[~re3data_institutions.institution.isna()].reset_index(drop=True)\n",
-    "re3data_institutions = re3data_institutions.join(pd.DataFrame(re3data_institutions.institution.to_list(), columns=['org_name', 'org_other_names', \n",
-    "                                                                                              'org_country', 'org_3', 'org_noprofit', \n",
-    "                                                                                              'org_url', 'org_ids', 'org_date1', \n",
-    "                                                                                              'org_date2', 'org_contact']))\n",
+    "re3data_institutions = re3data_institutions.join(pd.json_normalize(re3data_institutions.institution))\n",
     "re3data_institutions.head()"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 22,
+   "execution_count": 70,
    "metadata": {},
    "outputs": [],
    "source": [
-    "re3data_institutions['org_continent'] = re3data_institutions.org_country.map(countrycode_to_continent)"
+    "re3data_institutions['org_continent'] = re3data_institutions.institutionCountry.map(countrycode_to_continent)"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 23,
+   "execution_count": 71,
    "metadata": {},
    "outputs": [
     {
@@ -10786,13 +10790,13 @@
        "array(['AAA', 'EEC'], dtype=object)"
       ]
      },
-     "execution_count": 23,
+     "execution_count": 71,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "re3data_institutions[re3data_institutions.org_continent.isna()].org_country.unique()"
+    "re3data_institutions[re3data_institutions.org_continent.isna()].institutionCountry.unique()"
    ]
   },
   {
@@ -10805,11 +10809,11 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 24,
+   "execution_count": 72,
    "metadata": {},
    "outputs": [],
    "source": [
-    "re3data_institutions.loc[re3data_institutions.org_country == 'EEC', 'org_continent'] = 'EU'"
+    "re3data_institutions.loc[re3data_institutions.institutionCountry == 'EEC', 'org_continent'] = 'EU'"
    ]
   },
   {
@@ -10821,7 +10825,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 25,
+   "execution_count": 77,
    "metadata": {},
    "outputs": [
     {
@@ -10845,159 +10849,138 @@
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
-       "      <th>opendoar_id</th>\n",
-       "      <th>institution</th>\n",
-       "      <th>org_name</th>\n",
-       "      <th>org_other_names</th>\n",
-       "      <th>org_country</th>\n",
-       "      <th>org_3</th>\n",
-       "      <th>org_noprofit</th>\n",
-       "      <th>org_url</th>\n",
-       "      <th>org_ids</th>\n",
-       "      <th>org_date1</th>\n",
-       "      <th>org_date2</th>\n",
-       "      <th>org_contact</th>\n",
+       "      <th>system_metadata.id</th>\n",
+       "      <th>organization</th>\n",
+       "      <th>name</th>\n",
+       "      <th>alternativeName</th>\n",
+       "      <th>country</th>\n",
+       "      <th>url</th>\n",
+       "      <th>identifier</th>\n",
+       "      <th>location.latitude</th>\n",
+       "      <th>location.longiture</th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
        "      <th>0</th>\n",
-       "      <td>101</td>\n",
-       "      <td>[university of utrecht, [universiteit utrecht]...</td>\n",
-       "      <td>university of utrecht</td>\n",
-       "      <td>[universiteit utrecht]</td>\n",
-       "      <td>NLD</td>\n",
-       "      <td>[]</td>\n",
-       "      <td></td>\n",
-       "      <td>https://www.uu.nl</td>\n",
-       "      <td>[https://ror.org/04pp8hn57]</td>\n",
-       "      <td></td>\n",
-       "      <td></td>\n",
-       "      <td>[]</td>\n",
+       "      <td>175</td>\n",
+       "      <td>{'name': 'university of hong kong', 'alternati...</td>\n",
+       "      <td>university of hong kong</td>\n",
+       "      <td>hku</td>\n",
+       "      <td>CHN</td>\n",
+       "      <td>http://www.hku.hk</td>\n",
+       "      <td>[{'identifier': 'https://ror.org/02zhqgq86', '...</td>\n",
+       "      <td>22.2824</td>\n",
+       "      <td>114.138</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>1</th>\n",
-       "      <td>115</td>\n",
-       "      <td>[indian institute of management kozhikode, [ii...</td>\n",
-       "      <td>indian institute of management kozhikode</td>\n",
-       "      <td>[iimk]</td>\n",
-       "      <td>IND</td>\n",
-       "      <td>[]</td>\n",
-       "      <td></td>\n",
-       "      <td>http://www.iimk.ac.in/</td>\n",
-       "      <td>[https://ror.org/03m1xdc36]</td>\n",
-       "      <td></td>\n",
-       "      <td></td>\n",
-       "      <td>[]</td>\n",
+       "      <td>64</td>\n",
+       "      <td>{'name': 'central european university', 'alter...</td>\n",
+       "      <td>central european university</td>\n",
+       "      <td>ceu</td>\n",
+       "      <td>HUN</td>\n",
+       "      <td>https://www.ceu.edu</td>\n",
+       "      <td>[{'identifier': 'https://ror.org/02zx40v98', '...</td>\n",
+       "      <td>47.5005</td>\n",
+       "      <td>19.0494</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>2</th>\n",
-       "      <td>41</td>\n",
-       "      <td>[california institute of technology, [caltech]...</td>\n",
-       "      <td>california institute of technology</td>\n",
-       "      <td>[caltech]</td>\n",
-       "      <td>USA</td>\n",
-       "      <td>[]</td>\n",
-       "      <td></td>\n",
-       "      <td>http://www.caltech.edu/</td>\n",
-       "      <td>[https://ror.org/05dxps055]</td>\n",
-       "      <td></td>\n",
-       "      <td></td>\n",
-       "      <td>[]</td>\n",
+       "      <td>151</td>\n",
+       "      <td>{'name': 'european university institute', 'alt...</td>\n",
+       "      <td>european university institute</td>\n",
+       "      <td>eui</td>\n",
+       "      <td>ITA</td>\n",
+       "      <td>http://www.eui.eu/</td>\n",
+       "      <td>[{'identifier': 'https://ror.org/0031wrj91', '...</td>\n",
+       "      <td>43.8017</td>\n",
+       "      <td>11.286</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>3</th>\n",
-       "      <td>119</td>\n",
-       "      <td>[dublin city university, [dcu], ie, [], , http...</td>\n",
-       "      <td>dublin city university</td>\n",
-       "      <td>[dcu]</td>\n",
-       "      <td>IRL</td>\n",
-       "      <td>[]</td>\n",
-       "      <td></td>\n",
-       "      <td>http://www.dcu.ie/</td>\n",
-       "      <td>[https://ror.org/04a1a1e81]</td>\n",
-       "      <td></td>\n",
-       "      <td></td>\n",
-       "      <td>[]</td>\n",
+       "      <td>105</td>\n",
+       "      <td>{'name': 'uhasselt', 'alternativeName': 'hasse...</td>\n",
+       "      <td>uhasselt</td>\n",
+       "      <td>hasselt university</td>\n",
+       "      <td>BEL</td>\n",
+       "      <td>https://www.uhasselt.be</td>\n",
+       "      <td>[{'identifier': 'https://ror.org/04nbhqj75', '...</td>\n",
+       "      <td>50.9253</td>\n",
+       "      <td>5.39083</td>\n",
        "    </tr>\n",
        "    <tr>\n",
        "      <th>4</th>\n",
-       "      <td>129</td>\n",
-       "      <td>[istituto nazionale di geofisica e vulcanologi...</td>\n",
-       "      <td>istituto nazionale di geofisica e vulcanologia</td>\n",
-       "      <td>[ingv]</td>\n",
-       "      <td>ITA</td>\n",
-       "      <td>[]</td>\n",
-       "      <td></td>\n",
-       "      <td>http://www.ingv.it</td>\n",
-       "      <td>[https://ror.org/00qps9a02]</td>\n",
-       "      <td></td>\n",
+       "      <td>101</td>\n",
+       "      <td>{'name': 'university of utrecht', 'alternative...</td>\n",
+       "      <td>university of utrecht</td>\n",
        "      <td></td>\n",
-       "      <td>[]</td>\n",
+       "      <td>NLD</td>\n",
+       "      <td>https://www.uu.nl</td>\n",
+       "      <td>[{'identifier': 'https://ror.org/04pp8hn57', '...</td>\n",
+       "      <td>52.0902</td>\n",
+       "      <td>5.1223</td>\n",
        "    </tr>\n",
        "  </tbody>\n",
        "</table>\n",
        "</div>"
       ],
       "text/plain": [
-       "   opendoar_id                                        institution  \\\n",
-       "0          101  [university of utrecht, [universiteit utrecht]...   \n",
-       "1          115  [indian institute of management kozhikode, [ii...   \n",
-       "2           41  [california institute of technology, [caltech]...   \n",
-       "3          119  [dublin city university, [dcu], ie, [], , http...   \n",
-       "4          129  [istituto nazionale di geofisica e vulcanologi...   \n",
-       "\n",
-       "                                         org_name         org_other_names  \\\n",
-       "0                           university of utrecht  [universiteit utrecht]   \n",
-       "1        indian institute of management kozhikode                  [iimk]   \n",
-       "2              california institute of technology               [caltech]   \n",
-       "3                          dublin city university                   [dcu]   \n",
-       "4  istituto nazionale di geofisica e vulcanologia                  [ingv]   \n",
-       "\n",
-       "  org_country org_3 org_noprofit                  org_url  \\\n",
-       "0         NLD    []                     https://www.uu.nl   \n",
-       "1         IND    []                http://www.iimk.ac.in/   \n",
-       "2         USA    []               http://www.caltech.edu/   \n",
-       "3         IRL    []                    http://www.dcu.ie/   \n",
-       "4         ITA    []                    http://www.ingv.it   \n",
-       "\n",
-       "                       org_ids org_date1 org_date2 org_contact  \n",
-       "0  [https://ror.org/04pp8hn57]                              []  \n",
-       "1  [https://ror.org/03m1xdc36]                              []  \n",
-       "2  [https://ror.org/05dxps055]                              []  \n",
-       "3  [https://ror.org/04a1a1e81]                              []  \n",
-       "4  [https://ror.org/00qps9a02]                              []  "
+       "  system_metadata.id                                       organization  \\\n",
+       "0                175  {'name': 'university of hong kong', 'alternati...   \n",
+       "1                 64  {'name': 'central european university', 'alter...   \n",
+       "2                151  {'name': 'european university institute', 'alt...   \n",
+       "3                105  {'name': 'uhasselt', 'alternativeName': 'hasse...   \n",
+       "4                101  {'name': 'university of utrecht', 'alternative...   \n",
+       "\n",
+       "                            name     alternativeName country  \\\n",
+       "0        university of hong kong                 hku     CHN   \n",
+       "1    central european university                 ceu     HUN   \n",
+       "2  european university institute                 eui     ITA   \n",
+       "3                       uhasselt  hasselt university     BEL   \n",
+       "4          university of utrecht                         NLD   \n",
+       "\n",
+       "                       url                                         identifier  \\\n",
+       "0        http://www.hku.hk  [{'identifier': 'https://ror.org/02zhqgq86', '...   \n",
+       "1      https://www.ceu.edu  [{'identifier': 'https://ror.org/02zx40v98', '...   \n",
+       "2       http://www.eui.eu/  [{'identifier': 'https://ror.org/0031wrj91', '...   \n",
+       "3  https://www.uhasselt.be  [{'identifier': 'https://ror.org/04nbhqj75', '...   \n",
+       "4        https://www.uu.nl  [{'identifier': 'https://ror.org/04pp8hn57', '...   \n",
+       "\n",
+       "  location.latitude location.longiture  \n",
+       "0           22.2824            114.138  \n",
+       "1           47.5005            19.0494  \n",
+       "2           43.8017             11.286  \n",
+       "3           50.9253            5.39083  \n",
+       "4           52.0902             5.1223  "
       ]
      },
-     "execution_count": 25,
+     "execution_count": 77,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "opendoar_institutions = opendoar_df.explode('institution')[['opendoar_id', 'institution']]\n",
-    "opendoar_institutions = opendoar_institutions[~opendoar_institutions.institution.isna()].reset_index(drop=True)\n",
-    "opendoar_institutions = opendoar_institutions.join(pd.DataFrame(opendoar_institutions.institution.to_list(), columns=['org_name', 'org_other_names', \n",
-    "                                                                                              'org_country', 'org_3', 'org_noprofit', \n",
-    "                                                                                              'org_url', 'org_ids', 'org_date1', \n",
-    "                                                                                              'org_date2', 'org_contact']))\n",
-    "opendoar_institutions['org_country'] = opendoar_institutions.org_country.map(str.upper, na_action='ignore')\n",
-    "opendoar_institutions['org_country'] = opendoar_institutions.org_country.map(countrycode_iso2_to_countrycode_iso3, na_action='ignore')\n",
+    "opendoar_institutions = opendoar_df.explode('organization')[['system_metadata.id', 'organization']]\n",
+    "opendoar_institutions = opendoar_institutions[~opendoar_institutions.organization.isna()].reset_index(drop=True)\n",
+    "opendoar_institutions = opendoar_institutions.join(pd.json_normalize(opendoar_institutions.organization))\n",
+    "opendoar_institutions['country'] = opendoar_institutions.country.map(str.upper, na_action='ignore')\n",
+    "opendoar_institutions['country'] = opendoar_institutions.country.map(countrycode_iso2_to_countrycode_iso3, na_action='ignore')\n",
     "opendoar_institutions.head()"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 26,
+   "execution_count": 78,
    "metadata": {},
    "outputs": [],
    "source": [
-    "opendoar_institutions['org_continent'] = opendoar_institutions.org_country.map(countrycode_to_continent)"
+    "opendoar_institutions['org_continent'] = opendoar_institutions.country.map(countrycode_to_continent)"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 27,
+   "execution_count": 79,
    "metadata": {},
    "outputs": [
     {
@@ -11006,18 +10989,18 @@
        "array([nan, 'UMI'], dtype=object)"
       ]
      },
-     "execution_count": 27,
+     "execution_count": 79,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "opendoar_institutions[opendoar_institutions.org_continent.isna()].org_country.unique()"
+    "opendoar_institutions[opendoar_institutions.org_continent.isna()].country.unique()"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 28,
+   "execution_count": 80,
    "metadata": {},
    "outputs": [
     {
@@ -11041,36 +11024,30 @@
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
-       "      <th>opendoar_id</th>\n",
-       "      <th>institution</th>\n",
-       "      <th>org_name</th>\n",
-       "      <th>org_other_names</th>\n",
-       "      <th>org_country</th>\n",
-       "      <th>org_3</th>\n",
-       "      <th>org_noprofit</th>\n",
-       "      <th>org_url</th>\n",
-       "      <th>org_ids</th>\n",
-       "      <th>org_date1</th>\n",
-       "      <th>org_date2</th>\n",
-       "      <th>org_contact</th>\n",
+       "      <th>system_metadata.id</th>\n",
+       "      <th>organization</th>\n",
+       "      <th>name</th>\n",
+       "      <th>alternativeName</th>\n",
+       "      <th>country</th>\n",
+       "      <th>url</th>\n",
+       "      <th>identifier</th>\n",
+       "      <th>location.latitude</th>\n",
+       "      <th>location.longiture</th>\n",
        "      <th>org_continent</th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
-       "      <th>4349</th>\n",
+       "      <th>4357</th>\n",
        "      <td>5379</td>\n",
-       "      <td>[kettering university, [], um, [], , https://w...</td>\n",
+       "      <td>{'name': 'kettering university', 'alternativeN...</td>\n",
        "      <td>kettering university</td>\n",
-       "      <td>[]</td>\n",
-       "      <td>UMI</td>\n",
-       "      <td>[]</td>\n",
        "      <td></td>\n",
+       "      <td>UMI</td>\n",
        "      <td>https://www.kettering.edu</td>\n",
-       "      <td>[https://ror.org/03rcspa57]</td>\n",
-       "      <td></td>\n",
-       "      <td></td>\n",
-       "      <td>[]</td>\n",
+       "      <td>[{'identifier': 'https://ror.org/03rcspa57', '...</td>\n",
+       "      <td>43.0125</td>\n",
+       "      <td>83.7125</td>\n",
        "      <td>NA</td>\n",
        "    </tr>\n",
        "  </tbody>\n",
@@ -11078,27 +11055,27 @@
        "</div>"
       ],
       "text/plain": [
-       "      opendoar_id                                        institution  \\\n",
-       "4349         5379  [kettering university, [], um, [], , https://w...   \n",
+       "     system_metadata.id                                       organization  \\\n",
+       "4357               5379  {'name': 'kettering university', 'alternativeN...   \n",
        "\n",
-       "                  org_name org_other_names org_country org_3 org_noprofit  \\\n",
-       "4349  kettering university              []         UMI    []                \n",
+       "                      name alternativeName country                        url  \\\n",
+       "4357  kettering university                     UMI  https://www.kettering.edu   \n",
        "\n",
-       "                        org_url                      org_ids org_date1  \\\n",
-       "4349  https://www.kettering.edu  [https://ror.org/03rcspa57]             \n",
+       "                                             identifier location.latitude  \\\n",
+       "4357  [{'identifier': 'https://ror.org/03rcspa57', '...           43.0125   \n",
        "\n",
-       "     org_date2 org_contact org_continent  \n",
-       "4349                    []            NA  "
+       "     location.longiture org_continent  \n",
+       "4357            83.7125            NA  "
       ]
      },
-     "execution_count": 28,
+     "execution_count": 80,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "opendoar_institutions.loc[opendoar_institutions.org_country == 'UMI', 'org_continent'] = 'NA'\n",
-    "opendoar_institutions[opendoar_institutions.org_country == 'UMI']"
+    "opendoar_institutions.loc[opendoar_institutions.country == 'UMI', 'org_continent'] = 'NA'\n",
+    "opendoar_institutions[opendoar_institutions.country == 'UMI']"
    ]
   },
   {
@@ -11110,13 +11087,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 29,
+   "execution_count": 93,
    "metadata": {},
    "outputs": [],
    "source": [
-    "roar_df['location_country'] = roar_df.location_country.map(str.upper, na_action='ignore')\n",
-    "roar_df['location_country'] = roar_df.location_country.map(countrycode_iso2_to_countrycode_iso3)\n",
-    "roar_df['continent'] = roar_df.location_country.map(countrycode_to_continent)"
+    "roar_institutions = roar_df.explode('location_country')\n",
+    "roar_institutions['location_country'] = roar_institutions.location_country.map(str.upper, na_action='ignore')\n",
+    "roar_institutions['location_country'] = roar_institutions.location_country.map(countrycode_iso2_to_countrycode_iso3)\n",
+    "roar_institutions['continent'] = roar_institutions.location_country.map(countrycode_to_continent)"
    ]
   },
   {
@@ -11128,58 +11106,53 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 30,
+   "execution_count": 101,
    "metadata": {},
    "outputs": [],
    "source": [
-    "fairsharing_df['subjects'] = fairsharing_df.subjects.str.split(pat=',')\n",
-    "fairsharing_df['countries'] = fairsharing_df.countries.str.split(pat=',')\n",
-    "\n",
-    "fairsharing_countries = fairsharing_df.explode('countries')\n",
-    "fairsharing_countries['countrycode'] = fairsharing_countries.countries.map(country_to_countrycode)\n",
+    "fairsharing_countries = fairsharing_df.explode('attributes.countries')\n",
+    "fairsharing_countries['countrycode'] = fairsharing_countries['attributes.countries'].map(country_to_countrycode)\n",
     "fairsharing_countries['continent'] = fairsharing_countries.countrycode.map(countrycode_to_continent)"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 31,
+   "execution_count": 103,
    "metadata": {},
    "outputs": [
     {
      "data": {
       "text/plain": [
-       "array(['European Union', 'Republic of Ireland', 'Worldwide', nan],\n",
-       "      dtype=object)"
+       "array(['Worldwide', 'European Union', nan], dtype=object)"
       ]
      },
-     "execution_count": 31,
+     "execution_count": 103,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "fairsharing_countries[fairsharing_countries.countrycode.isna()].countries.unique()"
+    "fairsharing_countries[fairsharing_countries.countrycode.isna()]['attributes.countries'].unique()"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 32,
+   "execution_count": 105,
    "metadata": {},
    "outputs": [
     {
      "data": {
       "text/plain": [
-       "array(['European Union', 'Republic of Ireland', 'Worldwide', 'Antarctica',\n",
-       "       nan], dtype=object)"
+       "array(['Worldwide', 'European Union', nan, 'Antarctica'], dtype=object)"
       ]
      },
-     "execution_count": 32,
+     "execution_count": 105,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "fairsharing_countries[fairsharing_countries.continent.isna()].countries.unique()"
+    "fairsharing_countries[fairsharing_countries.continent.isna()]['attributes.countries'].unique()"
    ]
   },
   {
@@ -11191,12 +11164,12 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 33,
+   "execution_count": 106,
    "metadata": {},
    "outputs": [],
    "source": [
-    "fairsharing_countries.loc[fairsharing_countries.countries == 'Republic of Ireland', ['countries', 'countrycode', 'continent']] = ['Ireland', 'IE', 'EU']\n",
-    "fairsharing_countries.loc[fairsharing_countries.countries == 'European Union', ['countrycode', 'continent']] = ['EU', 'EU']"
+    "fairsharing_countries.loc[fairsharing_countries['attributes.countries'] == 'Republic of Ireland', ['attributes.countries', 'countrycode', 'continent']] = ['Ireland', 'IE', 'EU']\n",
+    "fairsharing_countries.loc[fairsharing_countries['attributes.countries'] == 'European Union', ['countrycode', 'continent']] = ['EU', 'EU']"
    ]
   },
   {
@@ -11208,7 +11181,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 34,
+   "execution_count": 107,
    "metadata": {},
    "outputs": [
     {
@@ -11232,25 +11205,87 @@
        "  <thead>\n",
        "    <tr style=\"text-align: right;\">\n",
        "      <th></th>\n",
-       "      <th>full_name</th>\n",
-       "      <th>short_name</th>\n",
-       "      <th>fs_url</th>\n",
-       "      <th>url</th>\n",
-       "      <th>countries</th>\n",
-       "      <th>subjects</th>\n",
+       "      <th>id</th>\n",
+       "      <th>type</th>\n",
+       "      <th>attributes.created-at</th>\n",
+       "      <th>attributes.updated-at</th>\n",
+       "      <th>attributes.metadata.doi</th>\n",
+       "      <th>attributes.metadata.name</th>\n",
+       "      <th>attributes.metadata.status</th>\n",
+       "      <th>attributes.metadata.contacts</th>\n",
+       "      <th>attributes.metadata.homepage</th>\n",
+       "      <th>attributes.metadata.identifier</th>\n",
+       "      <th>attributes.metadata.description</th>\n",
+       "      <th>attributes.metadata.support-links</th>\n",
+       "      <th>attributes.metadata.year-creation</th>\n",
+       "      <th>attributes.metadata.data-processes</th>\n",
+       "      <th>attributes.legacy-ids</th>\n",
+       "      <th>attributes.fairsharing-registry</th>\n",
+       "      <th>attributes.record-type</th>\n",
+       "      <th>attributes.subjects</th>\n",
+       "      <th>attributes.domains</th>\n",
+       "      <th>attributes.taxonomies</th>\n",
+       "      <th>attributes.user-defined-tags</th>\n",
+       "      <th>attributes.countries</th>\n",
+       "      <th>attributes.name</th>\n",
+       "      <th>attributes.abbreviation</th>\n",
+       "      <th>attributes.url</th>\n",
+       "      <th>attributes.doi</th>\n",
+       "      <th>attributes.fairsharing-licence</th>\n",
+       "      <th>attributes.description</th>\n",
+       "      <th>attributes.publications</th>\n",
+       "      <th>attributes.licence-links</th>\n",
+       "      <th>attributes.metadata.citations</th>\n",
+       "      <th>attributes.metadata.abbreviation</th>\n",
+       "      <th>attributes.metadata.access-points</th>\n",
+       "      <th>attributes.metadata.associated-tools</th>\n",
+       "      <th>attributes.metadata.deprecation-date</th>\n",
+       "      <th>attributes.metadata.deprecation-reason</th>\n",
+       "      <th>attributes.metadata.tombstone</th>\n",
        "      <th>countrycode</th>\n",
        "      <th>continent</th>\n",
        "    </tr>\n",
        "  </thead>\n",
        "  <tbody>\n",
        "    <tr>\n",
-       "      <th>915</th>\n",
-       "      <td>Antabif IPT - AntOBIS IPT - GBIF Belgium</td>\n",
+       "      <th>782</th>\n",
+       "      <td>2462</td>\n",
+       "      <td>fairsharing-records</td>\n",
+       "      <td>2017-06-27T13:30:19.000Z</td>\n",
+       "      <td>2021-09-30T11:35:28.523Z</td>\n",
+       "      <td>10.25504/FAIRsharing.ewyejx</td>\n",
        "      <td>Antabif IPT - AntOBIS IPT - GBIF Belgium</td>\n",
-       "      <td>https://fairsharing.org/10.25504/FAIRsharing.e...</td>\n",
+       "      <td>ready</td>\n",
+       "      <td>[{'contact-name': 'Anton Van de Putte', 'conta...</td>\n",
        "      <td>http://ipt.biodiversity.aq/</td>\n",
-       "      <td>Antarctica</td>\n",
+       "      <td>2462</td>\n",
+       "      <td>The Belgium Biodiversity Platform hosts this d...</td>\n",
+       "      <td>[{'url': 'a.heughebaert@biodiversity.be', 'nam...</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>[biodbcore-000944, bsg-d000944]</td>\n",
+       "      <td>Database</td>\n",
+       "      <td>repository</td>\n",
        "      <td>[Biodiversity, Life Science]</td>\n",
+       "      <td>[Taxonomic classification]</td>\n",
+       "      <td>[All]</td>\n",
+       "      <td>[]</td>\n",
+       "      <td>Antarctica</td>\n",
+       "      <td>FAIRsharing record for: Antabif IPT - AntOBIS ...</td>\n",
+       "      <td>None</td>\n",
+       "      <td>https://fairsharing.org/10.25504/FAIRsharing.e...</td>\n",
+       "      <td>10.25504/FAIRsharing.ewyejx</td>\n",
+       "      <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
+       "      <td>This FAIRsharing record describes: The Belgium...</td>\n",
+       "      <td>[]</td>\n",
+       "      <td>[{'licence-name': 'Apache License 2.0', 'licen...</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
+       "      <td>NaN</td>\n",
        "      <td>AQ</td>\n",
        "      <td>NaN</td>\n",
        "    </tr>\n",
@@ -11259,29 +11294,89 @@
        "</div>"
       ],
       "text/plain": [
-       "                                    full_name  \\\n",
-       "915  Antabif IPT - AntOBIS IPT - GBIF Belgium   \n",
+       "       id                 type     attributes.created-at  \\\n",
+       "782  2462  fairsharing-records  2017-06-27T13:30:19.000Z   \n",
+       "\n",
+       "        attributes.updated-at      attributes.metadata.doi  \\\n",
+       "782  2021-09-30T11:35:28.523Z  10.25504/FAIRsharing.ewyejx   \n",
+       "\n",
+       "                     attributes.metadata.name attributes.metadata.status  \\\n",
+       "782  Antabif IPT - AntOBIS IPT - GBIF Belgium                      ready   \n",
+       "\n",
+       "                          attributes.metadata.contacts  \\\n",
+       "782  [{'contact-name': 'Anton Van de Putte', 'conta...   \n",
+       "\n",
+       "    attributes.metadata.homepage  attributes.metadata.identifier  \\\n",
+       "782  http://ipt.biodiversity.aq/                            2462   \n",
+       "\n",
+       "                       attributes.metadata.description  \\\n",
+       "782  The Belgium Biodiversity Platform hosts this d...   \n",
+       "\n",
+       "                     attributes.metadata.support-links  \\\n",
+       "782  [{'url': 'a.heughebaert@biodiversity.be', 'nam...   \n",
+       "\n",
+       "     attributes.metadata.year-creation attributes.metadata.data-processes  \\\n",
+       "782                                NaN                                NaN   \n",
+       "\n",
+       "               attributes.legacy-ids attributes.fairsharing-registry  \\\n",
+       "782  [biodbcore-000944, bsg-d000944]                        Database   \n",
+       "\n",
+       "    attributes.record-type           attributes.subjects  \\\n",
+       "782             repository  [Biodiversity, Life Science]   \n",
+       "\n",
+       "             attributes.domains attributes.taxonomies  \\\n",
+       "782  [Taxonomic classification]                 [All]   \n",
+       "\n",
+       "    attributes.user-defined-tags attributes.countries  \\\n",
+       "782                           []           Antarctica   \n",
+       "\n",
+       "                                       attributes.name  \\\n",
+       "782  FAIRsharing record for: Antabif IPT - AntOBIS ...   \n",
+       "\n",
+       "    attributes.abbreviation  \\\n",
+       "782                    None   \n",
+       "\n",
+       "                                        attributes.url  \\\n",
+       "782  https://fairsharing.org/10.25504/FAIRsharing.e...   \n",
        "\n",
-       "                                   short_name  \\\n",
-       "915  Antabif IPT - AntOBIS IPT - GBIF Belgium   \n",
+       "                  attributes.doi  \\\n",
+       "782  10.25504/FAIRsharing.ewyejx   \n",
        "\n",
-       "                                                fs_url  \\\n",
-       "915  https://fairsharing.org/10.25504/FAIRsharing.e...   \n",
+       "                        attributes.fairsharing-licence  \\\n",
+       "782  https://creativecommons.org/licenses/by-sa/4.0...   \n",
        "\n",
-       "                             url   countries                      subjects  \\\n",
-       "915  http://ipt.biodiversity.aq/  Antarctica  [Biodiversity, Life Science]   \n",
+       "                                attributes.description  \\\n",
+       "782  This FAIRsharing record describes: The Belgium...   \n",
+       "\n",
+       "    attributes.publications  \\\n",
+       "782                      []   \n",
+       "\n",
+       "                              attributes.licence-links  \\\n",
+       "782  [{'licence-name': 'Apache License 2.0', 'licen...   \n",
+       "\n",
+       "    attributes.metadata.citations attributes.metadata.abbreviation  \\\n",
+       "782                           NaN                              NaN   \n",
+       "\n",
+       "    attributes.metadata.access-points attributes.metadata.associated-tools  \\\n",
+       "782                               NaN                                  NaN   \n",
+       "\n",
+       "    attributes.metadata.deprecation-date  \\\n",
+       "782                                  NaN   \n",
+       "\n",
+       "    attributes.metadata.deprecation-reason attributes.metadata.tombstone  \\\n",
+       "782                                    NaN                           NaN   \n",
        "\n",
        "    countrycode continent  \n",
-       "915          AQ       NaN  "
+       "782          AQ       NaN  "
       ]
      },
-     "execution_count": 34,
+     "execution_count": 107,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
-    "fairsharing_countries.loc[fairsharing_countries.countries == 'Antarctica', ['countrycode', 'continent']] = ['AQ', np.nan]\n",
+    "fairsharing_countries.loc[fairsharing_countries['attributes.countries'] == 'Antarctica', ['countrycode', 'continent']] = ['AQ', np.nan]\n",
     "fairsharing_countries[fairsharing_countries.countrycode == 'AQ']"
    ]
   },
@@ -11294,7 +11389,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 35,
+   "execution_count": 114,
    "metadata": {},
    "outputs": [
     {
@@ -11323,116 +11418,121 @@
           "IND",
           "CHN",
           "ITA",
-          "AUT",
           "NOR",
+          "AUT",
           "SWE",
           "BEL",
           "DNK",
-          "POL",
           "RUS",
+          "POL",
           "GRC",
           "ZAF",
+          "MEX",
           "CZE",
           "IRL",
-          "MEX",
-          "BRA",
           "TWN",
+          "NZL",
           "FIN",
+          "BRA",
           "PRT",
-          "NZL",
           "EST",
           "KOR",
           "COL",
+          "ISR",
           "SRB",
           "LTU",
           "ARG",
           "SGP",
           "HUN",
-          "ISR",
-          "TUR",
           "SVN",
+          "TUR",
           "ISL",
           "KEN",
-          "UKR",
+          "HKG",
+          "THA",
           "ROU",
-          "IDN",
-          "LUX",
           "SVK",
-          "HKG",
-          "PER",
-          "PAK",
+          "LUX",
+          "UKR",
+          "IDN",
           "LVA",
           "GRL",
-          "THA",
+          "PER",
           "CHL",
+          "HRV",
+          "CYP",
+          "PAK",
+          "SDN",
           "BEN",
           "PAN",
           "CMR",
-          "CYP",
-          "MKD",
-          "SDN",
-          "HRV",
           "BFA",
-          "TUN",
-          "CIV",
           "GHA",
-          "SEN",
-          "PYF",
-          "PHL",
-          "NCL",
+          "MKD",
           "NAM",
-          "LBN",
           "KAZ",
-          "FJI",
+          "LBN",
+          "CIV",
+          "LKA",
+          "TUN",
+          "MWI",
+          "PHL",
+          "BIH",
+          "EGY",
           "AZE",
-          "LKA"
+          "SEN",
+          "ETH",
+          "PYF",
+          "FJI",
+          "NCL"
          ],
          "y": [
-          2690,
-          1040,
-          573,
-          514,
+          2980,
+          1141,
+          603,
+          567,
+          405,
           349,
-          294,
-          233,
-          215,
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\"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"baxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"bgcolor\": \"#E5ECF6\", \"caxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}}, \"title\": {\"x\": 0.05}, \"xaxis\": {\"automargin\": true, \"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\", \"title\": {\"standoff\": 15}, \"zerolinecolor\": \"white\", \"zerolinewidth\": 2}, \"yaxis\": {\"automargin\": true, \"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\", \"title\": {\"standoff\": 15}, \"zerolinecolor\": \"white\", \"zerolinewidth\": 2}}}, \"title\": {\"text\": \"Country coverage\"}, \"xaxis\": {\"tickangle\": 45, \"tickfont\": {\"size\": 12}}},                        {\"responsive\": true}                    ).then(function(){\n",
        "                            \n",
-       "var gd = document.getElementById('3e2361db-b571-4e06-aad9-b7257a0b43f2');\n",
+       "var gd = document.getElementById('ad07183d-0842-426e-931e-80eeb87c9a4a');\n",
        "var x = new MutationObserver(function (mutations, observer) {{\n",
        "        var display = window.getComputedStyle(gd).display;\n",
        "        if (!display || display === 'none') {{\n",
@@ -13011,20 +13128,20 @@
     }
    ],
    "source": [
-    "data1 = re3data_institutions.groupby('org_country')[['re3data_id']].count().sort_values('re3data_id', ascending=False)\n",
-    "data2 = opendoar_institutions.groupby('org_country')[['opendoar_id']].count().sort_values('opendoar_id', ascending=False)\n",
-    "data3 = roar_df.groupby('location_country')[['eprintid']].count().sort_values('eprintid', ascending=False)\n",
-    "data4 = fairsharing_countries.groupby('countrycode')[['url']].count().sort_values('url', ascending=False)\n",
+    "data1 = re3data_institutions.groupby('institutionCountry')[['orgIdentifier']].count().sort_values('orgIdentifier', ascending=False)\n",
+    "data2 = opendoar_institutions.groupby('country')[['system_metadata.id']].count().sort_values('system_metadata.id', ascending=False)\n",
+    "data3 = roar_institutions.groupby('location_country')[['eprintid']].count().sort_values('eprintid', ascending=False)\n",
+    "data4 = fairsharing_countries.groupby('countrycode')[['id']].count().sort_values('id', ascending=False)\n",
     "\n",
     "plot = [\n",
     "    go.Bar(\n",
     "        x=data1.index,\n",
-    "        y=data1['re3data_id'],\n",
+    "        y=data1['orgIdentifier'],\n",
     "        name='re3data'\n",
     "    ),\n",
     "    go.Bar(\n",
     "        x=data2.index,\n",
-    "        y=data2['opendoar_id'],\n",
+    "        y=data2['system_metadata.id'],\n",
     "        name='openDOAR',\n",
     "        visible = 'legendonly'\n",
     "    ),\n",
@@ -13036,7 +13153,7 @@
     "    ),\n",
     "    go.Bar(\n",
     "        x=data4.index,\n",
-    "        y=data4['url'],\n",
+    "        y=data4['id'],\n",
     "        name='FAIRsharing',\n",
     "        visible = 'legendonly'\n",
     "    )\n",
@@ -13059,7 +13176,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 36,
+   "execution_count": 117,
    "metadata": {},
    "outputs": [
     {
@@ -13073,12 +13190,12 @@
          "fill": "toself",
          "name": "re3data",
          "r": [
-          41,
-          341,
-          2987,
-          3286,
-          233,
-          45
+          47,
+          379,
+          3325,
+          3612,
+          257,
+          46
          ],
          "theta": [
           "AF",
@@ -13094,12 +13211,12 @@
          "fill": "toself",
          "name": "OpenDOAR",
          "r": [
-          234,
-          1439,
-          2207,
-          1128,
-          113,
-          575
+          238,
+          1452,
+          2216,
+          1133,
+          111,
+          581
          ],
          "theta": [
           "AF",
@@ -13115,12 +13232,12 @@
          "fill": "toself",
          "name": "ROAR",
          "r": [
-          190,
-          1069,
-          1877,
-          1078,
-          107,
-          603
+          201,
+          1125,
+          1911,
+          1105,
+          111,
+          630
          ],
          "theta": [
           "AF",
@@ -13137,11 +13254,11 @@
          "name": "FAIRsharing",
          "r": [
           27,
-          320,
-          2176,
-          787,
+          325,
+          2156,
+          795,
           70,
-          14
+          13
          ],
          "theta": [
           "AF",
@@ -13969,9 +14086,9 @@
        }
       },
       "text/html": [
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+       "<div>                            <div id=\"79875b2c-4cf7-4021-9d98-af5cbc68da95\" class=\"plotly-graph-div\" style=\"height:525px; width:100%;\"></div>            <script type=\"text/javascript\">                require([\"plotly\"], function(Plotly) {                    window.PLOTLYENV=window.PLOTLYENV || {};                                    if (document.getElementById(\"79875b2c-4cf7-4021-9d98-af5cbc68da95\")) {                    Plotly.newPlot(                        \"79875b2c-4cf7-4021-9d98-af5cbc68da95\",                        [{\"fill\": \"toself\", \"name\": \"re3data\", \"r\": [47, 379, 3325, 3612, 257, 46], \"theta\": [\"AF\", \"AS\", \"EU\", \"NA\", \"OC\", \"SA\"], \"type\": \"scatterpolar\"}, {\"fill\": \"toself\", \"name\": \"OpenDOAR\", \"r\": [238, 1452, 2216, 1133, 111, 581], \"theta\": [\"AF\", \"AS\", \"EU\", \"NA\", \"OC\", \"SA\"], \"type\": \"scatterpolar\"}, {\"fill\": \"toself\", \"name\": \"ROAR\", \"r\": [201, 1125, 1911, 1105, 111, 630], 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\"white\"}}, \"shapedefaults\": {\"line\": {\"color\": \"#2a3f5f\"}}, \"ternary\": {\"aaxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"baxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"bgcolor\": \"#E5ECF6\", \"caxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}}, \"title\": {\"x\": 0.05}, \"xaxis\": {\"automargin\": true, \"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\", \"title\": {\"standoff\": 15}, \"zerolinecolor\": \"white\", \"zerolinewidth\": 2}, \"yaxis\": {\"automargin\": true, \"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\", \"title\": {\"standoff\": 15}, \"zerolinecolor\": \"white\", \"zerolinewidth\": 2}}}},                        {\"responsive\": true}                    ).then(function(){\n",
        "                            \n",
-       "var gd = document.getElementById('9cbcf419-3870-4cb7-8136-03297410e899');\n",
+       "var gd = document.getElementById('79875b2c-4cf7-4021-9d98-af5cbc68da95');\n",
        "var x = new MutationObserver(function (mutations, observer) {{\n",
        "        var display = window.getComputedStyle(gd).display;\n",
        "        if (!display || display === 'none') {{\n",
@@ -14001,19 +14118,19 @@
     }
    ],
    "source": [
-    "data1 = re3data_institutions.groupby('org_continent')[['re3data_id']].count()\n",
-    "data2 = opendoar_institutions.groupby('org_continent')[['opendoar_id']].count()\n",
-    "data3 = roar_df.groupby('continent')[['eprintid']].count()\n",
-    "data4 = fairsharing_countries.groupby('continent')[['url']].count()\n",
+    "data1 = re3data_institutions.groupby('org_continent')[['orgIdentifier']].count()\n",
+    "data2 = opendoar_institutions.groupby('org_continent')[['system_metadata.id']].count()\n",
+    "data3 = roar_institutions.groupby('continent')[['eprintid']].count()\n",
+    "data4 = fairsharing_countries.groupby('continent')[['id']].count()\n",
     "\n",
     "plot = [\n",
     "    go.Scatterpolar(\n",
-    "        r=data1.re3data_id,\n",
+    "        r=data1.orgIdentifier,\n",
     "        theta=data1.index,\n",
     "        fill='toself',\n",
     "        name='re3data'),\n",
     "    go.Scatterpolar(\n",
-    "        r=data2.opendoar_id,\n",
+    "        r=data2['system_metadata.id'],\n",
     "        theta=data2.index,\n",
     "        fill='toself',\n",
     "        name='OpenDOAR'),\n",
@@ -14023,7 +14140,7 @@
     "        fill='toself',\n",
     "        name='ROAR'),\n",
     "    go.Scatterpolar(\n",
-    "        r=data4.url,\n",
+    "        r=data4.id,\n",
     "        theta=data4.index,\n",
     "        fill='toself',\n",
     "        name='FAIRsharing')\n",