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{
"cells": [
{
"cell_type": "code",
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"execution_count": 1,
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"metadata": {},
"outputs": [],
"source": [
"import ast\n",
"import csv\n",
"import json\n",
"import reverse_geocoder as rg\n",
"\n",
"import numpy as np\n",
"import pandas as pd\n",
"\n",
"import pycountry_convert\n",
"\n",
"import matplotlib.pyplot as plt\n",
"from matplotlib_venn import venn2, venn2_circles\n",
"\n",
"import plotly\n",
"from plotly.offline import iplot, init_notebook_mode\n",
"import plotly.graph_objs as go\n",
"import plotly.express as px\n",
"\n",
"pd.set_option('display.max_columns', None)"
]
},
{
"cell_type": "code",
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"execution_count": 2,
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"metadata": {},
"outputs": [],
"source": [
"def country_to_countrycode(country):\n",
" if pd.isna(country):\n",
" return np.nan\n",
" else:\n",
" try:\n",
" return pycountry_convert.country_name_to_country_alpha3(country)\n",
" except:\n",
" return np.nan\n",
" \n",
"def countrycode_iso2_to_countrycode_iso3(country):\n",
" if pd.isna(country):\n",
" return np.nan\n",
" else:\n",
" try:\n",
" return pycountry_convert.country_name_to_country_alpha3(pycountry_convert.country_alpha2_to_country_name(country))\n",
" except:\n",
" return np.nan\n",
"\n",
"def countrycode_to_continent(country_code):\n",
" if pd.isna(country_code):\n",
" return np.nan\n",
" else:\n",
" try:\n",
" return pycountry_convert.country_alpha2_to_continent_code(pycountry_convert.country_alpha3_to_country_alpha2(country_code))\n",
" except:\n",
" return np.nan"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Loading datasets"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**re3data**"
]
},
{
"cell_type": "code",
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"execution_count": 3,
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"metadata": {},
"outputs": [
{
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" <th>keyword</th>\n",
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" </tr>\n",
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" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>r3d100000001</td>\n",
" <td>Odum Institute Archive Dataverse</td>\n",
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" <td>eng</td>\n",
" <td>[]</td>\n",
" <td>https://dataverse.unc.edu/dataverse/odum</td>\n",
" <td>[]</td>\n",
" <td>[\"https://dataverse.unc.edu/dataverse/odum#\", ...</td>\n",
" <td>The Odum Institute Archive Dataverse contains ...</td>\n",
" <td>eng</td>\n",
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" <td>[disciplinary]</td>\n",
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" <td>{\"size\": \"13 dataverses; 3.050 datasets\", \"upd...</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>[\"eng\"]</td>\n",
" <td>[{'name': '1 Humanities and Social Sciences', ...</td>\n",
" <td>NaN</td>\n",
" <td>[{'name': 'Databases', 'scheme': 'parse'}, {'n...</td>\n",
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" <td>[dataProvider]</td>\n",
" <td>[FAIR, Middle East, crime, demography, economy...</td>\n",
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" <td>[{'institutionName': 'Odum Institute for Resea...</td>\n",
" <td>[{\"policyName\": \"Collection Development Policy...</td>\n",
" <td>{\"databaseAccessType\": \"open\", \"databaseAcces...</td>\n",
" <td>[{\"databaseLicenseName\": \"CC0\", \"databaseLicen...</td>\n",
" <td>[{\"dataAccessType\": \"embargoed\", \"dataAccessRe...</td>\n",
" <td>[{\"dataLicenseName\": \"CC\", \"dataLicenseURL\": \"...</td>\n",
" <td>restricted</td>\n",
" <td>[]</td>\n",
" <td>[\"DataVerse\"]</td>\n",
" <td>NaN</td>\n",
" <td>{}</td>\n",
" <td>[\"DOI\"]</td>\n",
" <td>NaN</td>\n",
" <td>[]</td>\n",
" <td>unknown</td>\n",
" <td>yes</td>\n",
" <td>[\"other\"]</td>\n",
" <td>[{\"metadataStandardName\": \"DDI - Data Document...</td>\n",
" <td>{}</td>\n",
" <td>Odum Dataverse is covered by Thomson Reuters D...</td>\n",
" <td>2013-06-10</td>\n",
" <td>2021-07-06</td>\n",
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" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>r3d100000002</td>\n",
" <td>Access to Archival Databases</td>\n",
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" <td>eng</td>\n",
" <td>[{'additionalName': 'AAD', 'additionalNameLang...</td>\n",
" <td>https://aad.archives.gov/aad/</td>\n",
" <td>[RRID:SCR_010479, RRID:nlx_157752]</td>\n",
" <td>[\"https://www.archives.gov/contact\"]</td>\n",
" <td>You will find in the Access to Archival Databa...</td>\n",
" <td>eng</td>\n",
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" <td>[disciplinary]</td>\n",
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" <td>{\"size\": \"\", \"updatedp\": \"\"}</td>\n",
" <td>1985</td>\n",
" <td>NaN</td>\n",
" <td>[\"eng\", \"spa\"]</td>\n",
" <td>[{'name': '1 Humanities and Social Sciences', ...</td>\n",
" <td>https://www.archives.gov/publications/general-...</td>\n",
" <td>[{'name': 'Images', 'scheme': 'parse'}, {'name...</td>\n",
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" <td>[dataProvider]</td>\n",
" <td>[US History]</td>\n",
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" <td>[{'institutionName': 'The U.S. National Archiv...</td>\n",
" <td>[{\"policyName\": \"Contribution Policy\", \"policy...</td>\n",
" <td>{\"databaseAccessType\": \"open\", \"databaseAcces...</td>\n",
" <td>[]</td>\n",
" <td>[{\"dataAccessType\": \"open\", \"dataAccessRestric...</td>\n",
" <td>[{\"dataLicenseName\": \"Copyrights\", \"dataLicens...</td>\n",
" <td>restricted</td>\n",
" <td>[]</td>\n",
" <td>[\"unknown\"]</td>\n",
" <td>no</td>\n",
" <td>{\"api\": \"https://www.archives.gov/developer#to...</td>\n",
" <td>[\"none\"]</td>\n",
" <td>https://aad.archives.gov/aad/help/getting-star...</td>\n",
" <td>[]</td>\n",
" <td>unknown</td>\n",
" <td>unknown</td>\n",
" <td>[]</td>\n",
" <td>[]</td>\n",
" <td>{\"syndication\": \"http://www.archives.gov/socia...</td>\n",
" <td>NaN</td>\n",
" <td>2012-07-04</td>\n",
" <td>2021-05-25</td>\n",
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" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>r3d100000004</td>\n",
" <td>Datenbank Gesprochenes Deutsch</td>\n",
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" <td>deu</td>\n",
" <td>[{'additionalName': 'DGD', 'additionalNameLang...</td>\n",
" <td>https://dgd.ids-mannheim.de/</td>\n",
" <td>[]</td>\n",
" <td>[\"dgd@ids-mannheim.de\"]</td>\n",
" <td>The \"Database for Spoken German (DGD)\" is a co...</td>\n",
" <td>eng</td>\n",
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" <td>[disciplinary]</td>\n",
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" <td>{\"size\": \"34 corpora\", \"updatedp\": \"2020-02-03\"}</td>\n",
" <td>2012</td>\n",
" <td>NaN</td>\n",
" <td>[\"deu\"]</td>\n",
" <td>[{'name': '1 Humanities and Social Sciences', ...</td>\n",
" <td>https://dgd.ids-mannheim.de/dgd/pragdb.dgd_ext...</td>\n",
" <td>[{'name': 'Audiovisual data', 'scheme': 'parse...</td>\n",
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" <td>[dataProvider, serviceProvider]</td>\n",
" <td>[Australian German, FOLK, German dialects, Pfe...</td>\n",
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" <td>[{'institutionName': 'Institut für Deutsche Sp...</td>\n",
" <td>[{\"policyName\": \"Erfurter Aufruf zur Sicherung...</td>\n",
" <td>{\"databaseAccessType\": \"restricted\", \"databas...</td>\n",
" <td>[]</td>\n",
" <td>[{\"dataAccessType\": \"restricted\", \"dataAccessR...</td>\n",
" <td>[{\"dataLicenseName\": \"other\", \"dataLicenseURL\"...</td>\n",
" <td>restricted</td>\n",
" <td>[]</td>\n",
" <td>[\"other\"]</td>\n",
" <td>yes</td>\n",
" <td>{}</td>\n",
" <td>[\"none\"]</td>\n",
" <td>http://agd.ids-mannheim.de/konditionen.shtml</td>\n",
" <td>[]</td>\n",
" <td>unknown</td>\n",
" <td>unknown</td>\n",
" <td>[\"RatSWD\"]</td>\n",
" <td>[]</td>\n",
" <td>{}</td>\n",
" <td>NaN</td>\n",
" <td>2012-07-20</td>\n",
" <td>2020-08-27</td>\n",
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" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>r3d100000005</td>\n",
" <td>UNC Dataverse</td>\n",
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" <td>eng</td>\n",
" <td>[{'additionalName': 'University of North Carol...</td>\n",
" <td>https://dataverse.unc.edu/</td>\n",
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" <td>[FAIRsharing_doi:10.25504/FAIRsharing.pS2p8c]</td>\n",
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" <td>[\"https://dataverse.unc.edu/\", \"odumarchive@un...</td>\n",
" <td>UNC Dataverse is an open-source repository sof...</td>\n",
" <td>eng</td>\n",
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" <td>[institutional]</td>\n",
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" <td>{\"size\": \"186 dataverses; 25.272 studies; 229....</td>\n",
" <td>2011</td>\n",
" <td>NaN</td>\n",
" <td>[\"eng\"]</td>\n",
" <td>[{'name': '1 Humanities and Social Sciences', ...</td>\n",
" <td>https://odum.unc.edu/about/mission-vision/</td>\n",
" <td>[{'name': 'Archived data', 'scheme': 'parse'},...</td>\n",
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" <td>[dataProvider, serviceProvider]</td>\n",
" <td>[FAIR, census, demographic survey, demography,...</td>\n",
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" <td>[{'institutionName': 'Odum Institute for Resea...</td>\n",
" <td>[{\"policyName\": \"Collection Development Policy...</td>\n",
" <td>{\"databaseAccessType\": \"open\", \"databaseAcces...</td>\n",
" <td>[]</td>\n",
" <td>[{\"dataAccessType\": \"open\", \"dataAccessRestric...</td>\n",
" <td>[{\"dataLicenseName\": \"CC\", \"dataLicenseURL\": \"...</td>\n",
" <td>restricted</td>\n",
" <td>[{\"dataUploadLicenseName\": \"Data Deposit Form\"...</td>\n",
" <td>[\"DataVerse\"]</td>\n",
" <td>yes</td>\n",
" <td>{\"api\": \"https://guides.dataverse.org/en/lates...</td>\n",
" <td>[\"ARK\", \"DOI\", \"PURL\", \"URN\", \"hdl\"]</td>\n",
" <td>https://dataverse.org/best-practices/data-cita...</td>\n",
" <td>[]</td>\n",
" <td>unknown</td>\n",
" <td>yes</td>\n",
" <td>[]</td>\n",
" <td>[{\"metadataStandardName\": \"DDI - Data Document...</td>\n",
" <td>{}</td>\n",
" <td>UNC Dataverse is covered by Clarivate Data Cit...</td>\n",
" <td>2012-07-23</td>\n",
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" <td>2021-10-25</td>\n",
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" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>r3d100000006</td>\n",
" <td>Archaeology Data Service</td>\n",
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" <td>eng</td>\n",
" <td>[{'additionalName': 'ADS', 'additionalNameLang...</td>\n",
" <td>https://archaeologydataservice.ac.uk/</td>\n",
" <td>[FAIRsharing_doi:10.25504/FAIRsharing.hm1mfg]</td>\n",
" <td>[\"help@archaeologydataservice.ac.uk\", \"https:/...</td>\n",
" <td>The ADS is an accredited digital repository fo...</td>\n",
" <td>eng</td>\n",
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" <td>[disciplinary]</td>\n",
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" <td>{\"size\": \"1837 results\", \"updatedp\": \"2020-05-...</td>\n",
" <td>1996-10-01</td>\n",
" <td>NaN</td>\n",
" <td>[\"eng\"]</td>\n",
" <td>[{'name': '1 Humanities and Social Sciences', ...</td>\n",
" <td>https://archaeologydataservice.ac.uk/about/our...</td>\n",
" <td>[{'name': 'Archived data', 'scheme': 'parse'},...</td>\n",
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" <td>[dataProvider, serviceProvider]</td>\n",
" <td>[FAIR, archaeology, cultural heritage, prehist...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[{'institutionName': 'Arts and Humanities Rese...</td>\n",
" <td>[{\"policyName\": \"ADS Guides to good practice\",...</td>\n",
" <td>{\"databaseAccessType\": \"open\", \"databaseAcces...</td>\n",
" <td>[{\"databaseLicenseName\": \"CC\", \"databaseLicens...</td>\n",
" <td>[{\"dataAccessType\": \"open\", \"dataAccessRestric...</td>\n",
" <td>[{\"dataLicenseName\": \"CC\", \"dataLicenseURL\": \"...</td>\n",
" <td>restricted</td>\n",
" <td>[{\"dataUploadLicenseName\": \"Guidelines for Dep...</td>\n",
" <td>[\"other\"]</td>\n",
" <td>yes</td>\n",
" <td>{\"api\": \"https://archaeologydataservice.ac.uk/...</td>\n",
" <td>[\"DOI\"]</td>\n",
" <td>https://archaeologydataservice.ac.uk/advice/te...</td>\n",
" <td>[]</td>\n",
" <td>unknown</td>\n",
" <td>yes</td>\n",
" <td>[\"other\"]</td>\n",
" <td>[{\"metadataStandardName\": \"DataCite Metadata S...</td>\n",
" <td>{\"syndication\": \"https://archaeologydataservic...</td>\n",
" <td>ADS is covered by Clarivate Data Citation Inde...</td>\n",
" <td>2012-07-23</td>\n",
" <td>2021-09-02</td>\n",
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" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
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" orgIdentifier repositoryName repositoryName.language \\\n",
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"\n",
" repositoryURL \\\n",
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"1 https://aad.archives.gov/aad/ \n",
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"3 https://dataverse.unc.edu/ \n",
"4 https://archaeologydataservice.ac.uk/ \n",
"\n",
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2021-10-08 13:55:20 +02:00
"4 [FAIRsharing_doi:10.25504/FAIRsharing.hm1mfg] \n",
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"4 [\"help@archaeologydataservice.ac.uk\", \"https:/... \n",
"\n",
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"\n",
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"4 [disciplinary] {\"size\": \"1837 results\", \"updatedp\": \"2020-05-... \n",
"\n",
" startDate endDate repositoryLanguage \\\n",
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"2 2012 NaN [\"deu\"] \n",
"3 2011 NaN [\"eng\"] \n",
"4 1996-10-01 NaN [\"eng\"] \n",
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"\n",
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2021-10-08 13:55:20 +02:00
"0 [{'name': '1 Humanities and Social Sciences', ... \n",
"1 [{'name': '1 Humanities and Social Sciences', ... \n",
"2 [{'name': '1 Humanities and Social Sciences', ... \n",
"3 [{'name': '1 Humanities and Social Sciences', ... \n",
"4 [{'name': '1 Humanities and Social Sciences', ... \n",
"\n",
" missionStatementURL \\\n",
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"4 https://archaeologydataservice.ac.uk/about/our... \n",
"\n",
" contentType \\\n",
"0 [{'name': 'Databases', 'scheme': 'parse'}, {'n... \n",
"1 [{'name': 'Images', 'scheme': 'parse'}, {'name... \n",
"2 [{'name': 'Audiovisual data', 'scheme': 'parse... \n",
"3 [{'name': 'Archived data', 'scheme': 'parse'},... \n",
"4 [{'name': 'Archived data', 'scheme': 'parse'},... \n",
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"\n",
2021-10-08 13:55:20 +02:00
" providerType \\\n",
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"0 [dataProvider] \n",
"1 [dataProvider] \n",
"2 [dataProvider, serviceProvider] \n",
"3 [dataProvider, serviceProvider] \n",
"4 [dataProvider, serviceProvider] \n",
"\n",
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"2 [Australian German, FOLK, German dialects, Pfe... \n",
"3 [FAIR, census, demographic survey, demography,... \n",
"4 [FAIR, archaeology, cultural heritage, prehist... \n",
"\n",
2021-10-08 13:55:20 +02:00
" institution \\\n",
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"2 [{'institutionName': 'Institut für Deutsche Sp... \n",
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2021-07-22 11:03:05 +02:00
]
},
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"execution_count": 3,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"re3data_df = pd.read_csv('../data/raw/re3data.tsv', delimiter='\\t',\n",
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" converters={'subject': ast.literal_eval,\n",
" 'keyword': ast.literal_eval,\n",
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" 'additionalName': ast.literal_eval,\n",
" 'repositoryIdentifier': ast.literal_eval,\n",
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" 'type': ast.literal_eval,\n",
2021-10-08 13:55:20 +02:00
" 'contentType': ast.literal_eval,\n",
" 'providerType': ast.literal_eval,\n",
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" 'institution': ast.literal_eval\n",
2021-10-08 13:55:20 +02:00
" })\n",
"\n",
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"re3data_df.head()"
]
},
{
"cell_type": "code",
2022-03-17 10:33:11 +01:00
"execution_count": 4,
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"metadata": {
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},
"outputs": [
{
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2022-02-14 13:34:42 +01:00
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2022-02-14 13:34:42 +01:00
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2022-02-14 13:34:42 +01:00
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2022-02-14 13:34:42 +01:00
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"re3data_df.describe(include='all')"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**openDOAR**"
]
},
{
"cell_type": "code",
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"execution_count": 5,
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"metadata": {},
"outputs": [
{
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" system_metadata.id repository_metadata.name \\\n",
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"0 134 {\"name\": \"eldorado - repository of the tu dort... \n",
"1 58 {\"name\": \"archive ouverte en sciences de linfo... \n",
"2 93 {\"name\": \"digitalcommons@the texas medical cen... \n",
"3 68 {\"name\": \"cognitive sciences eprint archive\", ... \n",
"4 84 {\"name\": \"digital commons@carleton college\", \"... \n",
"\n",
" repository_metadata.alternativename \\\n",
"0 [{'name': 'eldorado - ressourcen aus und für l... \n",
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"4 [] \n",
"\n",
" repository_metadata.url repository_metadata.description \\\n",
"0 https://eldorado.tu-dortmund.de NaN \n",
"1 https://archivesic.ccsd.cnrs.fr NaN \n",
"2 http://digitalcommons.library.tmc.edu/ NaN \n",
"3 http://cogprints.org/ NaN \n",
"4 http://digitalcommons.carleton.edu/ NaN \n",
"\n",
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"0 [arts, humanities, science, mathematics, socia... \n",
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"2 [health and medicine] \n",
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"0 [journal_articles, conference_and_workshop_pap... \n",
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"\n",
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"1 https://api.archives-ouvertes.fr/oai/archivesic \n",
"2 http://digitalcommons.library.tmc.edu/do/oai/ \n",
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"\n",
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"\n",
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"0 9629.0 \n",
"1 55492.0 \n",
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"0 20963.0 \n",
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]
},
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"execution_count": 5,
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"metadata": {},
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}
],
"source": [
"opendoar_df = pd.read_csv('../data/raw/openDoar.tsv', delimiter='\\t',\n",
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" converters={'repository_metadata.content_subjects': ast.literal_eval,\n",
" 'repository_metadata.alternativename': ast.literal_eval,\n",
" 'repository_metadata.content_types': ast.literal_eval,\n",
" 'organization': ast.literal_eval\n",
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" },\n",
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" dtype={'system_metadata.id': str})\n",
"\n",
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"opendoar_df.head()"
]
},
{
"cell_type": "code",
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"execution_count": 6,
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>4.212648e+04</td>\n",
" <td>6.611068e+06</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>min</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>0.000000e+00</td>\n",
" <td>0.000000e+00</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>25%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>0.000000e+00</td>\n",
2022-02-14 13:34:42 +01:00
" <td>8.937500e+02</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>50%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>4.225000e+02</td>\n",
" <td>4.012500e+03</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>75%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2.931500e+03</td>\n",
" <td>1.629350e+04</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>max</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>1.817531e+06</td>\n",
" <td>4.200000e+08</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
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" system_metadata.id repository_metadata.name \\\n",
"count 5811 5811 \n",
"unique 5811 5780 \n",
"top 134 {\"name\": \"arch\", \"language\": \"en\"} \n",
"freq 1 3 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" repository_metadata.alternativename \\\n",
2022-02-14 13:34:42 +01:00
"count 5811 \n",
"unique 2116 \n",
2021-10-08 13:55:20 +02:00
"top [] \n",
2022-02-14 13:34:42 +01:00
"freq 3656 \n",
2021-10-08 13:55:20 +02:00
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-02-14 13:34:42 +01:00
" repository_metadata.url repository_metadata.description \\\n",
"count 5810 0.0 \n",
"unique 5772 NaN \n",
"top http://harp.lib.hiroshima-u.ac.jp/ NaN \n",
"freq 3 NaN \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" repository_metadata.type repository_metadata.content_languages \\\n",
2022-02-14 13:34:42 +01:00
"count 5810 5811 \n",
"unique 4 1 \n",
"top institutional [] \n",
"freq 5161 5811 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" system_metadata.date_modified system_metadata.date_created \\\n",
2022-02-14 13:34:42 +01:00
"count 5811 5811 \n",
"unique 171 5643 \n",
"top 2022-01-12 15:35:47 2020-09-18 12:53:48 \n",
"freq 73 81 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
2022-02-14 13:34:42 +01:00
" repository_metadata.content_subjects \\\n",
"count 5811 \n",
"unique 237 \n",
"top [science, technology, engineering, mathematics... \n",
"freq 3321 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" repository_metadata.content_types \\\n",
"count 5811 \n",
"unique 477 \n",
"top [theses_and_dissertations] \n",
"freq 469 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" organization policy_urls \\\n",
2022-02-14 13:34:42 +01:00
"count 5811 5811 \n",
"unique 5212 678 \n",
2021-10-08 13:55:20 +02:00
"top [{'name': 'rijksuniversiteit groningen', 'alte... [] \n",
2022-02-14 13:34:42 +01:00
"freq 26 5131 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
2022-02-14 13:34:42 +01:00
" repository_metadata.software repository_metadata.oai_url \\\n",
"count 5811 4447 \n",
"unique 32 4415 \n",
"top {\"name\": \"dspace\", \"version\": \"\"} https://api.figshare.com/v2/oai \n",
"freq 2273 3 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" system_metadata.publicly_visible \\\n",
"count 5811 \n",
"unique 1 \n",
"top yes \n",
"freq 5811 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" repository_metadata.repository_status \\\n",
"count 0.0 \n",
"unique NaN \n",
"top NaN \n",
"freq NaN \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" repository_metadata.fulltext_record_count \\\n",
2022-02-14 13:34:42 +01:00
"count 2.292000e+03 \n",
2021-10-08 13:55:20 +02:00
"unique NaN \n",
"top NaN \n",
"freq NaN \n",
2022-02-14 13:34:42 +01:00
"mean 5.022890e+03 \n",
"std 4.212648e+04 \n",
2021-10-08 13:55:20 +02:00
"min 0.000000e+00 \n",
"25% 0.000000e+00 \n",
2022-02-14 13:34:42 +01:00
"50% 4.225000e+02 \n",
"75% 2.931500e+03 \n",
2021-10-08 13:55:20 +02:00
"max 1.817531e+06 \n",
"\n",
" repository_metadata.metadata_record_count \n",
2022-02-14 13:34:42 +01:00
"count 4.184000e+03 \n",
2021-10-08 13:55:20 +02:00
"unique NaN \n",
"top NaN \n",
"freq NaN \n",
2022-02-14 13:34:42 +01:00
"mean 1.765556e+05 \n",
"std 6.611068e+06 \n",
2021-10-08 13:55:20 +02:00
"min 0.000000e+00 \n",
2022-02-14 13:34:42 +01:00
"25% 8.937500e+02 \n",
"50% 4.012500e+03 \n",
"75% 1.629350e+04 \n",
2021-10-08 13:55:20 +02:00
"max 4.200000e+08 "
2021-07-22 11:03:05 +02:00
]
},
2022-03-17 10:33:11 +01:00
"execution_count": 6,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"opendoar_df.describe(include='all')"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**ROAR**"
]
},
{
"cell_type": "code",
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"execution_count": 7,
2021-07-22 11:03:05 +02:00
"metadata": {},
"outputs": [
{
"data": {
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" <th></th>\n",
" <th>eprintid</th>\n",
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" <th>rev_number</th>\n",
" <th>eprint_status</th>\n",
" <th>userid</th>\n",
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" <th>longitude</th>\n",
" <th>relation_type</th>\n",
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" <th>item_issues_id</th>\n",
" <th>item_issues_type</th>\n",
" <th>item_issues_description</th>\n",
" <th>item_issues_timestamp</th>\n",
" <th>item_issues_status</th>\n",
" <th>item_issues_reported_by</th>\n",
" <th>item_issues_resolved_by</th>\n",
" <th>item_issues_comment</th>\n",
" <th>item_issues_count</th>\n",
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" <th>sword_slug</th>\n",
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" <th>home_page</th>\n",
" <th>title</th>\n",
2021-10-08 13:55:20 +02:00
" <th>oai_pmh</th>\n",
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" <th>rss_feed</th>\n",
" <th>twitter_feed</th>\n",
" <th>description</th>\n",
" <th>fulltext</th>\n",
" <th>open_access</th>\n",
" <th>mandate</th>\n",
" <th>organisation_title</th>\n",
" <th>organisation_home_page</th>\n",
2021-07-22 11:03:05 +02:00
" <th>location_country</th>\n",
2021-10-08 13:55:20 +02:00
" <th>location_city</th>\n",
" <th>location_latitude</th>\n",
" <th>location_longitude</th>\n",
" <th>software</th>\n",
" <th>geoname</th>\n",
" <th>version</th>\n",
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" <th>subjects</th>\n",
2021-10-08 13:55:20 +02:00
" <th>date</th>\n",
" <th>note</th>\n",
" <th>suggestions</th>\n",
" <th>activity_low</th>\n",
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" <th>recordcount</th>\n",
" <th>recordhistory</th>\n",
" <th>fulltexts_total</th>\n",
" <th>fulltexts_docs</th>\n",
" <th>fulltexts_rtotal</th>\n",
" <th>fulltexts_rdocs</th>\n",
" <th>registry_name</th>\n",
" <th>registry_id</th>\n",
" <th>submit_to</th>\n",
" <th>submitted_to_name</th>\n",
" <th>submitted_to_done</th>\n",
" <th>webometrics_rank</th>\n",
" <th>webometrics_size</th>\n",
" <th>webometrics_visibility</th>\n",
" <th>webometrics_rich_files</th>\n",
" <th>webometrics_scholar</th>\n",
" <th>monthly_deposits</th>\n",
" <th>total_deposits</th>\n",
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2021-07-22 11:03:05 +02:00
" </tr>\n",
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2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
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" <td>1</td>\n",
2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>disk0/00/00/00/01</td>\n",
" <td>2010-01-06 13:43:48</td>\n",
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" <td>2010-01-06 13:43:48</td>\n",
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2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
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2021-10-08 13:55:20 +02:00
" <td>show</td>\n",
2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>0</td>\n",
2021-07-22 11:03:05 +02:00
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2021-10-08 13:55:20 +02:00
" <td>http://archivesic.ccsd.cnrs.fr/</td>\n",
" <td>@RCHIVESIC</td>\n",
" <td>http://archivesic.ccsd.cnrs.fr/oai/oai.php</td>\n",
2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fr</td>\n",
2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
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" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 13:55:20 +02:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 13:55:20 +02:00
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2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[opendoar, celestial]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[669, 58]</td>\n",
2021-10-08 13:55:20 +02:00
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2021-07-22 11:03:05 +02:00
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" <td>NaN</td>\n",
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2021-10-08 13:55:20 +02:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 13:55:20 +02:00
" <td>disk0/00/00/00/10</td>\n",
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" <td>2010-01-06 13:43:48</td>\n",
" <td>institutional</td>\n",
2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>show</td>\n",
2021-07-22 11:03:05 +02:00
" <td>NaN</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>0</td>\n",
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" <td>NaN</td>\n",
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" <td>TRUE</td>\n",
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" <td>Uppsala</td>\n",
" <td>59.8667</td>\n",
" <td>17.6333</td>\n",
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" <td>2005-12-08 13:15:22</td>\n",
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2022-03-17 10:33:11 +01:00
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" <th>2</th>\n",
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" <td>2010-01-06 13:45:01</td>\n",
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" <td>NaN</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
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" <td>PAM - Portuguese Archive of Mathematics</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
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" <td>TRUE</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>pt</td>\n",
" <td>Bellevue, WA</td>\n",
" <td>47.6034</td>\n",
" <td>-122.155</td>\n",
" <td>dspace</td>\n",
" <td>geoname_2_PT</td>\n",
" <td>other</td>\n",
" <td>NaN</td>\n",
" <td>2006-05-04 10:48:14</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
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" <th>3</th>\n",
" <td>10001</td>\n",
" <td>20</td>\n",
" <td>archive</td>\n",
" <td>91</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>disk0/00/01/00/01</td>\n",
" <td>2015-08-08 14:52:11</td>\n",
" <td>2016-03-21 19:44:01</td>\n",
" <td>2015-08-08 14:52:11</td>\n",
" <td>subject</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>show</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>http://edoc.sub.uni-hamburg.de/klimawandel/</td>\n",
" <td>Klimawandel Dokumentenserver</td>\n",
" <td>http://edoc.sub.uni-hamburg.de/klimawandel/oai</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>The \"Documentenserver Klimawandel\" (Repository...</td>\n",
" <td>TRUE</td>\n",
" <td>TRUE</td>\n",
" <td>TRUE</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[Helmholtz-Zentrum Geesthacht, Climate Service...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[http://www.climateservicecenter.de/, http://w...</td>\n",
" <td>de</td>\n",
" <td>Hamburg</td>\n",
" <td>53.5511</td>\n",
" <td>9.9937</td>\n",
" <td>opus</td>\n",
" <td>geoname_2_DE</td>\n",
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2022-03-17 10:33:11 +01:00
" <td>[GE, S1, GF, HD, G1]</td>\n",
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" <td>2015-07-02 08:08:31</td>\n",
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" <td>NaN</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>[opendoar, celestial]</td>\n",
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" <td>[3408, 5881]</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
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" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
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" <td>10008</td>\n",
" <td>11</td>\n",
" <td>archive</td>\n",
" <td>404</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>disk0/00/01/00/08</td>\n",
" <td>2015-08-08 14:52:26</td>\n",
" <td>2016-03-21 19:43:51</td>\n",
" <td>2015-08-08 14:52:26</td>\n",
" <td>institutional</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>show</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>http://creativematter.skidmore.edu/</td>\n",
" <td>Creative Matter | Skidmore College Research</td>\n",
" <td>http://creativematter.skidmore.edu/do/oai/</td>\n",
" <td>NaN</td>\n",
" <td>http://creativematter.skidmore.edu/recent.rss</td>\n",
" <td>NaN</td>\n",
" <td>Welcome to Creative Matter, a repository for t...</td>\n",
" <td>TRUE</td>\n",
" <td>FALSE</td>\n",
" <td>FALSE</td>\n",
" <td>Skidmore College</td>\n",
" <td>http://www.skidmore.edu/</td>\n",
" <td>us</td>\n",
" <td>Saratoga Springs</td>\n",
" <td>43.0961</td>\n",
" <td>-73.7818</td>\n",
" <td>bepress</td>\n",
" <td>geoname_2_US</td>\n",
" <td>other</td>\n",
" <td>NaN</td>\n",
" <td>2015-07-06 17:35:50</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>celestial</td>\n",
" <td>5882</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
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" </tr>\n",
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],
"text/plain": [
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" eprintid rev_number eprint_status userid importid source \\\n",
"0 1 633 archive 1 NaN NaN \n",
"1 10 511 archive 1 NaN NaN \n",
"2 1000 274 archive 1 NaN NaN \n",
"3 10001 20 archive 91 NaN NaN \n",
"4 10008 11 archive 404 NaN NaN \n",
"\n",
" dir datestamp lastmod \\\n",
"0 disk0/00/00/00/01 2010-01-06 13:43:48 2011-07-18 05:40:07 \n",
"1 disk0/00/00/00/10 2010-01-06 13:43:48 2011-07-18 05:40:13 \n",
"2 disk0/00/00/10/00 2010-01-06 13:45:01 2011-07-06 08:21:21 \n",
"3 disk0/00/01/00/01 2015-08-08 14:52:11 2016-03-21 19:44:01 \n",
"4 disk0/00/01/00/08 2015-08-08 14:52:26 2016-03-21 19:43:51 \n",
"\n",
" status_changed type succeeds commentary \\\n",
"0 2010-01-06 13:43:48 subject NaN NaN \n",
"1 2010-01-06 13:43:48 institutional NaN NaN \n",
"2 2010-01-06 13:45:01 subject NaN NaN \n",
"3 2015-08-08 14:52:11 subject NaN NaN \n",
"4 2015-08-08 14:52:26 institutional NaN NaN \n",
"\n",
" metadata_visibility latitude longitude relation_type relation_uri \\\n",
"0 show NaN NaN NaN NaN \n",
"1 show NaN NaN NaN NaN \n",
"2 show NaN NaN NaN NaN \n",
"3 show NaN NaN NaN NaN \n",
"4 show NaN NaN NaN NaN \n",
"\n",
" item_issues_id item_issues_type item_issues_description \\\n",
"0 NaN NaN NaN \n",
"1 NaN NaN NaN \n",
"2 NaN NaN NaN \n",
"3 NaN NaN NaN \n",
"4 NaN NaN NaN \n",
"\n",
" item_issues_timestamp item_issues_status item_issues_reported_by \\\n",
"0 NaN NaN NaN \n",
"1 NaN NaN NaN \n",
"2 NaN NaN NaN \n",
"3 NaN NaN NaN \n",
"4 NaN NaN NaN \n",
"\n",
" item_issues_resolved_by item_issues_comment item_issues_count \\\n",
"0 NaN NaN 0 \n",
"1 NaN NaN 0 \n",
"2 NaN NaN 0 \n",
"3 NaN NaN NaN \n",
"4 NaN NaN NaN \n",
"\n",
" sword_depositor sword_slug exemplar \\\n",
"0 NaN NaN NaN \n",
"1 NaN NaN NaN \n",
"2 NaN NaN NaN \n",
"3 NaN NaN NaN \n",
"4 NaN NaN NaN \n",
"\n",
" home_page \\\n",
"0 http://archivesic.ccsd.cnrs.fr/ \n",
"1 http://www.diva-portal.org/mdh/ \n",
"2 http://pam.pisharp.org/ \n",
"3 http://edoc.sub.uni-hamburg.de/klimawandel/ \n",
"4 http://creativematter.skidmore.edu/ \n",
"\n",
" title \\\n",
"0 @RCHIVESIC \n",
"1 Academic Archive On-line (Mälardalen Universit... \n",
"2 PAM - Portuguese Archive of Mathematics \n",
"3 Klimawandel Dokumentenserver \n",
"4 Creative Matter | Skidmore College Research \n",
"\n",
" oai_pmh sword_endpoint \\\n",
"0 http://archivesic.ccsd.cnrs.fr/oai/oai.php NaN \n",
"1 http://www.diva-portal.org/oai/mdh/OAI NaN \n",
"2 NaN NaN \n",
"3 http://edoc.sub.uni-hamburg.de/klimawandel/oai NaN \n",
"4 http://creativematter.skidmore.edu/do/oai/ NaN \n",
"\n",
" rss_feed twitter_feed \\\n",
"0 NaN NaN \n",
"1 NaN NaN \n",
"2 NaN NaN \n",
"3 NaN NaN \n",
"4 http://creativematter.skidmore.edu/recent.rss NaN \n",
"\n",
" description fulltext open_access \\\n",
"0 NaN NaN NaN \n",
"1 NaN TRUE TRUE \n",
"2 NaN TRUE TRUE \n",
"3 The \"Documentenserver Klimawandel\" (Repository... TRUE TRUE \n",
"4 Welcome to Creative Matter, a repository for t... TRUE FALSE \n",
"\n",
" mandate organisation_title \\\n",
"0 NaN NaN \n",
"1 NaN NaN \n",
"2 NaN NaN \n",
2022-03-17 10:33:11 +01:00
"3 TRUE [Helmholtz-Zentrum Geesthacht, Climate Service... \n",
2021-10-08 13:55:20 +02:00
"4 FALSE Skidmore College \n",
"\n",
" organisation_home_page location_country \\\n",
"0 NaN fr \n",
"1 NaN se \n",
"2 NaN pt \n",
"3 [http://www.climateservicecenter.de/, http://w... de \n",
"4 http://www.skidmore.edu/ us \n",
"\n",
" location_city location_latitude location_longitude software \\\n",
"0 NaN NaN NaN hal \n",
"1 Uppsala 59.8667 17.6333 diva \n",
"2 Bellevue, WA 47.6034 -122.155 dspace \n",
"3 Hamburg 53.5511 9.9937 opus \n",
"4 Saratoga Springs 43.0961 -73.7818 bepress \n",
"\n",
" geoname version subjects date note \\\n",
"0 geoname_2_FR other NaN 2002-05-17 19:24:41 NaN \n",
"1 geoname_2_SE other NaN 2005-12-08 13:15:22 NaN \n",
"2 geoname_2_PT other NaN 2006-05-04 10:48:14 NaN \n",
2022-03-17 10:33:11 +01:00
"3 geoname_2_DE other [GE, S1, GF, HD, G1] 2015-07-02 08:08:31 NaN \n",
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"4 geoname_2_US other NaN 2015-07-06 17:35:50 NaN \n",
"\n",
" suggestions activity_low activity_medium activity_high recordcount \\\n",
"0 NaN 0 0 0 25 \n",
"1 NaN 0 0 0 100 \n",
"2 NaN NaN NaN NaN NaN \n",
"3 NaN NaN NaN NaN NaN \n",
"4 NaN NaN NaN NaN NaN \n",
"\n",
" recordhistory fulltexts_total \\\n",
"0 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,... NaN \n",
"1 0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,8,39,100,100,100... NaN \n",
"2 NaN NaN \n",
"3 NaN NaN \n",
"4 NaN NaN \n",
"\n",
" fulltexts_docs fulltexts_rtotal fulltexts_rdocs registry_name \\\n",
"0 NaN NaN NaN [opendoar, celestial] \n",
"1 NaN NaN NaN [opendoar, celestial] \n",
"2 NaN NaN NaN NaN \n",
"3 NaN NaN NaN [opendoar, celestial] \n",
"4 NaN NaN NaN celestial \n",
"\n",
" registry_id submit_to submitted_to_name submitted_to_done \\\n",
2022-03-17 10:33:11 +01:00
"0 [669, 58] NaN NaN NaN \n",
"1 [258, 526] NaN NaN NaN \n",
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"2 NaN NaN NaN NaN \n",
2022-03-17 10:33:11 +01:00
"3 [3408, 5881] NaN NaN NaN \n",
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"4 5882 NaN NaN NaN \n",
"\n",
" webometrics_rank webometrics_size webometrics_visibility \\\n",
"0 NaN NaN NaN \n",
"1 NaN NaN NaN \n",
"2 NaN NaN NaN \n",
"3 NaN NaN NaN \n",
"4 NaN NaN NaN \n",
"\n",
" webometrics_rich_files webometrics_scholar monthly_deposits total_deposits \\\n",
"0 NaN NaN NaN NaN \n",
"1 NaN NaN NaN NaN \n",
"2 NaN NaN NaN NaN \n",
"3 NaN NaN NaN NaN \n",
"4 NaN NaN NaN NaN \n",
"\n",
" association \n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN "
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]
},
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"execution_count": 7,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"roar_df = pd.read_csv('../data/raw/export_roar_CSV.csv', dtype='str')\n",
"roar_df = roar_df.groupby('eprintid').aggregate(set)\n",
"\n",
"def value_or_list(cell_set):\n",
" copy = set(cell_set)\n",
" copy.discard(np.nan) \n",
" if len(copy) == 0:\n",
" return np.nan\n",
" if len(copy) == 1:\n",
" return copy.pop()\n",
" return list(copy)\n",
" \n",
"roar_df = roar_df.applymap(value_or_list)\n",
"roar_df.reset_index(inplace=True)\n",
"\n",
"roar_df.head()"
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]
},
{
"cell_type": "code",
2022-03-17 10:33:11 +01:00
"execution_count": 8,
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"metadata": {},
"outputs": [
{
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" <th>eprintid</th>\n",
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" <th>organisation_title</th>\n",
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" <th>subjects</th>\n",
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" <th>webometrics_rich_files</th>\n",
" <th>webometrics_scholar</th>\n",
" <th>monthly_deposits</th>\n",
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" </tr>\n",
" </thead>\n",
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2022-02-14 13:34:42 +01:00
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2021-10-08 13:55:20 +02:00
" <td>0.0</td>\n",
" <td>0.0</td>\n",
2022-02-14 13:34:42 +01:00
" <td>5444</td>\n",
" <td>5444</td>\n",
" <td>5444</td>\n",
" <td>5444</td>\n",
" <td>5444</td>\n",
" <td>108</td>\n",
2021-10-08 13:55:20 +02:00
" <td>0.0</td>\n",
2022-02-14 13:34:42 +01:00
" <td>5444</td>\n",
2021-10-08 13:55:20 +02:00
" <td>0.0</td>\n",
" <td>0.0</td>\n",
" <td>0.0</td>\n",
" <td>0.0</td>\n",
" <td>63</td>\n",
" <td>63</td>\n",
" <td>63</td>\n",
" <td>63</td>\n",
" <td>63</td>\n",
" <td>0.0</td>\n",
" <td>0.0</td>\n",
" <td>0.0</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2242</td>\n",
2021-10-08 13:55:20 +02:00
" <td>0.0</td>\n",
" <td>0.0</td>\n",
2022-02-14 13:34:42 +01:00
" <td>268</td>\n",
" <td>5437</td>\n",
" <td>5442</td>\n",
" <td>4332</td>\n",
" <td>178</td>\n",
" <td>1538</td>\n",
" <td>116</td>\n",
" <td>3837</td>\n",
" <td>4197</td>\n",
" <td>4197</td>\n",
" <td>3746</td>\n",
" <td>4460</td>\n",
" <td>4286</td>\n",
" <td>5138</td>\n",
" <td>3714</td>\n",
" <td>3725</td>\n",
" <td>3708</td>\n",
" <td>4700</td>\n",
" <td>4730</td>\n",
" <td>5444</td>\n",
" <td>1289</td>\n",
" <td>5429</td>\n",
" <td>218</td>\n",
" <td>189</td>\n",
" <td>2288</td>\n",
" <td>2288</td>\n",
" <td>2288</td>\n",
" <td>2290</td>\n",
" <td>2288</td>\n",
2021-10-08 13:55:20 +02:00
" <td>270</td>\n",
" <td>258</td>\n",
" <td>270</td>\n",
" <td>258</td>\n",
2022-02-14 13:34:42 +01:00
" <td>4605</td>\n",
" <td>4580</td>\n",
" <td>375</td>\n",
2021-10-08 13:55:20 +02:00
" <td>205</td>\n",
" <td>205</td>\n",
" <td>148</td>\n",
" <td>148</td>\n",
" <td>148</td>\n",
" <td>148</td>\n",
" <td>148</td>\n",
" <td>756</td>\n",
" <td>756</td>\n",
2022-02-14 13:34:42 +01:00
" <td>223</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>unique</th>\n",
2022-02-14 13:34:42 +01:00
" <td>5444</td>\n",
" <td>660</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2189</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>5444</td>\n",
" <td>4198</td>\n",
" <td>4043</td>\n",
" <td>4230</td>\n",
2021-10-08 13:55:20 +02:00
" <td>12</td>\n",
2022-02-14 13:34:42 +01:00
" <td>108</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>2</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>48</td>\n",
" <td>5</td>\n",
" <td>62</td>\n",
" <td>4</td>\n",
" <td>3</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>4</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2</td>\n",
2022-02-14 13:34:42 +01:00
" <td>5271</td>\n",
" <td>5143</td>\n",
" <td>4059</td>\n",
" <td>172</td>\n",
" <td>1485</td>\n",
" <td>112</td>\n",
" <td>3359</td>\n",
2021-10-08 13:55:20 +02:00
" <td>2</td>\n",
" <td>2</td>\n",
" <td>2</td>\n",
2022-02-14 13:34:42 +01:00
" <td>3858</td>\n",
" <td>3831</td>\n",
" <td>144</td>\n",
" <td>1884</td>\n",
" <td>2923</td>\n",
" <td>2953</td>\n",
2021-10-08 13:55:20 +02:00
" <td>31</td>\n",
" <td>126</td>\n",
" <td>53</td>\n",
2022-02-14 13:34:42 +01:00
" <td>938</td>\n",
" <td>4898</td>\n",
" <td>210</td>\n",
" <td>173</td>\n",
2021-10-08 13:55:20 +02:00
" <td>72</td>\n",
" <td>54</td>\n",
" <td>16</td>\n",
" <td>741</td>\n",
2022-02-14 13:34:42 +01:00
" <td>1702</td>\n",
2021-10-08 13:55:20 +02:00
" <td>135</td>\n",
" <td>118</td>\n",
" <td>134</td>\n",
" <td>117</td>\n",
2022-02-14 13:34:42 +01:00
" <td>7</td>\n",
2022-03-17 10:33:11 +01:00
" <td>4261</td>\n",
2021-10-08 13:55:20 +02:00
" <td>7</td>\n",
" <td>1</td>\n",
" <td>1</td>\n",
" <td>148</td>\n",
" <td>148</td>\n",
" <td>148</td>\n",
" <td>146</td>\n",
" <td>143</td>\n",
" <td>346</td>\n",
" <td>342</td>\n",
" <td>3</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>top</th>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
" <td>11</td>\n",
" <td>archive</td>\n",
" <td>1</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>disk0/00/00/00/01</td>\n",
" <td>2010-01-06 13:43:48</td>\n",
" <td>2011-07-06 08:24:53</td>\n",
" <td>2010-01-06 13:43:48</td>\n",
" <td>institutional</td>\n",
" <td>10164</td>\n",
" <td>NaN</td>\n",
" <td>show</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>bad_oai_pmh_url_0</td>\n",
" <td>duplicate_title</td>\n",
" <td>Duplicate title to <xhtml:table xmlns:xhtml=\"h...</td>\n",
" <td>2010-01-13 10:44:49</td>\n",
" <td>discovered</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>0</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>FALSE</td>\n",
" <td>http://eprints.upnjatim.ac.id/</td>\n",
" <td>Repositorio Institucional</td>\n",
" <td>http://kce.docressources.info/ws/PMBWs_2</td>\n",
" <td>http://producao.usp.br/sword/servicedocument</td>\n",
" <td>http://eprints.upnjatim.ac.id/cgi/latest_tool?...</td>\n",
" <td>http://my.indexcopernicus.com/fredemoreno</td>\n",
" <td>info:other:archives.eprints.org:import</td>\n",
" <td>TRUE</td>\n",
" <td>TRUE</td>\n",
" <td>FALSE</td>\n",
" <td>Chinese Academy of Science (中国科学院)</td>\n",
" <td>http://www.cas.cn/</td>\n",
" <td>us</td>\n",
" <td>Lima</td>\n",
" <td>34.1607</td>\n",
" <td>-118.139</td>\n",
" <td>dspace</td>\n",
" <td>geoname_2_US</td>\n",
" <td>other</td>\n",
" <td>K1</td>\n",
" <td>2006-05-04 10:48:14</td>\n",
2022-02-14 13:34:42 +01:00
" <td>¿Quién puede depositar documentos en el reposi...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>This repository is hosted by the Texas Digital...</td>\n",
" <td>0</td>\n",
" <td>0</td>\n",
" <td>0</td>\n",
" <td>100</td>\n",
" <td>0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,...</td>\n",
" <td>0</td>\n",
" <td>0</td>\n",
" <td>0</td>\n",
" <td>0</td>\n",
" <td>[opendoar, celestial]</td>\n",
" <td>2479</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[opendoar, roarmap, celestial]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>opendoar</td>\n",
" <td>2021-01-25</td>\n",
" <td>24</td>\n",
" <td>46</td>\n",
" <td>20</td>\n",
" <td>824</td>\n",
" <td>806</td>\n",
" <td>0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,...</td>\n",
" <td>0</td>\n",
" <td>russell_group</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
" <tr>\n",
" <th>freq</th>\n",
" <td>1</td>\n",
2022-02-14 13:34:42 +01:00
" <td>333</td>\n",
" <td>5444</td>\n",
" <td>1330</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>1</td>\n",
" <td>16</td>\n",
" <td>8</td>\n",
" <td>16</td>\n",
2022-02-14 13:34:42 +01:00
" <td>3853</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>5402</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>15</td>\n",
" <td>33</td>\n",
" <td>2</td>\n",
" <td>45</td>\n",
" <td>38</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2201</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-02-14 13:34:42 +01:00
" <td>261</td>\n",
2021-10-08 13:55:20 +02:00
" <td>4</td>\n",
" <td>7</td>\n",
" <td>4</td>\n",
" <td>2</td>\n",
" <td>5</td>\n",
" <td>2</td>\n",
" <td>112</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2805</td>\n",
" <td>2696</td>\n",
" <td>2748</td>\n",
2021-10-08 13:55:20 +02:00
" <td>9</td>\n",
" <td>9</td>\n",
2022-02-14 13:34:42 +01:00
" <td>891</td>\n",
" <td>74</td>\n",
2021-10-08 13:55:20 +02:00
" <td>25</td>\n",
" <td>25</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2341</td>\n",
" <td>845</td>\n",
" <td>4841</td>\n",
2021-10-08 13:55:20 +02:00
" <td>53</td>\n",
" <td>99</td>\n",
" <td>2</td>\n",
" <td>9</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2012</td>\n",
" <td>2074</td>\n",
" <td>2210</td>\n",
" <td>730</td>\n",
2021-10-08 13:55:20 +02:00
" <td>95</td>\n",
" <td>113</td>\n",
" <td>114</td>\n",
" <td>113</td>\n",
" <td>114</td>\n",
2022-02-14 13:34:42 +01:00
" <td>2106</td>\n",
2021-10-08 13:55:20 +02:00
" <td>4</td>\n",
2022-02-14 13:34:42 +01:00
" <td>119</td>\n",
2021-10-08 13:55:20 +02:00
" <td>205</td>\n",
" <td>205</td>\n",
" <td>1</td>\n",
2021-07-22 11:03:05 +02:00
" <td>1</td>\n",
" <td>1</td>\n",
2021-10-08 13:55:20 +02:00
" <td>3</td>\n",
" <td>5</td>\n",
" <td>387</td>\n",
" <td>387</td>\n",
2022-02-14 13:34:42 +01:00
" <td>130</td>\n",
2021-07-22 11:03:05 +02:00
" </tr>\n",
2021-10-08 13:55:20 +02:00
" <tr>\n",
" <th>mean</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>std</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>min</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>25%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>50%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>75%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>max</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" eprintid rev_number eprint_status userid importid source \\\n",
2022-02-14 13:34:42 +01:00
"count 5444 5444 5444 5444 0.0 0.0 \n",
"unique 5444 660 1 2189 NaN NaN \n",
2021-10-08 13:55:20 +02:00
"top 1 11 archive 1 NaN NaN \n",
2022-02-14 13:34:42 +01:00
"freq 1 333 5444 1330 NaN NaN \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN NaN NaN \n",
"\n",
" dir datestamp lastmod \\\n",
2022-02-14 13:34:42 +01:00
"count 5444 5444 5444 \n",
"unique 5444 4198 4043 \n",
2021-10-08 13:55:20 +02:00
"top disk0/00/00/00/01 2010-01-06 13:43:48 2011-07-06 08:24:53 \n",
"freq 1 16 8 \n",
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" status_changed type succeeds commentary \\\n",
2022-02-14 13:34:42 +01:00
"count 5444 5444 108 0.0 \n",
"unique 4230 12 108 NaN \n",
2021-10-08 13:55:20 +02:00
"top 2010-01-06 13:43:48 institutional 10164 NaN \n",
2022-02-14 13:34:42 +01:00
"freq 16 3853 1 NaN \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN \n",
"\n",
" metadata_visibility latitude longitude relation_type relation_uri \\\n",
2022-02-14 13:34:42 +01:00
"count 5444 0.0 0.0 0.0 0.0 \n",
2021-10-08 13:55:20 +02:00
"unique 2 NaN NaN NaN NaN \n",
"top show NaN NaN NaN NaN \n",
2022-02-14 13:34:42 +01:00
"freq 5402 NaN NaN NaN NaN \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN NaN \n",
"\n",
" item_issues_id item_issues_type \\\n",
"count 63 63 \n",
"unique 48 5 \n",
"top bad_oai_pmh_url_0 duplicate_title \n",
"freq 15 33 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" item_issues_description \\\n",
"count 63 \n",
"unique 62 \n",
"top Duplicate title to <xhtml:table xmlns:xhtml=\"h... \n",
"freq 2 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" item_issues_timestamp item_issues_status item_issues_reported_by \\\n",
"count 63 63 0.0 \n",
"unique 4 3 NaN \n",
"top 2010-01-13 10:44:49 discovered NaN \n",
"freq 45 38 NaN \n",
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" item_issues_resolved_by item_issues_comment item_issues_count \\\n",
2022-02-14 13:34:42 +01:00
"count 0.0 0.0 2242 \n",
2021-10-08 13:55:20 +02:00
"unique NaN NaN 4 \n",
"top NaN NaN 0 \n",
2022-02-14 13:34:42 +01:00
"freq NaN NaN 2201 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" sword_depositor sword_slug exemplar home_page \\\n",
2022-02-14 13:34:42 +01:00
"count 0.0 0.0 268 5437 \n",
"unique NaN NaN 2 5271 \n",
2021-10-08 13:55:20 +02:00
"top NaN NaN FALSE http://eprints.upnjatim.ac.id/ \n",
2022-02-14 13:34:42 +01:00
"freq NaN NaN 261 4 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN \n",
"\n",
" title oai_pmh \\\n",
2022-02-14 13:34:42 +01:00
"count 5442 4332 \n",
"unique 5143 4059 \n",
2021-10-08 13:55:20 +02:00
"top Repositorio Institucional http://kce.docressources.info/ws/PMBWs_2 \n",
"freq 7 4 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" sword_endpoint \\\n",
2022-02-14 13:34:42 +01:00
"count 178 \n",
"unique 172 \n",
2021-10-08 13:55:20 +02:00
"top http://producao.usp.br/sword/servicedocument \n",
"freq 2 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" rss_feed \\\n",
2022-02-14 13:34:42 +01:00
"count 1538 \n",
"unique 1485 \n",
2021-10-08 13:55:20 +02:00
"top http://eprints.upnjatim.ac.id/cgi/latest_tool?... \n",
"freq 5 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" twitter_feed \\\n",
2022-02-14 13:34:42 +01:00
"count 116 \n",
"unique 112 \n",
2021-10-08 13:55:20 +02:00
"top http://my.indexcopernicus.com/fredemoreno \n",
"freq 2 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" description fulltext open_access mandate \\\n",
2022-02-14 13:34:42 +01:00
"count 3837 4197 4197 3746 \n",
"unique 3359 2 2 2 \n",
2021-10-08 13:55:20 +02:00
"top info:other:archives.eprints.org:import TRUE TRUE FALSE \n",
2022-02-14 13:34:42 +01:00
"freq 112 2805 2696 2748 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN \n",
"\n",
" organisation_title organisation_home_page \\\n",
2022-02-14 13:34:42 +01:00
"count 4460 4286 \n",
"unique 3858 3831 \n",
2021-10-08 13:55:20 +02:00
"top Chinese Academy of Science (中国科学院) http://www.cas.cn/ \n",
"freq 9 9 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" location_country location_city location_latitude location_longitude \\\n",
2022-02-14 13:34:42 +01:00
"count 5138 3714 3725 3708 \n",
"unique 144 1884 2923 2953 \n",
2021-10-08 13:55:20 +02:00
"top us Lima 34.1607 -118.139 \n",
2022-02-14 13:34:42 +01:00
"freq 891 74 25 25 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN \n",
"\n",
" software geoname version subjects date \\\n",
2022-02-14 13:34:42 +01:00
"count 4700 4730 5444 1289 5429 \n",
"unique 31 126 53 938 4898 \n",
2021-10-08 13:55:20 +02:00
"top dspace geoname_2_US other K1 2006-05-04 10:48:14 \n",
2022-02-14 13:34:42 +01:00
"freq 2341 845 4841 53 99 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN NaN \n",
"\n",
" note \\\n",
2022-02-14 13:34:42 +01:00
"count 218 \n",
"unique 210 \n",
"top ¿Quién puede depositar documentos en el reposi... \n",
2021-10-08 13:55:20 +02:00
"freq 2 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" suggestions activity_low \\\n",
2022-02-14 13:34:42 +01:00
"count 189 2288 \n",
"unique 173 72 \n",
2021-10-08 13:55:20 +02:00
"top This repository is hosted by the Texas Digital... 0 \n",
2022-02-14 13:34:42 +01:00
"freq 9 2012 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" activity_medium activity_high recordcount \\\n",
2022-02-14 13:34:42 +01:00
"count 2288 2288 2290 \n",
2021-10-08 13:55:20 +02:00
"unique 54 16 741 \n",
"top 0 0 100 \n",
2022-02-14 13:34:42 +01:00
"freq 2074 2210 730 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" recordhistory fulltexts_total \\\n",
2022-02-14 13:34:42 +01:00
"count 2288 270 \n",
"unique 1702 135 \n",
2021-10-08 13:55:20 +02:00
"top 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,... 0 \n",
"freq 95 113 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" fulltexts_docs fulltexts_rtotal fulltexts_rdocs registry_name \\\n",
2022-02-14 13:34:42 +01:00
"count 258 270 258 4605 \n",
"unique 118 134 117 7 \n",
2021-10-08 13:55:20 +02:00
"top 0 0 0 [opendoar, celestial] \n",
2022-02-14 13:34:42 +01:00
"freq 114 113 114 2106 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN NaN \n",
"std NaN NaN NaN NaN \n",
"min NaN NaN NaN NaN \n",
"25% NaN NaN NaN NaN \n",
"50% NaN NaN NaN NaN \n",
"75% NaN NaN NaN NaN \n",
"max NaN NaN NaN NaN \n",
"\n",
" registry_id submit_to submitted_to_name \\\n",
2022-02-14 13:34:42 +01:00
"count 4580 375 205 \n",
2022-03-17 10:33:11 +01:00
"unique 4261 7 1 \n",
"top 2479 [opendoar, roarmap, celestial] opendoar \n",
2022-02-14 13:34:42 +01:00
"freq 4 119 205 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" submitted_to_done webometrics_rank webometrics_size \\\n",
"count 205 148 148 \n",
"unique 1 148 148 \n",
"top 2021-01-25 24 46 \n",
"freq 205 1 1 \n",
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" webometrics_visibility webometrics_rich_files webometrics_scholar \\\n",
"count 148 148 148 \n",
"unique 148 146 143 \n",
"top 20 824 806 \n",
"freq 1 3 5 \n",
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" monthly_deposits total_deposits \\\n",
"count 756 756 \n",
"unique 346 342 \n",
"top 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,... 0 \n",
"freq 387 387 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" association \n",
2022-02-14 13:34:42 +01:00
"count 223 \n",
2021-10-08 13:55:20 +02:00
"unique 3 \n",
"top russell_group \n",
2022-02-14 13:34:42 +01:00
"freq 130 \n",
2021-10-08 13:55:20 +02:00
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN "
]
},
2022-03-17 10:33:11 +01:00
"execution_count": 8,
2021-10-08 13:55:20 +02:00
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"roar_df.describe(include='all')"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**FAIRsharing**"
]
},
{
"cell_type": "code",
2022-03-17 10:33:11 +01:00
"execution_count": 9,
2021-10-08 13:55:20 +02:00
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
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" .dataframe thead th {\n",
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"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>id</th>\n",
" <th>type</th>\n",
" <th>attributes.created-at</th>\n",
" <th>attributes.updated-at</th>\n",
" <th>attributes.metadata.doi</th>\n",
" <th>attributes.metadata.name</th>\n",
" <th>attributes.metadata.status</th>\n",
" <th>attributes.metadata.contacts</th>\n",
" <th>attributes.metadata.homepage</th>\n",
" <th>attributes.metadata.identifier</th>\n",
" <th>attributes.metadata.description</th>\n",
2022-03-17 10:33:11 +01:00
" <th>attributes.metadata.abbreviation</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.metadata.support-links</th>\n",
" <th>attributes.metadata.year-creation</th>\n",
" <th>attributes.metadata.data-processes</th>\n",
2022-03-17 10:33:11 +01:00
" <th>attributes.metadata.cross-references</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.legacy-ids</th>\n",
" <th>attributes.fairsharing-registry</th>\n",
" <th>attributes.record-type</th>\n",
" <th>attributes.subjects</th>\n",
" <th>attributes.domains</th>\n",
" <th>attributes.taxonomies</th>\n",
" <th>attributes.user-defined-tags</th>\n",
" <th>attributes.countries</th>\n",
" <th>attributes.name</th>\n",
" <th>attributes.abbreviation</th>\n",
" <th>attributes.url</th>\n",
" <th>attributes.doi</th>\n",
" <th>attributes.fairsharing-licence</th>\n",
" <th>attributes.description</th>\n",
" <th>attributes.publications</th>\n",
" <th>attributes.licence-links</th>\n",
2022-03-17 10:33:11 +01:00
" <th>attributes.url-for-logo</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.metadata.citations</th>\n",
" <th>attributes.metadata.associated-tools</th>\n",
" <th>attributes.metadata.deprecation-reason</th>\n",
2022-03-17 10:33:11 +01:00
" <th>attributes.metadata.data-access-condition.type</th>\n",
" <th>attributes.metadata.data-contact-information</th>\n",
" <th>attributes.metadata.data-deposition-condition.url</th>\n",
" <th>attributes.metadata.data-deposition-condition.type</th>\n",
" <th>attributes.metadata.deprecation-date</th>\n",
" <th>attributes.metadata.access-points</th>\n",
" <th>attributes.metadata.data-access-condition.url</th>\n",
" <th>attributes.metadata.resource-sustainability.url</th>\n",
" <th>attributes.metadata.resource-sustainability.name</th>\n",
" <th>attributes.metadata.data-preservation-policy.url</th>\n",
" <th>attributes.metadata.data-preservation-policy.name</th>\n",
" <th>attributes.metadata.data-access-for-pre-publication-review</th>\n",
" <th>attributes.metadata.data-versioning</th>\n",
" <th>attributes.metadata.data-curation.type</th>\n",
" <th>attributes.metadata.data-curation.url</th>\n",
" <th>attributes.metadata.citation-to-related-publications</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.metadata.tombstone</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
2022-03-17 10:33:11 +01:00
" <td>3226</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fairsharing-records</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2020-12-09T11:53:44.000Z</td>\n",
" <td>2022-02-08T10:42:36.452Z</td>\n",
" <td>10.25504/FAIRsharing.d6423b</td>\n",
" <td>WDC Sunspot Index and Long-term Solar Observat...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>ready</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'contact-name': 'Frédéric Clette', 'contact-...</td>\n",
" <td>http://sidc.be/silso/home</td>\n",
" <td>3226</td>\n",
" <td>The WDC-SILSO is an activity of the Operationa...</td>\n",
" <td>WDC-SILSO</td>\n",
" <td>[{'url': 'http://www.sidc.be/silso/taxonomy/te...</td>\n",
" <td>2013.0</td>\n",
" <td>[{'url': 'http://www.sidc.be/silso/datafiles',...</td>\n",
" <td>[{'url': 'https://www.re3data.org/repository/r...</td>\n",
" <td>[biodbcore-001740, bsg-d001740]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>Database</td>\n",
" <td>repository</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[Electromagnetism, Astrophysics and Astronomy,...</td>\n",
" <td>[Climate, Observation design]</td>\n",
" <td>[Not applicable]</td>\n",
" <td>[Climate change, earth observation, Electromag...</td>\n",
" <td>[Belgium]</td>\n",
" <td>FAIRsharing record for: WDC Sunspot Index and ...</td>\n",
" <td>WDC-SILSO</td>\n",
" <td>https://fairsharing.org/10.25504/FAIRsharing.d...</td>\n",
" <td>10.25504/FAIRsharing.d6423b</td>\n",
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
" <td>This FAIRsharing record describes: The WDC-SIL...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'licence-name': 'SILSO legal notices', 'lice...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>None</td>\n",
2022-03-17 10:33:11 +01:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
2022-03-17 10:33:11 +01:00
" <td>2114</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fairsharing-records</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2014-11-04T15:23:40.000Z</td>\n",
" <td>2022-01-21T14:39:02.195Z</td>\n",
" <td>10.25504/FAIRsharing.p06nme</td>\n",
" <td>Biological Magnetic Resonance Data Bank</td>\n",
2021-10-08 13:55:20 +02:00
" <td>ready</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'contact-name': 'Helpdesk', 'contact-email':...</td>\n",
" <td>https://bmrb.io/</td>\n",
" <td>2114</td>\n",
" <td>BMRB collects, annotates, archives, and dissem...</td>\n",
" <td>BMRB</td>\n",
" <td>[{'url': 'https://bmrb.io/bmrb/news/', 'name':...</td>\n",
" <td>1988.0</td>\n",
" <td>[{'url': 'https://bmrb.io/data_library/rsync.s...</td>\n",
" <td>[{'url': 'https://www.re3data.org/repository/r...</td>\n",
" <td>[biodbcore-000584, bsg-d000584]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>Database</td>\n",
" <td>repository</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[Structural Biology]</td>\n",
" <td>[Molecular structure, Protein structure, Pepti...</td>\n",
" <td>[All]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[]</td>\n",
" <td>[United States]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>FAIRsharing record for: Biological Magnetic Re...</td>\n",
" <td>BMRB</td>\n",
" <td>https://fairsharing.org/10.25504/FAIRsharing.p...</td>\n",
" <td>10.25504/FAIRsharing.p06nme</td>\n",
2021-10-08 13:55:20 +02:00
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>This FAIRsharing record describes: BMRB collec...</td>\n",
" <td>[{'id': 552, 'pubmed_id': 18288446, 'title': '...</td>\n",
" <td>[{'licence-name': 'wwPDB Privacy and Usage Pol...</td>\n",
" <td>None</td>\n",
" <td>[{'doi': '10.1093/nar/gkm957', 'pubmed-id': 17...</td>\n",
" <td>[{'url': 'https://bmrb.io/validate/', 'name': ...</td>\n",
" <td></td>\n",
" <td>open</td>\n",
" <td>yes</td>\n",
" <td>https://bmrb.io/deposit/</td>\n",
" <td>open</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
2022-03-17 10:33:11 +01:00
" <td>3022</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fairsharing-records</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2020-06-17T10:25:30.000Z</td>\n",
" <td>2022-02-08T10:41:04.073Z</td>\n",
" <td>10.25504/FAIRsharing.8b7a2f</td>\n",
" <td>Fisheries and Oceans Canada Pacific Region Dat...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>ready</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'contact-name': 'Peter Chandler', 'contact-e...</td>\n",
" <td>http://www.pac.dfo-mpo.gc.ca/science/oceans/da...</td>\n",
" <td>3022</td>\n",
" <td>The Institute of Ocean Sciences (IOS)/Ocean Sc...</td>\n",
" <td>None</td>\n",
" <td>[{'url': 'DFO.PAC.SCI.IOSData-DonneesISO.SCI.P...</td>\n",
" <td>NaN</td>\n",
" <td>[{'name': 'Users must contact the Senior Analy...</td>\n",
" <td>[{'url': 'https://www.re3data.org/repository/r...</td>\n",
" <td>[biodbcore-001530, bsg-d001530]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>Database</td>\n",
" <td>repository</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[Environmental Science, Meteorology, Earth Sci...</td>\n",
" <td>[Climate]</td>\n",
" <td>[Not applicable]</td>\n",
" <td>[Salinity, Temperature]</td>\n",
" <td>[Canada]</td>\n",
" <td>FAIRsharing record for: Fisheries and Oceans C...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>None</td>\n",
2022-03-17 10:33:11 +01:00
" <td>https://fairsharing.org/10.25504/FAIRsharing.8...</td>\n",
" <td>10.25504/FAIRsharing.8b7a2f</td>\n",
2021-10-08 13:55:20 +02:00
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>This FAIRsharing record describes: The Institu...</td>\n",
" <td>[]</td>\n",
" <td>[{'licence-name': 'Fisheries and Oceans Canada...</td>\n",
" <td>None</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
2022-03-17 10:33:11 +01:00
" <td>2998</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fairsharing-records</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2020-05-21T07:42:30.000Z</td>\n",
" <td>2022-02-08T10:40:19.531Z</td>\n",
" <td>10.25504/FAIRsharing.e08886</td>\n",
" <td>Climate Prediction Center</td>\n",
2021-10-08 13:55:20 +02:00
" <td>ready</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'contact-name': 'Jon Hoopingarner', 'contact...</td>\n",
" <td>https://www.cpc.ncep.noaa.gov/</td>\n",
" <td>2998</td>\n",
" <td>The Climate Prediction Center (CPC) produces o...</td>\n",
" <td>CPC</td>\n",
" <td>[{'url': 'https://www.cpc.ncep.noaa.gov/commen...</td>\n",
" <td>1970.0</td>\n",
" <td>[{'url': 'https://www.cpc.ncep.noaa.gov/', 'na...</td>\n",
" <td>[{'url': 'https://www.re3data.org/repository/r...</td>\n",
" <td>[biodbcore-001504, bsg-d001504]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>Database</td>\n",
" <td>repository</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[Hydrogeology, Geography, Meteorology, Geodesy...</td>\n",
" <td>[Climate]</td>\n",
" <td>[Not applicable]</td>\n",
" <td>[Forecasting, weather]</td>\n",
" <td>[United States]</td>\n",
" <td>FAIRsharing record for: Climate Prediction Center</td>\n",
" <td>CPC</td>\n",
" <td>https://fairsharing.org/10.25504/FAIRsharing.e...</td>\n",
" <td>10.25504/FAIRsharing.e08886</td>\n",
2021-10-08 13:55:20 +02:00
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>This FAIRsharing record describes: The Climate...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'licence-name': 'National Weather Service Di...</td>\n",
" <td>None</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
2022-03-17 10:33:11 +01:00
" <td>2301</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fairsharing-records</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2016-06-03T14:54:08.000Z</td>\n",
" <td>2021-11-24T13:17:51.201Z</td>\n",
" <td>10.25504/FAIRsharing.meh9wz</td>\n",
" <td>Acytostelium Gene Database</td>\n",
" <td>deprecated</td>\n",
" <td>[{'contact-name': 'Acytostelium genome consort...</td>\n",
" <td>http://cosmos.bot.kyoto-u.ac.jp/acytodb//cgi-b...</td>\n",
" <td>2301</td>\n",
" <td>Genome and transcriptome database of Acytostel...</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2008.0</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>[biodbcore-000775, bsg-d000775]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>Database</td>\n",
" <td>repository</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[Genomics, Life Science, Transcriptomics]</td>\n",
" <td>[DNA sequence data, Gene model annotation]</td>\n",
" <td>[Acytostelium subglobosum]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[United Kingdom, Japan]</td>\n",
" <td>FAIRsharing record for: Acytostelium Gene Data...</td>\n",
" <td>None</td>\n",
" <td>https://fairsharing.org/10.25504/FAIRsharing.m...</td>\n",
" <td>10.25504/FAIRsharing.meh9wz</td>\n",
2021-10-08 13:55:20 +02:00
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>This FAIRsharing record describes: Genome and ...</td>\n",
" <td>[{'id': 1139, 'pubmed_id': 25758444, 'title': ...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>None</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>This resource is no longer available at the st...</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2021-9-17</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" id type attributes.created-at \\\n",
2022-03-17 10:33:11 +01:00
"0 3226 fairsharing-records 2020-12-09T11:53:44.000Z \n",
"1 2114 fairsharing-records 2014-11-04T15:23:40.000Z \n",
"2 3022 fairsharing-records 2020-06-17T10:25:30.000Z \n",
"3 2998 fairsharing-records 2020-05-21T07:42:30.000Z \n",
"4 2301 fairsharing-records 2016-06-03T14:54:08.000Z \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.updated-at attributes.metadata.doi \\\n",
2022-03-17 10:33:11 +01:00
"0 2022-02-08T10:42:36.452Z 10.25504/FAIRsharing.d6423b \n",
"1 2022-01-21T14:39:02.195Z 10.25504/FAIRsharing.p06nme \n",
"2 2022-02-08T10:41:04.073Z 10.25504/FAIRsharing.8b7a2f \n",
"3 2022-02-08T10:40:19.531Z 10.25504/FAIRsharing.e08886 \n",
"4 2021-11-24T13:17:51.201Z 10.25504/FAIRsharing.meh9wz \n",
"\n",
" attributes.metadata.name \\\n",
"0 WDC Sunspot Index and Long-term Solar Observat... \n",
"1 Biological Magnetic Resonance Data Bank \n",
"2 Fisheries and Oceans Canada Pacific Region Dat... \n",
"3 Climate Prediction Center \n",
"4 Acytostelium Gene Database \n",
"\n",
" attributes.metadata.status \\\n",
"0 ready \n",
"1 ready \n",
"2 ready \n",
"3 ready \n",
"4 deprecated \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.contacts \\\n",
2022-03-17 10:33:11 +01:00
"0 [{'contact-name': 'Frédéric Clette', 'contact-... \n",
"1 [{'contact-name': 'Helpdesk', 'contact-email':... \n",
"2 [{'contact-name': 'Peter Chandler', 'contact-e... \n",
"3 [{'contact-name': 'Jon Hoopingarner', 'contact... \n",
"4 [{'contact-name': 'Acytostelium genome consort... \n",
"\n",
" attributes.metadata.homepage \\\n",
"0 http://sidc.be/silso/home \n",
"1 https://bmrb.io/ \n",
"2 http://www.pac.dfo-mpo.gc.ca/science/oceans/da... \n",
"3 https://www.cpc.ncep.noaa.gov/ \n",
"4 http://cosmos.bot.kyoto-u.ac.jp/acytodb//cgi-b... \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.identifier \\\n",
2022-03-17 10:33:11 +01:00
"0 3226 \n",
"1 2114 \n",
"2 3022 \n",
"3 2998 \n",
"4 2301 \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.description \\\n",
2022-03-17 10:33:11 +01:00
"0 The WDC-SILSO is an activity of the Operationa... \n",
"1 BMRB collects, annotates, archives, and dissem... \n",
"2 The Institute of Ocean Sciences (IOS)/Ocean Sc... \n",
"3 The Climate Prediction Center (CPC) produces o... \n",
"4 Genome and transcriptome database of Acytostel... \n",
"\n",
" attributes.metadata.abbreviation \\\n",
"0 WDC-SILSO \n",
"1 BMRB \n",
"2 None \n",
"3 CPC \n",
"4 NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.support-links \\\n",
2022-03-17 10:33:11 +01:00
"0 [{'url': 'http://www.sidc.be/silso/taxonomy/te... \n",
"1 [{'url': 'https://bmrb.io/bmrb/news/', 'name':... \n",
"2 [{'url': 'DFO.PAC.SCI.IOSData-DonneesISO.SCI.P... \n",
"3 [{'url': 'https://www.cpc.ncep.noaa.gov/commen... \n",
"4 NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.year-creation \\\n",
2022-03-17 10:33:11 +01:00
"0 2013.0 \n",
"1 1988.0 \n",
"2 NaN \n",
"3 1970.0 \n",
"4 2008.0 \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.data-processes \\\n",
2022-03-17 10:33:11 +01:00
"0 [{'url': 'http://www.sidc.be/silso/datafiles',... \n",
"1 [{'url': 'https://bmrb.io/data_library/rsync.s... \n",
"2 [{'name': 'Users must contact the Senior Analy... \n",
"3 [{'url': 'https://www.cpc.ncep.noaa.gov/', 'na... \n",
"4 NaN \n",
"\n",
" attributes.metadata.cross-references \\\n",
"0 [{'url': 'https://www.re3data.org/repository/r... \n",
"1 [{'url': 'https://www.re3data.org/repository/r... \n",
"2 [{'url': 'https://www.re3data.org/repository/r... \n",
"3 [{'url': 'https://www.re3data.org/repository/r... \n",
"4 NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.legacy-ids attributes.fairsharing-registry \\\n",
2022-03-17 10:33:11 +01:00
"0 [biodbcore-001740, bsg-d001740] Database \n",
"1 [biodbcore-000584, bsg-d000584] Database \n",
"2 [biodbcore-001530, bsg-d001530] Database \n",
"3 [biodbcore-001504, bsg-d001504] Database \n",
"4 [biodbcore-000775, bsg-d000775] Database \n",
"\n",
" attributes.record-type attributes.subjects \\\n",
"0 repository [Electromagnetism, Astrophysics and Astronomy,... \n",
"1 repository [Structural Biology] \n",
"2 repository [Environmental Science, Meteorology, Earth Sci... \n",
"3 repository [Hydrogeology, Geography, Meteorology, Geodesy... \n",
"4 repository [Genomics, Life Science, Transcriptomics] \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.domains \\\n",
2022-03-17 10:33:11 +01:00
"0 [Climate, Observation design] \n",
"1 [Molecular structure, Protein structure, Pepti... \n",
"2 [Climate] \n",
"3 [Climate] \n",
"4 [DNA sequence data, Gene model annotation] \n",
"\n",
" attributes.taxonomies \\\n",
"0 [Not applicable] \n",
"1 [All] \n",
"2 [Not applicable] \n",
"3 [Not applicable] \n",
"4 [Acytostelium subglobosum] \n",
"\n",
" attributes.user-defined-tags attributes.countries \\\n",
"0 [Climate change, earth observation, Electromag... [Belgium] \n",
"1 [] [United States] \n",
"2 [Salinity, Temperature] [Canada] \n",
"3 [Forecasting, weather] [United States] \n",
"4 [] [United Kingdom, Japan] \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.name attributes.abbreviation \\\n",
2022-03-17 10:33:11 +01:00
"0 FAIRsharing record for: WDC Sunspot Index and ... WDC-SILSO \n",
"1 FAIRsharing record for: Biological Magnetic Re... BMRB \n",
"2 FAIRsharing record for: Fisheries and Oceans C... None \n",
"3 FAIRsharing record for: Climate Prediction Center CPC \n",
"4 FAIRsharing record for: Acytostelium Gene Data... None \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.url \\\n",
2022-03-17 10:33:11 +01:00
"0 https://fairsharing.org/10.25504/FAIRsharing.d... \n",
"1 https://fairsharing.org/10.25504/FAIRsharing.p... \n",
"2 https://fairsharing.org/10.25504/FAIRsharing.8... \n",
"3 https://fairsharing.org/10.25504/FAIRsharing.e... \n",
"4 https://fairsharing.org/10.25504/FAIRsharing.m... \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.doi \\\n",
2022-03-17 10:33:11 +01:00
"0 10.25504/FAIRsharing.d6423b \n",
"1 10.25504/FAIRsharing.p06nme \n",
"2 10.25504/FAIRsharing.8b7a2f \n",
"3 10.25504/FAIRsharing.e08886 \n",
"4 10.25504/FAIRsharing.meh9wz \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.fairsharing-licence \\\n",
"0 https://creativecommons.org/licenses/by-sa/4.0... \n",
"1 https://creativecommons.org/licenses/by-sa/4.0... \n",
"2 https://creativecommons.org/licenses/by-sa/4.0... \n",
"3 https://creativecommons.org/licenses/by-sa/4.0... \n",
"4 https://creativecommons.org/licenses/by-sa/4.0... \n",
"\n",
" attributes.description \\\n",
2022-03-17 10:33:11 +01:00
"0 This FAIRsharing record describes: The WDC-SIL... \n",
"1 This FAIRsharing record describes: BMRB collec... \n",
"2 This FAIRsharing record describes: The Institu... \n",
"3 This FAIRsharing record describes: The Climate... \n",
"4 This FAIRsharing record describes: Genome and ... \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.publications \\\n",
2022-03-17 10:33:11 +01:00
"0 [] \n",
"1 [{'id': 552, 'pubmed_id': 18288446, 'title': '... \n",
"2 [] \n",
2021-10-08 13:55:20 +02:00
"3 [] \n",
2022-03-17 10:33:11 +01:00
"4 [{'id': 1139, 'pubmed_id': 25758444, 'title': ... \n",
2021-10-08 13:55:20 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.licence-links attributes.url-for-logo \\\n",
"0 [{'licence-name': 'SILSO legal notices', 'lice... None \n",
"1 [{'licence-name': 'wwPDB Privacy and Usage Pol... None \n",
"2 [{'licence-name': 'Fisheries and Oceans Canada... None \n",
"3 [{'licence-name': 'National Weather Service Di... None \n",
"4 [] None \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.citations \\\n",
"0 NaN \n",
2022-03-17 10:33:11 +01:00
"1 [{'doi': '10.1093/nar/gkm957', 'pubmed-id': 17... \n",
"2 NaN \n",
2021-10-08 13:55:20 +02:00
"3 NaN \n",
"4 NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.associated-tools \\\n",
2021-10-08 13:55:20 +02:00
"0 NaN \n",
2022-03-17 10:33:11 +01:00
"1 [{'url': 'https://bmrb.io/validate/', 'name': ... \n",
"2 NaN \n",
2021-10-08 13:55:20 +02:00
"3 NaN \n",
"4 NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.deprecation-reason \\\n",
"0 NaN \n",
"1 \n",
"2 NaN \n",
"3 NaN \n",
"4 This resource is no longer available at the st... \n",
"\n",
" attributes.metadata.data-access-condition.type \\\n",
"0 NaN \n",
"1 open \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-contact-information \\\n",
"0 NaN \n",
"1 yes \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-deposition-condition.url \\\n",
"0 NaN \n",
"1 https://bmrb.io/deposit/ \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-deposition-condition.type \\\n",
2021-10-08 13:55:20 +02:00
"0 NaN \n",
2022-03-17 10:33:11 +01:00
"1 open \n",
"2 NaN \n",
2021-10-08 13:55:20 +02:00
"3 NaN \n",
"4 NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.deprecation-date attributes.metadata.access-points \\\n",
"0 NaN NaN \n",
"1 NaN NaN \n",
"2 NaN NaN \n",
"3 NaN NaN \n",
"4 2021-9-17 NaN \n",
"\n",
" attributes.metadata.data-access-condition.url \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.resource-sustainability.url \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.resource-sustainability.name \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-preservation-policy.url \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-preservation-policy.name \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-access-for-pre-publication-review \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.data-versioning attributes.metadata.data-curation.type \\\n",
"0 NaN NaN \n",
"1 NaN NaN \n",
"2 NaN NaN \n",
"3 NaN NaN \n",
"4 NaN NaN \n",
"\n",
" attributes.metadata.data-curation.url \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
"\n",
" attributes.metadata.citation-to-related-publications \\\n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.tombstone \n",
"0 NaN \n",
"1 NaN \n",
"2 NaN \n",
"3 NaN \n",
"4 NaN "
]
},
2022-03-17 10:33:11 +01:00
"execution_count": 9,
2021-10-08 13:55:20 +02:00
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
2022-03-17 10:33:11 +01:00
"with open('../data/raw/fairsharing_dump_api_02_2022.json') as f:\n",
2021-10-08 13:55:20 +02:00
" lines = f.read().splitlines()\n",
" \n",
"fairsharing_df = pd.DataFrame(lines)\n",
"fairsharing_df.columns = ['json_element']\n",
"fairsharing_df['json_element'].apply(json.loads)\n",
"fairsharing_df = pd.json_normalize(fairsharing_df['json_element'].apply(json.loads))\n",
"\n",
"fairsharing_df.head()"
]
},
{
"cell_type": "code",
2022-03-17 10:33:11 +01:00
"execution_count": 10,
2021-10-08 13:55:20 +02:00
"metadata": {},
"outputs": [
{
"data": {
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" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>id</th>\n",
" <th>type</th>\n",
" <th>attributes.created-at</th>\n",
" <th>attributes.updated-at</th>\n",
" <th>attributes.metadata.doi</th>\n",
" <th>attributes.metadata.name</th>\n",
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2022-03-17 10:33:11 +01:00
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2021-10-08 13:55:20 +02:00
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2022-03-17 10:33:11 +01:00
" <th>attributes.metadata.cross-references</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.legacy-ids</th>\n",
" <th>attributes.fairsharing-registry</th>\n",
" <th>attributes.record-type</th>\n",
" <th>attributes.subjects</th>\n",
" <th>attributes.domains</th>\n",
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" <th>attributes.fairsharing-licence</th>\n",
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" <th>attributes.publications</th>\n",
" <th>attributes.licence-links</th>\n",
2022-03-17 10:33:11 +01:00
" <th>attributes.url-for-logo</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.metadata.citations</th>\n",
" <th>attributes.metadata.associated-tools</th>\n",
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2022-03-17 10:33:11 +01:00
" <th>attributes.metadata.data-access-condition.type</th>\n",
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" <th>attributes.metadata.resource-sustainability.url</th>\n",
" <th>attributes.metadata.resource-sustainability.name</th>\n",
" <th>attributes.metadata.data-preservation-policy.url</th>\n",
" <th>attributes.metadata.data-preservation-policy.name</th>\n",
" <th>attributes.metadata.data-access-for-pre-publication-review</th>\n",
" <th>attributes.metadata.data-versioning</th>\n",
" <th>attributes.metadata.data-curation.type</th>\n",
" <th>attributes.metadata.data-curation.url</th>\n",
" <th>attributes.metadata.citation-to-related-publications</th>\n",
2021-10-08 13:55:20 +02:00
" <th>attributes.metadata.tombstone</th>\n",
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" <tr>\n",
" <th>count</th>\n",
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" <td>1853</td>\n",
" <td>1853</td>\n",
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" <td>1853</td>\n",
" <td>1671</td>\n",
" <td>1663</td>\n",
" <td>1541.000000</td>\n",
" <td>1626</td>\n",
" <td>790</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1671</td>\n",
" <td>1853</td>\n",
" <td>1601</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>1853</td>\n",
" <td>18</td>\n",
" <td>621</td>\n",
" <td>632</td>\n",
" <td>363</td>\n",
" <td>42</td>\n",
" <td>47</td>\n",
" <td>22</td>\n",
" <td>33</td>\n",
" <td>238</td>\n",
" <td>465</td>\n",
" <td>19</td>\n",
" <td>2</td>\n",
" <td>2</td>\n",
" <td>3</td>\n",
" <td>3</td>\n",
" <td>10</td>\n",
" <td>17</td>\n",
" <td>22</td>\n",
" <td>8</td>\n",
" <td>35</td>\n",
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" <td>1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>unique</th>\n",
2022-03-17 10:33:11 +01:00
" <td>1853</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1218</td>\n",
" <td>1853</td>\n",
" <td>1601</td>\n",
" <td>1851</td>\n",
2021-10-08 13:55:20 +02:00
" <td>4</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1623</td>\n",
" <td>1853</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1853</td>\n",
" <td>1655</td>\n",
" <td>1646</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1625</td>\n",
" <td>790</td>\n",
" <td>1799</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
" <td>3</td>\n",
2022-03-17 10:33:11 +01:00
" <td>935</td>\n",
" <td>1205</td>\n",
" <td>385</td>\n",
" <td>395</td>\n",
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" <td>1851</td>\n",
" <td>1655</td>\n",
" <td>1853</td>\n",
" <td>1601</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1853</td>\n",
" <td>1135</td>\n",
" <td>1119</td>\n",
" <td>18</td>\n",
" <td>331</td>\n",
" <td>627</td>\n",
" <td>104</td>\n",
" <td>2</td>\n",
" <td>2</td>\n",
" <td>22</td>\n",
" <td>2</td>\n",
" <td>71</td>\n",
" <td>460</td>\n",
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" <td>8</td>\n",
" <td>2</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>top</th>\n",
2022-03-17 10:33:11 +01:00
" <td>3226</td>\n",
2021-10-08 13:55:20 +02:00
" <td>fairsharing-records</td>\n",
" <td>2014-11-04T15:23:40.000Z</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2022-02-08T10:42:36.452Z</td>\n",
" <td>10.25504/FAIRsharing.d6423b</td>\n",
" <td>iDog</td>\n",
2021-10-08 13:55:20 +02:00
" <td>ready</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[]</td>\n",
" <td>http://sidc.be/silso/home</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>The WDC-SILSO is an activity of the Operationa...</td>\n",
" <td>CGD</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[{'url': 'https://github.com/gbif/ipt/wiki/IPT...</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'url': 'https://site.uit.no/dataverseno/abou...</td>\n",
" <td>[{'url': 'https://www.re3data.org/repository/r...</td>\n",
" <td>[]</td>\n",
2021-10-08 13:55:20 +02:00
" <td>Database</td>\n",
" <td>repository</td>\n",
" <td>[Life Science]</td>\n",
" <td>[]</td>\n",
" <td>[All]</td>\n",
" <td>[]</td>\n",
" <td>[United States]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>FAIRsharing record for: iDog</td>\n",
2021-10-08 13:55:20 +02:00
" <td>CGD</td>\n",
2022-03-17 10:33:11 +01:00
" <td>https://fairsharing.org/10.25504/FAIRsharing.d...</td>\n",
" <td>10.25504/FAIRsharing.d6423b</td>\n",
2021-10-08 13:55:20 +02:00
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>This FAIRsharing record describes: The WDC-SIL...</td>\n",
2021-10-08 13:55:20 +02:00
" <td>[]</td>\n",
" <td>[]</td>\n",
2022-03-17 10:33:11 +01:00
" <td>/rails/active_storage/blobs/redirect/eyJfcmFpb...</td>\n",
" <td>[]</td>\n",
" <td>[]</td>\n",
" <td></td>\n",
" <td>open</td>\n",
" <td>yes</td>\n",
" <td>https://bmrb.io/deposit/</td>\n",
" <td>controlled</td>\n",
2021-10-08 13:55:20 +02:00
" <td>2021-9-17</td>\n",
2022-03-17 10:33:11 +01:00
" <td>[{'url': 'https://heidata.uni-heidelberg.de/oa...</td>\n",
" <td>https://arch.library.northwestern.edu/about?lo...</td>\n",
" <td>https://www.library.northwestern.edu/about/adm...</td>\n",
" <td>Commitment to Sustainability: Level 1</td>\n",
" <td>http://www.library.northwestern.edu/about/admi...</td>\n",
" <td>Digital Preservation Policy: Level 1</td>\n",
" <td>yes</td>\n",
" <td>yes</td>\n",
" <td>manual</td>\n",
" <td>https://www.gbif.org/tools/data-validator/about</td>\n",
" <td>yes</td>\n",
2021-10-08 13:55:20 +02:00
" <td>True</td>\n",
" </tr>\n",
" <tr>\n",
" <th>freq</th>\n",
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1853</td>\n",
2021-10-08 13:55:20 +02:00
" <td>636</td>\n",
" <td>1</td>\n",
" <td>1</td>\n",
" <td>2</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1564</td>\n",
" <td>40</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
" <td>NaN</td>\n",
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>3</td>\n",
2021-10-08 13:55:20 +02:00
" <td>6</td>\n",
" <td>NaN</td>\n",
" <td>2</td>\n",
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>55</td>\n",
" <td>1853</td>\n",
" <td>954</td>\n",
" <td>345</td>\n",
" <td>276</td>\n",
" <td>528</td>\n",
" <td>1258</td>\n",
" <td>607</td>\n",
2021-10-08 13:55:20 +02:00
" <td>2</td>\n",
" <td>3</td>\n",
" <td>1</td>\n",
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1853</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
2022-03-17 10:33:11 +01:00
" <td>690</td>\n",
" <td>735</td>\n",
" <td>1</td>\n",
" <td>285</td>\n",
2021-10-08 13:55:20 +02:00
" <td>3</td>\n",
2022-03-17 10:33:11 +01:00
" <td>125</td>\n",
" <td>38</td>\n",
" <td>45</td>\n",
" <td>1</td>\n",
" <td>21</td>\n",
" <td>81</td>\n",
2021-10-08 13:55:20 +02:00
" <td>3</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1</td>\n",
" <td>1</td>\n",
" <td>1</td>\n",
" <td>1</td>\n",
" <td>1</td>\n",
" <td>9</td>\n",
" <td>16</td>\n",
" <td>11</td>\n",
" <td>1</td>\n",
" <td>34</td>\n",
2021-10-08 13:55:20 +02:00
" <td>1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>mean</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2481.862925</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2007.894873</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" </tr>\n",
" <tr>\n",
" <th>std</th>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>554.072492</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>10.933713</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" </tr>\n",
" <tr>\n",
" <th>min</th>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1120.000000</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>1894.000000</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" </tr>\n",
" <tr>\n",
" <th>25%</th>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2009.000000</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>2004.000000</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" </tr>\n",
" <tr>\n",
" <th>50%</th>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2473.000000</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2010.000000</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>75%</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2938.000000</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2015.000000</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>max</th>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>3827.000000</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>2022.000000</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 13:55:20 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" id type attributes.created-at \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 1853 1853 \n",
"unique 1853 1 1218 \n",
"top 3226 fairsharing-records 2014-11-04T15:23:40.000Z \n",
"freq 1 1853 636 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" attributes.updated-at attributes.metadata.doi \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 1601 \n",
"unique 1853 1601 \n",
"top 2022-02-08T10:42:36.452Z 10.25504/FAIRsharing.d6423b \n",
2021-10-08 13:55:20 +02:00
"freq 1 1 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" attributes.metadata.name attributes.metadata.status \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 1853 \n",
"unique 1851 4 \n",
"top iDog ready \n",
"freq 2 1564 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.contacts attributes.metadata.homepage \\\n",
"count 1764 1853 \n",
"unique 1623 1853 \n",
"top [] http://sidc.be/silso/home \n",
"freq 40 1 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" attributes.metadata.identifier \\\n",
"count 1853.000000 \n",
"unique NaN \n",
"top NaN \n",
"freq NaN \n",
"mean 2481.862925 \n",
"std 554.072492 \n",
"min 1120.000000 \n",
"25% 2009.000000 \n",
"50% 2473.000000 \n",
"75% 2938.000000 \n",
"max 3827.000000 \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.description \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 \n",
"unique 1853 \n",
"top The WDC-SILSO is an activity of the Operationa... \n",
2021-10-08 13:55:20 +02:00
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.abbreviation \\\n",
"count 1671 \n",
"unique 1655 \n",
"top CGD \n",
"freq 3 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2021-10-08 13:55:20 +02:00
" attributes.metadata.support-links \\\n",
2022-03-17 10:33:11 +01:00
"count 1663 \n",
"unique 1646 \n",
2021-10-08 13:55:20 +02:00
"top [{'url': 'https://github.com/gbif/ipt/wiki/IPT... \n",
"freq 6 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.year-creation \\\n",
2022-03-17 10:33:11 +01:00
"count 1541.000000 \n",
2021-10-08 13:55:20 +02:00
"unique NaN \n",
"top NaN \n",
"freq NaN \n",
2022-03-17 10:33:11 +01:00
"mean 2007.894873 \n",
"std 10.933713 \n",
2021-10-08 13:55:20 +02:00
"min 1894.000000 \n",
"25% 2004.000000 \n",
"50% 2010.000000 \n",
2022-03-17 10:33:11 +01:00
"75% 2015.000000 \n",
"max 2022.000000 \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.data-processes \\\n",
2022-03-17 10:33:11 +01:00
"count 1626 \n",
"unique 1625 \n",
"top [{'url': 'https://site.uit.no/dataverseno/abou... \n",
2021-10-08 13:55:20 +02:00
"freq 2 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.cross-references \\\n",
"count 790 \n",
"unique 790 \n",
"top [{'url': 'https://www.re3data.org/repository/r... \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.legacy-ids attributes.fairsharing-registry \\\n",
"count 1853 1853 \n",
"unique 1799 1 \n",
"top [] Database \n",
"freq 55 1853 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.record-type attributes.subjects attributes.domains \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 1853 1853 \n",
"unique 3 935 1205 \n",
2021-10-08 13:55:20 +02:00
"top repository [Life Science] [] \n",
2022-03-17 10:33:11 +01:00
"freq 954 345 276 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN NaN \n",
"std NaN NaN NaN \n",
"min NaN NaN NaN \n",
"25% NaN NaN NaN \n",
"50% NaN NaN NaN \n",
"75% NaN NaN NaN \n",
"max NaN NaN NaN \n",
"\n",
" attributes.taxonomies attributes.user-defined-tags \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 1853 \n",
"unique 385 395 \n",
2021-10-08 13:55:20 +02:00
"top [All] [] \n",
2022-03-17 10:33:11 +01:00
"freq 528 1258 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.countries attributes.name \\\n",
"count 1853 1853 \n",
"unique 194 1851 \n",
"top [United States] FAIRsharing record for: iDog \n",
"freq 607 2 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.abbreviation \\\n",
2022-03-17 10:33:11 +01:00
"count 1671 \n",
"unique 1655 \n",
2021-10-08 13:55:20 +02:00
"top CGD \n",
"freq 3 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.url \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 \n",
"unique 1853 \n",
"top https://fairsharing.org/10.25504/FAIRsharing.d... \n",
2021-10-08 13:55:20 +02:00
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.doi \\\n",
2022-03-17 10:33:11 +01:00
"count 1601 \n",
"unique 1601 \n",
"top 10.25504/FAIRsharing.d6423b \n",
2021-10-08 13:55:20 +02:00
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.fairsharing-licence \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 \n",
2021-10-08 13:55:20 +02:00
"unique 1 \n",
"top https://creativecommons.org/licenses/by-sa/4.0... \n",
2022-03-17 10:33:11 +01:00
"freq 1853 \n",
2021-10-08 13:55:20 +02:00
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.description \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 \n",
"unique 1853 \n",
"top This FAIRsharing record describes: The WDC-SIL... \n",
2021-10-08 13:55:20 +02:00
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.publications attributes.licence-links \\\n",
2022-03-17 10:33:11 +01:00
"count 1853 1853 \n",
"unique 1135 1119 \n",
2021-10-08 13:55:20 +02:00
"top [] [] \n",
2022-03-17 10:33:11 +01:00
"freq 690 735 \n",
2021-10-08 13:55:20 +02:00
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.url-for-logo \\\n",
"count 18 \n",
"unique 18 \n",
"top /rails/active_storage/blobs/redirect/eyJfcmFpb... \n",
"freq 1 \n",
2021-10-08 13:55:20 +02:00
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.citations attributes.metadata.associated-tools \\\n",
"count 621 632 \n",
"unique 331 627 \n",
"top [] [] \n",
"freq 285 3 \n",
"mean NaN NaN \n",
"std NaN NaN \n",
"min NaN NaN \n",
"25% NaN NaN \n",
"50% NaN NaN \n",
"75% NaN NaN \n",
"max NaN NaN \n",
"\n",
" attributes.metadata.deprecation-reason \\\n",
"count 363 \n",
"unique 104 \n",
"top \n",
"freq 125 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-access-condition.type \\\n",
"count 42 \n",
"unique 2 \n",
"top open \n",
"freq 38 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-contact-information \\\n",
"count 47 \n",
"unique 2 \n",
"top yes \n",
"freq 45 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-deposition-condition.url \\\n",
"count 22 \n",
"unique 22 \n",
"top https://bmrb.io/deposit/ \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-deposition-condition.type \\\n",
"count 33 \n",
"unique 2 \n",
"top controlled \n",
"freq 21 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.deprecation-date \\\n",
"count 238 \n",
"unique 71 \n",
"top 2021-9-17 \n",
"freq 81 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
" attributes.metadata.access-points \\\n",
2022-03-17 10:33:11 +01:00
"count 465 \n",
"unique 460 \n",
"top [{'url': 'https://heidata.uni-heidelberg.de/oa... \n",
2021-10-08 13:55:20 +02:00
"freq 3 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.data-access-condition.url \\\n",
"count 19 \n",
"unique 19 \n",
"top https://arch.library.northwestern.edu/about?lo... \n",
"freq 1 \n",
2021-10-08 13:55:20 +02:00
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.resource-sustainability.url \\\n",
"count 2 \n",
"unique 2 \n",
"top https://www.library.northwestern.edu/about/adm... \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
2021-10-08 13:55:20 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.resource-sustainability.name \\\n",
"count 2 \n",
"unique 2 \n",
"top Commitment to Sustainability: Level 1 \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-preservation-policy.url \\\n",
"count 3 \n",
"unique 3 \n",
"top http://www.library.northwestern.edu/about/admi... \n",
"freq 1 \n",
2021-10-08 13:55:20 +02:00
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.data-preservation-policy.name \\\n",
"count 3 \n",
"unique 3 \n",
"top Digital Preservation Policy: Level 1 \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-access-for-pre-publication-review \\\n",
"count 10 \n",
"unique 2 \n",
"top yes \n",
"freq 9 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-versioning \\\n",
"count 17 \n",
"unique 2 \n",
"top yes \n",
"freq 16 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-curation.type \\\n",
"count 22 \n",
"unique 4 \n",
"top manual \n",
"freq 11 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.data-curation.url \\\n",
"count 8 \n",
"unique 8 \n",
"top https://www.gbif.org/tools/data-validator/about \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
" attributes.metadata.citation-to-related-publications \\\n",
"count 35 \n",
"unique 2 \n",
"top yes \n",
"freq 34 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN \n",
"\n",
2021-10-08 13:55:20 +02:00
" attributes.metadata.tombstone \n",
"count 1 \n",
"unique 1 \n",
"top True \n",
"freq 1 \n",
"mean NaN \n",
"std NaN \n",
"min NaN \n",
"25% NaN \n",
"50% NaN \n",
"75% NaN \n",
"max NaN "
]
},
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"execution_count": 10,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"fairsharing_df.describe(include='all')"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Subjects analysis"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**re3data**"
]
},
{
"cell_type": "code",
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"execution_count": 11,
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"metadata": {},
"outputs": [
{
"data": {
"text/html": [
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"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>orgIdentifier</th>\n",
" <th>subject</th>\n",
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" <tr>\n",
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" <th>2791</th>\n",
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" <th>2792</th>\n",
" <td>r3d100013735</td>\n",
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" </tr>\n",
" <tr>\n",
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" <th>2792</th>\n",
" <td>r3d100013735</td>\n",
" <td>204 Microbiology, Virology and Immunology</td>\n",
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" </tr>\n",
" <tr>\n",
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" <th>2792</th>\n",
" <td>r3d100013735</td>\n",
" <td>21 Biology</td>\n",
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" </tr>\n",
" <tr>\n",
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" <th>2792</th>\n",
" <td>r3d100013735</td>\n",
" <td>22 Medicine</td>\n",
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" </tr>\n",
" </tbody>\n",
"</table>\n",
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"<p>17032 rows ×
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"</div>"
],
"text/plain": [
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" orgIdentifier subject\n",
"0 r3d100000001 1 Humanities and Social Sciences\n",
"0 r3d100000001 111 Social Sciences\n",
"0 r3d100000001 11104 Political Science\n",
"0 r3d100000001 112 Economics\n",
"0 r3d100000001 12 Social and Behavioural Sciences\n",
"... ... ...\n",
"2791 r3d100013733 4 Engineering Sciences\n",
"2792 r3d100013735 2 Life Sciences\n",
"2792 r3d100013735 204 Microbiology, Virology and Immunology\n",
"2792 r3d100013735 21 Biology\n",
"2792 r3d100013735 22 Medicine\n",
"\n",
"[17032 rows x 2 columns]"
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]
},
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"execution_count": 11,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"re3data_subjects = re3data_df[['orgIdentifier', 'subject']].explode('subject')\n",
"re3data_subjects['subject'] = re3data_subjects['subject'].apply(lambda x: x['name'] if x is not np.nan else np.nan)\n",
"re3data_subjects"
]
},
{
"cell_type": "code",
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"execution_count": 12,
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"metadata": {},
"outputs": [
{
"data": {
"text/html": [
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2022-03-17 10:33:11 +01:00
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2021-10-08 13:55:20 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 13:55:20 +02:00
"/*!\n",
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2022-02-14 13:34:42 +01:00
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"/*\n",
" * @copyright 2016 Sean Connelly (@voidqk), http://syntheti.cc\n",
" * @license MIT\n",
" * @preserve Project Home: https://github.com/voidqk/polybooljs\n",
" */\n",
2022-03-17 10:33:11 +01:00
"var n,i=t(\"./lib/build-log\"),a=t(\"./lib/epsilon\"),o=t(\"./lib/intersecter\"),s=t(\"./lib/segment-chainer\"),l=t(\"./lib/segment-selector\"),c=t(\"./lib/geojson\"),u=!1,f=a();function h(t,e,r){var i=n.segments(t),a=n.segments(e),o=r(n.combine(i,a));return n.polygon(o)}n={buildLog:function(t){return!0===t?u=i():!1===t&&(u=!1),!1!==u&&u.list},epsilon:function(t){return f.epsilon(t)},segments:function(t){var e=o(!0,f,u);return t.regions.forEach(e.addRegion),{segments:e.calculate(t.inverted),inverted:t.inverted}},combine:function(t,e){return{combined:o(!1,f,u).calculate(t.segments,t.inverted,e.segments,e.inverted),inverted1:t.inverted,inverted2:e.inverted}},selectUnion:function(t){return{segments:l.union(t.combined,u),inverted:t.inverted1||t.inverted2}},selectIntersect:function(t){return{segments:l.intersect(t.combined,u),inverted:t.inverted1&&t.inverted2}},selectDifference:function(t){return{segments:l.difference(t.combined,u),inverted:t.inverted1&&!t.inverted2}},selectDifferenceRev:function(t){return{segments:l.differenceRev(t.combined,u),inverted:!t.inverted1&&t.inverted2}},selectXor:function(t){return{segments:l.xor(t.combined,u),inverted:t.inverted1!==t.inverted2}},polygon:function(t){return{regions:s(t.segments,f,u),inverted:t.inverted}},polygonFromGeoJSON:function(t){return c.toPolygon(n,t)},polygonToGeoJSON:function(t){return c.fromPolygon(n,f,t)},union:function(t,e){return h(t,e,n.selectUnion)},intersect:function(t,e){return h(t,e,n.selectIntersect)},difference:function(t,e){return h(t,e,n.selectDifference)},differenceRev:function(t,e){return h(t,e,n.selectDifferenceRev)},xor:function(t,e){return h(t,e,n.selectXor)}},\"object\"==typeof window&&(window.PolyBool=n),e.exports=n},{\"./lib/build-log\":255,\"./lib/epsilon\":256,\"./lib/geojson\":257,\"./lib/intersecter\":258,\"./lib/segment-chainer\":260,\"./lib/segment-selector\":261}],255:[function(t,e,r){e.exports=function(){var t,e=0,r=!1;function n(e,r){return t.list.push({type:e,data:r?JSON.parse(JSON.stringify(r)):void 0}),t}return t={list:[],segmentId:function(){return e++},checkIntersection:function(t,e){return n(\"check\",{seg1:t,seg2:e})},segmentChop:function(t,e){return n(\"div_seg\",{seg:t,pt:e}),n(\"chop\",{seg:t,pt:e})},statusRemove:function(t){return n(\"pop_seg\",{seg:t})},segmentUpdate:function(t){return n(\"seg_update\",{seg:t})},segmentNew:function(t,e){return n(\"new_seg\",{seg:t,primary:e})},segmentRemove:function(t){return n(\"rem_seg\",{seg:t})},tempStatus:function(t,e,r){return n(\"temp_status\",{seg:t,above:e,below:r})},rewind:function(t){return n(\"rewind\",{seg:t})},status:function(t,e,r){return n(\"status\",{seg:t,above:e,below:r})},vert:function(e){return e===r?t:(r=e,n(\"vert\",{x:e}))},log:function(t){return\"string\"!=typeof t&&(t=JSON.stringify(t,!1,\" \")),n(\"log\",{txt:t})},reset:function(){return n(\"reset\")},selected:function(t){return n(\"selected\",{segs:t})},chainStart:function(t){return n(\"chain_start\",{seg:t})},chainRemoveHead:function(t,e){return n(\"chain_rem_head\",{index:t,pt:e})},chainRemoveTail:function(t,e){return n(\"chain_rem_tail\",{index:t,pt:e})},chainNew:function(t,e){return n(\"chain_new\",{pt1:t,pt2:e})},chainMatch:function(t){return n(\"chain_match\",{index:t})},chainClose:function(t){return n(\"chain_close\",{index:t})},chainAddHead:function(t,e){return n(\"chain_add_head\",{index:t,pt:e})},chainAddTail:function(t,e){return n(\"chain_add_tail\",{index:t,pt:e})},chainConnect:function(t,e){return n(\"chain_con\",{index1:t,index2:e})},chainReverse:function(t){return n(\"chain_rev\",{index:t})},chainJoin:function(t,e){return n(\"chain_join\",{index1:t,index2:e})},done:function(){return n(\"done\")}}}},{}],256:[function(t,e,r){e.exports=function(t){\"number\"!=typeof t&&(t=1e-10);var e={epsilon:function(e){return\"number\"==typeof e&&(t=e),t},pointAboveOrOnLine:function(e,r,n){var i=r[0],a=r[1],o=n[0],s=n[1],l=e[0];return(o-i)*(e[1]-a)-(s-a)*(l-i)>=-t},pointBetween:function(e,r,n){var i=e[1]-r[1],a=n[0]-r[0],o=e[0]-r[0],s=n[1]-r[1],l=o*a+i*s;return!(l<t)&&!(l-(a*a+s*s)>-t)},pointsSameX:function(e,r){r
2021-10-08 13:55:20 +02:00
"/*!\n",
2022-02-14 13:34:42 +01:00
" * The buffer module from node.js, for the browser.\n",
" *\n",
" * @author Feross Aboukhadijeh <https://feross.org>\n",
" * @license MIT\n",
2021-10-08 13:55:20 +02:00
" */\n",
2022-02-14 13:34:42 +01:00
"\"use strict\";var e=t(\"base64-js\"),n=t(\"ieee754\");r.Buffer=a,r.SlowBuffer=function(t){+t!=t&&(t=0);return a.alloc(+t)},r.INSPECT_MAX_BYTES=50;function i(t){if(t>2147483647)throw new RangeError('The value \"'+t+'\" is invalid for option \"size\"');var e=new Uint8Array(t);return e.__proto__=a.prototype,e}function a(t,e,r){if(\"number\"==typeof t){if(\"string\"==typeof e)throw new TypeError('The \"string\" argument must be of type string. Received type number');return l(t)}return o(t,e,r)}function o(t,e,r){if(\"string\"==typeof t)return function(t,e){\"string\"==typeof e&&\"\"!==e||(e=\"utf8\");if(!a.isEncoding(e))throw new TypeError(\"Unknown encoding: \"+e);var r=0|f(t,e),n=i(r),o=n.write(t,e);o!==r&&(n=n.slice(0,o));return n}(t,e);if(ArrayBuffer.isView(t))return c(t);if(null==t)throw TypeError(\"The first argument must be one of type string, Buffer, ArrayBuffer, Array, or Array-like Object. Received type \"+typeof t);if(B(t,ArrayBuffer)||t&&B(t.buffer,ArrayBuffer))return function(t,e,r){if(e<0||t.byteLength<e)throw new RangeError('\"offset\" is outside of buffer bounds');if(t.byteLength<e+(r||0))throw new RangeError('\"length\" is outside of buffer bounds');var n;n=void 0===e&&void 0===r?new Uint8Array(t):void 0===r?new Uint8Array(t,e):new Uint8Array(t,e,r);return n.__proto__=a.prototype,n}(t,e,r);if(\"number\"==typeof t)throw new TypeError('The \"value\" argument must not be of type number. Received type number');var n=t.valueOf&&t.valueOf();if(null!=n&&n!==t)return a.from(n,e,r);var o=function(t){if(a.isBuffer(t)){var e=0|u(t.length),r=i(e);return 0===r.length||t.copy(r,0,0,e),r}if(void 0!==t.length)return\"number\"!=typeof t.length||N(t.length)?i(0):c(t);if(\"Buffer\"===t.type&&Array.isArray(t.data))return c(t.data)}(t);if(o)return o;if(\"undefined\"!=typeof Symbol&&null!=Symbol.toPrimitive&&\"function\"==typeof t[Symbol.toPrimitive])return a.from(t[Symbol.toPrimitive](\"string\"),e,r);throw new TypeError(\"The first argument must be one of type string, Buffer, ArrayBuffer, Array, or Array-like Object. Received type \"+typeof t)}function s(t){if(\"number\"!=typeof t)throw new TypeError('\"size\" argument must be of type number');if(t<0)throw new RangeError('The value \"'+t+'\" is invalid for option \"size\"')}function l(t){return s(t),i(t<0?0:0|u(t))}function c(t){for(var e=t.length<0?0:0|u(t.length),r=i(e),n=0;n<e;n+=1)r[n]=255&t[n];return r}function u(t){if(t>=2147483647)throw new RangeError(\"Attempt to allocate Buffer larger than maximum size: 0x\"+2147483647..toString(16)+\" bytes\");return 0|t}function f(t,e){if(a.isBuffer(t))return t.length;if(ArrayBuffer.isView(t)||B(t,ArrayBuffer))return t.byteLength;if(\"string\"!=typeof t)throw new TypeError('The \"string\" argument must be one of type string, Buffer, or ArrayBuffer. Received type '+typeof t);var r=t.length,n=arguments.length>2&&!0===arguments[2];if(!n&&0===r)return 0;for(var i=!1;;)switch(e){case\"ascii\":case\"latin1\":case\"binary\":return r;case\"utf8\":case\"utf-8\":return D(t).length;case\"ucs2\":case\"ucs-2\":case\"utf16le\":case\"utf-16le\":return 2*r;case\"hex\":return r>>>1;case\"base64\":return R(t).length;default:if(i)return n?-1:D(t).length;e=(\"\"+e).toLowerCase(),i=!0}}function h(t,e,r){var n=!1;if((void 0===e||e<0)&&(e=0),e>this.length)return\"\";if((void 0===r||r>this.length)&&(r=this.length),r<=0)return\"\";if((r>>>=0)<=(e>>>=0))return\"\";for(t||(t=\"utf8\");;)switch(t){case\"hex\":return M(this,e,r);case\"utf8\":case\"utf-8\":return T(this,e,r);case\"ascii\":return k(this,e,r);case\"latin1\":case\"binary\":return A(this,e,r);case\"base64\":return w(this,e,r);case\"ucs2\":case\"ucs-2\":case\"utf16le\":case\"utf-16le\":return S(this,e,r);default:if(n)throw new TypeError(\"Unknown encoding: \"+t);t=(t+\"\").toLowerCase(),n=!0}}function p(t,e,r){var n=t[e];t[e]=t[r],t[r]=n}function d(t,e,r,n,i){if(0===t.length)return-1;if(\"string\"==typeof r?(n=r,r=0):r>2147483647?r=2147483647:r<-2147483648&&(r=-2147483648),N(r=+r)&&(r=i?0:t.length-1),r<0&&(r=t.length+r),r>=t.length){if(i)return-1;r=t.length-1}else if(r<0){if(!i)return-1;r=0}i
2021-10-08 13:55:20 +02:00
"/*!\n",
" * Determine if an object is a Buffer\n",
" *\n",
" * @author Feross Aboukhadijeh <https://feross.org>\n",
" * @license MIT\n",
" */\n",
2022-02-14 13:34:42 +01:00
"e.exports=function(t){return null!=t&&(n(t)||function(t){return\"function\"==typeof t.readFloatLE&&\"function\"==typeof t.slice&&n(t.slice(0,0))}(t)||!!t._isBuffer)}},{}],238:[function(t,e,r){\"use strict\";e.exports=a,e.exports.isMobile=a,e.exports.default=a;var n=/(android|bb\\d+|meego).+mobile|avantgo|bada\\/|blackberry|blazer|compal|elaine|fennec|hiptop|iemobile|ip(hone|od)|iris|kindle|lge |maemo|midp|mmp|mobile.+firefox|netfront|opera m(ob|in)i|palm( os)?|phone|p(ixi|re)\\/|plucker|pocket|psp|series[46]0|symbian|treo|up\\.(browser|link)|vodafone|wap|windows (ce|phone)|xda|xiino/i,i=/(android|bb\\d+|meego).+mobile|avantgo|bada\\/|blackberry|blazer|compal|elaine|fennec|hiptop|iemobile|ip(hone|od)|iris|kindle|lge |maemo|midp|mmp|mobile.+firefox|netfront|opera m(ob|in)i|palm( os)?|phone|p(ixi|re)\\/|plucker|pocket|psp|series[46]0|symbian|treo|up\\.(browser|link)|vodafone|wap|windows (ce|phone)|xda|xiino|android|ipad|playbook|silk/i;function a(t){t||(t={});var e=t.ua;if(e||\"undefined\"==typeof navigator||(e=navigator.userAgent),e&&e.headers&&\"string\"==typeof e.headers[\"user-agent\"]&&(e=e.headers[\"user-agent\"]),\"string\"!=typeof e)return!1;var r=t.tablet?i.test(e):n.test(e);return!r&&t.tablet&&t.featureDetect&&navigator&&navigator.maxTouchPoints>1&&-1!==e.indexOf(\"Macintosh\")&&-1!==e.indexOf(\"Safari\")&&(r=!0),r}},{}],239:[function(t,e,r){\"use strict\";e.exports=function(t){for(var e,r=t.length,n=0;n<r;n++)if(((e=t.charCodeAt(n))<9||e>13)&&32!==e&&133!==e&&160!==e&&5760!==e&&6158!==e&&(e<8192||e>8205)&&8232!==e&&8233!==e&&8239!==e&&8287!==e&&8288!==e&&12288!==e&&65279!==e)return!1;return!0}},{}],240:[function(t,e,r){e.exports=function(t,e,r){return t*(1-r)+e*r}},{}],241:[function(t,e,r){var n=t(\"./normalize\"),i=t(\"gl-mat4/create\"),a=t(\"gl-mat4/clone\"),o=t(\"gl-mat4/determinant\"),s=t(\"gl-mat4/invert\"),l=t(\"gl-mat4/transpose\"),c={length:t(\"gl-vec3/length\"),normalize:t(\"gl-vec3/normalize\"),dot:t(\"gl-vec3/dot\"),cross:t(\"gl-vec3/cross\")},u=i(),f=i(),h=[0,0,0,0],p=[[0,0,0],[0,0,0],[0,0,0]],d=[0,0,0];function g(t,e,r,n,i){t[0]=e[0]*n+r[0]*i,t[1]=e[1]*n+r[1]*i,t[2]=e[2]*n+r[2]*i}e.exports=function(t,e,r,i,m,v){if(e||(e=[0,0,0]),r||(r=[0,0,0]),i||(i=[0,0,0]),m||(m=[0,0,0,1]),v||(v=[0,0,0,1]),!n(u,t))return!1;if(a(f,u),f[3]=0,f[7]=0,f[11]=0,f[15]=1,Math.abs(o(f)<1e-8))return!1;var y,x,b,_,w,T,k,A=u[3],M=u[7],S=u[11],E=u[12],L=u[13],C=u[14],P=u[15];if(0!==A||0!==M||0!==S){if(h[0]=A,h[1]=M,h[2]=S,h[3]=P,!s(f,f))return!1;l(f,f),y=m,b=f,_=(x=h)[0],w=x[1],T=x[2],k=x[3],y[0]=b[0]*_+b[4]*w+b[8]*T+b[12]*k,y[1]=b[1]*_+b[5]*w+b[9]*T+b[13]*k,y[2]=b[2]*_+b[6]*w+b[10]*T+b[14]*k,y[3]=b[3]*_+b[7]*w+b[11]*T+b[15]*k}else m[0]=m[1]=m[2]=0,m[3]=1;if(e[0]=E,e[1]=L,e[2]=C,function(t,e){t[0][0]=e[0],t[0][1]=e[1],t[0][2]=e[2],t[1][0]=e[4],t[1][1]=e[5],t[1][2]=e[6],t[2][0]=e[8],t[2][1]=e[9],t[2][2]=e[10]}(p,u),r[0]=c.length(p[0]),c.normalize(p[0],p[0]),i[0]=c.dot(p[0],p[1]),g(p[1],p[1],p[0],1,-i[0]),r[1]=c.length(p[1]),c.normalize(p[1],p[1]),i[0]/=r[1],i[1]=c.dot(p[0],p[2]),g(p[2],p[2],p[0],1,-i[1]),i[2]=c.dot(p[1],p[2]),g(p[2],p[2],p[1],1,-i[2]),r[2]=c.length(p[2]),c.normalize(p[2],p[2]),i[1]/=r[2],i[2]/=r[2],c.cross(d,p[1],p[2]),c.dot(p[0],d)<0)for(var I=0;I<3;I++)r[I]*=-1,p[I][0]*=-1,p[I][1]*=-1,p[I][2]*=-1;return v[0]=.5*Math.sqrt(Math.max(1+p[0][0]-p[1][1]-p[2][2],0)),v[1]=.5*Math.sqrt(Math.max(1-p[0][0]+p[1][1]-p[2][2],0)),v[2]=.5*Math.sqrt(Math.max(1-p[0][0]-p[1][1]+p[2][2],0)),v[3]=.5*Math.sqrt(Math.max(1+p[0][0]+p[1][1]+p[2][2],0)),p[2][1]>p[1][2]&&(v[0]=-v[0]),p[0][2]>p[2][0]&&(v[1]=-v[1]),p[1][0]>p[0][1]&&(v[2]=-v[2]),!0}},{\"./normalize\":242,\"gl-mat4/clone\":92,\"gl-mat4/create\":93,\"gl-mat4/determinant\":94,\"gl-mat4/invert\":98,\"gl-mat4/transpose\":109,\"gl-vec3/cross\":157,\"gl-vec3/dot\":162,\"gl-vec3/length\":172,\"gl-vec3/normalize\":179}],242:[function(t,e,r){e.exports=function(t,e){var r=e[15];if(0===r)return!1;for(var n=1/r,i=0;i<16;i++)t[i]=e[i]*n;return!0}},{}],243:[function(t,e,r){var n=t(\"gl-vec3/lerp\"),i=t(\"mat4-recompose\"),a=t(\"mat4-decompose\"),o=t(\"gl-mat4/determinant\"),s=t(\"
2021-10-08 13:55:20 +02:00
"/*!\n",
" * pad-left <https://github.com/jonschlinkert/pad-left>\n",
" *\n",
" * Copyright (c) 2014-2015, Jon Schlinkert.\n",
" * Licensed under the MIT license.\n",
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2022-02-14 13:34:42 +01:00
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"execution_count": 13,
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"source": [
"data = opendoar_subjects.groupby('repository_metadata.content_subjects')[['system_metadata.id']].count().sort_values('system_metadata.id', ascending=False)\n",
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{
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"source": [
"**ROAR**"
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},
{
"cell_type": "code",
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"execution_count": 15,
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"metadata": {},
"outputs": [],
"source": [
"roar_subjects = roar_df.explode('subjects')"
]
},
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"cell_type": "code",
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"execution_count": 16,
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},
"title": {
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},
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"<div> <div id=\"457d448f-a9bc-4c08-862b-b9cec750a8c1\" class=\"plotly-graph-div\" style=\"height:525px; width:100%;\"></div> <script type=\"text/javascript\"> require([\"plotly\"], function(Plotly) { window.PLOTLYENV=window.PLOTLYENV || {}; if (document.getElementById(\"457d448f-a9bc-4c08-862b-b9cec750a8c1\")) { Plotly.newPlot( \"457d448f-a9bc-4c08-862b-b9cec750a8c1\", [{\"name\":\"FAIRsharing\",\"x\":[\"Life Science\",\"Biomedical Science\",\"Earth Science\",\"Genomics\",\"Environmental Science\",\"Oceanography\",\"Biodiversity\",\"Epidemiology\",\"Biology\",\"Atmospheric Science\",\"Genetics\",\"Health Science\",\"Subject Agnostic\",\"Bioinformatics\",\"Proteomics\",\"Virology\",\"Agriculture\",\"Geology\",\"Transcriptomics\",\"Comparative Genomics\",\"Clinical Studies\",\"Chemistry\",\"Preclinical Studies\",\"Data Management\",\"Botany\",\"Medicine\",\"Functional Genomics\",\"Geophysics\",\"Meteorology\",\"Systems Biology\",\"Social Science\",\"Ecology\",\"Metabolomics\",\"Geography\",\"Marine Biology\",\"Physics\",\"Economics\",\"Taxonomy\",\"Biochemistry\",\"Microbiology\",\"Ontology and Terminology\",\"Astrophysics and Astronomy\",\"Humanities and Social Science\",\"Hydrology\",\"Structural Biology\",\"Molecular biology\",\"Neurobiology\",\"Computational Biology\",\"Natural Science\",\"Infectious Disease Medicine\",\"Phylogenetics\",\"Medical Virology\",\"Developmental Biology\",\"Social and Behavioural Science\",\"Computer Science\",\"Anatomy\",\"Humanities\",\"Epigenetics\",\"Metagenomics\",\"Geochemistry\",\"Immunology\",\"Remote Sensing\",\"Knowledge and Information Systems\",\"Neuroscience\",\"Plant Genetics\",\"Public Health\",\"Demographics\",\"Critical Care Medicine\",\"Ecosystem Science\",\"Cell Biology\",\"Soil Science\",\"Data Visualization\",\"Data Integration\",\"Oncology\",\"Energy Engineering\",\"Materials Science\",\"Forest Management\",\"Hydrogeology\",\"Drug Discovery\",\"Water Management\",\"Glycomics\",\"Plant Breeding\",\"Water Research\",\"Phylogeny\",\"Geodesy\",\"Paleontology\",\"Phylogenomics\",\"Engineering Science\",\"Population Genetics\",\"Human Genetics\",\"Immunogenetics\",\"Software Engineering\",\"Mineralogy\",\"Pharmacology\",\"Computational Neuroscience\",\"Medical Informatics\",\"Freshwater Science\",\"Global Health\",\"Cheminformatics\",\"Evolutionary Biology\",\"Epigenomics\",\"Statistics\",\"Animal Genetics\",\"Translational Medicine\",\"Phenomics\",\"Political Science\",\"Omics\",\"Zoology\",\"Culture\",\"Psychology\",\"Mathematics\",\"Drug Development\",\"Nanotechnology\",\"Education Science\",\"Physical Geography\",\"Nutritional Science\",\"Population Dynamics\",\"Natural History\",\"Microbial Ecology\",\"Enzymology\",\"Neurophysiology\",\"Geoinformatics\",\"Food Security\",\"Pathology\",\"Analytical Chemistry\",\"Archaeology\",\"Data Governance\",\"Organic Chemistry\",\"Bioengineering\",\"History\",\"Biotechnology\",\"Database Management\",\"Computational Chemistry\",\"Animal Husbandry\",\"Toxicology\",\"Anthropology\",\"Architecture\",\"Plant Anatomy\",\"Cartography\",\"Art\",\"Data Quality\",\"Informatics\",\"Thermodynamics\",\"Materials Engineering\",\"Maritime Engineering\",\"Linguistics\",\"Urban Planning\",\"Civil Engineering\",\"Agronomy\",\"Fine Arts\",\"Synthetic Biology\",\"Toxicogenomics\",\"Cardiology\",\"Bathymetry\",\"Aerospace Engineering\",\"Art History\",\"Chemical Engineering\",\"Business Administration\",\"Primary Health Care\",\"Pharmacogenomics\",\"Power Engineering\",\"Economic and Social History\",\"Molecular Chemistry\",\"Endocrinology\",\"Fisheries Science\",\"Neurology\",\"Communication Science\",\"Criminology\",\"Tropical Medicine\",\"Geriatric Medicine\",\"Respiratory Medicine\",\"Transportation Planning\",\"Health Services Research\",\"Physiology\",\"Medicinal Chemistry\",\"Molecular Genetics\",\"Agricultural Engineering\",\"Molecular Microbiology\",\"Aquaculture\",\
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" \n",
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"var x = new MutationObserver(function (mutations, observer) {{\n",
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},
"metadata": {},
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],
"source": [
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"data = fairsharing_subjects.groupby('attributes.subjects')[['id']].count().sort_values('id', ascending=False)\n",
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"plot = [\n",
" go.Bar(\n",
" x=data.index,\n",
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" y=data['id'],\n",
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" name='FAIRsharing'\n",
" )\n",
"]\n",
"\n",
"layout = go.Layout(\n",
" title='Subject coverage FAIRsharing',\n",
" xaxis=dict(tickangle=45, tickfont=dict(size=12))\n",
")\n",
"\n",
"fig = go.Figure(plot, layout).show()"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Geographic analysis"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**re3data**"
]
},
{
"cell_type": "code",
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"execution_count": 19,
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"metadata": {},
"outputs": [
{
"data": {
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" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
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" <th>orgIdentifier</th>\n",
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" <th>institution</th>\n",
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" <th>institutionName</th>\n",
" <th>institutionAdditionalName</th>\n",
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" </tr>\n",
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" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>r3d100000001</td>\n",
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" <td>{'institutionName': 'Odum Institute for Resear...</td>\n",
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" <td>Odum Institute for Research in Social Science</td>\n",
" <td>[]</td>\n",
" <td>USA</td>\n",
" <td>[general]</td>\n",
" <td>non-profit</td>\n",
" <td>https://odum.unc.edu/archive/</td>\n",
" <td>[]</td>\n",
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" <tr>\n",
" <th>1</th>\n",
" <td>r3d100000002</td>\n",
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" <td>{'institutionName': 'The U.S. National Archive...</td>\n",
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" <td>The U.S. National Archives and Records Adminis...</td>\n",
" <td>[NARA, National Archives]</td>\n",
" <td>USA</td>\n",
" <td>[general]</td>\n",
" <td>non-profit</td>\n",
" <td>http://www.archives.gov/</td>\n",
" <td>[]</td>\n",
" <td></td>\n",
" <td></td>\n",
" <td>[http://www.archives.gov/contact/]</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>r3d100000002</td>\n",
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" <td>{'institutionName': 'The USA.gov', 'institutio...</td>\n",
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" <td>The USA.gov</td>\n",
" <td>[]</td>\n",
" <td>USA</td>\n",
" <td>[general]</td>\n",
" <td>non-profit</td>\n",
" <td>http://www.usa.gov/</td>\n",
" <td>[]</td>\n",
" <td></td>\n",
" <td></td>\n",
" <td>[http://www.usa.gov/Contact.shtml]</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>r3d100000004</td>\n",
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" <td>{'institutionName': 'Institut für Deutsche Spr...</td>\n",
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" <td>Institut für Deutsche Sprache, Archiv für Gesp...</td>\n",
" <td>[AGD]</td>\n",
" <td>DEU</td>\n",
" <td>[funding, general]</td>\n",
" <td>non-profit</td>\n",
" <td>http://agd.ids-mannheim.de/index.shtml</td>\n",
" <td>[]</td>\n",
" <td>2004</td>\n",
" <td></td>\n",
" <td>[agd@ids-mannheim.de]</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>r3d100000005</td>\n",
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" <td>{'institutionName': 'Odum Institute for Resear...</td>\n",
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" <td>Odum Institute for Research in Social Science</td>\n",
" <td>[]</td>\n",
" <td>USA</td>\n",
" <td>[technical]</td>\n",
" <td>non-profit</td>\n",
" <td>https://odum.unc.edu/</td>\n",
" <td>[]</td>\n",
" <td></td>\n",
" <td></td>\n",
" <td>[https://odum.unc.edu/contact/contact-form/, o...</td>\n",
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" orgIdentifier institution \\\n",
"0 r3d100000001 {'institutionName': 'Odum Institute for Resear... \n",
"1 r3d100000002 {'institutionName': 'The U.S. National Archive... \n",
"2 r3d100000002 {'institutionName': 'The USA.gov', 'institutio... \n",
"3 r3d100000004 {'institutionName': 'Institut für Deutsche Spr... \n",
"4 r3d100000005 {'institutionName': 'Odum Institute for Resear... \n",
"\n",
" institutionName \\\n",
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"0 Odum Institute for Research in Social Science \n",
"1 The U.S. National Archives and Records Adminis... \n",
"2 The USA.gov \n",
"3 Institut für Deutsche Sprache, Archiv für Gesp... \n",
"4 Odum Institute for Research in Social Science \n",
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" institutionAdditionalName institutionCountry responsabilityType \\\n",
"0 [] USA [general] \n",
"1 [NARA, National Archives] USA [general] \n",
"2 [] USA [general] \n",
"3 [AGD] DEU [funding, general] \n",
"4 [] USA [technical] \n",
"\n",
" institutionType institutionURL \\\n",
"0 non-profit https://odum.unc.edu/archive/ \n",
"1 non-profit http://www.archives.gov/ \n",
"2 non-profit http://www.usa.gov/ \n",
"3 non-profit http://agd.ids-mannheim.de/index.shtml \n",
"4 non-profit https://odum.unc.edu/ \n",
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"4 [] \n",
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" institutionContact \n",
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"0 [] \n",
"1 [http://www.archives.gov/contact/] \n",
"2 [http://www.usa.gov/Contact.shtml] \n",
"3 [agd@ids-mannheim.de] \n",
"4 [https://odum.unc.edu/contact/contact-form/, o... "
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},
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"execution_count": 19,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"re3data_institutions = re3data_df.explode('institution')[['orgIdentifier', 'institution']]\n",
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"re3data_institutions = re3data_institutions[~re3data_institutions.institution.isna()].reset_index(drop=True)\n",
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"re3data_institutions = re3data_institutions.join(pd.json_normalize(re3data_institutions.institution))\n",
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"re3data_institutions.head()"
]
},
{
"cell_type": "code",
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"execution_count": 20,
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"metadata": {},
"outputs": [],
"source": [
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"re3data_institutions['org_continent'] = re3data_institutions.institutionCountry.map(countrycode_to_continent)"
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]
},
{
"cell_type": "code",
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"execution_count": 21,
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"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"array(['AAA', 'EEC'], dtype=object)"
]
},
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"execution_count": 21,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"re3data_institutions[re3data_institutions.org_continent.isna()].institutionCountry.unique()"
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]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"AAA is used for international collaborations; we skip this.\n",
"EEC is used for the EU commission; we fix the continent manually."
]
},
{
"cell_type": "code",
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"execution_count": 22,
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"metadata": {},
"outputs": [],
"source": [
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"re3data_institutions.loc[re3data_institutions.institutionCountry == 'EEC', 'org_continent'] = 'EU'"
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]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**OpenDOAR**"
]
},
{
"cell_type": "code",
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"execution_count": 23,
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"metadata": {},
"outputs": [
{
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" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
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" <th>system_metadata.id</th>\n",
" <th>organization</th>\n",
" <th>name</th>\n",
" <th>alternativeName</th>\n",
" <th>country</th>\n",
" <th>url</th>\n",
" <th>identifier</th>\n",
" <th>location.latitude</th>\n",
" <th>location.longiture</th>\n",
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" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
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" <td>134</td>\n",
" <td>{'name': 'technische universität dortmund', 'a...</td>\n",
" <td>technische universität dortmund</td>\n",
" <td>tu dortmund</td>\n",
" <td>DEU</td>\n",
" <td>https://www.tu-dortmund.de</td>\n",
" <td>[{'identifier': 'https://ror.org/01k97gp34', '...</td>\n",
" <td></td>\n",
" <td></td>\n",
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" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
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" <td>58</td>\n",
" <td>{'name': 'centre pour la communication scienti...</td>\n",
" <td>centre pour la communication scientifique directe</td>\n",
" <td>ccsd</td>\n",
" <td>FRA</td>\n",
" <td>https://www.ccsd.cnrs.fr</td>\n",
" <td>[]</td>\n",
" <td></td>\n",
" <td></td>\n",
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" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
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" <td>93</td>\n",
" <td>{'name': 'texas medical center', 'alternativeN...</td>\n",
" <td>texas medical center</td>\n",
" <td>tmc</td>\n",
" <td>USA</td>\n",
" <td>https://www.tmc.edu</td>\n",
" <td>[{'identifier': 'https://ror.org/00dqsbj20', '...</td>\n",
" <td></td>\n",
" <td></td>\n",
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" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
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" <td>68</td>\n",
" <td>{'name': 'university of southampton', 'alterna...</td>\n",
" <td>university of southampton</td>\n",
" <td></td>\n",
" <td>GBR</td>\n",
" <td>https://www.southampton.ac.uk/</td>\n",
" <td>[{'identifier': 'https://ror.org/01ryk1543', '...</td>\n",
" <td></td>\n",
" <td></td>\n",
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" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
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" <td>84</td>\n",
" <td>{'name': 'carleton college', 'alternativeName'...</td>\n",
" <td>carleton college</td>\n",
" <td></td>\n",
" <td>USA</td>\n",
" <td>https://www.carleton.edu</td>\n",
" <td>[{'identifier': 'https://ror.org/03jep7677', '...</td>\n",
" <td></td>\n",
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" <td></td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
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" system_metadata.id organization \\\n",
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"0 134 {'name': 'technische universität dortmund', 'a... \n",
"1 58 {'name': 'centre pour la communication scienti... \n",
"2 93 {'name': 'texas medical center', 'alternativeN... \n",
"3 68 {'name': 'university of southampton', 'alterna... \n",
"4 84 {'name': 'carleton college', 'alternativeName'... \n",
"\n",
" name alternativeName country \\\n",
"0 technische universität dortmund tu dortmund DEU \n",
"1 centre pour la communication scientifique directe ccsd FRA \n",
"2 texas medical center tmc USA \n",
"3 university of southampton GBR \n",
"4 carleton college USA \n",
"\n",
" url \\\n",
"0 https://www.tu-dortmund.de \n",
"1 https://www.ccsd.cnrs.fr \n",
"2 https://www.tmc.edu \n",
"3 https://www.southampton.ac.uk/ \n",
"4 https://www.carleton.edu \n",
"\n",
" identifier location.latitude \\\n",
"0 [{'identifier': 'https://ror.org/01k97gp34', '... \n",
"1 [] \n",
"2 [{'identifier': 'https://ror.org/00dqsbj20', '... \n",
"3 [{'identifier': 'https://ror.org/01ryk1543', '... \n",
"4 [{'identifier': 'https://ror.org/03jep7677', '... \n",
"\n",
" location.longiture \n",
"0 \n",
"1 \n",
"2 \n",
"3 \n",
"4 "
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]
},
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"execution_count": 23,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"opendoar_institutions = opendoar_df.explode('organization')[['system_metadata.id', 'organization']]\n",
"opendoar_institutions = opendoar_institutions[~opendoar_institutions.organization.isna()].reset_index(drop=True)\n",
"opendoar_institutions = opendoar_institutions.join(pd.json_normalize(opendoar_institutions.organization))\n",
"opendoar_institutions['country'] = opendoar_institutions.country.map(str.upper, na_action='ignore')\n",
"opendoar_institutions['country'] = opendoar_institutions.country.map(countrycode_iso2_to_countrycode_iso3, na_action='ignore')\n",
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"opendoar_institutions.head()"
]
},
{
"cell_type": "code",
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"execution_count": 24,
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"metadata": {},
"outputs": [],
"source": [
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"opendoar_institutions['org_continent'] = opendoar_institutions.country.map(countrycode_to_continent)"
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]
},
{
"cell_type": "code",
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"execution_count": 25,
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"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"array([nan, 'UMI'], dtype=object)"
]
},
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"execution_count": 25,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"opendoar_institutions[opendoar_institutions.org_continent.isna()].country.unique()"
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]
},
{
"cell_type": "code",
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"execution_count": 26,
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"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
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" }\n",
"\n",
" .dataframe thead th {\n",
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"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
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" <th>system_metadata.id</th>\n",
" <th>organization</th>\n",
" <th>name</th>\n",
" <th>alternativeName</th>\n",
" <th>country</th>\n",
" <th>url</th>\n",
" <th>identifier</th>\n",
" <th>location.latitude</th>\n",
" <th>location.longiture</th>\n",
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" <th>org_continent</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
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" <th>4233</th>\n",
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" <td>5379</td>\n",
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" <td>{'name': 'kettering university', 'alternativeN...</td>\n",
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" <td>kettering university</td>\n",
" <td></td>\n",
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" <td>UMI</td>\n",
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" <td>https://www.kettering.edu</td>\n",
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" <td>[{'identifier': 'https://ror.org/03rcspa57', '...</td>\n",
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" <td></td>\n",
" <td></td>\n",
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" <td>NA</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
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" system_metadata.id organization \\\n",
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"4233 5379 {'name': 'kettering university', 'alternativeN... \n",
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"\n",
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" name alternativeName country url \\\n",
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"4233 kettering university UMI https://www.kettering.edu \n",
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"\n",
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" identifier location.latitude \\\n",
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"4233 [{'identifier': 'https://ror.org/03rcspa57', '... \n",
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"\n",
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" location.longiture org_continent \n",
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"4233 NA "
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]
},
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"execution_count": 26,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"opendoar_institutions.loc[opendoar_institutions.country == 'UMI', 'org_continent'] = 'NA'\n",
"opendoar_institutions[opendoar_institutions.country == 'UMI']"
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]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**ROAR**"
]
},
{
"cell_type": "code",
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"execution_count": 27,
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"metadata": {},
"outputs": [],
"source": [
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"roar_institutions = roar_df.explode('location_country')\n",
"roar_institutions['location_country'] = roar_institutions.location_country.map(str.upper, na_action='ignore')\n",
"roar_institutions['location_country'] = roar_institutions.location_country.map(countrycode_iso2_to_countrycode_iso3)\n",
"roar_institutions['continent'] = roar_institutions.location_country.map(countrycode_to_continent)"
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]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"**FAIRsharing**"
]
},
{
"cell_type": "code",
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"execution_count": 28,
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"metadata": {},
"outputs": [],
"source": [
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"fairsharing_countries = fairsharing_df.explode('attributes.countries')\n",
"fairsharing_countries['countrycode'] = fairsharing_countries['attributes.countries'].map(country_to_countrycode)\n",
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"fairsharing_countries['continent'] = fairsharing_countries.countrycode.map(countrycode_to_continent)"
]
},
{
"cell_type": "code",
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"execution_count": 29,
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"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
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"array(['European Union', 'Worldwide', nan], dtype=object)"
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]
},
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"execution_count": 29,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"fairsharing_countries[fairsharing_countries.countrycode.isna()]['attributes.countries'].unique()"
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]
},
{
"cell_type": "code",
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"execution_count": 30,
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"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
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"array(['European Union', 'Worldwide', nan, 'Antarctica'], dtype=object)"
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]
},
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"execution_count": 30,
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"metadata": {},
"output_type": "execute_result"
}
],
"source": [
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"fairsharing_countries[fairsharing_countries.continent.isna()]['attributes.countries'].unique()"
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]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"Fix manually some rows"
]
},
{
"cell_type": "code",
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"execution_count": 31,
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"metadata": {},
"outputs": [],
"source": [
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"fairsharing_countries.loc[fairsharing_countries['attributes.countries'] == 'Republic of Ireland', ['attributes.countries', 'countrycode', 'continent']] = ['Ireland', 'IE', 'EU']\n",
"fairsharing_countries.loc[fairsharing_countries['attributes.countries'] == 'European Union', ['countrycode', 'continent']] = ['EU', 'EU']"
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]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"Make Antactica disappear (only one repo)"
]
},
{
"cell_type": "code",
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"execution_count": 32,
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"metadata": {},
"outputs": [
{
"data": {
"text/html": [
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" <th></th>\n",
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" <th>id</th>\n",
" <th>type</th>\n",
" <th>attributes.created-at</th>\n",
" <th>attributes.updated-at</th>\n",
" <th>attributes.metadata.doi</th>\n",
" <th>attributes.metadata.name</th>\n",
" <th>attributes.metadata.status</th>\n",
" <th>attributes.metadata.contacts</th>\n",
" <th>attributes.metadata.homepage</th>\n",
" <th>attributes.metadata.identifier</th>\n",
" <th>attributes.metadata.description</th>\n",
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" <th>attributes.metadata.abbreviation</th>\n",
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" <th>attributes.metadata.support-links</th>\n",
" <th>attributes.metadata.year-creation</th>\n",
" <th>attributes.metadata.data-processes</th>\n",
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" <th>attributes.metadata.cross-references</th>\n",
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" <th>attributes.legacy-ids</th>\n",
" <th>attributes.fairsharing-registry</th>\n",
" <th>attributes.record-type</th>\n",
" <th>attributes.subjects</th>\n",
" <th>attributes.domains</th>\n",
" <th>attributes.taxonomies</th>\n",
" <th>attributes.user-defined-tags</th>\n",
" <th>attributes.countries</th>\n",
" <th>attributes.name</th>\n",
" <th>attributes.abbreviation</th>\n",
" <th>attributes.url</th>\n",
" <th>attributes.doi</th>\n",
" <th>attributes.fairsharing-licence</th>\n",
" <th>attributes.description</th>\n",
" <th>attributes.publications</th>\n",
" <th>attributes.licence-links</th>\n",
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" <th>attributes.url-for-logo</th>\n",
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" <th>attributes.metadata.citations</th>\n",
" <th>attributes.metadata.associated-tools</th>\n",
" <th>attributes.metadata.deprecation-reason</th>\n",
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" <th>attributes.metadata.data-access-condition.type</th>\n",
" <th>attributes.metadata.data-contact-information</th>\n",
" <th>attributes.metadata.data-deposition-condition.url</th>\n",
" <th>attributes.metadata.data-deposition-condition.type</th>\n",
" <th>attributes.metadata.deprecation-date</th>\n",
" <th>attributes.metadata.access-points</th>\n",
" <th>attributes.metadata.data-access-condition.url</th>\n",
" <th>attributes.metadata.resource-sustainability.url</th>\n",
" <th>attributes.metadata.resource-sustainability.name</th>\n",
" <th>attributes.metadata.data-preservation-policy.url</th>\n",
" <th>attributes.metadata.data-preservation-policy.name</th>\n",
" <th>attributes.metadata.data-access-for-pre-publication-review</th>\n",
" <th>attributes.metadata.data-versioning</th>\n",
" <th>attributes.metadata.data-curation.type</th>\n",
" <th>attributes.metadata.data-curation.url</th>\n",
" <th>attributes.metadata.citation-to-related-publications</th>\n",
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" <th>attributes.metadata.tombstone</th>\n",
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" <th>countrycode</th>\n",
" <th>continent</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
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" <th>325</th>\n",
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" <td>2462</td>\n",
" <td>fairsharing-records</td>\n",
" <td>2017-06-27T13:30:19.000Z</td>\n",
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" <td>2021-12-02T18:05:26.741Z</td>\n",
2021-10-08 14:28:56 +02:00
" <td>10.25504/FAIRsharing.ewyejx</td>\n",
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" <td>Antabif IPT - AntOBIS IPT - GBIF Belgium</td>\n",
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" <td>ready</td>\n",
" <td>[{'contact-name': 'Anton Van de Putte', 'conta...</td>\n",
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" <td>http://ipt.biodiversity.aq/</td>\n",
2021-10-08 14:28:56 +02:00
" <td>2462</td>\n",
" <td>The Belgium Biodiversity Platform hosts this d...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>NaN</td>\n",
2021-10-08 14:28:56 +02:00
" <td>[{'url': 'a.heughebaert@biodiversity.be', 'nam...</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2022-03-17 10:33:11 +01:00
" <td>NaN</td>\n",
2021-10-08 14:28:56 +02:00
" <td>[biodbcore-000944, bsg-d000944]</td>\n",
" <td>Database</td>\n",
" <td>repository</td>\n",
2021-07-22 11:03:05 +02:00
" <td>[Biodiversity, Life Science]</td>\n",
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" <td>[Taxonomic classification]</td>\n",
" <td>[All]</td>\n",
" <td>[]</td>\n",
" <td>Antarctica</td>\n",
" <td>FAIRsharing record for: Antabif IPT - AntOBIS ...</td>\n",
" <td>None</td>\n",
" <td>https://fairsharing.org/10.25504/FAIRsharing.e...</td>\n",
" <td>10.25504/FAIRsharing.ewyejx</td>\n",
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
" <td>This FAIRsharing record describes: The Belgium...</td>\n",
" <td>[]</td>\n",
" <td>[{'licence-name': 'Apache License 2.0', 'licen...</td>\n",
2022-03-17 10:33:11 +01:00
" <td>None</td>\n",
" <td>[]</td>\n",
" <td>NaN</td>\n",
" <td>None</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>AQ</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1094</th>\n",
" <td>3654</td>\n",
" <td>fairsharing-records</td>\n",
" <td>2021-12-02T09:58:02.958Z</td>\n",
" <td>2021-12-07T14:13:56.118Z</td>\n",
" <td>NaN</td>\n",
" <td>SCAR Antarctic Biodiversity Portal</td>\n",
" <td>ready</td>\n",
" <td>[{'contact-name': 'Anton Van de Putte', 'conta...</td>\n",
" <td>https://www.biodiversity.aq/</td>\n",
" <td>3654</td>\n",
" <td>Antarctic marine and terrestrial biodiversity ...</td>\n",
" <td>None</td>\n",
" <td>[{'url': 'https://www.biodiversity.aq/how-to/w...</td>\n",
" <td>2005.0</td>\n",
" <td>[{'url': 'https://www.biodiversity.aq/find-dat...</td>\n",
" <td>[{'url': 'https://www.re3data.org/repository/r...</td>\n",
" <td>[]</td>\n",
" <td>Database</td>\n",
" <td>knowledgebase</td>\n",
" <td>[Zoology, Taxonomy, Ecology, Biodiversity, Oce...</td>\n",
" <td>[]</td>\n",
" <td>[All]</td>\n",
" <td>[]</td>\n",
" <td>Antarctica</td>\n",
" <td>FAIRsharing record for: SCAR Antarctic Biodive...</td>\n",
" <td>None</td>\n",
" <td>https://fairsharing.org/fairsharing_records/3654</td>\n",
" <td>None</td>\n",
" <td>https://creativecommons.org/licenses/by-sa/4.0...</td>\n",
" <td>This FAIRsharing record describes: Antarctic m...</td>\n",
" <td>[]</td>\n",
" <td>[{'licence-name': 'SCAR Antarctic Biodiversity...</td>\n",
" <td>None</td>\n",
" <td>[]</td>\n",
" <td>[{'url': 'https://www.biodiversity.aq/tools/r-...</td>\n",
" <td></td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>[{'url': 'https://data.biodiversity.aq/api/v1....</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-10-08 14:28:56 +02:00
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
" <td>NaN</td>\n",
2021-07-22 11:03:05 +02:00
" <td>AQ</td>\n",
" <td>NaN</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
2022-03-17 10:33:11 +01:00
" id type attributes.created-at \\\n",
"325 2462 fairsharing-records 2017-06-27T13:30:19.000Z \n",
"1094 3654 fairsharing-records 2021-12-02T09:58:02.958Z \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.updated-at attributes.metadata.doi \\\n",
"325 2021-12-02T18:05:26.741Z 10.25504/FAIRsharing.ewyejx \n",
"1094 2021-12-07T14:13:56.118Z NaN \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.name attributes.metadata.status \\\n",
"325 Antabif IPT - AntOBIS IPT - GBIF Belgium ready \n",
"1094 SCAR Antarctic Biodiversity Portal ready \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.contacts \\\n",
"325 [{'contact-name': 'Anton Van de Putte', 'conta... \n",
"1094 [{'contact-name': 'Anton Van de Putte', 'conta... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.homepage attributes.metadata.identifier \\\n",
"325 http://ipt.biodiversity.aq/ 2462 \n",
"1094 https://www.biodiversity.aq/ 3654 \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.description \\\n",
"325 The Belgium Biodiversity Platform hosts this d... \n",
"1094 Antarctic marine and terrestrial biodiversity ... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.abbreviation \\\n",
"325 NaN \n",
"1094 None \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.support-links \\\n",
"325 [{'url': 'a.heughebaert@biodiversity.be', 'nam... \n",
"1094 [{'url': 'https://www.biodiversity.aq/how-to/w... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.year-creation \\\n",
"325 NaN \n",
"1094 2005.0 \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.data-processes \\\n",
"325 NaN \n",
"1094 [{'url': 'https://www.biodiversity.aq/find-dat... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.metadata.cross-references \\\n",
"325 NaN \n",
"1094 [{'url': 'https://www.re3data.org/repository/r... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.legacy-ids attributes.fairsharing-registry \\\n",
"325 [biodbcore-000944, bsg-d000944] Database \n",
"1094 [] Database \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.record-type \\\n",
"325 repository \n",
"1094 knowledgebase \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.subjects \\\n",
"325 [Biodiversity, Life Science] \n",
"1094 [Zoology, Taxonomy, Ecology, Biodiversity, Oce... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.domains attributes.taxonomies \\\n",
"325 [Taxonomic classification] [All] \n",
"1094 [] [All] \n",
2021-07-22 11:03:05 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.user-defined-tags attributes.countries \\\n",
"325 [] Antarctica \n",
"1094 [] Antarctica \n",
2021-07-22 11:03:05 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.name \\\n",
"325 FAIRsharing record for: Antabif IPT - AntOBIS ... \n",
"1094 FAIRsharing record for: SCAR Antarctic Biodive... \n",
2021-07-22 11:03:05 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.abbreviation \\\n",
"325 None \n",
"1094 None \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.url \\\n",
"325 https://fairsharing.org/10.25504/FAIRsharing.e... \n",
"1094 https://fairsharing.org/fairsharing_records/3654 \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.doi \\\n",
"325 10.25504/FAIRsharing.ewyejx \n",
"1094 None \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.fairsharing-licence \\\n",
"325 https://creativecommons.org/licenses/by-sa/4.0... \n",
"1094 https://creativecommons.org/licenses/by-sa/4.0... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.description \\\n",
"325 This FAIRsharing record describes: The Belgium... \n",
"1094 This FAIRsharing record describes: Antarctic m... \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.publications \\\n",
"325 [] \n",
"1094 [] \n",
2021-10-08 14:28:56 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.licence-links \\\n",
"325 [{'licence-name': 'Apache License 2.0', 'licen... \n",
"1094 [{'licence-name': 'SCAR Antarctic Biodiversity... \n",
2021-07-22 11:03:05 +02:00
"\n",
2022-03-17 10:33:11 +01:00
" attributes.url-for-logo attributes.metadata.citations \\\n",
"325 None [] \n",
"1094 None [] \n",
"\n",
" attributes.metadata.associated-tools \\\n",
"325 NaN \n",
"1094 [{'url': 'https://www.biodiversity.aq/tools/r-... \n",
"\n",
" attributes.metadata.deprecation-reason \\\n",
"325 None \n",
"1094 \n",
"\n",
" attributes.metadata.data-access-condition.type \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-contact-information \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-deposition-condition.url \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-deposition-condition.type \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.deprecation-date \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.access-points \\\n",
"325 NaN \n",
"1094 [{'url': 'https://data.biodiversity.aq/api/v1.... \n",
"\n",
" attributes.metadata.data-access-condition.url \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.resource-sustainability.url \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.resource-sustainability.name \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-preservation-policy.url \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-preservation-policy.name \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-access-for-pre-publication-review \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-versioning \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-curation.type \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.data-curation.url \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.citation-to-related-publications \\\n",
"325 NaN \n",
"1094 NaN \n",
"\n",
" attributes.metadata.tombstone countrycode continent \n",
"325 NaN AQ NaN \n",
"1094 NaN AQ NaN "
2021-07-22 11:03:05 +02:00
]
},
2022-03-17 10:33:11 +01:00
"execution_count": 32,
2021-07-22 11:03:05 +02:00
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
2021-10-08 14:28:56 +02:00
"fairsharing_countries.loc[fairsharing_countries['attributes.countries'] == 'Antarctica', ['countrycode', 'continent']] = ['AQ', np.nan]\n",
2021-07-22 11:03:05 +02:00
"fairsharing_countries[fairsharing_countries.countrycode == 'AQ']"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"### Country coverage"
]
},
{
"cell_type": "code",
2022-03-17 10:33:11 +01:00
"execution_count": 33,
2021-07-22 11:03:05 +02:00
"metadata": {},
"outputs": [
{
"data": {
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"config": {
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"ESP",
"IND",
"CHN",
"ITA",
"NOR",
2021-10-08 14:28:56 +02:00
"AUT",
2021-07-22 11:03:05 +02:00
"SWE",
"BEL",
"DNK",
"RUS",
2021-10-08 14:28:56 +02:00
"POL",
2021-07-22 11:03:05 +02:00
"GRC",
2021-10-08 14:28:56 +02:00
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2021-07-22 11:03:05 +02:00
"IRL",
2022-02-14 13:34:42 +01:00
"ZAF",
"CZE",
2021-07-22 11:03:05 +02:00
"TWN",
2021-10-08 14:28:56 +02:00
"NZL",
"BRA",
2021-07-22 11:03:05 +02:00
"PRT",
2022-02-14 13:34:42 +01:00
"FIN",
2021-07-22 11:03:05 +02:00
"EST",
"KOR",
"COL",
"SRB",
2022-02-14 13:34:42 +01:00
"ISR",
2021-07-22 11:03:05 +02:00
"LTU",
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2022-02-14 13:34:42 +01:00
"ARG",
2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
"IDN",
2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
"LUX",
2022-02-14 13:34:42 +01:00
"PAK",
2021-10-08 14:28:56 +02:00
"PER",
2022-02-14 13:34:42 +01:00
"LVA",
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2021-07-22 11:03:05 +02:00
"CHL",
2021-10-08 14:28:56 +02:00
"HRV",
2022-02-14 13:34:42 +01:00
"GRL",
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2021-10-08 14:28:56 +02:00
"SDN",
2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
"AZE",
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2021-10-08 14:28:56 +02:00
"PYF",
2022-02-14 13:34:42 +01:00
"EGY"
2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2021-10-08 14:28:56 +02:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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2021-07-22 11:03:05 +02:00
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2022-02-14 13:34:42 +01:00
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"source": [
2021-10-08 14:28:56 +02:00
"data1 = re3data_institutions.groupby('institutionCountry')[['orgIdentifier']].count().sort_values('orgIdentifier', ascending=False)\n",
"data2 = opendoar_institutions.groupby('country')[['system_metadata.id']].count().sort_values('system_metadata.id', ascending=False)\n",
"data3 = roar_institutions.groupby('location_country')[['eprintid']].count().sort_values('eprintid', ascending=False)\n",
"data4 = fairsharing_countries.groupby('countrycode')[['id']].count().sort_values('id', ascending=False)\n",
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"\n",
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"source": [
"### Continental coverage"
]
},
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2022-03-17 10:33:11 +01:00
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2021-07-22 11:03:05 +02:00
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2022-03-17 10:33:11 +01:00
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},
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],
"source": [
2021-10-08 14:28:56 +02:00
"data1 = re3data_institutions.groupby('org_continent')[['orgIdentifier']].count()\n",
"data2 = opendoar_institutions.groupby('org_continent')[['system_metadata.id']].count()\n",
"data3 = roar_institutions.groupby('continent')[['eprintid']].count()\n",
"data4 = fairsharing_countries.groupby('continent')[['id']].count()\n",
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"\n",
"plot = [\n",
" go.Scatterpolar(\n",
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" r=data1.orgIdentifier,\n",
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" theta=data1.index,\n",
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]
},
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