From 718c8f724c63eafca812ae940f86a606d9b90dd7 Mon Sep 17 00:00:00 2001
From: Andrea Mannocci <andremann@libero.it>
Date: Tue, 23 Mar 2021 10:20:23 +0100
Subject: [PATCH] better top_n function

---
 notebooks/01-Exploration.ipynb | 205 ++++++++++++++-------------------
 1 file changed, 86 insertions(+), 119 deletions(-)

diff --git a/notebooks/01-Exploration.ipynb b/notebooks/01-Exploration.ipynb
index 1578d63..e08c869 100644
--- a/notebooks/01-Exploration.ipynb
+++ b/notebooks/01-Exploration.ipynb
@@ -1794,7 +1794,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 65,
+   "execution_count": 86,
    "metadata": {},
    "outputs": [
     {
@@ -1808,8 +1808,70 @@
        "data": [
         {
          "type": "bar",
-         "x": [],
-         "y": []
+         "x": [
+          "gmail.com",
+          "hotmail.com",
+          "yahoo.com",
+          "163.com",
+          "yuhs.ac",
+          "qq.com",
+          "outlook.com",
+          "126.com",
+          "bu.edu",
+          "usgs.gov",
+          "mail.ru",
+          "usp.br",
+          "yahoo.com.br",
+          "ua.pt",
+          "umich.edu",
+          "ust.hk",
+          "foxmail.com",
+          "uomustansiriyah.edu.iq",
+          "yandex.ru",
+          "uq.edu.au",
+          "ukr.net",
+          "unesp.br",
+          "ucl.ac.uk",
+          "ieee.org",
+          "stcatz.ox.ac.uk",
+          "st-annes.ox.ac.uk",
+          "naver.com",
+          "yahoo.fr",
+          "ucm.es",
+          "live.com"
+         ],
+         "y": [
+          25892,
+          3674,
+          2578,
+          2067,
+          1124,
+          1035,
+          914,
+          755,
+          626,
+          584,
+          564,
+          455,
+          454,
+          291,
+          290,
+          278,
+          249,
+          242,
+          237,
+          234,
+          220,
+          214,
+          204,
+          203,
+          185,
+          184,
+          182,
+          172,
+          166,
+          159
+         ]
         }
        ],
        "layout": {
@@ -2620,12 +2682,12 @@
          }
         },
         "title": {
-         "text": "Top 0 email domains"
+         "text": "Top 30 email domains"
         },
         "xaxis": {
          "range": [
-          0,
-          0
+          -0.5,
+          29.5
          ],
          "tickangle": 45,
          "tickfont": {
@@ -2635,9 +2697,9 @@
        }
       },
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\"mapbox\": {\"style\": \"light\"}, \"paper_bgcolor\": \"white\", \"plot_bgcolor\": \"#E5ECF6\", \"polar\": {\"angularaxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"bgcolor\": \"#E5ECF6\", \"radialaxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}}, \"scene\": {\"xaxis\": {\"backgroundcolor\": \"#E5ECF6\", \"gridcolor\": \"white\", \"gridwidth\": 2, \"linecolor\": \"white\", \"showbackground\": true, \"ticks\": \"\", \"zerolinecolor\": \"white\"}, \"yaxis\": {\"backgroundcolor\": \"#E5ECF6\", \"gridcolor\": \"white\", \"gridwidth\": 2, \"linecolor\": \"white\", \"showbackground\": true, \"ticks\": \"\", \"zerolinecolor\": \"white\"}, \"zaxis\": {\"backgroundcolor\": \"#E5ECF6\", \"gridcolor\": \"white\", \"gridwidth\": 2, \"linecolor\": \"white\", \"showbackground\": true, \"ticks\": \"\", \"zerolinecolor\": \"white\"}}, \"shapedefaults\": {\"line\": {\"color\": \"#2a3f5f\"}}, \"ternary\": {\"aaxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"baxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}, \"bgcolor\": \"#E5ECF6\", \"caxis\": {\"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\"}}, \"title\": {\"x\": 0.05}, \"xaxis\": {\"automargin\": true, \"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\", \"title\": {\"standoff\": 15}, \"zerolinecolor\": \"white\", \"zerolinewidth\": 2}, \"yaxis\": {\"automargin\": true, \"gridcolor\": \"white\", \"linecolor\": \"white\", \"ticks\": \"\", \"title\": {\"standoff\": 15}, \"zerolinecolor\": \"white\", \"zerolinewidth\": 2}}}, \"title\": {\"text\": \"Top 30 email domains\"}, \"xaxis\": {\"range\": [-0.5, 29.5], \"tickangle\": 45, \"tickfont\": {\"size\": 12}}},                        {\"responsive\": true}                    ).then(function(){\n",
        "                            \n",
-       "var gd = document.getElementById('6a86ba70-1669-4a99-86f2-2d78c2a4eda9');\n",
+       "var gd = document.getElementById('984dd31d-092f-422c-94f3-1d11449bf569');\n",
        "var x = new MutationObserver(function (mutations, observer) {{\n",
        "        var display = window.getComputedStyle(gd).display;\n",
        "        if (!display || display === 'none') {{\n",
@@ -2954,119 +3016,24 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 36,
+   "execution_count": null,
    "metadata": {},
-   "outputs": [
-    {
-     "data": {
-      "text/html": [
-       "<div>\n",
-       "<style scoped>\n",
-       "    .dataframe tbody tr th:only-of-type {\n",
-       "        vertical-align: middle;\n",
-       "    }\n",
-       "\n",
-       "    .dataframe tbody tr th {\n",
-       "        vertical-align: top;\n",
-       "    }\n",
-       "\n",
-       "    .dataframe thead th {\n",
-       "        text-align: right;\n",
-       "    }\n",
-       "</style>\n",
-       "<table border=\"1\" class=\"dataframe\">\n",
-       "  <thead>\n",
-       "    <tr style=\"text-align: right;\">\n",
-       "      <th></th>\n",
-       "      <th>orcid</th>\n",
-       "      <th>n_emails</th>\n",
-       "    </tr>\n",
-       "  </thead>\n",
-       "  <tbody>\n",
-       "    <tr>\n",
-       "      <th>2039718</th>\n",
-       "      <td>0000-0003-4171-3835</td>\n",
-       "      <td>12.0</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>57198</th>\n",
-       "      <td>0000-0001-6239-2968</td>\n",
-       "      <td>9.0</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>10524509</th>\n",
-       "      <td>0000-0003-2290-2817</td>\n",
-       "      <td>7.0</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>7785216</th>\n",
-       "      <td>0000-0003-2151-4089</td>\n",
-       "      <td>7.0</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>3556386</th>\n",
-       "      <td>0000-0001-9084-3156</td>\n",
-       "      <td>6.0</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>...</th>\n",
-       "      <td>...</td>\n",
-       "      <td>...</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>10747035</th>\n",
-       "      <td>0000-0003-4998-1551</td>\n",
-       "      <td>NaN</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>10747036</th>\n",
-       "      <td>0000-0003-4998-4111</td>\n",
-       "      <td>NaN</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>10747037</th>\n",
-       "      <td>0000-0003-4998-6045</td>\n",
-       "      <td>NaN</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>10747038</th>\n",
-       "      <td>0000-0003-4998-8868</td>\n",
-       "      <td>NaN</td>\n",
-       "    </tr>\n",
-       "    <tr>\n",
-       "      <th>10747039</th>\n",
-       "      <td>0000-0003-4999-7916</td>\n",
-       "      <td>NaN</td>\n",
-       "    </tr>\n",
-       "  </tbody>\n",
-       "</table>\n",
-       "<p>10744621 rows × 2 columns</p>\n",
-       "</div>"
-      ],
-      "text/plain": [
-       "                        orcid  n_emails\n",
-       "2039718   0000-0003-4171-3835      12.0\n",
-       "57198     0000-0001-6239-2968       9.0\n",
-       "10524509  0000-0003-2290-2817       7.0\n",
-       "7785216   0000-0003-2151-4089       7.0\n",
-       "3556386   0000-0001-9084-3156       6.0\n",
-       "...                       ...       ...\n",
-       "10747035  0000-0003-4998-1551       NaN\n",
-       "10747036  0000-0003-4998-4111       NaN\n",
-       "10747037  0000-0003-4998-6045       NaN\n",
-       "10747038  0000-0003-4998-8868       NaN\n",
-       "10747039  0000-0003-4999-7916       NaN\n",
-       "\n",
-       "[10744621 rows x 2 columns]"
-      ]
-     },
-     "execution_count": 36,
-     "metadata": {},
-     "output_type": "execute_result"
-    }
-   ],
+   "outputs": [],
    "source": [
-    "df.sort_values('n_emails', ascending=False)[['orcid', 'n_emails']]"
+    "set_top_n(30)\n",
+    "data = [\n",
+    "    go.Bar(\n",
+    "        x=df.sort_values('n_emails', ascending=False)['orcid'][:TOP_N],\n",
+    "        y=df.sort_values('n_emails', ascending=False)['n_emails'][:TOP_N]\n",
+    "    )\n",
+    "]\n",
+    "\n",
+    "layout = go.Layout(\n",
+    "    title='Top %s ORCiD by email' % TOP_N, \n",
+    "    xaxis=dict(tickangle=45, tickfont=dict(size=12), range=TOP_RANGE)\n",
+    ")\n",
+    "fig = go.Figure(data=data, layout=layout)\n",
+    "plotly.offline.iplot(fig)"
    ]
   },
   {