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43 lines
1.9 KiB
Docker
43 lines
1.9 KiB
Docker
FROM d4science/r-full:latest
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LABEL org.d4science.image.licenses="EUPL-1.2" \
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org.d4science.image.source="https://github.com/rocker-org/rocker-versioned2" \
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org.d4science.image.vendor="D4Science <https://www.d4science.org>" \
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org.d4science.image.authors="Andrea Dell'Amico <andrea.dellamico@isti.cnr.it>, Roberto Cirillo <roberto.cirillo@isti.cnr.it>" \
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org.d4science.image.r_version="2022.02.1+461"
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ENV S6_VERSION=v2.1.0.2
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ENV RSTUDIO_VERSION=2022.02.1+461
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ENV DEFAULT_USER=rstudio
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ENV PANDOC_VERSION=default
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ENV PATH=/usr/lib/rstudio-server/bin:$PATH
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RUN /rocker_scripts/install_rstudio.sh
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RUN /rocker_scripts/install_pandoc.sh
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RUN apt-get update && apt-get install -y fuse zip jq openjdk-8-jdk-headless
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# This part comes from https://github.com/openanalytics/shinyproxy-rstudio-ide-demo/blob/master/Dockerfile
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RUN echo "www-frame-origin=same" >> /etc/rstudio/disable_auth_rserver.conf
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RUN echo "www-verify-user-agent=0" >> /etc/rstudio/disable_auth_rserver.conf
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ADD 01_set_env.sh /etc/cont-init.d/01_set_env
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ADD 02_userconf.sh /etc/cont-init.d/02_userconf
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ADD 03_setup_root_path.sh /etc/cont-init.d/03_setup_root_path
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# By default RStudio does not give access to all enviornment variables defined in the container (e.g. using ShinyProxy).
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# Uncomment the next line, to change this behavior.
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#ADD 04_copy_env.sh /etc/cont-init.d/04_copy_env
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ADD 05_setup_rsession_parameters.sh /etc/cont-init.d/05_setup_rsession_parameters
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# Prepare the workspace environment
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RUN mkdir -p /opt/workspace-lib
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RUN mkdir /var/log/workspace-lib
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ADD https://maven.d4science.org/nexus/content/repositories/gcube-snapshots/org/gcube/data-access/sh-fuse-integration/2.0.0-SNAPSHOT/sh-fuse-integration-2.0.0-20211005.090627-1-jar-with-dependencies.jar /opt/workspace-lib/fuse-workspace.jar
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ADD 06_workspace_mount.sh /etc/cont-init.d/06_workspace_mount
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ADD 06-fuse-logback.xml /opt/workspace-lib/logback.xml
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EXPOSE 8787
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CMD ["/init"]
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