Set GITHUB_PAT
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@ -45,8 +45,8 @@ RUN for l in `cat /tmp/r_non_cran_pkgs.txt` ; do \
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# From github
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ADD https://code-repo.d4science.org/gCubeSystem/r-packages-list/raw/branch/master/r_github_pkgs.txt /tmp
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#RUN mkdir -p /etc/R
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#RUN echo "GITHUB_PAT=$GITHUB_PAT" >> /etc/R/Renviron.site
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RUN mkdir -p /etc/R
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RUN echo "GITHUB_PAT=$GITHUB_PAT" >> /etc/R/Renviron.site
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#RUN for g in `cat /tmp/r_github_pkgs.txt` ; do \
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# Rscript --slave --no-site-file --no-init-file --no-save --no-restore-history \
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# -e " require(devtools); devtools::install_github('$g')" ; done
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