commit eae69f8ee458054dc3a6b65d44d3ecc474fedf80 Author: Mauro Mugnaini Date: Mon Oct 26 13:27:25 2020 +0100 First commit diff --git a/CHANGELOG.md b/CHANGELOG.md new file mode 100644 index 0000000..3a3f3c0 --- /dev/null +++ b/CHANGELOG.md @@ -0,0 +1,13 @@ +This project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). + +# Changelog for "conductor-setup" + +## [v0.1.0-SNAPSHOT] + +- First release. It provides Conductor HA with 2 instances. (#19689).
+ Currently the Docker Swamrs Stack deploys: + - 4 Dynomites nodes (2 shards with 1 replication each one, handled by Dynomite directly) backed by Redis DB in the same container + - 2 Conductor server nodes with 2 replicas handled by Swarm + - 2 Conductor UI nodes with 2 replicas handled by Swarm + - 1 Elasticsearch node + diff --git a/FUNDING.md b/FUNDING.md new file mode 100644 index 0000000..9e48b94 --- /dev/null +++ b/FUNDING.md @@ -0,0 +1,26 @@ +# Acknowledgments + +The projects leading to this software have received funding from a series of European Union programmes including: + +- the Sixth Framework Programme for Research and Technological Development + - [DILIGENT](https://cordis.europa.eu/project/id/004260) (grant no. 004260). +- the Seventh Framework Programme for research, technological development and demonstration + - [D4Science](https://cordis.europa.eu/project/id/212488) (grant no. 212488); + - [D4Science-II](https://cordis.europa.eu/project/id/239019) (grant no.239019); + - [ENVRI](https://cordis.europa.eu/project/id/283465) (grant no. 283465); + - [iMarine](https://cordis.europa.eu/project/id/283644) (grant no. 283644); + - [EUBrazilOpenBio](https://cordis.europa.eu/project/id/288754) (grant no. 288754). +- the H2020 research and innovation programme + - [SoBigData](https://cordis.europa.eu/project/id/654024) (grant no. 654024); + - [PARTHENOS](https://cordis.europa.eu/project/id/654119) (grant no. 654119); + - [EGI-Engage](https://cordis.europa.eu/project/id/654142) (grant no. 654142); + - [ENVRI PLUS](https://cordis.europa.eu/project/id/654182) (grant no. 654182); + - [BlueBRIDGE](https://cordis.europa.eu/project/id/675680) (grant no. 675680); + - [PerformFISH](https://cordis.europa.eu/project/id/727610) (grant no. 727610); + - [AGINFRA PLUS](https://cordis.europa.eu/project/id/731001) (grant no. 731001); + - [DESIRA](https://cordis.europa.eu/project/id/818194) (grant no. 818194); + - [ARIADNEplus](https://cordis.europa.eu/project/id/823914) (grant no. 823914); + - [RISIS 2](https://cordis.europa.eu/project/id/824091) (grant no. 824091); + - [EOSC-Pillar](https://cordis.europa.eu/project/id/857650) (grant no. 857650); + - [Blue Cloud](https://cordis.europa.eu/project/id/862409) (grant no. 862409); + - [SoBigData-PlusPlus](https://cordis.europa.eu/project/id/871042) (grant no. 871042); diff --git a/LICENSE.md b/LICENSE.md new file mode 100644 index 0000000..ac0a307 --- /dev/null +++ b/LICENSE.md @@ -0,0 +1,312 @@ +#European Union Public Licence V.1.1 + +##*EUPL © the European Community 2007* + + +This **European Union Public Licence** (the **“EUPL”**) applies to the Work or Software +(as defined below) which is provided under the terms of this Licence. 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Applicable Law + +This Licence shall be governed by the law of the European Union country where +the Licensor resides or has his registered office. + +This licence shall be governed by the Belgian law if: + +- a litigation arises between the European Commission, as a Licensor, and any +- Licensee; the Licensor, other than the European Commission, has no residence +- or registered office inside a European Union country. + + +--- + + +##Appendix + + +**“Compatible Licences”** according to article 5 EUPL are: + + +- GNU General Public License (GNU GPL) v. 2 + +- Open Software License (OSL) v. 2.1, v. 3.0 + +- Common Public License v. 1.0 + +- Eclipse Public License v. 1.0 + +- Cecill v. 2.0 + diff --git a/README.md b/README.md new file mode 100644 index 0000000..cc49014 --- /dev/null +++ b/README.md @@ -0,0 +1,57 @@ +# Conductor Setup + +**Conductor Setup** is composed by a Docker image script that should be used to build the autodynomite image, and 3 different Docker Compose Swarm YAML files to deploy the Conductor in HA. + +## Structure of the project + +The AutoDynomite Docker image script file is present in `dynomite` folder. +The Docker Compose Swarm files are present in the `stack` folder. + +## Built With + +* [Docker](https://www.docker.com) + +## Documentation + +The provided Docker stack files provide the following configuration: + - 4 Dynomites nodes (2 shards with 1 replication each one, handled by Dynomite directly) backed by Redis DB in the same container + - 2 Conductor Server nodes with 2 replicas handled by Swarm + - 2 Conductor UI nodes with 2 replicas handled by Swarm + - 1 Elasticsearch node + +Build the Docker `autodinomite` image with the `Dockerfile` present in the dynomite folder and launch the three Docker Compose Swarm files is sequence: +- dynomite-swarm.yaml +- elasticsearch-swarm.yaml +- conductor-swarm.yaml + +The command to be executed should looks like: `docker stack deploy -c dynomite-swarm.yaml -c elasticsearch-swarm.yaml -c conductor-swarm.yaml [your stack name]` + +If you plan to deploy more than 4 nodes for dynomite you should modify the `dynomite-swarm.yaml` and the `seeds.list` files as per your needs. +The `conductor-swarm-config.properties` should be let unmodified. + +## Change log + +See [CHANGELOG.md](CHANGELOG.md). + +## Authors + +* **Marco Lettere** ([Nubisware S.r.l.](http://www.nubisware.com)) +* **Mauro Mugnaini** ([Nubisware S.r.l.](http://www.nubisware.com)) + +## How to Cite this Software +[Intentionally left blank] + +## License + +This project is licensed under the EUPL V.1.1 License - see the [LICENSE.md](LICENSE.md) file for details. + +## About the gCube Framework +This software is part of the [gCubeFramework](https://www.gcube-system.org/ "gCubeFramework"): an +open-source software toolkit used for building and operating Hybrid Data +Infrastructures enabling the dynamic deployment of Virtual Research Environments +by favouring the realisation of reuse oriented policies. + +The projects leading to this software have received funding from a series of European Union programmes see [FUNDING.md](FUNDING.md) + +## Acknowledgments +[Intentionally left blank] diff --git a/dynomite/Dockerfile b/dynomite/Dockerfile new file mode 100644 index 0000000..6583f21 --- /dev/null +++ b/dynomite/Dockerfile @@ -0,0 +1,63 @@ +# +# Dockerfile derived from the good work of 'Iannis Papapanagiotou' (https://github.com/ipapapa/DynomiteDocker/blob/master/Dockerfile) +# It uses the startup.sh script to generate the dynomite conf YAML based on seeds.conf file provided via 'docker swarm configs' directive +# as '/dynomite/seeds.conf' and the DYNO_NODE env. variable that identifies the node itself (that must exactly match one of the lines in the seeds file) +# +# Set the base image to Ubuntu +FROM ubuntu:14.04 + +# File Author / Maintainer +MAINTAINER Marco Lettere, Mauro Mugnaini - Nubisware S.r.l. + +# Update the repository sources list and Install package Build Essential +RUN apt-get update && apt-get install -y \ + autoconf \ + build-essential \ + dh-autoreconf \ + git \ + libssl-dev \ + libtool \ + python-software-properties\ + redis-server \ + tcl8.5 + +# Clone the Dynomite Git +RUN git clone https://github.com/Netflix/dynomite.git +RUN echo 'Git repo has been cloned in your Docker VM' +WORKDIR dynomite/ + +# Autoreconf +RUN autoreconf -fvi \ + && ./configure --enable-debug=log \ + && CFLAGS="-ggdb3 -O0" ./configure --enable-debug=full \ + && make \ + && make install + +##################### INSTALLATION ENDS ##################### + +# Expose the peer port +#RUN echo 'Exposing peer port 8101' +EXPOSE 8101 + +# Expose the underlying Redis port +#RUN echo 'Exposing Redis port 22122' +EXPOSE 22122 + +# Expose the stats/admin port +#RUN echo 'Exposing stats/admin port 22222' +EXPOSE 22222 + +# Default port to acccess Dynomite +#RUN echo 'Exposing client port for Dynomite 8102' +EXPOSE 8102 + + +# Setting overcommit for Redis to be able to do BGSAVE/BGREWRITEAOF +RUN sysctl vm.overcommit_memory=1 + +# Set the entry-point to be the startup script +ENTRYPOINT ["/dynomite/startup.sh"] + +#RUN echo 'copy startup file...' +COPY scripts/startup.sh ./startup.sh +#RUN echo '... done' diff --git a/dynomite/scripts/startup.sh b/dynomite/scripts/startup.sh new file mode 100755 index 0000000..7f92a91 --- /dev/null +++ b/dynomite/scripts/startup.sh @@ -0,0 +1,31 @@ +#!/bin/bash + +# GENERATE a dynomite yaml configuration based on DYNO_NODE env. variable and 'seeds.list' file. + +NODE=${DYNO_NODE:-"dynomite:8101:rack-1:datacenter-1:0"} +IFS=':' read -r -a NODEandPORTandRACKandDATACENTERandTOKEN <<< "$NODE" + +echo "I am $NODE" + +{ + printf 'dyn_o_mite:\n' + printf ' datacenter: %s\n' "${NODEandPORTandRACKandDATACENTERandTOKEN[3]}" + printf ' rack: %s\n' "${NODEandPORTandRACKandDATACENTERandTOKEN[2]}" + printf ' dyn_listen: 0.0.0.0:8101\n' + printf ' listen: 0.0.0.0:8102\n' + printf ' dyn_seed_provider: simple_provider\n' + printf ' dyn_seeds:\n' + while IFS= read -r SEED_LINE; do + if [ "$SEED_LINE" != "$NODE" ]; then + printf ' - %s\n' "$SEED_LINE"; + fi + done < seeds.list + printf ' tokens: %s\n' "${NODEandPORTandRACKandDATACENTERandTOKEN[4]}" + printf ' servers:\n' + printf ' - 127.0.0.1:22122:1\n' +} > /dynomite/auto_dynomite.yml + +#Start redis server on 22122 +redis-server --port 22122 & + +src/dynomite --conf-file=/dynomite/auto_dynomite.yml -v11 diff --git a/stack/conductor-swarm-config.properties b/stack/conductor-swarm-config.properties new file mode 100644 index 0000000..751daee --- /dev/null +++ b/stack/conductor-swarm-config.properties @@ -0,0 +1,58 @@ +# Servers. +conductor.jetty.server.enabled=true +conductor.grpc.server.enabled=false + +# Database persistence model. Possible values are memory, redis, and dynomite. +# If ommitted, the persistence used is memory +# +# memory : The data is stored in memory and lost when the server dies. Useful for testing or demo +# redis : non-Dynomite based redis instance +# dynomite : Dynomite cluster. Use this for HA configuration. + +db=dynomite + +# Dynomite Cluster details. +# format is host:port:rack separated by semicolon +workflow.dynomite.cluster.hosts=dynomite1:8102:us-east-1b;dynomite2:8102:us-east-1b;dynomite3:8102:us-east-2b;dynomite4:8102:us-east-2b + +# Dynomite cluster name +workflow.dynomite.cluster.name=dyno1 + +# Namespace for the keys stored in Dynomite/Redis +workflow.namespace.prefix=conductor + +# Namespace prefix for the dyno queues +workflow.namespace.queue.prefix=conductor_queues + +# No. of threads allocated to dyno-queues (optional) +queues.dynomite.threads=10 + +# Non-quorum port used to connect to local redis. Used by dyno-queues. +# When using redis directly, set this to the same port as redis server +# For Dynomite, this is 22122 by default or the local redis-server port used by Dynomite. +queues.dynomite.nonQuorum.port=22122 + +# Elastic search instance type. Possible values are memory and external. +# If not specified, the instance type will be embedded in memory +# +# memory: The instance is created in memory and lost when the server dies. Useful for development and testing. +# external: Elastic search instance runs outside of the server. Data is persisted and does not get lost when +# the server dies. Useful for more stable environments like staging or production. +workflow.elasticsearch.instanceType=external + +# Transport address to elasticsearch +workflow.elasticsearch.url=elasticsearch:9300 + +# Name of the elasticsearch cluster +workflow.elasticsearch.index.name=conductor + +# Additional modules (optional) +# conductor.additional.modules=class_extending_com.google.inject.AbstractModule + +# Additional modules for metrics collection (optional) +# conductor.additional.modules=com.netflix.conductor.contribs.metrics.MetricsRegistryModule,com.netflix.conductor.contribs.metrics.LoggingMetricsModule +# com.netflix.conductor.contribs.metrics.LoggingMetricsModule.reportPeriodSeconds=15 + +# Load sample kitchen sink workflow +loadSample=false + diff --git a/stack/conductor-swarm.yaml b/stack/conductor-swarm.yaml new file mode 100644 index 0000000..0fffd21 --- /dev/null +++ b/stack/conductor-swarm.yaml @@ -0,0 +1,59 @@ +version: '3.6' + +services: + conductor-server: + environment: + - CONFIG_PROP=conductor-swarm-config.properties + image: nubisware/conductor-server + networks: + - conductor-network + ports: + - "8080:8080" + depends_on: + - elasticsearch + - dynomite1 + - dynomite2 + deploy: + mode: replicated + replicas: 2 + #endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + configs: + - source: swarm-config + target: /app/config/conductor-swarm-config.properties + + logging: + driver: "journald" + + conductor-ui: + environment: + - WF_SERVER=http://conductor-server:8080/api/ + image: nubisware/conductor-ui + networks: + - conductor-network + ports: + - "5000:5000" + deploy: + mode: replicated + replicas: 2 + #endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + +networks: + conductor-network: + +configs: + swarm-config: + file: ./conductor-swarm-config.properties diff --git a/stack/dynomite-swarm.yaml b/stack/dynomite-swarm.yaml new file mode 100644 index 0000000..55f57e3 --- /dev/null +++ b/stack/dynomite-swarm.yaml @@ -0,0 +1,101 @@ +version: '3.6' + +services: + dynomite1: + environment: + - DYNO_NODE=dynomite1:8101:rack-1:d4s:0 + image: nubisware/autodynomite:latest + networks: + conductor-network: + logging: + driver: "journald" + deploy: + mode: replicated + replicas: 1 + endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + configs: + - source: seeds.list + target: /dynomite/seeds.list + + dynomite2: + environment: + - DYNO_NODE=dynomite2:8101:rack-1:d4s:2147483647 + image: nubisware/autodynomite:latest + networks: + conductor-network: + logging: + driver: "journald" + deploy: + mode: replicated + replicas: 1 + endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + configs: + - source: seeds.list + target: /dynomite/seeds.list + + dynomite3: + environment: + - DYNO_NODE=dynomite3:8101:rack-3:d4s:0 + image: nubisware/autodynomite:latest + networks: + conductor-network: + logging: + driver: "journald" + deploy: + mode: replicated + replicas: 1 + endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + configs: + - source: seeds.list + target: /dynomite/seeds.list + + dynomite4: + environment: + - DYNO_NODE=dynomite4:8101:rack-2:d4s:2147483647 + image: nubisware/autodynomite:latest + networks: + conductor-network: + logging: + driver: "journald" + deploy: + mode: replicated + replicas: 1 + endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + configs: + - source: seeds.list + target: /dynomite/seeds.list + +networks: + conductor-network: + +configs: + seeds.list: + file: ./seeds.list diff --git a/stack/elasticsearch-swarm.yaml b/stack/elasticsearch-swarm.yaml new file mode 100644 index 0000000..9492b37 --- /dev/null +++ b/stack/elasticsearch-swarm.yaml @@ -0,0 +1,31 @@ +version: '3.6' + +services: + + elasticsearch: + image: docker.elastic.co/elasticsearch/elasticsearch:5.6.8 + environment: + - "ES_JAVA_OPTS=-Xms512m -Xmx512m" + - transport.host=0.0.0.0 + - discovery.type=single-node + - xpack.security.enabled=false + networks: + conductor-network: + aliases: + - es + logging: + driver: "journald" + deploy: + mode: replicated + replicas: 1 + #endpoint_mode: dnsrr + placement: + constraints: [node.role == worker] + restart_policy: + condition: on-failure + delay: 5s + max_attempts: 3 + window: 120s + +networks: + conductor-network: diff --git a/stack/seeds.list b/stack/seeds.list new file mode 100644 index 0000000..4fd7077 --- /dev/null +++ b/stack/seeds.list @@ -0,0 +1,4 @@ +dynomite1:8101:rack-1:d4s:0 +dynomite2:8101:rack-1:d4s:2147483647 +dynomite3:8101:rack-2:d4s:0 +dynomite4:8101:rack-2:d4s:2147483647