dnet-hadoop/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateMongoMdstoresApplica...

72 lines
2.4 KiB
Java

package eu.dnetlib.dhp.oa.graph.raw;
import java.io.Closeable;
import java.io.IOException;
import java.util.Map;
import java.util.Map.Entry;
import org.apache.commons.io.IOUtils;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import eu.dnetlib.dhp.application.ArgumentApplicationParser;
import eu.dnetlib.dhp.common.MdstoreClient;
import eu.dnetlib.dhp.oa.graph.raw.common.AbstractMigrationApplication;
public class MigrateMongoMdstoresApplication extends AbstractMigrationApplication implements Closeable {
private static final Logger log = LoggerFactory.getLogger(MigrateMongoMdstoresApplication.class);
private final MdstoreClient mdstoreClient;
public static void main(final String[] args) throws Exception {
final ArgumentApplicationParser parser = new ArgumentApplicationParser(
IOUtils
.toString(
MigrateMongoMdstoresApplication.class
.getResourceAsStream("/eu/dnetlib/dhp/oa/graph/migrate_mongo_mstores_parameters.json")));
parser.parseArgument(args);
final String mongoBaseUrl = parser.get("mongoBaseUrl");
final String mongoDb = parser.get("mongoDb");
final String mdFormat = parser.get("mdFormat");
final String mdLayout = parser.get("mdLayout");
final String mdInterpretation = parser.get("mdInterpretation");
final String hdfsPath = parser.get("hdfsPath");
try (MigrateMongoMdstoresApplication app = new MigrateMongoMdstoresApplication(hdfsPath, mongoBaseUrl,
mongoDb)) {
app.execute(mdFormat, mdLayout, mdInterpretation);
}
}
public MigrateMongoMdstoresApplication(
final String hdfsPath, final String mongoBaseUrl, final String mongoDb) throws Exception {
super(hdfsPath);
this.mdstoreClient = new MdstoreClient(mongoBaseUrl, mongoDb);
}
public void execute(final String format, final String layout, final String interpretation) {
final Map<String, String> colls = mdstoreClient.validCollections(format, layout, interpretation);
log.info("Found " + colls.size() + " mdstores");
for (final Entry<String, String> entry : colls.entrySet()) {
log.info("Processing mdstore " + entry.getKey() + " (collection: " + entry.getValue() + ")");
final String currentColl = entry.getValue();
for (final String xml : mdstoreClient.listRecords(currentColl)) {
emit(xml, String.format("%s-%s-%s", format, layout, interpretation));
}
}
}
@Override
public void close() throws IOException {
super.close();
mdstoreClient.close();
}
}