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changed because of D-Net/dnet-hadoop#61 (comment)

This commit is contained in:
Miriam Baglioni 2020-11-25 17:58:53 +01:00
parent 1df94b85b4
commit f5e5e92a10
1 changed files with 2 additions and 7 deletions
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9
dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump/funderresults/oozie_app/workflow.xml
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@ -121,7 +121,7 @@
<delete path="${outputPath}"/> <delete path="${outputPath}"/>
<mkdir path="${outputPath}"/> <mkdir path="${outputPath}"/>
</fs> </fs>
<ok to="make_archive"/> <ok to="save_community_map"/>
<error to="Kill"/> <error to="Kill"/>
</action> </action>
@ -274,7 +274,6 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/publication</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/publication</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/publication</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/publication</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/publication</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
@ -302,7 +301,6 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/dataset</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/dataset</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/dataset</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/dataset</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/dataset</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
@ -330,7 +328,6 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/otherresearchproduct</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/otherresearchproduct</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/otherresearchproduct</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/otherresearchproduct</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
@ -358,7 +355,6 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/software</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/software</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/software</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/software</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/software</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
@ -532,8 +528,7 @@
<main-class>eu.dnetlib.dhp.oa.graph.dump.MakeTar</main-class> <main-class>eu.dnetlib.dhp.oa.graph.dump.MakeTar</main-class>
<arg>--hdfsPath</arg><arg>${outputPath}</arg> <arg>--hdfsPath</arg><arg>${outputPath}</arg>
<arg>--nameNode</arg><arg>${nameNode}</arg> <arg>--nameNode</arg><arg>${nameNode}</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${workingDir}/resultperfunder</arg>--> <arg>--sourcePath</arg><arg>${workingDir}/resultperfunder</arg>
<arg>--sourcePath</arg><arg>/user/miriam.baglioni/graph_dump_whole_production_funder_results</arg>
</java> </java>
<ok to="should_upload"/> <ok to="should_upload"/>
<error to="Kill"/> <error to="Kill"/>