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dnet-hadoop
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fixed collectedFrom ID

This commit is contained in:
Michele Artini 2020-04-20 11:09:27 +02:00
parent 25307965d2
commit 8ff7facfa3
4 changed files with 504 additions and 510 deletions
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4
dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/AbstractMdRecordToOafMapper.java
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@ -80,11 +80,11 @@ public abstract class AbstractMdRecordToOafMapper {
final String type = doc.valueOf("//dr:CobjCategory/@type");
final KeyValue collectedFrom =
keyValue(doc.valueOf("//oaf:collectedFrom/@id"), doc.valueOf("//oaf:collectedFrom/@name"));
keyValue(createOpenaireId(10, doc.valueOf("//oaf:collectedFrom/@id"), true), doc.valueOf("//oaf:collectedFrom/@name"));
final KeyValue hostedBy =
StringUtils.isBlank(doc.valueOf("//oaf:hostedBy/@id"))
? collectedFrom
: keyValue(doc.valueOf("//oaf:hostedBy/@id"), doc.valueOf("//oaf:hostedBy/@name"));
: keyValue(createOpenaireId(10, doc.valueOf("//oaf:hostedBy/@id"), true), doc.valueOf("//oaf:hostedBy/@name"));
final DataInfo info = prepareDataInfo(doc);
final long lastUpdateTimestamp = new Date().getTime();

988
dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java
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File diff suppressed because it is too large Load Diff

5
dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java
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@ -51,6 +51,7 @@ public class MappersTest {
final Relation r2 = (Relation) list.get(2);
assertValidId(p.getId());
assertValidId(p.getCollectedfrom().get(0).getKey());
assertTrue(StringUtils.isNotBlank(p.getTitle().get(0).getValue()));
assertTrue(p.getAuthor().size() > 0);
assertTrue(p.getSubject().size() > 0);
@ -61,6 +62,8 @@ public class MappersTest {
assertValidId(r1.getTarget());
assertValidId(r2.getSource());
assertValidId(r2.getTarget());
assertValidId(r1.getCollectedFrom().get(0).getKey());
assertValidId(r2.getCollectedFrom().get(0).getKey());
assertNotNull(r1.getDataInfo());
assertNotNull(r2.getDataInfo());
assertNotNull(r1.getDataInfo().getTrust());
@ -92,6 +95,7 @@ public class MappersTest {
final Relation r2 = (Relation) list.get(2);
assertValidId(d.getId());
assertValidId(d.getCollectedfrom().get(0).getKey());
assertTrue(StringUtils.isNotBlank(d.getTitle().get(0).getValue()));
assertTrue(d.getAuthor().size() > 0);
assertTrue(d.getSubject().size() > 0);
@ -124,6 +128,7 @@ public class MappersTest {
final Software s = (Software) list.get(0);
assertValidId(s.getId());
assertValidId(s.getCollectedfrom().get(0).getKey());
assertTrue(StringUtils.isNotBlank(s.getTitle().get(0).getValue()));
assertTrue(s.getAuthor().size() > 0);
assertTrue(s.getSubject().size() > 0);

17
dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplicationTest.java
View File

@ -29,6 +29,7 @@ import eu.dnetlib.dhp.schema.oaf.Oaf;
import eu.dnetlib.dhp.schema.oaf.Organization;
import eu.dnetlib.dhp.schema.oaf.Project;
import eu.dnetlib.dhp.schema.oaf.Relation;
import eu.dnetlib.dhp.schema.oaf.Result;
@ExtendWith(MockitoExtension.class)
public class MigrateDbEntitiesApplicationTest {
@ -53,12 +54,12 @@ public class MigrateDbEntitiesApplicationTest {
final Datasource ds = (Datasource) list.get(0);
assertValidId(ds.getId());
assertValidId(ds.getCollectedfrom().get(0).getKey());
assertEquals(ds.getOfficialname().getValue(), getValueAsString("officialname", fields));
assertEquals(ds.getEnglishname().getValue(), getValueAsString("englishname", fields));
assertEquals(ds.getContactemail().getValue(), getValueAsString("contactemail", fields));
assertEquals(ds.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
assertEquals(ds.getNamespaceprefix().getValue(), getValueAsString("namespaceprefix", fields));
assertEquals(ds.getCollectedfrom().get(0).getKey(), getValueAsString("collectedfromid", fields));
assertEquals(ds.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
}
@ -72,10 +73,11 @@ public class MigrateDbEntitiesApplicationTest {
final Project p = (Project) list.get(0);
assertValidId(p.getId());
assertValidId(p.getCollectedfrom().get(0).getKey());
assertEquals(p.getAcronym().getValue(), getValueAsString("acronym", fields));
assertEquals(p.getTitle().getValue(), getValueAsString("title", fields));
assertEquals(p.getCollectedfrom().get(0).getKey(), getValueAsString("collectedfromid", fields));
assertEquals(p.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
}
@Test
@ -90,6 +92,7 @@ public class MigrateDbEntitiesApplicationTest {
final Organization o = (Organization) list.get(0);
assertValidId(o.getId());
assertValidId(o.getCollectedfrom().get(0).getKey());
assertEquals(o.getLegalshortname().getValue(), getValueAsString("legalshortname", fields));
assertEquals(o.getLegalname().getValue(), getValueAsString("legalname", fields));
assertEquals(o.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
@ -97,7 +100,6 @@ public class MigrateDbEntitiesApplicationTest {
assertEquals(o.getCountry().getClassname(), getValueAsString("country", fields).split("@@@")[1]);
assertEquals(o.getCountry().getSchemeid(), getValueAsString("country", fields).split("@@@")[2]);
assertEquals(o.getCountry().getSchemename(), getValueAsString("country", fields).split("@@@")[3]);
assertEquals(o.getCollectedfrom().get(0).getKey(), getValueAsString("collectedfromid", fields));
assertEquals(o.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
}
@ -133,6 +135,8 @@ public class MigrateDbEntitiesApplicationTest {
assertValidId(r2.getSource());
assertEquals(r1.getSource(), r2.getTarget());
assertEquals(r2.getSource(), r1.getTarget());
assertValidId(r1.getCollectedFrom().get(0).getKey());
assertValidId(r2.getCollectedFrom().get(0).getKey());
}
@Test
@ -142,8 +146,12 @@ public class MigrateDbEntitiesApplicationTest {
final List<Oaf> list = app.processClaims(rs);
assertEquals(1, list.size());
assertTrue(list.get(0) instanceof Result);
final Result r = (Result) list.get(0);
verifyMocks(fields);
assertValidId(r.getCollectedfrom().get(0).getKey());
}
@Test
@ -176,6 +184,9 @@ public class MigrateDbEntitiesApplicationTest {
assertTrue(StringUtils.isNotBlank(r1.getRelType()));
assertTrue(StringUtils.isNotBlank(r2.getRelType()));
assertValidId(r1.getCollectedFrom().get(0).getKey());
assertValidId(r2.getCollectedFrom().get(0).getKey());
// System.out.println(new ObjectMapper().writeValueAsString(r1));
// System.out.println(new ObjectMapper().writeValueAsString(r2));
}