package eu.eudat.controllers; import eu.eudat.configurations.dynamicgrant.DynamicGrantConfiguration; import eu.eudat.criteria.DMPCriteria; import eu.eudat.data.dao.criteria.DynamicFieldsCriteria; import eu.eudat.data.dao.criteria.RequestItem; import eu.eudat.data.entities.DMP; import eu.eudat.data.entities.Dataset; import eu.eudat.data.query.items.table.datasetprofile.DatasetProfileTableRequestItem; import eu.eudat.data.query.items.table.dmp.DataManagementPlanTableRequest; import eu.eudat.data.query.items.table.dmp.DataManagmentPlanPublicTableRequest; import eu.eudat.exceptions.datamanagementplan.DMPNewVersionException; import eu.eudat.exceptions.datamanagementplan.DMPWithDatasetsDeleteException; import eu.eudat.exceptions.security.UnauthorisedException; import eu.eudat.logic.managers.DataManagementPlanManager; import eu.eudat.logic.managers.DatasetManager; import eu.eudat.logic.proxy.config.configloaders.ConfigLoader; import eu.eudat.logic.security.claims.ClaimedAuthorities; import eu.eudat.logic.services.ApiContext; import eu.eudat.logic.services.operations.DatabaseRepository; import eu.eudat.logic.utilities.documents.helpers.FileEnvelope; import eu.eudat.models.data.datasetprofile.DatasetProfileListingModel; import eu.eudat.models.data.datasetwizard.DatasetsToBeFinalized; import eu.eudat.models.data.dmp.DataManagementPlan; import eu.eudat.models.data.helpermodels.Tuple; import eu.eudat.models.data.helpers.common.DataTableData; import eu.eudat.models.data.helpers.responses.ResponseItem; import eu.eudat.models.data.listingmodels.DataManagementPlanListingModel; import eu.eudat.models.data.listingmodels.DataManagementPlanOverviewModel; import eu.eudat.models.data.security.Principal; import eu.eudat.query.DMPQuery; import eu.eudat.types.ApiMessageCode; import eu.eudat.types.Authorities; import org.slf4j.Logger; import org.slf4j.LoggerFactory; import org.springframework.beans.factory.annotation.Autowired; import org.springframework.core.env.Environment; import org.springframework.http.HttpHeaders; import org.springframework.http.HttpStatus; import org.springframework.http.MediaType; import org.springframework.http.ResponseEntity; import org.springframework.transaction.annotation.Transactional; import org.springframework.web.bind.annotation.*; import org.springframework.web.multipart.MultipartFile; import javax.activation.MimetypesFileTypeMap; import javax.validation.Valid; import java.io.File; import java.io.FileInputStream; import java.io.IOException; import java.io.InputStream; import java.nio.file.Files; import java.util.List; import java.util.Map; import java.util.UUID; import static org.springframework.http.MediaType.APPLICATION_ATOM_XML; import static org.springframework.http.MediaType.APPLICATION_JSON; @RestController @CrossOrigin @RequestMapping(value = {"/api/dmps/"}) public class DMPs extends BaseController { private static final Logger logger = LoggerFactory.getLogger(DMPs.class); private DynamicGrantConfiguration dynamicGrantConfiguration; private Environment environment; private DataManagementPlanManager dataManagementPlanManager; private DatasetManager datasetManager; private ConfigLoader configLoader; @Autowired public DMPs(ApiContext apiContext, DynamicGrantConfiguration dynamicGrantConfiguration, Environment environment, DataManagementPlanManager dataManagementPlanManager, DatasetManager datasetManager, ConfigLoader configLoader) { super(apiContext); this.dynamicGrantConfiguration = dynamicGrantConfiguration; this.environment = environment; this.dataManagementPlanManager = dataManagementPlanManager; this.datasetManager = datasetManager; this.configLoader = configLoader; } /* * Data Retrieval * */ @RequestMapping(method = RequestMethod.POST, value = {"/paged"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity>> getPaged(@Valid @RequestBody DataManagementPlanTableRequest dataManagementPlanTableRequest, @RequestParam String fieldsGroup, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) throws Exception { DataTableData dataTable = this.dataManagementPlanManager.getPaged(dataManagementPlanTableRequest, principal, fieldsGroup); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable)); } @RequestMapping(method = RequestMethod.GET, value = {"{id}"}) public @ResponseBody ResponseEntity getSingle(@PathVariable String id, @RequestHeader("Content-Type") String contentType, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) throws Exception { if (contentType.equals("application/xml") || contentType.equals("application/msword")) { return this.dataManagementPlanManager.getDocument(id, contentType, principal, this.configLoader); } else { eu.eudat.models.data.dmp.DataManagementPlan dataManagementPlan = this.dataManagementPlanManager.getSingle(id, principal, false); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE).payload(dataManagementPlan)); } } @RequestMapping(method = RequestMethod.POST, value = {"/datasetProfilesUsedByDmps/paged"}, produces = "application/json") public @ResponseBody ResponseEntity>> getUsingDatasetProfilesPaged(@RequestBody DatasetProfileTableRequestItem datasetProfileTableRequestItem, Principal principal) { DataTableData datasetProfileTableData = this.dataManagementPlanManager.getDatasetProfilesUsedByDMP(datasetProfileTableRequestItem, principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem>().status(ApiMessageCode.NO_MESSAGE).payload(datasetProfileTableData)); } @RequestMapping(method = RequestMethod.GET, value = {"/overview/{id}"}) public @ResponseBody ResponseEntity getOverviewSingle(@PathVariable String id,@ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) { try { DataManagementPlanOverviewModel dataManagementPlan = this.dataManagementPlanManager.getOverviewSingle(id, principal, false); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE).payload(dataManagementPlan)); } catch (Exception e) { if (e instanceof UnauthorisedException) { return ResponseEntity.status(HttpStatus.FORBIDDEN).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE)); } else { return ResponseEntity.status(HttpStatus.NOT_FOUND).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE)); } } } @RequestMapping(method = RequestMethod.GET, value = {"/public/{id}"}) public @ResponseBody ResponseEntity getSinglePublic(@PathVariable String id, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) throws Exception { // try { eu.eudat.models.data.dmp.DataManagementPlan dataManagementPlan = this.dataManagementPlanManager.getSingle(id, principal, true); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE).payload(dataManagementPlan)); // } catch (Exception ex) { // return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE).message(ex.getMessage())); // } } @RequestMapping(method = RequestMethod.GET, value = {"/publicOverview/{id}"}) public @ResponseBody ResponseEntity getOverviewSinglePublic(@PathVariable String id, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) throws Exception { // try { DataManagementPlanOverviewModel dataManagementPlan = this.dataManagementPlanManager.getOverviewSingle(id, principal, true); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE).payload(dataManagementPlan)); // } catch (Exception ex) { // return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE).message(ex.getMessage())); // } } @RequestMapping(method = RequestMethod.POST, value = {"/dynamic"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity>>> getWithCriteria(@RequestBody RequestItem criteriaRequestItem, Principal principal) throws InstantiationException, IllegalAccessException { List> dataTable = this.dataManagementPlanManager.getDynamicFields(criteriaRequestItem.getCriteria().getId(), this.dynamicGrantConfiguration, criteriaRequestItem.getCriteria()); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem>>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable)); } /* * Data Export * */ @RequestMapping(method = RequestMethod.GET, value = {"rda/{id}"}) public @ResponseBody ResponseEntity getRDAJsonDocument(@PathVariable String id, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) throws IOException { return this.dataManagementPlanManager.getRDAJsonDocument(id, datasetManager, principal); } @RequestMapping(method = RequestMethod.GET, value = {"/getPDF/{id}"}) public @ResponseBody ResponseEntity getPDFDocument(@PathVariable String id, @RequestHeader("Content-Type") String contentType, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal) throws IllegalAccessException, IOException, InstantiationException, InterruptedException { FileEnvelope file = this.dataManagementPlanManager.getWordDocument(id, principal, configLoader); String name = file.getFilename().substring(0, file.getFilename().length() - 5); File pdffile = datasetManager.convertToPDF(file, environment); InputStream resource = new FileInputStream(pdffile); logger.info("Mime Type of " + name + " is " + new MimetypesFileTypeMap().getContentType(file.getFile())); HttpHeaders responseHeaders = new HttpHeaders(); responseHeaders.setContentLength(pdffile.length()); responseHeaders.setContentType(MediaType.APPLICATION_OCTET_STREAM); responseHeaders.set("Content-Disposition", "attachment;filename=" + name + ".pdf"); responseHeaders.set("Access-Control-Expose-Headers", "Content-Disposition"); responseHeaders.get("Access-Control-Expose-Headers").add("Content-Type"); byte[] content = org.apache.poi.util.IOUtils.toByteArray(resource); resource.close(); Files.deleteIfExists(file.getFile().toPath()); Files.deleteIfExists(pdffile.toPath()); return new ResponseEntity<>(content, responseHeaders, HttpStatus.OK); } /* * Data Management * */ @Transactional @RequestMapping(method = RequestMethod.POST, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity> createOrUpdate(@RequestBody eu.eudat.models.data.dmp.DataManagementPlanEditorModel dataManagementPlanEditorModel, Principal principal) throws Exception { DMP dmp = this.dataManagementPlanManager.createOrUpdate(this.getApiContext(), dataManagementPlanEditorModel, principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Created").payload(dmp.getId())); } @RequestMapping(method = RequestMethod.POST, value = {"/new/{id}"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity> newVersion(@PathVariable UUID id, @Valid @RequestBody eu.eudat.models.data.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception { try { this.dataManagementPlanManager.newVersion(id, dataManagementPlan, principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.NO_MESSAGE)); } catch (DMPNewVersionException exception) { return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE).message(exception.getMessage())); } } @RequestMapping(method = RequestMethod.POST, value = {"/clone/{id}"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity> clone(@PathVariable UUID id, @RequestBody eu.eudat.models.data.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception { this.dataManagementPlanManager.clone(dataManagementPlan, principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE)); } @Transactional @RequestMapping(method = RequestMethod.DELETE, value = {"{id}"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity> delete(@PathVariable UUID id, Principal principal) { try { this.dataManagementPlanManager.delete(id); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Deleted Datamanagement Plan")); } catch (DMPWithDatasetsDeleteException | IOException exception) { return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE).message(exception.getMessage())); } } @RequestMapping(method = RequestMethod.POST, value = {"/upload"}) public ResponseEntity dmpUpload(@RequestParam("file") MultipartFile[] files, @RequestParam("profiles")String[] profiles, Principal principal) throws Exception { if (files[0].getContentType().equals(APPLICATION_JSON.toString())) { this.dataManagementPlanManager.createFromRDA(files, principal, profiles); } else if (files[0].getContentType().equals(APPLICATION_ATOM_XML.toString())) { this.dataManagementPlanManager.createDmpFromXml(this.getApiContext(), files, principal); } return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem() .status(ApiMessageCode.SUCCESS_MESSAGE)); } @RequestMapping(method = RequestMethod.GET, value = {"/makepublic/{id}"}) public ResponseEntity> makePublic(@PathVariable String id, Principal principal) { try { this.dataManagementPlanManager.makePublic(UUID.fromString(id), principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Data Datamanagement Plan made public.")); } catch (Exception e) { return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE).message(e.getMessage())); } } @Transactional @RequestMapping(method = RequestMethod.POST, value = {"/finalize/{id}"}) public ResponseEntity> makeFinalize(@PathVariable String id, Principal principal, @RequestBody DatasetsToBeFinalized datasetsToBeFinalized) { try { this.dataManagementPlanManager.makeFinalize(UUID.fromString(id), principal, datasetsToBeFinalized); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Data Datamanagement Plan made finalized.")); } catch (Exception e) { return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE).message(e.getMessage())); } } @Transactional @RequestMapping(method = RequestMethod.POST, value = {"/unfinalize/{id}"}) public ResponseEntity> undoFinalize(@PathVariable String id, Principal principal) { try { this.dataManagementPlanManager.undoFinalize(UUID.fromString(id), principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Data Datamanagement Plan made active.")); } catch (Exception e) { return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE).message(e.getMessage())); } } /* * DOI Generation * */ @Transactional @RequestMapping(method = RequestMethod.POST, value = {"/createZenodoDoi/{id}"}) public ResponseEntity> createZenodoDoi(@PathVariable String id, Principal principal) { try { String zenodoDOI = this.dataManagementPlanManager.createZenodoDoi(UUID.fromString(id), principal, configLoader); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully created DOI for Data Datamanagement Plan in question.").payload(zenodoDOI)); } catch (Exception e) { logger.error(e.getMessage(), e); return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem().status(ApiMessageCode.ERROR_MESSAGE).message(e.getMessage())); } } /* * Data Index * */ @Transactional @RequestMapping(method = RequestMethod.POST, value = {"/index"}) public @ResponseBody ResponseEntity> generateIndex(Principal principal) throws Exception { this.dataManagementPlanManager.generateIndex(principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Generated").payload(null)); } @Transactional @RequestMapping(method = RequestMethod.DELETE, value = {"/index"}) public @ResponseBody ResponseEntity> clearIndex(Principal principal) throws Exception { this.dataManagementPlanManager.clearIndex(principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Cleared").payload(null)); } /* * Misc * */ @RequestMapping(method = RequestMethod.POST, value = {"/test"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity>> test(@RequestBody DMPCriteria criteria, @ClaimedAuthorities(claims = {Authorities.ANONYMOUS}) Principal principal) throws Exception { DatabaseRepository dbRepo = this.getApiContext().getOperationsContext().getDatabaseRepository(); DMPQuery query = criteria.buildQuery(dbRepo); List models = query.getQuery().toListWithFields(); DataTableData dmp = new DataTableData<>(); dmp.setData(models); dmp.setTotalCount(query.getQuery().count()); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem>().status(ApiMessageCode.NO_MESSAGE).payload(dmp)); } /*@RequestMapping(method = RequestMethod.POST, value = {"/public/paged"}, consumes = "application/json", produces = "application/json") public @ResponseBody ResponseEntity>> getPublicPaged(@RequestBody DataManagmentPlanPublicTableRequest dmpTableRequest, @ClaimedAuthorities(claims = {Authorities.ADMIN, Authorities.MANAGER, Authorities.USER, Authorities.ANONYMOUS}) Principal principal, @RequestParam String fieldsGroup) throws Exception { DataTableData dmp = this.dataManagementPlanManager.getPublicPaged(dmpTableRequest, fieldsGroup, principal); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem>().status(ApiMessageCode.NO_MESSAGE).payload(dmp)); }*/ /*@Transactional @RequestMapping(method = RequestMethod.GET, value = {"{id}/unlock"}, produces = "application/json") public @ResponseBody ResponseEntity> unlock(@PathVariable(value = "id") UUID id, Principal principal) throws Exception { this.dataManagementPlanManager.unlock(id); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem().status(ApiMessageCode.SUCCESS_MESSAGE).message("Unlocked")); }*/ }