commit 9f8b4a3cce3197cd4181c0da9ca4184063501c1e Author: Nikolaos Laskaris Date: Thu Sep 14 13:37:36 2017 +0300 Initial import of DMP project modules. 1) dmp-backend : spring-hibernate webservice which allows dmp data storing and fetching from a relational database. 2) dmp-javascript-engine: a simple wrapper for java's nashorn javascript engine. 3) dmp-frontend: an angular based frontend app to serve dynamic questionnaires to aid the formation of Digital Management Plans diff --git a/dmp-backend/.classpath b/dmp-backend/.classpath new file mode 100644 index 000000000..6b533711d --- /dev/null +++ b/dmp-backend/.classpath @@ -0,0 +1,37 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/dmp-backend/.gitignore b/dmp-backend/.gitignore new file mode 100644 index 000000000..b83d22266 --- /dev/null +++ b/dmp-backend/.gitignore @@ -0,0 +1 @@ +/target/ diff --git a/dmp-backend/.project b/dmp-backend/.project new file mode 100644 index 000000000..bcfc37cda --- /dev/null +++ b/dmp-backend/.project @@ -0,0 +1,36 @@ + + + dmp-backend + + + + + + org.eclipse.wst.common.project.facet.core.builder + + + + + org.eclipse.jdt.core.javabuilder + + + + + org.eclipse.wst.validation.validationbuilder + + + + + org.eclipse.m2e.core.maven2Builder + + + + + + org.eclipse.jem.workbench.JavaEMFNature + org.eclipse.wst.common.modulecore.ModuleCoreNature + org.eclipse.m2e.core.maven2Nature + org.eclipse.jdt.core.javanature + org.eclipse.wst.common.project.facet.core.nature + + diff --git a/dmp-backend/.settings/.jsdtscope b/dmp-backend/.settings/.jsdtscope new file mode 100644 index 000000000..f179e11ea --- /dev/null +++ b/dmp-backend/.settings/.jsdtscope @@ -0,0 +1,13 @@ + + + + + + + + + + + + + diff --git a/dmp-backend/.settings/org.eclipse.core.resources.prefs b/dmp-backend/.settings/org.eclipse.core.resources.prefs new file mode 100644 index 000000000..5b781ec6d --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.core.resources.prefs @@ -0,0 +1,3 @@ +eclipse.preferences.version=1 +encoding//src/main/java=UTF-8 +encoding//src/test/java=UTF-8 diff --git a/dmp-backend/.settings/org.eclipse.jdt.core.prefs b/dmp-backend/.settings/org.eclipse.jdt.core.prefs new file mode 100644 index 000000000..6e80039d3 --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.jdt.core.prefs @@ -0,0 +1,8 @@ +eclipse.preferences.version=1 +org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled +org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8 +org.eclipse.jdt.core.compiler.compliance=1.8 +org.eclipse.jdt.core.compiler.problem.assertIdentifier=error +org.eclipse.jdt.core.compiler.problem.enumIdentifier=error +org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning +org.eclipse.jdt.core.compiler.source=1.8 diff --git a/dmp-backend/.settings/org.eclipse.jpt.core.prefs b/dmp-backend/.settings/org.eclipse.jpt.core.prefs new file mode 100644 index 000000000..7ff33762c --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.jpt.core.prefs @@ -0,0 +1,3 @@ +eclipse.preferences.version=1 +org.eclipse.jpt.core.platform=generic2_1 +org.eclipse.jpt.jpa.core.discoverAnnotatedClasses=true diff --git a/dmp-backend/.settings/org.eclipse.m2e.core.prefs b/dmp-backend/.settings/org.eclipse.m2e.core.prefs new file mode 100644 index 000000000..f897a7f1c --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.m2e.core.prefs @@ -0,0 +1,4 @@ +activeProfiles= +eclipse.preferences.version=1 +resolveWorkspaceProjects=true +version=1 diff --git a/dmp-backend/.settings/org.eclipse.wst.common.component b/dmp-backend/.settings/org.eclipse.wst.common.component new file mode 100644 index 000000000..319e1de6c --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.wst.common.component @@ -0,0 +1,10 @@ + + + + + + + + + + diff --git a/dmp-backend/.settings/org.eclipse.wst.common.project.facet.core.prefs.xml b/dmp-backend/.settings/org.eclipse.wst.common.project.facet.core.prefs.xml new file mode 100644 index 000000000..7961132fd --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.wst.common.project.facet.core.prefs.xml @@ -0,0 +1,7 @@ + + + + + + + diff --git a/dmp-backend/.settings/org.eclipse.wst.common.project.facet.core.xml b/dmp-backend/.settings/org.eclipse.wst.common.project.facet.core.xml new file mode 100644 index 000000000..41fc032d2 --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.wst.common.project.facet.core.xml @@ -0,0 +1,8 @@ + + + + + + + + diff --git a/dmp-backend/.settings/org.eclipse.wst.jsdt.ui.superType.container b/dmp-backend/.settings/org.eclipse.wst.jsdt.ui.superType.container new file mode 100644 index 000000000..3bd5d0a48 --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.wst.jsdt.ui.superType.container @@ -0,0 +1 @@ +org.eclipse.wst.jsdt.launching.baseBrowserLibrary \ No newline at end of file diff --git a/dmp-backend/.settings/org.eclipse.wst.jsdt.ui.superType.name b/dmp-backend/.settings/org.eclipse.wst.jsdt.ui.superType.name new file mode 100644 index 000000000..05bd71b6e --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.wst.jsdt.ui.superType.name @@ -0,0 +1 @@ +Window \ No newline at end of file diff --git a/dmp-backend/.settings/org.eclipse.wst.validation.prefs b/dmp-backend/.settings/org.eclipse.wst.validation.prefs new file mode 100644 index 000000000..04cad8cb7 --- /dev/null +++ b/dmp-backend/.settings/org.eclipse.wst.validation.prefs @@ -0,0 +1,2 @@ +disabled=06target +eclipse.preferences.version=1 diff --git a/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/MANIFEST.MF b/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/MANIFEST.MF new file mode 100644 index 000000000..d28f26524 --- /dev/null +++ b/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/MANIFEST.MF @@ -0,0 +1,5 @@ +Manifest-Version: 1.0 +Built-By: nikolas +Build-Jdk: 1.8.0_91 +Created-By: Maven Integration for Eclipse + diff --git a/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/maven/dmp-backend/dmp-backend/pom.properties b/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/maven/dmp-backend/dmp-backend/pom.properties new file mode 100644 index 000000000..09860bfe1 --- /dev/null +++ b/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/maven/dmp-backend/dmp-backend/pom.properties @@ -0,0 +1,7 @@ +#Generated by Maven Integration for Eclipse +#Thu Sep 14 13:20:15 EEST 2017 +version=0.0.1-SNAPSHOT +groupId=dmp-backend +m2e.projectName=dmp-backend +m2e.projectLocation=/home/nikolas/git/OpenAIRE-EUDAT-DMP-service-pilot/dmp-backend +artifactId=dmp-backend diff --git a/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/maven/dmp-backend/dmp-backend/pom.xml b/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/maven/dmp-backend/dmp-backend/pom.xml new file mode 100644 index 000000000..a81d94abd --- /dev/null +++ b/dmp-backend/home/nikolas/git/DMP/dmp-backend/target/m2e-wtp/web-resources/META-INF/maven/dmp-backend/dmp-backend/pom.xml @@ -0,0 +1,254 @@ + + + 4.0.0 + dmp-backend + dmp-backend + 0.0.1-SNAPSHOT + war + + + + 0.0.1-SNAPSHOT + 4.3.8.RELEASE + 1.19.1 + 7.0.35 + 5.2.9.Final + 1.9 + 4.11 + 1.2.17 + 1.7.12 + 9.0.7.v20131107 + 1.1.1 + 1 + 3.0.1 + + + + + + + + + + + + + + + org.hibernate + hibernate-core + ${hibernate.version} + + + + org.hibernate + hibernate-c3p0 + ${hibernate.version} + + + + + + + javax.servlet + javax.servlet-api + ${javax.servlet.servlet-api.version} + provided + + + + org.springframework + spring-core + ${org.springframework.version} + + + + org.springframework + spring-aop + ${org.springframework.version} + + + org.springframework + spring-tx + ${org.springframework.version} + + + + + + org.springframework + spring-orm + ${org.springframework.version} + + + + org.springframework + spring-webmvc + ${org.springframework.version} + + + + + org.springframework.security + spring-security-core + 4.2.3.RELEASE + + + + org.springframework.security + spring-security-web + 4.2.3.RELEASE + + + + org.springframework.security + spring-security-config + 4.2.3.RELEASE + + + + javax.servlet + jstl + 1.2 + + + + commons-fileupload + commons-fileupload + 1.2.1 + + + + + com.fasterxml.jackson.core + jackson-annotations + 2.8.4 + + + com.fasterxml.jackson.core + jackson-core + 2.8.4 + + + com.fasterxml.jackson.core + jackson-databind + 2.8.4 + + + + + + + org.json + json + 20160810 + + + + + + org.apache.tomcat + tomcat-jdbc + ${org.apache.tomcat.tomcat-jdbc.version} + provided + + + + junit + junit + ${org.junit.version} + test + + + + + org.postgresql + postgresql + 9.4.1212 + + + + + + log4j + log4j + ${log4j.version} + + + + commons-codec + commons-codec + ${commons-codec.version} + + + + + + org.slf4j + jcl-over-slf4j + ${slf4j.version} + runtime + + + org.slf4j + slf4j-log4j12 + ${slf4j.version} + runtime + + + log4j + log4j + ${log4j.version} + runtime + + + + + org.apache.commons + commons-lang3 + 3.5 + + + + + + + + + + + org.apache.maven.plugins + maven-compiler-plugin + 3.1 + + 1.8 + 1.8 + UTF-8 + + + + + + org.apache.maven.plugins + maven-dependency-plugin + 2.10 + + + analyze + + analyze-only + + + false + + + + + + + + ${project.artifactId} + + + \ No newline at end of file diff --git a/dmp-backend/home/nikolas/workspace-dmp/dmp-backend/target/m2e-wtp/web-resources/.gitignore b/dmp-backend/home/nikolas/workspace-dmp/dmp-backend/target/m2e-wtp/web-resources/.gitignore new file mode 100644 index 000000000..3385916da --- /dev/null +++ b/dmp-backend/home/nikolas/workspace-dmp/dmp-backend/target/m2e-wtp/web-resources/.gitignore @@ -0,0 +1 @@ +/META-INF/ diff --git a/dmp-backend/pom.xml b/dmp-backend/pom.xml new file mode 100644 index 000000000..a81d94abd --- /dev/null +++ b/dmp-backend/pom.xml @@ -0,0 +1,254 @@ + + + 4.0.0 + dmp-backend + dmp-backend + 0.0.1-SNAPSHOT + war + + + + 0.0.1-SNAPSHOT + 4.3.8.RELEASE + 1.19.1 + 7.0.35 + 5.2.9.Final + 1.9 + 4.11 + 1.2.17 + 1.7.12 + 9.0.7.v20131107 + 1.1.1 + 1 + 3.0.1 + + + + + + + + + + + + + + + org.hibernate + hibernate-core + ${hibernate.version} + + + + org.hibernate + hibernate-c3p0 + ${hibernate.version} + + + + + + + javax.servlet + javax.servlet-api + ${javax.servlet.servlet-api.version} + provided + + + + org.springframework + spring-core + ${org.springframework.version} + + + + org.springframework + spring-aop + ${org.springframework.version} + + + org.springframework + spring-tx + ${org.springframework.version} + + + + + + org.springframework + spring-orm + ${org.springframework.version} + + + + org.springframework + spring-webmvc + ${org.springframework.version} + + + + + org.springframework.security + spring-security-core + 4.2.3.RELEASE + + + + org.springframework.security + spring-security-web + 4.2.3.RELEASE + + + + org.springframework.security + spring-security-config + 4.2.3.RELEASE + + + + javax.servlet + jstl + 1.2 + + + + commons-fileupload + commons-fileupload + 1.2.1 + + + + + com.fasterxml.jackson.core + jackson-annotations + 2.8.4 + + + com.fasterxml.jackson.core + jackson-core + 2.8.4 + + + com.fasterxml.jackson.core + jackson-databind + 2.8.4 + + + + + + + org.json + json + 20160810 + + + + + + org.apache.tomcat + tomcat-jdbc + ${org.apache.tomcat.tomcat-jdbc.version} + provided + + + + junit + junit + ${org.junit.version} + test + + + + + org.postgresql + postgresql + 9.4.1212 + + + + + + log4j + log4j + ${log4j.version} + + + + commons-codec + commons-codec + ${commons-codec.version} + + + + + + org.slf4j + jcl-over-slf4j + ${slf4j.version} + runtime + + + org.slf4j + slf4j-log4j12 + ${slf4j.version} + runtime + + + log4j + log4j + ${log4j.version} + runtime + + + + + org.apache.commons + commons-lang3 + 3.5 + + + + + + + + + + + org.apache.maven.plugins + maven-compiler-plugin + 3.1 + + 1.8 + 1.8 + UTF-8 + + + + + + org.apache.maven.plugins + maven-dependency-plugin + 2.10 + + + analyze + + analyze-only + + + false + + + + + + + + ${project.artifactId} + + + \ No newline at end of file diff --git a/dmp-backend/src/main/java/controller/UIController.java b/dmp-backend/src/main/java/controller/UIController.java new file mode 100644 index 000000000..f2abddd96 --- /dev/null +++ b/dmp-backend/src/main/java/controller/UIController.java @@ -0,0 +1,35 @@ +package controller; + +import java.util.List; + +import org.springframework.beans.factory.annotation.Autowired; +import org.springframework.context.annotation.Configuration; +import org.springframework.http.HttpStatus; +import org.springframework.http.ResponseEntity; +import org.springframework.stereotype.Controller; +import org.springframework.ui.ModelMap; +import org.springframework.web.bind.annotation.PathVariable; +import org.springframework.web.bind.annotation.RequestMapping; +import org.springframework.web.bind.annotation.RequestMethod; +import org.springframework.web.servlet.ModelAndView; +import org.springframework.web.servlet.config.annotation.EnableWebMvc; + +import com.fasterxml.jackson.core.JsonProcessingException; +import com.fasterxml.jackson.databind.ObjectMapper; + +import dao.entities.DMPDao; +import entities.DMP; + + +@Controller +public class UIController { + + @Autowired private DMPDao dMPDao; + + @RequestMapping(value = "/home", method = RequestMethod.GET) + public String printWelcome(ModelMap model) { + model.addAttribute("DMPs", dMPDao.getAll()); + return "home"; + } + +} diff --git a/dmp-backend/src/main/java/dao/Dao.java b/dmp-backend/src/main/java/dao/Dao.java new file mode 100644 index 000000000..d497d52ab --- /dev/null +++ b/dmp-backend/src/main/java/dao/Dao.java @@ -0,0 +1,17 @@ +package dao; + +import java.io.Serializable; +import java.util.List; + +public interface Dao { + public T create(T t); + public T read(PK id); + public T update(T t); + public void delete(T t); + + public List getAll(); + public long count(); + + public T loadDetails(T t); + public boolean isLoaded(T t); +} diff --git a/dmp-backend/src/main/java/dao/DaoFactory.java b/dmp-backend/src/main/java/dao/DaoFactory.java new file mode 100644 index 000000000..90818044f --- /dev/null +++ b/dmp-backend/src/main/java/dao/DaoFactory.java @@ -0,0 +1,10 @@ +package dao; + +import java.util.Map; + + +public interface DaoFactory +{ + public Dao getDao(Class type) throws Exception; + public void overrideMappings(Map mappings) throws Exception; +} diff --git a/dmp-backend/src/main/java/dao/DaoI.java b/dmp-backend/src/main/java/dao/DaoI.java new file mode 100644 index 000000000..d47fbf547 --- /dev/null +++ b/dmp-backend/src/main/java/dao/DaoI.java @@ -0,0 +1,20 @@ +package dao; + +import java.io.Serializable; +import java.util.List; + + +public interface DaoI { + public void persist(T entity); + + public void update(T entity); + + public T findById(Id id); + + public void delete(T entity); + + public List findAll(); + + public void deleteAll(); +} + diff --git a/dmp-backend/src/main/java/dao/JpaDao.java b/dmp-backend/src/main/java/dao/JpaDao.java new file mode 100644 index 000000000..38ac604e3 --- /dev/null +++ b/dmp-backend/src/main/java/dao/JpaDao.java @@ -0,0 +1,80 @@ +package dao; + + +import java.io.Serializable; +import java.lang.reflect.ParameterizedType; +import java.util.ArrayList; +import java.util.List; + +import javax.annotation.PostConstruct; +import javax.persistence.EntityManager; +import javax.persistence.PersistenceContext; +import javax.persistence.PersistenceUnitUtil; + +import org.springframework.transaction.annotation.Transactional; + +public abstract class JpaDao implements Dao { + protected Class entityClass; + + // protected static EntityManagerFactory entityManagerFactory = null; + + @PersistenceContext + protected EntityManager entityManager; + + protected PersistenceUnitUtil persistenceUnitUtil; + + // public static void setEntityManagerFactory(EntityManagerFactory factory) + // { + // entityManagerFactory = factory; + // } + + public JpaDao() { + ParameterizedType genericSuperclass = (ParameterizedType) getClass().getGenericSuperclass(); + this.entityClass = (Class) genericSuperclass.getActualTypeArguments()[0]; + // entityManager = entityManagerFactory.createEntityManager(); + } + + @PostConstruct + private void initPersistenceUnitUtil() { + this.persistenceUnitUtil = entityManager.getEntityManagerFactory().getPersistenceUnitUtil(); + } + + @Transactional + public T create(T t) { + entityManager.persist(t); + return t; + } + + @Transactional(readOnly = true) + public T read(PK id) { + return entityManager.find(entityClass, id); + } + + @Transactional + public T update(T t) { + return entityManager.merge(t); + } + + @Transactional + public void delete(T t) { + t = entityManager.merge(t); + entityManager.remove(t); + } + + public List getAll() { + List result = entityManager.createQuery("from " + entityClass.getSimpleName(), entityClass).getResultList(); + return result == null ? new ArrayList() : result; + } + + public long count() { + return ((Number) entityManager.createQuery("select count(e) from " + entityClass.getSimpleName() + " e").getSingleResult()).longValue(); + } + + public boolean isLoaded(T t) { + return persistenceUnitUtil.isLoaded(t); + } + + protected boolean isFieldLoaded(T t, String fieldName) { + return persistenceUnitUtil.isLoaded(t, fieldName); + } +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/JpaDaoFactory.java b/dmp-backend/src/main/java/dao/JpaDaoFactory.java new file mode 100644 index 000000000..053ed84c1 --- /dev/null +++ b/dmp-backend/src/main/java/dao/JpaDaoFactory.java @@ -0,0 +1,84 @@ +package dao; + +import java.util.HashMap; +import java.util.Map; + +import dao.entities.DMPDaoImpl; +import dao.entities.DMPProfileDaoImpl; +import dao.entities.DMPResearcherDaoImpl; +import dao.entities.DataRepositoryDaoImpl; +import dao.entities.DatasetDaoImpl; +import dao.entities.DatasetProfileDaoImpl; +import dao.entities.DatasetProfileRulesetDaoImpl; +import dao.entities.DatasetProfileViewstyleDaoImpl; +import dao.entities.DatasetRegistryDaoImpl; +import dao.entities.DatasetServiceDaoImpl; +import dao.entities.OrganisationDaoImpl; +import dao.entities.ProjectDaoImpl; +import dao.entities.RegistryDaoImpl; +import dao.entities.ResearcherDaoImpl; +import dao.entities.ServiceDaoImpl; +import entities.DMP; +import entities.DMPProfile; +import entities.DMPResearcher; +import entities.DataRepository; +import entities.Dataset; +import entities.DatasetProfile; +import entities.DatasetProfileRuleset; +import entities.DatasetProfileViewstyle; +import entities.DatasetRegistry; +import entities.DatasetService; +import entities.Organisation; +import entities.Project; +import entities.Registry; +import entities.Researcher; +import entities.Service; + + +/** + * A DAO factory for non-managed environments + */ +public class JpaDaoFactory implements DaoFactory +{ + private static String persistenceUnit = null; + private static Map daoImpls = null; + + public static void setPersistenceContext(String persistenceUnit) + { + JpaDaoFactory.persistenceUnit = persistenceUnit; + } + + private static void populateMappings() + { + daoImpls = new HashMap(); + daoImpls.put(Organisation.class.getName(), OrganisationDaoImpl.class.getName()); + daoImpls.put(DataRepository.class.getName(), (DataRepositoryDaoImpl.class.getName())); + daoImpls.put(Dataset.class.getName(), (DatasetDaoImpl.class.getName())); + daoImpls.put(DatasetProfile.class.getName(), (DatasetProfileDaoImpl.class.getName())); + daoImpls.put(DatasetProfileRuleset.class.getName(), (DatasetProfileRulesetDaoImpl.class.getName())); + daoImpls.put(DatasetProfileViewstyle.class.getName(), (DatasetProfileViewstyleDaoImpl.class.getName())); + daoImpls.put(DatasetRegistry.class.getName(), (DatasetRegistryDaoImpl.class.getName())); + daoImpls.put(DatasetService.class.getName(), (DatasetServiceDaoImpl.class.getName())); + daoImpls.put(DMP.class.getName(), (DMPDaoImpl.class.getName())); + daoImpls.put(DMPProfile.class.getName(), (DMPProfileDaoImpl.class.getName())); + daoImpls.put(DMPResearcher.class.getName(), (DMPResearcherDaoImpl.class.getName())); + daoImpls.put(Organisation.class.getName(), (OrganisationDaoImpl.class.getName())); + daoImpls.put(Project.class.getName(), (ProjectDaoImpl.class.getName())); + daoImpls.put(Registry.class.getName(), (RegistryDaoImpl.class.getName())); + daoImpls.put(Researcher.class.getName(), (ResearcherDaoImpl.class.getName())); + daoImpls.put(Service.class.getName(), (ServiceDaoImpl.class.getName())); + } + + @SuppressWarnings("rawtypes") + public Dao getDao(Class type) throws Exception + { + if(daoImpls == null) populateMappings(); + return (Dao)Class.forName(daoImpls.get(type.getName())).newInstance(); + } + + public void overrideMappings(Map mappings) + { + populateMappings(); + daoImpls.putAll(mappings); + } +} diff --git a/dmp-backend/src/main/java/dao/SpringJpaDaoFactory.java b/dmp-backend/src/main/java/dao/SpringJpaDaoFactory.java new file mode 100644 index 000000000..52465141e --- /dev/null +++ b/dmp-backend/src/main/java/dao/SpringJpaDaoFactory.java @@ -0,0 +1,120 @@ +package dao; + +import java.util.HashMap; +import java.util.Map; + +import org.springframework.beans.BeansException; +import org.springframework.context.ApplicationContext; +import org.springframework.context.ApplicationContextAware; + +import dao.entities.DMPDaoImpl; +import dao.entities.DMPProfileDaoImpl; +import dao.entities.DMPResearcherDaoImpl; +import dao.entities.DataRepositoryDaoImpl; +import dao.entities.DatasetDaoImpl; +import dao.entities.DatasetProfileDaoImpl; +import dao.entities.DatasetProfileRulesetDaoImpl; +import dao.entities.DatasetProfileViewstyleDaoImpl; +import dao.entities.DatasetRegistryDaoImpl; +import dao.entities.DatasetServiceDaoImpl; +import dao.entities.OrganisationDaoImpl; +import dao.entities.ProjectDaoImpl; +import dao.entities.RegistryDaoImpl; +import dao.entities.ResearcherDaoImpl; +import dao.entities.ServiceDaoImpl; +import entities.DMP; +import entities.DMPProfile; +import entities.DMPResearcher; +import entities.DataRepository; +import entities.Dataset; +import entities.DatasetProfile; +import entities.DatasetProfileRuleset; +import entities.DatasetProfileViewstyle; +import entities.DatasetRegistry; +import entities.DatasetService; +import entities.Organisation; +import entities.Project; +import entities.Registry; +import entities.Researcher; +import entities.Service; + + +/** + * A DAO factory for Spring managed environment + */ +public class SpringJpaDaoFactory implements DaoFactory +{ + public static class SpringApplicationContext implements ApplicationContextAware { + + private static ApplicationContext CONTEXT; + + /** + * This method is called from within the ApplicationContext once it is + * done starting up, it will stick a reference to itself into this bean. + * @param context a reference to the ApplicationContext. + */ + public void setApplicationContext(ApplicationContext context) throws BeansException { + CONTEXT = context; + } + + /** + * This is about the same as context.getBean("beanName"), except it has its + * own static handle to the Spring context, so calling this method statically + * will give access to the beans by name in the Spring application context. + * As in the context.getBean("beanName") call, the caller must cast to the + * appropriate target class. If the bean does not exist, then a Runtime error + * will be thrown. + * @param beanName the name of the bean to get. + * @return an Object reference to the named bean. + */ + public static Object getBean(String beanName) { + return CONTEXT.getBean(beanName); + } + } + + private static String persistenceUnit = null; + private static Map daoImpls = null; + + public static void setPersistenceContext(String persistenceUnit) + { + SpringJpaDaoFactory.persistenceUnit = persistenceUnit; + } + + private static String getBeanName(String className) + { + return Character.toLowerCase(className.charAt(0)) + + (className.length() > 1 ? className.substring(1) : ""); + } + private static void populateMappings() + { + daoImpls = new HashMap(); + daoImpls.put(DataRepository.class.getName(), getBeanName(DataRepositoryDaoImpl.class.getSimpleName())); + daoImpls.put(Dataset.class.getName(), getBeanName(DatasetDaoImpl.class.getSimpleName())); + daoImpls.put(DatasetProfile.class.getName(), getBeanName(DatasetProfileDaoImpl.class.getSimpleName())); + daoImpls.put(DatasetProfileRuleset.class.getName(), getBeanName(DatasetProfileRulesetDaoImpl.class.getSimpleName())); + daoImpls.put(DatasetProfileViewstyle.class.getName(), getBeanName(DatasetProfileViewstyleDaoImpl.class.getSimpleName())); + daoImpls.put(DatasetRegistry.class.getName(), getBeanName(DatasetRegistryDaoImpl.class.getSimpleName())); + daoImpls.put(DatasetService.class.getName(), getBeanName(DatasetServiceDaoImpl.class.getSimpleName())); + daoImpls.put(DMP.class.getName(), getBeanName(DMPDaoImpl.class.getSimpleName())); + daoImpls.put(DMPProfile.class.getName(), getBeanName(DMPProfileDaoImpl.class.getSimpleName())); + daoImpls.put(DMPResearcher.class.getName(), getBeanName(DMPResearcherDaoImpl.class.getSimpleName())); + daoImpls.put(Organisation.class.getName(), getBeanName(OrganisationDaoImpl.class.getSimpleName())); + daoImpls.put(Project.class.getName(), getBeanName(ProjectDaoImpl.class.getSimpleName())); + daoImpls.put(Registry.class.getName(), getBeanName(RegistryDaoImpl.class.getSimpleName())); + daoImpls.put(Researcher.class.getName(), getBeanName(ResearcherDaoImpl.class.getSimpleName())); + daoImpls.put(Service.class.getName(), getBeanName(ServiceDaoImpl.class.getSimpleName())); + } + + @SuppressWarnings("rawtypes") + public Dao getDao(Class type) throws Exception + { + if(daoImpls == null) populateMappings(); + return (Dao)SpringApplicationContext.getBean(daoImpls.get(type.getName())); + } + + public void overrideMappings(Map mappings) + { + populateMappings(); + daoImpls.putAll(mappings); + } +} diff --git a/dmp-backend/src/main/java/dao/entities/DMPDao.java b/dmp-backend/src/main/java/dao/entities/DMPDao.java new file mode 100644 index 000000000..c7f49858a --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DMPDao.java @@ -0,0 +1,16 @@ +package dao.entities; + +import java.util.List; +import java.util.UUID; + +import dao.Dao; +import entities.DMP; +import entities.Organisation; + +public interface DMPDao extends Dao { + + public List listAllIDs(); + + + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DMPDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DMPDaoImpl.java new file mode 100644 index 000000000..556f1a48d --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DMPDaoImpl.java @@ -0,0 +1,26 @@ +package dao.entities; + +import java.util.List; +import java.util.UUID; + +import javax.persistence.TypedQuery; + +import dao.JpaDao; +import entities.DMP; + +public class DMPDaoImpl extends JpaDao implements DMPDao { + + public DMP loadDetails(DMP t) { + // TODO Auto-generated method stub + return null; + } + + @Override + public List listAllIDs() { + String queryString = "SELECT dmp.id FROM DMP dmp"; + TypedQuery typedQuery = entityManager.createQuery(queryString, UUID.class); + return typedQuery.getResultList(); + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DMPProfileDao.java b/dmp-backend/src/main/java/dao/entities/DMPProfileDao.java new file mode 100644 index 000000000..c48a9fdea --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DMPProfileDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DMPProfile; + +public interface DMPProfileDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DMPProfileDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DMPProfileDaoImpl.java new file mode 100644 index 000000000..9a431955a --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DMPProfileDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DMPProfile; + +public class DMPProfileDaoImpl extends JpaDao implements DMPProfileDao { + + public DMPProfile loadDetails(DMPProfile t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DMPResearcherDao.java b/dmp-backend/src/main/java/dao/entities/DMPResearcherDao.java new file mode 100644 index 000000000..db9537448 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DMPResearcherDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DMPResearcher; + +public interface DMPResearcherDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DMPResearcherDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DMPResearcherDaoImpl.java new file mode 100644 index 000000000..e7f469c46 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DMPResearcherDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DMPResearcher; + +public class DMPResearcherDaoImpl extends JpaDao implements DMPResearcherDao { + + public DMPResearcher loadDetails(DMPResearcher t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DataRepositoryDao.java b/dmp-backend/src/main/java/dao/entities/DataRepositoryDao.java new file mode 100644 index 000000000..58b54cf9f --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DataRepositoryDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DataRepository; + +public interface DataRepositoryDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DataRepositoryDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DataRepositoryDaoImpl.java new file mode 100644 index 000000000..1b9449010 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DataRepositoryDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DataRepository; + +public class DataRepositoryDaoImpl extends JpaDao implements DataRepositoryDao { + + public DataRepository loadDetails(DataRepository t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DatasetDao.java b/dmp-backend/src/main/java/dao/entities/DatasetDao.java new file mode 100644 index 000000000..eeffa638b --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetDao.java @@ -0,0 +1,14 @@ +package dao.entities; + +import java.util.List; +import java.util.UUID; + +import dao.Dao; +import entities.Dataset; + +public interface DatasetDao extends Dao { + + + public List listAllIDs(); + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DatasetDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DatasetDaoImpl.java new file mode 100644 index 000000000..3b774ec1b --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetDaoImpl.java @@ -0,0 +1,26 @@ +package dao.entities; + +import java.util.List; +import java.util.UUID; + +import javax.persistence.TypedQuery; +import javax.transaction.Transactional; + +import dao.JpaDao; +import entities.Dataset; + +public class DatasetDaoImpl extends JpaDao implements DatasetDao { + + public Dataset loadDetails(Dataset t) { + // TODO Auto-generated method stub + return null; + } + + @Override + public List listAllIDs() { + String queryString = "SELECT dataset.id FROM Dataset dataset"; + TypedQuery typedQuery = entityManager.createQuery(queryString, UUID.class); + return typedQuery.getResultList(); + } + +} diff --git a/dmp-backend/src/main/java/dao/entities/DatasetProfileDao.java b/dmp-backend/src/main/java/dao/entities/DatasetProfileDao.java new file mode 100644 index 000000000..1baae3fe7 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetProfileDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DatasetProfile; + +public interface DatasetProfileDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DatasetProfileDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DatasetProfileDaoImpl.java new file mode 100644 index 000000000..469ec8f48 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetProfileDaoImpl.java @@ -0,0 +1,18 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DatasetProfile; + +public class DatasetProfileDaoImpl extends JpaDao implements DatasetProfileDao { + + + public DatasetProfile loadDetails(DatasetProfile t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DatasetProfileRulesetDao.java b/dmp-backend/src/main/java/dao/entities/DatasetProfileRulesetDao.java new file mode 100644 index 000000000..478579922 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetProfileRulesetDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DatasetProfileRuleset; + +public interface DatasetProfileRulesetDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DatasetProfileRulesetDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DatasetProfileRulesetDaoImpl.java new file mode 100644 index 000000000..59c4ebeb0 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetProfileRulesetDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DatasetProfileRuleset; + +public class DatasetProfileRulesetDaoImpl extends JpaDao implements DatasetProfileRulesetDao { + + public DatasetProfileRuleset loadDetails(DatasetProfileRuleset t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DatasetProfileViewstyleDao.java b/dmp-backend/src/main/java/dao/entities/DatasetProfileViewstyleDao.java new file mode 100644 index 000000000..6fee75767 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetProfileViewstyleDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DatasetProfileViewstyle; + +public interface DatasetProfileViewstyleDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DatasetProfileViewstyleDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DatasetProfileViewstyleDaoImpl.java new file mode 100644 index 000000000..3467ae403 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetProfileViewstyleDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DatasetProfileViewstyle; + +public class DatasetProfileViewstyleDaoImpl extends JpaDao implements DatasetProfileViewstyleDao { + + public DatasetProfileViewstyle loadDetails(DatasetProfileViewstyle t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DatasetRegistryDao.java b/dmp-backend/src/main/java/dao/entities/DatasetRegistryDao.java new file mode 100644 index 000000000..715048c7e --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetRegistryDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DatasetRegistry; + +public interface DatasetRegistryDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DatasetRegistryDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DatasetRegistryDaoImpl.java new file mode 100644 index 000000000..b35e02eb7 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetRegistryDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DatasetRegistry; + +public class DatasetRegistryDaoImpl extends JpaDao implements DatasetRegistryDao { + + public DatasetRegistry loadDetails(DatasetRegistry t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/DatasetServiceDao.java b/dmp-backend/src/main/java/dao/entities/DatasetServiceDao.java new file mode 100644 index 000000000..fe1e7c5be --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetServiceDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.DatasetService; + +public interface DatasetServiceDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/DatasetServiceDaoImpl.java b/dmp-backend/src/main/java/dao/entities/DatasetServiceDaoImpl.java new file mode 100644 index 000000000..9c70a737c --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/DatasetServiceDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.DatasetService; + +public class DatasetServiceDaoImpl extends JpaDao implements DatasetServiceDao { + + public DatasetService loadDetails(DatasetService t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/OrganisationDao.java b/dmp-backend/src/main/java/dao/entities/OrganisationDao.java new file mode 100644 index 000000000..0e0634364 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/OrganisationDao.java @@ -0,0 +1,11 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.Organisation; + +public interface OrganisationDao extends Dao { + + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/OrganisationDaoImpl.java b/dmp-backend/src/main/java/dao/entities/OrganisationDaoImpl.java new file mode 100644 index 000000000..ffa5ef0a4 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/OrganisationDaoImpl.java @@ -0,0 +1,20 @@ +package dao.entities; + +import java.util.UUID; + +import javax.persistence.Query; +import javax.transaction.Transactional; + + +import dao.JpaDao; +import entities.Organisation; + +public class OrganisationDaoImpl extends JpaDao implements OrganisationDao { + + public Organisation loadDetails(Organisation t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/ProjectDao.java b/dmp-backend/src/main/java/dao/entities/ProjectDao.java new file mode 100644 index 000000000..f0a922c6f --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/ProjectDao.java @@ -0,0 +1,13 @@ +package dao.entities; + +import java.util.List; +import java.util.UUID; + +import dao.Dao; +import entities.Project; + +public interface ProjectDao extends Dao { + + public List listAllIDs(); + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/ProjectDaoImpl.java b/dmp-backend/src/main/java/dao/entities/ProjectDaoImpl.java new file mode 100644 index 000000000..decc9a762 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/ProjectDaoImpl.java @@ -0,0 +1,26 @@ +package dao.entities; + +import java.util.List; +import java.util.UUID; + +import javax.persistence.TypedQuery; + +import dao.JpaDao; +import entities.Project; + +public class ProjectDaoImpl extends JpaDao implements ProjectDao { + + public Project loadDetails(Project t) { + // TODO Auto-generated method stub + return null; + } + + @Override + public List listAllIDs() { + String queryString = "SELECT project.id FROM Project project"; + TypedQuery typedQuery = entityManager.createQuery(queryString, UUID.class); + return typedQuery.getResultList(); + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/RegistryDao.java b/dmp-backend/src/main/java/dao/entities/RegistryDao.java new file mode 100644 index 000000000..da4c8ad07 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/RegistryDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.Registry; + +public interface RegistryDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/RegistryDaoImpl.java b/dmp-backend/src/main/java/dao/entities/RegistryDaoImpl.java new file mode 100644 index 000000000..c1bf9e83b --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/RegistryDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.Registry; + +public class RegistryDaoImpl extends JpaDao implements RegistryDao { + + public Registry loadDetails(Registry t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/ResearcherDao.java b/dmp-backend/src/main/java/dao/entities/ResearcherDao.java new file mode 100644 index 000000000..1a285bf7e --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/ResearcherDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.Researcher; + +public interface ResearcherDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/ResearcherDaoImpl.java b/dmp-backend/src/main/java/dao/entities/ResearcherDaoImpl.java new file mode 100644 index 000000000..b5b9537c5 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/ResearcherDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.Researcher; + +public class ResearcherDaoImpl extends JpaDao implements ResearcherDao { + + public Researcher loadDetails(Researcher t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/dao/entities/ServiceDao.java b/dmp-backend/src/main/java/dao/entities/ServiceDao.java new file mode 100644 index 000000000..381d038e5 --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/ServiceDao.java @@ -0,0 +1,10 @@ +package dao.entities; + +import java.util.UUID; + +import dao.Dao; +import entities.Service; + +public interface ServiceDao extends Dao { + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/dao/entities/ServiceDaoImpl.java b/dmp-backend/src/main/java/dao/entities/ServiceDaoImpl.java new file mode 100644 index 000000000..61ef9e28f --- /dev/null +++ b/dmp-backend/src/main/java/dao/entities/ServiceDaoImpl.java @@ -0,0 +1,17 @@ +package dao.entities; + +import java.util.UUID; + + +import dao.JpaDao; +import entities.Service; + +public class ServiceDaoImpl extends JpaDao implements ServiceDao { + + public Service loadDetails(Service t) { + // TODO Auto-generated method stub + return null; + } + + +} diff --git a/dmp-backend/src/main/java/entities/DMP.java b/dmp-backend/src/main/java/entities/DMP.java new file mode 100644 index 000000000..baf021587 --- /dev/null +++ b/dmp-backend/src/main/java/entities/DMP.java @@ -0,0 +1,182 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.ManyToOne; +import javax.persistence.OneToMany; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.Cascade; +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; +import com.fasterxml.jackson.core.JsonProcessingException; +import com.fasterxml.jackson.databind.ObjectMapper; +import com.fasterxml.jackson.databind.SerializationFeature; + + +@Entity +@Table(name="\"DMP\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DMP implements Serializable { + + + private static final long serialVersionUID = -8263056535208547615L; + + public DMP () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Type(type="org.hibernate.type.PostgresUUIDType") + @Column(name = "\"Previous\"") + private UUID previous; + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Version\"") + private Integer version; + + @OneToOne(mappedBy = "dmp", cascade = CascadeType.ALL, fetch = FetchType.EAGER) + private Dataset dataset; + + @OneToOne(fetch = FetchType.EAGER, cascade=CascadeType.ALL) +// @Cascade(value=org.hibernate.annotations.CascadeType.ALL) + @JoinColumn(name = "\"Project\"") + private Project project; + + + @Type(type="typedefinition.XMLType") + @Column(name = "\"ProfileData\"", columnDefinition = "xml", nullable = true) + private String profileData; + + @OneToOne(fetch = FetchType.EAGER, cascade=CascadeType.ALL) +// @Cascade(value=org.hibernate.annotations.CascadeType.ALL) + @JoinColumn(name = "\"Profile\"") + private DMPProfile profile; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DMPOrganisation\"", + joinColumns={@JoinColumn(name="\"DMP\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Organisation\"", referencedColumnName="\"ID\"")} + ) + private Set organisations; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DMPResearcher\"", + joinColumns={@JoinColumn(name="\"DMP\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Researcher\"", referencedColumnName="\"ID\"")} + ) + private Set researchers; + + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public UUID getPrevious() { + return previous; + } + + public void setPrevious(UUID previous) { + this.previous = previous; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public Integer getVersion() { + return version; + } + + public void setVersion(Integer version) { + this.version = version; + } + + public Project getProject() { + return project; + } + + public void setProject(Project project) { + this.project = project; + } + + public String getProfileData() { + return profileData; + } + + public void setProfileData(String profileData) { + this.profileData = profileData; + } + + public DMPProfile getProfile() { + return profile; + } + + public void setProfile(DMPProfile profile) { + this.profile = profile; + } + + public Dataset getDataset() { + return dataset; + } + + public void setDataset(Dataset dataset) { + this.dataset = dataset; + } + + public Set getOrganisations() { + return organisations; + } + + public void setOrganisations(Set organisations) { + this.organisations = organisations; + } + + public Set getResearchers() { + return researchers; + } + + public void setResearchers(Set researchers) { + this.researchers = researchers; + } + + public String toString() { + try { + return new ObjectMapper().enable(SerializationFeature.INDENT_OUTPUT).writeValueAsString(this); + } catch (JsonProcessingException e) { + return ""; + } + } + +} diff --git a/dmp-backend/src/main/java/entities/DMPOrganisation.java b/dmp-backend/src/main/java/entities/DMPOrganisation.java new file mode 100644 index 000000000..24c57c880 --- /dev/null +++ b/dmp-backend/src/main/java/entities/DMPOrganisation.java @@ -0,0 +1,79 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DMPOrganisation\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DMPOrganisation implements Serializable { + + + private static final long serialVersionUID = -222030426979174777L; + + public DMPOrganisation () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"DMP\"") + private UUID dmp; + + @Column(name = "\"Organisation\"") + private UUID organisation; + + @Column(name = "\"Role\"") + private Integer role; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public UUID getDmp() { + return dmp; + } + + public void setDmp(UUID dmp) { + this.dmp = dmp; + } + + public UUID getOrganisation() { + return organisation; + } + + public void setOrganisation(UUID organisation) { + this.organisation = organisation; + } + + public Integer getRole() { + return role; + } + + public void setRole(Integer role) { + this.role = role; + } + + +} diff --git a/dmp-backend/src/main/java/entities/DMPProfile.java b/dmp-backend/src/main/java/entities/DMPProfile.java new file mode 100644 index 000000000..6c4f95e81 --- /dev/null +++ b/dmp-backend/src/main/java/entities/DMPProfile.java @@ -0,0 +1,86 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DMPProfile\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DMPProfile implements Serializable { + + private static final long serialVersionUID = 3213099144442689808L; + + public DMPProfile () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @OneToOne(fetch = FetchType.EAGER, mappedBy = "profile", cascade = CascadeType.ALL) + private DMP dmp; + + + @Column(name = "\"Label\"") + private String label; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public DMP getDmp() { + return dmp; + } + + public void setDmp(DMP dmp) { + this.dmp = dmp; + } + + + + +} diff --git a/dmp-backend/src/main/java/entities/DMPResearcher.java b/dmp-backend/src/main/java/entities/DMPResearcher.java new file mode 100644 index 000000000..0973b9ba2 --- /dev/null +++ b/dmp-backend/src/main/java/entities/DMPResearcher.java @@ -0,0 +1,80 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DMPResearcher\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DMPResearcher implements Serializable { + + private static final long serialVersionUID = 135449857355252959L; + + public DMPResearcher () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Type(type="org.hibernate.type.PostgresUUIDType") + @Column(name = "\"DMP\"") + private UUID dmp; + + @Type(type="org.hibernate.type.PostgresUUIDType") + @Column(name = "\"Researcher\"") + private UUID researcher; + + @Column(name = "\"Role\"") + private Integer role; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public UUID getDmp() { + return dmp; + } + + public void setDmp(UUID dmp) { + this.dmp = dmp; + } + + public UUID getResearcher() { + return researcher; + } + + public void setResearcher(UUID researcher) { + this.researcher = researcher; + } + + public Integer getRole() { + return role; + } + + public void setRole(Integer role) { + this.role = role; + } + + +} diff --git a/dmp-backend/src/main/java/entities/DataRepository.java b/dmp-backend/src/main/java/entities/DataRepository.java new file mode 100644 index 000000000..70c58534e --- /dev/null +++ b/dmp-backend/src/main/java/entities/DataRepository.java @@ -0,0 +1,130 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.ManyToMany; +import javax.persistence.OneToMany; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity(name="\"DataRepository\"") +@Table(name="\"DataRepository\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DataRepository implements Serializable { + + + private static final long serialVersionUID = 4162323701450468639L; + + public DataRepository () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Abbreviation\"") + private String abbreviation; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true) + private String reference; + + @Column(name = "\"Uri\"") + private String uri; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DatasetDataRepository\"", + joinColumns={@JoinColumn(name="\"DataRepository\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")} + ) + private Set datasets; + + + + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getAbbreviation() { + return abbreviation; + } + + public void setAbbreviation(String abbreviation) { + this.abbreviation = abbreviation; + } + + public String getReference() { + return reference; + } + + public void setReference(String reference) { + this.reference = reference; + } + + public String getUri() { + return uri; + } + + public void setUri(String uri) { + this.uri = uri; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public Set getDatasets() { + return datasets; + } + + public void setDatasets(Set datasets) { + this.datasets = datasets; + } + + +} diff --git a/dmp-backend/src/main/java/entities/Dataset.java b/dmp-backend/src/main/java/entities/Dataset.java new file mode 100644 index 000000000..2628b3ec7 --- /dev/null +++ b/dmp-backend/src/main/java/entities/Dataset.java @@ -0,0 +1,181 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.OneToMany; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.Cascade; +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + +@Entity(name = "Dataset") +@Table(name="\"Dataset\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class Dataset implements Serializable { + + private static final long serialVersionUID = 3575723814399553259L; + + public Dataset () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"Label\"") + private String label; + + + @OneToOne(fetch = FetchType.EAGER, cascade=CascadeType.ALL) +// @Cascade(value=org.hibernate.annotations.CascadeType.ALL) + @JoinColumn(name = "\"DMP\"", nullable = false) + private DMP dmp; + + + @Column(name = "\"Uri\"") + private String uri; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Properties\"", columnDefinition = "xml", nullable = true) + private String properties; + + + @OneToOne(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @Cascade(value=org.hibernate.annotations.CascadeType.ALL) + @JoinColumn(name = "\"Profile\"", nullable = false) + private DatasetProfile profile; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DatasetDataRepository\"", + joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"DataRepository\"", referencedColumnName="\"ID\"")} + ) + private Set dataRepositories; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DatasetRegistry\"", + joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Registry\"", referencedColumnName="\"ID\"")} + ) + private Set registries; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DatasetService\"", + joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Service\"", referencedColumnName="\"ID\"")} + ) + private Set services; + + + + public Set getRegistries() { + return registries; + } + + + public void setRegistries(Set registries) { + this.registries = registries; + } + + + public Set getServices() { + return services; + } + + + public void setServices(Set services) { + this.services = services; + } + + + public UUID getId() { + return id; + } + + + public void setId(UUID id) { + this.id = id; + } + + + public String getLabel() { + return label; + } + + + public void setLabel(String label) { + this.label = label; + } + + + public DMP getDmp() { + return dmp; + } + + + public void setDmp(DMP dmp) { + this.dmp = dmp; + } + + + public String getUri() { + return uri; + } + + + public void setUri(String uri) { + this.uri = uri; + } + + + public String getProperties() { + return properties; + } + + + public void setProperties(String properties) { + this.properties = properties; + } + + + public DatasetProfile getProfile() { + return profile; + } + + + public void setProfile(DatasetProfile profile) { + this.profile = profile; + } + + + public Set getDataRepositories() { + return dataRepositories; + } + + + public void setDataRepositories(Set dataRepositories) { + this.dataRepositories = dataRepositories; + } + +} diff --git a/dmp-backend/src/main/java/entities/DatasetDataRepository.java b/dmp-backend/src/main/java/entities/DatasetDataRepository.java new file mode 100644 index 000000000..a72b2864b --- /dev/null +++ b/dmp-backend/src/main/java/entities/DatasetDataRepository.java @@ -0,0 +1,83 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DatasetDataRepository\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DatasetDataRepository implements Serializable { + + + private static final long serialVersionUID = 576327201656132811L; + + public DatasetDataRepository () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Type(type="org.hibernate.type.PostgresUUIDType") //DEPWARN dependency to Hibernate and PostgreSQL + @Column(name = "\"Dataset\"", nullable = false) + private UUID dataset; + + @Type(type="org.hibernate.type.PostgresUUIDType") //DEPWARN dependency to Hibernate and PostgreSQL + @Column(name = "\"DataRepository\"", nullable = false) + private UUID dataRepository; + + @Column(name = "\"Role\"") + private Integer role; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public UUID getDataset() { + return dataset; + } + + public void setDataset(UUID dataset) { + this.dataset = dataset; + } + + public UUID getDataRepository() { + return dataRepository; + } + + public void setDataRepository(UUID dataRepository) { + this.dataRepository = dataRepository; + } + + public Integer getRole() { + return role; + } + + public void setRole(Integer role) { + this.role = role; + } + + + + +} diff --git a/dmp-backend/src/main/java/entities/DatasetProfile.java b/dmp-backend/src/main/java/entities/DatasetProfile.java new file mode 100644 index 000000000..53919eadc --- /dev/null +++ b/dmp-backend/src/main/java/entities/DatasetProfile.java @@ -0,0 +1,118 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.Cascade; +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Proxy; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DatasetProfile\"") +//@Proxy(lazy = false) +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DatasetProfile implements Serializable { + + + private static final long serialVersionUID = 8203086344232867334L; + + public DatasetProfile () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"Label\"") + private String label; + + @OneToOne(fetch = FetchType.EAGER, mappedBy = "profile", cascade = CascadeType.ALL) + private Dataset dataset; + + @OneToOne(fetch = FetchType.EAGER, cascade=CascadeType.ALL) +// @Cascade(value=org.hibernate.annotations.CascadeType.ALL) + @JoinColumn(name = "\"Ruleset\"", nullable = false) + private DatasetProfileRuleset ruleset; + + + @OneToOne(fetch = FetchType.EAGER, cascade=CascadeType.ALL) +// @Cascade(value=org.hibernate.annotations.CascadeType.ALL) + @JoinColumn(name = "\"Viewstyle\"", nullable = false) + private DatasetProfileViewstyle viewstyle; + + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = false) + private String definition; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + + public DatasetProfileRuleset getRuleset() { + return ruleset; + } + + public void setRuleset(DatasetProfileRuleset ruleset) { + this.ruleset = ruleset; + } + + + public DatasetProfileViewstyle getViewstyle() { + return viewstyle; + } + + public void setViewstyle(DatasetProfileViewstyle viewstyle) { + this.viewstyle = viewstyle; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public Dataset getDataset() { + return dataset; + } + + public void setDataset(Dataset dataset) { + this.dataset = dataset; + } + + + +} diff --git a/dmp-backend/src/main/java/entities/DatasetProfileRuleset.java b/dmp-backend/src/main/java/entities/DatasetProfileRuleset.java new file mode 100644 index 000000000..fe8b02d22 --- /dev/null +++ b/dmp-backend/src/main/java/entities/DatasetProfileRuleset.java @@ -0,0 +1,89 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; +import org.json.JSONObject; +import org.json.XML; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DatasetProfileRuleset\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DatasetProfileRuleset implements Serializable { + + private static final long serialVersionUID = 4249565129050898613L; + + public DatasetProfileRuleset () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @OneToOne(fetch = FetchType.EAGER, mappedBy = "ruleset", cascade = CascadeType.ALL) + private DatasetProfile datasetProfile; + + + @Column(name = "\"Label\"") + private String label; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = false) + private String definition; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getDefinition() { +// return XML.toJSONObject(definition).toString(); //return definition as json + return definition; + } + + public void setDefinition(String definition) { +// this.definition = XML.toString(definition); //if definition is in json + this.definition = definition; + } + + public DatasetProfile getDatasetProfile() { + return datasetProfile; + } + + public void setDatasetProfile(DatasetProfile datasetProfile) { + this.datasetProfile = datasetProfile; + } + + + +} diff --git a/dmp-backend/src/main/java/entities/DatasetProfileViewstyle.java b/dmp-backend/src/main/java/entities/DatasetProfileViewstyle.java new file mode 100644 index 000000000..84a548ede --- /dev/null +++ b/dmp-backend/src/main/java/entities/DatasetProfileViewstyle.java @@ -0,0 +1,87 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; +import org.json.XML; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DatasetProfileViewstyle\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DatasetProfileViewstyle implements Serializable { + + private static final long serialVersionUID = -3251295258160291468L; + + public DatasetProfileViewstyle () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @OneToOne(fetch = FetchType.EAGER, mappedBy = "viewstyle", cascade = CascadeType.ALL) + private DatasetProfile datasetProfile; + + @Column(name = "\"Label\"") + private String label; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = false) + private String definition; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getDefinition() { +// return XML.toJSONObject(definition).toString(); //return definition as json + return definition; + } + + public void setDefinition(String definition) { +// this.definition = XML.toString(definition); //if definition is in json + this.definition = definition; + } + + public DatasetProfile getDatasetProfile() { + return datasetProfile; + } + + public void setDatasetProfile(DatasetProfile datasetProfile) { + this.datasetProfile = datasetProfile; + } + + + +} diff --git a/dmp-backend/src/main/java/entities/DatasetRegistry.java b/dmp-backend/src/main/java/entities/DatasetRegistry.java new file mode 100644 index 000000000..58209c03e --- /dev/null +++ b/dmp-backend/src/main/java/entities/DatasetRegistry.java @@ -0,0 +1,81 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DatasetRegistry\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DatasetRegistry implements Serializable { + + private static final long serialVersionUID = -5594183793725819187L; + + public DatasetRegistry () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @Type(type="org.hibernate.type.PostgresUUIDType") //DEPWARN dependency to Hibernate and PostgreSQL + @Column(name = "\"Dataset\"", nullable = false) + private UUID dataset; + + @Type(type="org.hibernate.type.PostgresUUIDType") //DEPWARN dependency to Hibernate and PostgreSQL + @Column(name = "\"Registry\"", nullable = false) + private UUID registry; + + @Column(name = "\"Role\"") + private Integer role; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public UUID getDataset() { + return dataset; + } + + public void setDataset(UUID dataset) { + this.dataset = dataset; + } + + public UUID getRegistry() { + return registry; + } + + public void setRegistry(UUID registry) { + this.registry = registry; + } + + public Integer getRole() { + return role; + } + + public void setRole(Integer role) { + this.role = role; + } + + +} diff --git a/dmp-backend/src/main/java/entities/DatasetService.java b/dmp-backend/src/main/java/entities/DatasetService.java new file mode 100644 index 000000000..c6c133500 --- /dev/null +++ b/dmp-backend/src/main/java/entities/DatasetService.java @@ -0,0 +1,81 @@ +package entities; + + +import java.io.Serializable; +import java.util.UUID; + +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"DatasetService\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class DatasetService implements Serializable { + + private static final long serialVersionUID = 1469161193939096037L; + + public DatasetService () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @Type(type="org.hibernate.type.PostgresUUIDType") //DEPWARN dependency to Hibernate and PostgreSQL + @Column(name = "\"Dataset\"", nullable = false) + private UUID dataset; + + @Type(type="org.hibernate.type.PostgresUUIDType") //DEPWARN dependency to Hibernate and PostgreSQL + @Column(name = "\"Service\"", nullable = false) + private UUID service; + + @Column(name = "\"Role\"") + private Integer role; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public UUID getDataset() { + return dataset; + } + + public void setDataset(UUID dataset) { + this.dataset = dataset; + } + + public UUID getService() { + return service; + } + + public void setService(UUID service) { + this.service = service; + } + + public Integer getRole() { + return role; + } + + public void setRole(Integer role) { + this.role = role; + } + + +} diff --git a/dmp-backend/src/main/java/entities/Organisation.java b/dmp-backend/src/main/java/entities/Organisation.java new file mode 100644 index 000000000..f046046e1 --- /dev/null +++ b/dmp-backend/src/main/java/entities/Organisation.java @@ -0,0 +1,127 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.OneToMany; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"Organisation\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class Organisation implements Serializable { + + + private static final long serialVersionUID = 3614146195740867782L; + + public Organisation () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Abbreviation\"") + private String abbreviation; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true) + private String reference; + + @Column(name = "\"Uri\"") + private String uri; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DMPOrganisation\"", + joinColumns={@JoinColumn(name="\"Organisation\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"DMP\"", referencedColumnName="\"ID\"")} + ) + private Set dMPs; + + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getAbbreviation() { + return abbreviation; + } + + public void setAbbreviation(String abbreviation) { + this.abbreviation = abbreviation; + } + + public String getReference() { + return reference; + } + + public void setReference(String reference) { + this.reference = reference; + } + + public String getUri() { + return uri; + } + + public void setUri(String uri) { + this.uri = uri; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public Set getdMPs() { + return dMPs; + } + + public void setdMPs(Set dMPs) { + this.dMPs = dMPs; + } + + + +} diff --git a/dmp-backend/src/main/java/entities/Project.java b/dmp-backend/src/main/java/entities/Project.java new file mode 100644 index 000000000..39b47425b --- /dev/null +++ b/dmp-backend/src/main/java/entities/Project.java @@ -0,0 +1,132 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.OneToMany; +import javax.persistence.OneToOne; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; +import com.fasterxml.jackson.core.JsonProcessingException; +import com.fasterxml.jackson.databind.ObjectMapper; +import com.fasterxml.jackson.databind.SerializationFeature; + + +@Entity +@Table(name="\"Project\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class Project implements Serializable { + + private static final long serialVersionUID = -767048645098311154L; + + public Project () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @OneToOne(fetch = FetchType.EAGER, mappedBy = "project", cascade = CascadeType.ALL) + private DMP dmp; + + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Abbreviation\"") + private String abbreviation; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true) + private String reference; + + @Column(name = "\"Uri\"") + private String uri; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getAbbreviation() { + return abbreviation; + } + + public void setAbbreviation(String abbreviation) { + this.abbreviation = abbreviation; + } + + public String getReference() { + return reference; + } + + public void setReference(String reference) { + this.reference = reference; + } + + public String getUri() { + return uri; + } + + public void setUri(String uri) { + this.uri = uri; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + + public DMP getDMP() { + return dmp; + } + + public void setDMP(DMP dmp) { + this.dmp = dmp; + } + + public String toString() { + try { + return new ObjectMapper().enable(SerializationFeature.INDENT_OUTPUT).writeValueAsString(this).replace("\"", """); + } catch (JsonProcessingException e) { + return ""; + } + } + + +} diff --git a/dmp-backend/src/main/java/entities/Registry.java b/dmp-backend/src/main/java/entities/Registry.java new file mode 100644 index 000000000..1a24da42e --- /dev/null +++ b/dmp-backend/src/main/java/entities/Registry.java @@ -0,0 +1,127 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.OneToMany; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"Registry\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class Registry implements Serializable { + + private static final long serialVersionUID = -277572262583178090L; + + public Registry () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Abbreviation\"") + private String abbreviation; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true) + private String reference; + + @Column(name = "\"Uri\"") + private String uri; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DatasetRegistry\"", + joinColumns={@JoinColumn(name="\"Registry\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")} + ) + private Set datasets; + + + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getAbbreviation() { + return abbreviation; + } + + public void setAbbreviation(String abbreviation) { + this.abbreviation = abbreviation; + } + + public String getReference() { + return reference; + } + + public void setReference(String reference) { + this.reference = reference; + } + + public String getUri() { + return uri; + } + + public void setUri(String uri) { + this.uri = uri; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public Set getDatasets() { + return datasets; + } + + public void setDatasets(Set datasets) { + this.datasets = datasets; + } + + + +} diff --git a/dmp-backend/src/main/java/entities/Researcher.java b/dmp-backend/src/main/java/entities/Researcher.java new file mode 100644 index 000000000..a8ba70f02 --- /dev/null +++ b/dmp-backend/src/main/java/entities/Researcher.java @@ -0,0 +1,127 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.OneToMany; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"Researcher\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class Researcher implements Serializable { + + + private static final long serialVersionUID = -2513186824704729896L; + + public Researcher () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Uri\"") + private String uri; + + @Column(name = "\"PrimaryEmail\"") + private String primaryEmail; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true) + private String reference; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DMPResearcher\"", + joinColumns={@JoinColumn(name="\"Researcher\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"DMP\"", referencedColumnName="\"ID\"")} + ) + private Set dMPs; + + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getPrimaryEmail() { + return primaryEmail; + } + + public void setPrimaryEmail(String primaryEmail) { + this.primaryEmail = primaryEmail; + } + + public String getReference() { + return reference; + } + + public void setReference(String reference) { + this.reference = reference; + } + + public String getUri() { + return uri; + } + + public void setUri(String uri) { + this.uri = uri; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public Set getdMPs() { + return dMPs; + } + + public void setdMPs(Set dMPs) { + this.dMPs = dMPs; + } + + + +} diff --git a/dmp-backend/src/main/java/entities/Service.java b/dmp-backend/src/main/java/entities/Service.java new file mode 100644 index 000000000..dc1a2a406 --- /dev/null +++ b/dmp-backend/src/main/java/entities/Service.java @@ -0,0 +1,130 @@ +package entities; + + +import java.io.Serializable; +import java.util.Set; +import java.util.UUID; + +import javax.persistence.Basic; +import javax.persistence.CascadeType; +import javax.persistence.Column; +import javax.persistence.Entity; +import javax.persistence.FetchType; +import javax.persistence.GeneratedValue; +import javax.persistence.GenerationType; +import javax.persistence.Id; +import javax.persistence.JoinColumn; +import javax.persistence.JoinTable; +import javax.persistence.OneToMany; +import javax.persistence.Table; + +import org.hibernate.annotations.GenericGenerator; +import org.hibernate.annotations.Type; + +import com.fasterxml.jackson.annotation.JsonIdentityInfo; +import com.fasterxml.jackson.annotation.ObjectIdGenerators; + + +@Entity +@Table(name="\"Service\"") +@JsonIdentityInfo(generator=ObjectIdGenerators.PropertyGenerator.class, property="id") +public class Service implements Serializable { + + private static final long serialVersionUID = 7243446610500174060L; + + public Service () {} + + + @Id + @GeneratedValue + @GenericGenerator(name = "uuid2", strategy = "uuid2") + @Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)") + private UUID id; + + + @Column(name = "\"Label\"") + private String label; + + @Column(name = "\"Abbreviation\"") + private String abbreviation; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true) + private String reference; + + @Column(name = "\"Uri\"") + private String uri; + + @Type(type="typedefinition.XMLType") + @Column(name = "\"Definition\"", columnDefinition = "xml", nullable = true) + private String definition; + + + @OneToMany(fetch = FetchType.EAGER, cascade=CascadeType.ALL) + @JoinTable(name="\"DatasetService\"", + joinColumns={@JoinColumn(name="\"Service\"", referencedColumnName="\"ID\"")}, + inverseJoinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")} + ) + private Set datasets; + + + + public UUID getId() { + return id; + } + + public void setId(UUID id) { + this.id = id; + } + + public String getLabel() { + return label; + } + + public void setLabel(String label) { + this.label = label; + } + + public String getAbbreviation() { + return abbreviation; + } + + public void setAbbreviation(String abbreviation) { + this.abbreviation = abbreviation; + } + + public String getReference() { + return reference; + } + + public void setReference(String reference) { + this.reference = reference; + } + + public String getUri() { + return uri; + } + + public void setUri(String uri) { + this.uri = uri; + } + + public String getDefinition() { + return definition; + } + + public void setDefinition(String definition) { + this.definition = definition; + } + + public Set getDatasets() { + return datasets; + } + + public void setDatasets(Set datasets) { + this.datasets = datasets; + } + + + +} diff --git a/dmp-backend/src/main/java/helpers/Transformers.java b/dmp-backend/src/main/java/helpers/Transformers.java new file mode 100644 index 000000000..a37f198de --- /dev/null +++ b/dmp-backend/src/main/java/helpers/Transformers.java @@ -0,0 +1,106 @@ +package helpers; + +import java.util.Arrays; +import java.util.HashSet; +import java.util.UUID; + +import org.springframework.util.MultiValueMap; + +import com.fasterxml.jackson.core.JsonProcessingException; +import com.fasterxml.jackson.databind.ObjectMapper; + +import entities.DMP; +import entities.DMPProfile; +import entities.DataRepository; +import entities.Dataset; +import entities.DatasetProfile; +import entities.DatasetProfileRuleset; +import entities.DatasetProfileViewstyle; +import entities.Project; +import entities.Registry; +import entities.Service; + +public class Transformers { + + + public static DMP createDMPfromMap(MultiValueMap formData) { + + DatasetProfileRuleset dpr = new DatasetProfileRuleset(); + dpr.setLabel(formData.getFirst("DatasetProfileRuleset.label")); + dpr.setDefinition(formData.getFirst("DatasetProfileRuleset.definition")); + + DatasetProfileViewstyle dpv = new DatasetProfileViewstyle(); + dpv.setLabel(formData.getFirst("DatasetProfileViewStyle.label")); + dpv.setDefinition(formData.getFirst("DatasetProfileViewStyle.definition")); + + DatasetProfile dp = new DatasetProfile(); + dp.setLabel(formData.getFirst("DatasetProfile.label")); + dp.setDefinition(formData.getFirst("DatasetProfile.definition")); + dp.setRuleset(dpr); + dp.setViewstyle(dpv); + + + Project project = new Project(); + project.setDefinition(formData.getFirst("Project.definition")); + project.setLabel(formData.getFirst("Project.label")); + project.setReference(formData.getFirst("Project.reference")); + project.setUri(formData.getFirst("Project.uri")); + + + DMPProfile profile = new DMPProfile(); + profile.setLabel(formData.getFirst("DMPProfile.label")); + profile.setDefinition(formData.getFirst("DMPProfile.definition")); + + + DataRepository dr = new DataRepository(); + dr.setLabel(formData.getFirst("DataRepository.label")); + dr.setDefinition(formData.getFirst("DataRepository.definition")); + dr.setReference(formData.getFirst("DataRepository.reference")); + dr.setAbbreviation(formData.getFirst("DataRepository.abbr")); + dr.setUri(formData.getFirst("DataRepository.uri")); + + Registry reg = new Registry(); + reg.setLabel(formData.getFirst("Registry.label")); + reg.setAbbreviation(formData.getFirst("Registry.abbr")); + reg.setReference(formData.getFirst("Registry.reference")); + reg.setUri(formData.getFirst("Registry.uri")); + reg.setDefinition(formData.getFirst("Registry.definition")); + + Service ser = new Service(); + ser.setLabel(formData.getFirst("Service.label")); + ser.setAbbreviation(formData.getFirst("Service.abbr")); + ser.setReference(formData.getFirst("Service.reference")); + ser.setUri(formData.getFirst("Service.uri")); + ser.setDefinition(formData.getFirst("Service.definition")); + + + Dataset ds = new Dataset(); + ds.setLabel(formData.getFirst("Dataset.label")); + ds.setProperties(formData.getFirst("Dataset.props")); + ds.setUri(formData.getFirst("Dataset.uri")); + ds.setProfile(dp); + ds.setDataRepositories(new HashSet(Arrays.asList(dr))); + ds.setRegistries(new HashSet(Arrays.asList(reg))); + ds.setServices(new HashSet(Arrays.asList(ser))); + + + DMP dmp = new DMP(); + dmp.setLabel(formData.getFirst("DMP.label")); + try { + dmp.setPrevious(UUID.fromString(formData.getFirst("DMP.previous"))); + }catch(Exception ex) {/*do nothing*/} + dmp.setProfile(profile); + dmp.setProfileData(formData.getFirst("DMP.profileData")); + dmp.setProject(project); + dmp.setVersion(Integer.parseInt(formData.getFirst("DMP.version"))); + dmp.setDataset(ds); + + + System.out.println(dmp); + + return dmp; + + } + + +} diff --git a/dmp-backend/src/main/java/rest/BackendInterface.java b/dmp-backend/src/main/java/rest/BackendInterface.java new file mode 100644 index 000000000..2d95ca8e7 --- /dev/null +++ b/dmp-backend/src/main/java/rest/BackendInterface.java @@ -0,0 +1,327 @@ +package rest; + +import java.util.Arrays; +import java.util.HashSet; +import java.util.List; +import java.util.UUID; + +import org.hibernate.Hibernate; +import org.hibernate.Session; +import org.apache.commons.lang3.SerializationUtils; +import org.springframework.beans.factory.annotation.Autowired; +import org.springframework.http.HttpStatus; +import org.springframework.http.MediaType; +import org.springframework.http.ResponseEntity; +import org.springframework.transaction.annotation.Transactional; +import org.springframework.util.MultiValueMap; +import org.springframework.web.bind.annotation.CrossOrigin; +import org.springframework.web.bind.annotation.PathVariable; +import org.springframework.web.bind.annotation.RequestBody; +import org.springframework.web.bind.annotation.RequestMapping; +import org.springframework.web.bind.annotation.RequestMethod; +import org.springframework.web.bind.annotation.RequestParam; +import org.springframework.web.bind.annotation.ResponseBody; +import org.springframework.web.bind.annotation.RestController; + +import com.fasterxml.jackson.core.JsonProcessingException; +import com.fasterxml.jackson.databind.ObjectMapper; + +import dao.entities.DMPDao; +import dao.entities.DMPProfileDao; +import dao.entities.DMPResearcherDao; +import dao.entities.DataRepositoryDao; +import dao.entities.DatasetDao; +import dao.entities.DatasetProfileDao; +import dao.entities.DatasetProfileRulesetDao; +import dao.entities.DatasetProfileViewstyleDao; +import dao.entities.DatasetRegistryDao; +import dao.entities.DatasetServiceDao; +import dao.entities.OrganisationDao; +import dao.entities.ProjectDao; +import dao.entities.RegistryDao; +import dao.entities.ResearcherDao; +import dao.entities.ServiceDao; +import entities.DMP; +import entities.DMPProfile; +import entities.DataRepository; +import entities.Dataset; +import entities.DatasetProfile; +import entities.DatasetProfileRuleset; +import entities.DatasetProfileViewstyle; +import entities.DatasetRegistry; +import entities.DatasetService; +import entities.Organisation; +import entities.Project; +import entities.Registry; +import entities.Service; +import helpers.Transformers; + + +@RestController +@CrossOrigin +public class BackendInterface { + + @Autowired private DataRepositoryDao dataRepositoryDao; + @Autowired private DatasetDao datasetDao; + @Autowired private DatasetProfileDao datasetProfileDao; + @Autowired private DatasetProfileRulesetDao datasetProfileRulesetDao; + @Autowired private DatasetProfileViewstyleDao datasetProfileViewstyleDao; + @Autowired private DMPDao dMPDao; + @Autowired private DMPProfileDao dMPProfileDao; + @Autowired private OrganisationDao organisationDao; + @Autowired private ProjectDao projectDao; + @Autowired private RegistryDao registryDao; + @Autowired private ResearcherDao researcherDao; + @Autowired private ServiceDao serviceDao; + + + + // FETCH BY DMP(S) + + @RequestMapping(method = RequestMethod.GET, value = { "/DMP" }, produces="text/plain") + public @ResponseBody ResponseEntity listDMPs(){ + try { + List allIDs = dMPDao.listAllIDs(); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(allIDs)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Serialization issue: "+ex.getMessage()); + } + } + + + @RequestMapping(method = RequestMethod.GET, value = { "/DMP/{id}" }, produces="application/json") + public @ResponseBody ResponseEntity getDMP(@PathVariable("id") String id){ + try { + DMP dmp = dMPDao.read(UUID.fromString(id)); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(dmp)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("Erroneous input: "+ex.getMessage()); + } + } + + + /** + * This should be called on extreme cases. It's computationally intensive + */ + @RequestMapping(method = RequestMethod.GET, value = { "/getAllDMPs" }, produces="application/json") + public @ResponseBody ResponseEntity getAllDMPs(){ + try { + List allDMPs = dMPDao.getAll(); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(allDMPs)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Serialization issue: "+ex.getMessage()); + } + } + + + + @RequestMapping(method = RequestMethod.POST, value = { "/setDMP" }, consumes = "application/json", produces="text/plain") + public @ResponseBody ResponseEntity setDMP(@RequestBody DMP dmp) { + + //This function is a little bit tricky to implement (due to the irregular ORM mappings of the hibernate). + // Please make changes only if you are sure about what you're altering. + + Dataset dataset = SerializationUtils.clone(dmp.getDataset()); + + dmp.setDataset(null); + + int failsDMP = 0; + String reasonDmp = ""; + DMP storedDMP = null; + //try first to create DMP + try { + storedDMP = dMPDao.create(dmp); + } + catch(Exception e) { + e.printStackTrace(); + failsDMP++; + reasonDmp += e.getMessage(); + //try updating DMP + try { + storedDMP = dMPDao.update(dmp); + } + catch(Exception ex) { + reasonDmp += (System.lineSeparator()+e.getMessage()); + failsDMP++; + ex.printStackTrace(); + } + } + + if(failsDMP==2) + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Could not create or update DMP! Reason: " + reasonDmp); + + dataset.setDmp(storedDMP); //very important! + + int failsDataset = 0; + String reasonDataset = ""; + Dataset storedDataset = null; + if(dataset != null) { + //try first to create DMP + try { + storedDataset = datasetDao.create(dataset); + } + catch(Exception e) { + e.printStackTrace(); + failsDataset++; + reasonDataset += e.getMessage(); + //try updating DMP + try { + storedDataset = datasetDao.update(dataset); + } + catch(Exception ex) { + reasonDataset += (System.lineSeparator()+e.getMessage()); + failsDataset++; + ex.printStackTrace(); + } + } + } + + if(failsDataset != 2) { + if(failsDMP==0) + return ResponseEntity.status(HttpStatus.CREATED).body("Created DMP with id: " + storedDMP.getId()); + else if(failsDMP==1) + return ResponseEntity.status(HttpStatus.CREATED).body("Updated DMP with id: " + storedDMP.getId()); + else + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Could not create DMP! Reason:"+ reasonDmp); + } + else { + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Could not create DMP! Failed to create or update its Dataset. Reason: "+reasonDataset); + } + + + } + + + + @RequestMapping(method = RequestMethod.POST, value = { "/setDMPByForm" }, consumes = MediaType.APPLICATION_FORM_URLENCODED_VALUE, produces="text/plain") + public @ResponseBody ResponseEntity setDMPByForm(@RequestBody MultiValueMap formData) { + DMP dmp = Transformers.createDMPfromMap(formData); + return setDMP(dmp); + } + + + + + + // FETCH BY DATASET(S) + + @RequestMapping(method = RequestMethod.GET, value = { "/dataset" }) + public @ResponseBody ResponseEntity listDatasets(){ + try { + List allIDs = datasetDao.listAllIDs(); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(allIDs)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Serialization issue: "+ex.getMessage()); + } + } + + + @RequestMapping(method = RequestMethod.GET, value = { "/dataset/{id}" }) + public @ResponseBody ResponseEntity getDataset(@PathVariable("id") String id) { + try { + Dataset ds = datasetDao.read(UUID.fromString(id)); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(ds)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("Erroneous input: "+ex.getMessage()); + } + } + + + /** + * This should be called on extreme cases. It's computationally intensive + */ + @RequestMapping(method = RequestMethod.GET, value = { "/getAllDatasets" }) + public @ResponseBody ResponseEntity getAllDatasets(){ + try { + List allDatasets = datasetDao.getAll(); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(allDatasets)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Serialization issue: "+ex.getMessage()); + } + } + + + @RequestMapping(method = RequestMethod.POST, value = { "/setDataset" }, consumes = "application/json") + public @ResponseBody ResponseEntity setDataset(@RequestBody Dataset dataset) { + String reason = ""; + Dataset storedDataset = null; + //try first to create + try { + storedDataset = datasetDao.create(dataset); + return ResponseEntity.status(HttpStatus.CREATED).body("Created Dataset with id: " + storedDataset.getId()); + } + catch(Exception e) { + reason += e.getMessage(); + //try updating + try { + storedDataset = datasetDao.update(dataset); + return ResponseEntity.status(HttpStatus.CREATED).body("Updated Dataset with id: " + storedDataset.getId()); + } + catch(Exception ex) { + reason += (System.lineSeparator()+e.getMessage()); + return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("Could not create or update Dataset! Reason: " + reason); + } + } + + } + + + // FETCH BY PROJECT(S) + + @RequestMapping(method = RequestMethod.GET, value = { "/project" }) + public @ResponseBody ResponseEntity listProjects(){ + try { + List allIDs = projectDao.listAllIDs(); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(allIDs)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body("Serialization issue: "+ex.getMessage()); + } + } + + + @RequestMapping(method = RequestMethod.GET, value = { "/project/{id}" }) + public @ResponseBody ResponseEntity getProject(@PathVariable("id") String id) { + try { + Project project = projectDao.read(UUID.fromString(id)); + return ResponseEntity.status(HttpStatus.OK).body(new ObjectMapper().writeValueAsString(project)); + } + catch(Exception ex) { + return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("Erroneous input: "+ex.getMessage()); + } + } + + + @RequestMapping(method = RequestMethod.POST, value = { "/setProject" }, consumes = "application/json") + public @ResponseBody ResponseEntity setProject(@RequestBody Project project) { + String reason = ""; + Project storedProject = null; + //try first to create + try { + storedProject = projectDao.create(project); + return ResponseEntity.status(HttpStatus.CREATED).body("Created project with id: " + storedProject.getId()); + } + catch(Exception e) { + reason += e.getMessage(); + //try updating + try { + storedProject = projectDao.update(project); + return ResponseEntity.status(HttpStatus.CREATED).body("Updated project with id: " + storedProject.getId()); + } + catch(Exception ex) { + reason += (System.lineSeparator()+e.getMessage()); + return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("Could not create or update project! Reason: " + reason); + } + } + } + + + +} + diff --git a/dmp-backend/src/main/java/typedefinition/DataType.java b/dmp-backend/src/main/java/typedefinition/DataType.java new file mode 100644 index 000000000..2d488336d --- /dev/null +++ b/dmp-backend/src/main/java/typedefinition/DataType.java @@ -0,0 +1,13 @@ +package typedefinition; + +public enum DataType { + TINY, + SHORT, + INTEGER, + LONG, + DOUBLE, + FLOAT, + DATE, + STRING, + TEXT +} diff --git a/dmp-backend/src/main/java/typedefinition/DatabaseColumnType.java b/dmp-backend/src/main/java/typedefinition/DatabaseColumnType.java new file mode 100644 index 000000000..8e7fec8da --- /dev/null +++ b/dmp-backend/src/main/java/typedefinition/DatabaseColumnType.java @@ -0,0 +1,5 @@ +package typedefinition; + +public interface DatabaseColumnType { + public String getType(DataType dt); +} diff --git a/dmp-backend/src/main/java/typedefinition/PostgreSQLDatabaseColumnType.java b/dmp-backend/src/main/java/typedefinition/PostgreSQLDatabaseColumnType.java new file mode 100644 index 000000000..2c68bd2d4 --- /dev/null +++ b/dmp-backend/src/main/java/typedefinition/PostgreSQLDatabaseColumnType.java @@ -0,0 +1,25 @@ +package typedefinition; + +public class PostgreSQLDatabaseColumnType implements DatabaseColumnType { + + public String getType(DataType dt) { + switch (dt) { + case TINY: + case SHORT: + case INTEGER: + return "integer"; + case LONG: + return "bigint"; + case FLOAT: + case DOUBLE: + return "numeric"; + case DATE: + return "timestamp"; + case STRING: + return "character varying(250)"; + case TEXT: + return "text"; + } + return "character varying(250)"; + } +} diff --git a/dmp-backend/src/main/java/typedefinition/UUIDType.java b/dmp-backend/src/main/java/typedefinition/UUIDType.java new file mode 100644 index 000000000..51e07e8cf --- /dev/null +++ b/dmp-backend/src/main/java/typedefinition/UUIDType.java @@ -0,0 +1,120 @@ +package typedefinition; + +import java.io.Serializable; +import java.sql.PreparedStatement; +import java.sql.ResultSet; +import java.sql.SQLException; +import java.sql.Types; +import java.util.UUID; + +import org.hibernate.HibernateException; +import org.hibernate.engine.spi.SessionImplementor; +import org.hibernate.engine.spi.SharedSessionContractImplementor; +import org.hibernate.usertype.UserType; + +/** + * Currently not used + * + */ +public class UUIDType implements UserType +{ + private final int[] sqlTypesSupported = new int[] { Types.NUMERIC }; + private final String CAST_EXCEPTION_TEXT = " cannot be cast to a java.util.UUID"; + + public int[] sqlTypes() + { + return sqlTypesSupported; + } + + @SuppressWarnings("rawtypes") + public Class returnedClass() + { + return UUID.class; + } + + public boolean equals(Object x, Object y) throws HibernateException + { + if (x == null) return y == null; + else return x.equals(y); + } + + public int hashCode(Object x) throws HibernateException + { + return x == null ? null : x.hashCode(); + } + + public Object nullSafeGet(ResultSet rs, String[] names, Object owner) throws HibernateException, SQLException + { + assert(names.length == 1); + Object value = rs.getObject(names[0]); + if (value == null) return null; + + UUID uuid = UUID.fromString( rs.getString( names[0] ) ); + return rs.wasNull() ? null : uuid; + } + + public void nullSafeSet(PreparedStatement st, Object value, int index) throws HibernateException, SQLException + { + if (value == null) + { + st.setNull(index, Types.NULL); + return; + } + + if (!UUID.class.isAssignableFrom(value.getClass())) + throw new HibernateException(value.getClass().toString() + CAST_EXCEPTION_TEXT); + + UUID uuid = (UUID) value; + st.setObject(index, uuid, Types.OTHER); + } + + public Object deepCopy(Object value) throws HibernateException + { + if (value == null) return null; + UUID uuid = (UUID) value; + return new UUID( uuid.getMostSignificantBits(), uuid.getLeastSignificantBits() ); + } + + public boolean isMutable() + { + return false; + } + + public Serializable disassemble(Object value) throws HibernateException + { + return (Serializable) value; + } + + public Object assemble(Serializable cached, Object owner) throws HibernateException + { + return cached; + } + + public Object replace(Object original, Object target, Object owner) throws HibernateException + { + return original; + } + +// public Object nullSafeGet(ResultSet rs, String[] names, SessionImplementor session, Object owner) +// throws HibernateException, SQLException +// { +// return nullSafeGet(rs, names, owner); +// } +// +// public void nullSafeSet(PreparedStatement st, Object value, int index, SessionImplementor session) +// throws HibernateException, SQLException +// { +// nullSafeSet(st, value, index); +// +// } + + public Object nullSafeGet(ResultSet rs, String[] names, SharedSessionContractImplementor session, Object owner) + throws HibernateException, SQLException { + return nullSafeGet(rs, names, owner); + } + + public void nullSafeSet(PreparedStatement st, Object value, int index, SharedSessionContractImplementor session) + throws HibernateException, SQLException { + nullSafeSet(st, value, index); + } +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/typedefinition/XMLType.java b/dmp-backend/src/main/java/typedefinition/XMLType.java new file mode 100644 index 000000000..ec153d888 --- /dev/null +++ b/dmp-backend/src/main/java/typedefinition/XMLType.java @@ -0,0 +1,89 @@ +package typedefinition; + +import java.io.Serializable; +import java.sql.PreparedStatement; +import java.sql.ResultSet; +import java.sql.SQLException; +import java.sql.Types; + +import org.hibernate.HibernateException; +import org.hibernate.engine.spi.SessionImplementor; +import org.hibernate.engine.spi.SharedSessionContractImplementor; +import org.hibernate.usertype.UserType; + +/** + * Store and retrieve a PostgreSQL "xml" column as a Java string. + */ +public class XMLType implements UserType { + + private final int[] sqlTypesSupported = new int[] { Types.VARCHAR }; + + public int[] sqlTypes() { + return sqlTypesSupported; + } + + public Class returnedClass() { + return String.class; + } + + public boolean equals(Object x, Object y) throws HibernateException { + if (x == null) { + return y == null; + } else { + return x.equals(y); + } + } + + public int hashCode(Object x) throws HibernateException { + return x == null ? null : x.hashCode(); + } + + public Object nullSafeGet(ResultSet rs, String[] names, Object owner) throws HibernateException, SQLException { + assert(names.length == 1); + String xmldoc = rs.getString( names[0] ); + return rs.wasNull() ? null : xmldoc; + } + + public void nullSafeSet(PreparedStatement st, Object value, int index) throws HibernateException, SQLException { + if (value == null) { + st.setNull(index, Types.OTHER); + } else { + st.setObject(index, value, Types.OTHER); + } + } + + public Object deepCopy(Object value) throws HibernateException { + if (value == null) + return null; + return new String( (String)value ); + } + + public boolean isMutable() { + return false; + } + + public Serializable disassemble(Object value) throws HibernateException { + return (String) value; + } + + public Object assemble(Serializable cached, Object owner) throws HibernateException { + return (String) cached; + } + + public Object replace(Object original, Object target, Object owner) throws HibernateException { + return original; + } + + public Object nullSafeGet(ResultSet rs, String[] names, SharedSessionContractImplementor session, Object owner) + throws HibernateException, SQLException + { + return nullSafeGet(rs, names, owner); + } + + public void nullSafeSet(PreparedStatement st, Object value, int index, SharedSessionContractImplementor session) throws HibernateException, SQLException + { + nullSafeSet(st, value, index); + + } + +} \ No newline at end of file diff --git a/dmp-backend/src/main/java/types/SQLXMLType.java b/dmp-backend/src/main/java/types/SQLXMLType.java new file mode 100644 index 000000000..02a56242c --- /dev/null +++ b/dmp-backend/src/main/java/types/SQLXMLType.java @@ -0,0 +1,85 @@ +//package types; +// +//import java.io.Serializable; +//import java.sql.PreparedStatement; +//import java.sql.ResultSet; +//import java.sql.SQLException; +//import java.sql.Types; +//import org.hibernate.HibernateException; +//import org.hibernate.engine.spi.SharedSessionContractImplementor; +// +///** +// * Store and retrieve a PostgreSQL "xml" column as a Java string. +// */ +//public class SQLXMLType implements org.hibernate.usertype.UserType { +// +// private final int[] sqlTypesSupported = new int[] { Types.VARCHAR }; +// +// public int[] sqlTypes() { +// return sqlTypesSupported; +// } +// +// public Class returnedClass() { +// return String.class; +// } +// +// public boolean equals(Object x, Object y) throws HibernateException { +// if (x == null) { +// return y == null; +// } else { +// return x.equals(y); +// } +// } +// +// public int hashCode(Object x) throws HibernateException { +// return x == null ? null : x.hashCode(); +// } +// +// public Object nullSafeGet(ResultSet rs, String[] names, Object owner) throws HibernateException, SQLException { +// assert(names.length == 1); +// String xmldoc = rs.getString( names[0] ); +// return rs.wasNull() ? null : xmldoc; +// } +// +// public void nullSafeSet(PreparedStatement st, Object value, int index) throws HibernateException, SQLException { +// if (value == null) { +// st.setNull(index, Types.OTHER); +// } else { +// st.setObject(index, value, Types.OTHER); +// } +// } +// +// public Object deepCopy(Object value) throws HibernateException { +// if (value == null) +// return null; +// return new String( (String)value ); +// } +// +// public boolean isMutable() { +// return false; +// } +// +// public Serializable disassemble(Object value) throws HibernateException { +// return (String) value; +// } +// +// public Object assemble(Serializable cached, Object owner) throws HibernateException { +// return (String) cached; +// } +// +// public Object replace(Object original, Object target, Object owner) throws HibernateException { +// return original; +// } +// +// public Object nullSafeGet(ResultSet rs, String[] names, SharedSessionContractImplementor session, Object owner) +// throws HibernateException, SQLException { +// // TODO Auto-generated method stub +// return null; +// } +// +// public void nullSafeSet(PreparedStatement st, Object value, int index, SharedSessionContractImplementor session) +// throws HibernateException, SQLException { +// // TODO Auto-generated method stub +// +// } +//} \ No newline at end of file diff --git a/dmp-backend/src/main/resources/META-INF/persistence.xml b/dmp-backend/src/main/resources/META-INF/persistence.xml new file mode 100644 index 000000000..2b2fd0265 --- /dev/null +++ b/dmp-backend/src/main/resources/META-INF/persistence.xml @@ -0,0 +1,13 @@ + + + + + Persistence unit for DPM Backend + + org.hibernate.jpa.HibernatePersistenceProvider + + + \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/WEB-INF/applicationContext.xml b/dmp-backend/src/main/webapp/WEB-INF/applicationContext.xml new file mode 100644 index 000000000..f50459666 --- /dev/null +++ b/dmp-backend/src/main/webapp/WEB-INF/applicationContext.xml @@ -0,0 +1,101 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + ${persistence.jdbc.driver} + ${persistence.jdbc.url} + ${persistence.dbusername} + ${persistence.dbpassword} + ${persistence.hibernate.show_sql} + ${persistence.hibernate.hbm2dll} + ${persistence.hibernate.dialect} + + ${persistence.hibernate.jdbc.batch_size} + ${persistence.hibernate.order_inserts} + ${persistence.hibernate.order_updates} + ${persistence.hibernate.batch_versioned_data} + ${persistence.hibernate.jdbc.batch_versioned_data} + on_close + + ${persistence.hibernate.connectionpool.provider_class} + ${persistence.hibernate.connectionpool.c3p0.min_size} + ${persistence.hibernate.connectionpool.c3p0.max_size} + + 0 + + + ${persistence.hibernate.connectionpool.c3p0.max_statements} + ${persistence.hibernate.connectionpool.c3p0.acquire_retry_attempts} + ${persistence.hibernate.connectionpool.c3p0.acquire_retry_delay} + ${persistence.hibernate.connectionpool.c3p0.idle_test_period} + ${persistence.hibernate.connectionpool.c3p0.break_after_acquire_failure} + ${persistence.hibernate.connectionpool.c3p0.idle_connection_test_period} + ${persistence.hibernate.connectionpool.c3p0.test_connection_on_checkin} + ${persistence.hibernate.connectionpool.c3p0.test_connection_on_checkout} + ${persistence.hibernate.connectionpool.c3p0.preferred_test_query} + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/WEB-INF/dmp-backend-rest-servlet.xml b/dmp-backend/src/main/webapp/WEB-INF/dmp-backend-rest-servlet.xml new file mode 100644 index 000000000..30257cfd3 --- /dev/null +++ b/dmp-backend/src/main/webapp/WEB-INF/dmp-backend-rest-servlet.xml @@ -0,0 +1,42 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/WEB-INF/dmp.properties b/dmp-backend/src/main/webapp/WEB-INF/dmp.properties new file mode 100644 index 000000000..a904f979d --- /dev/null +++ b/dmp-backend/src/main/webapp/WEB-INF/dmp.properties @@ -0,0 +1,46 @@ +##########################Security########################################## +#security.portmapping.http = 7081 +#security.portmapping.https = 7444 +##########################/Security######################################## + +##########################Persistence########################################## +persistence.jdbc.driver = org.postgresql.Driver +persistence.jdbc.url = jdbc:postgresql://localhost:5432/db +persistence.dbusername = db-user +persistence.dbpassword = db-pass +##########################/Persistence########################################## + + +########################Persistence/Hibernate Generic############################# +persistence.hibernate.show_sql = false +persistence.hibernate.hbm2dll = validate +persistence.hibernate.dialect = org.hibernate.dialect.PostgreSQLDialect +#persistence.hibernate.dialect = org.hibernate.spatial.dialect.postgis.PostgisDialect +########################Persistence/Hibernate Generic############################# + + +########################Persistence/Hibernate/Batch############################## +persistence.hibernate.jdbc.batch_size = 30 +persistence.hibernate.order_inserts = true +persistence.hibernate.order_updates = true +persistence.hibernate.batch_versioned_data = true +persistence.hibernate.jdbc.batch_versioned_data = DELAYED_ACQUISITION_AND_RELEASE_AFTER_TRANSACTION +########################Persistence/Hibernate/Batch############################## + + +########################Persistence/Hibernate/Connection pool#################### +persistence.hibernate.connectionpool.provider_class = org.hibernate.service.jdbc.connections.internal.C3P0ConnectionProvider +persistence.hibernate.connectionpool.c3p0.min_size = 5 +persistence.hibernate.connectionpool.c3p0.max_size = 100 +persistence.hibernate.connectionpool.c3p0.timeout = 0 +persistence.hibernate.connectionpool.c3p0.max_statements = 50 +persistence.hibernate.connectionpool.c3p0.acquire_retry_attempts = 30 +persistence.hibernate.connectionpool.c3p0.acquire_retry_delay = 1000 +persistence.hibernate.connectionpool.c3p0.idle_test_period = 3000 +persistence.hibernate.connectionpool.c3p0.break_after_acquire_failure = false +persistence.hibernate.connectionpool.c3p0.idle_connection_test_period = 3600 +persistence.hibernate.connectionpool.c3p0.test_connection_on_checkin = true +persistence.hibernate.connectionpool.c3p0.test_connection_on_checkout = false +persistence.hibernate.connectionpool.c3p0.preferred_test_query = select 1 +########################Persistence/Hibernate/Connection pool#################### + diff --git a/dmp-backend/src/main/webapp/WEB-INF/spring-web-servlet.xml b/dmp-backend/src/main/webapp/WEB-INF/spring-web-servlet.xml new file mode 100644 index 000000000..df78c522e --- /dev/null +++ b/dmp-backend/src/main/webapp/WEB-INF/spring-web-servlet.xml @@ -0,0 +1,27 @@ + + + + + + + /WEB-INF/views/jsp/ + + + .jsp + + + + + + + + \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/WEB-INF/views/jsp/home.jsp b/dmp-backend/src/main/webapp/WEB-INF/views/jsp/home.jsp new file mode 100644 index 000000000..b696ef240 --- /dev/null +++ b/dmp-backend/src/main/webapp/WEB-INF/views/jsp/home.jsp @@ -0,0 +1,368 @@ +<%@ taglib prefix="spring" uri="http://www.springframework.org/tags" %> +<%@ taglib prefix="c" uri="http://java.sun.com/jsp/jstl/core" %> +<%@ taglib uri = "http://java.sun.com/jsp/jstl/functions" prefix = "fn" %> + + + + Digital Management Plans - Backend administration + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ +

Digital Management Plans - Backend administration

+ + + + + + +
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + +
idLabelVersionProjectPreviousContent
${dmp.id}${dmp.label}${dmp.version} + ${dmp.project.id} + ${dmp.previous} + + + + + + + +
+
+ + +
+ + +
+ DMP ${dmp.id} +
+
+ + +
+ + + +
+ +
+ + +
+
+

DatasetProfileRuleset

+
+
+
+ + +
+
+ + +
+
+
+ +
+
+

DatasetProfileViewStyle

+
+
+
+ + +
+
+ + +
+
+
+ +
+
+

DatasetProfile

+
+
+
+ + +
+
+ + +
+
+
+ +
+
+

Project

+
+
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+
+ +
+
+

DMPProfile

+
+
+
+ + +
+
+ + +
+
+
+ + +
+
+

DMP

+
+
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+
+ +
+
+

DataRepository

+
+
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+
+ +
+
+

Registry

+
+
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+
+ +
+
+

Service

+
+
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+ + +
+
+
+ +
+
+

Dataset

+
+
+
+ + +
+
+ + +
+
+ + +
+
+
+ + +
+ +
+ + + +
+ + +
+ + + + + + + \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/WEB-INF/web.xml b/dmp-backend/src/main/webapp/WEB-INF/web.xml new file mode 100644 index 000000000..f900b4a52 --- /dev/null +++ b/dmp-backend/src/main/webapp/WEB-INF/web.xml @@ -0,0 +1,41 @@ + + + dmp-backend + + dmp-backend-rest + org.springframework.web.servlet.DispatcherServlet + 1 + + + dmp-backend-rest + /rest/* + + + org.springframework.web.context.ContextLoaderListener + + + + + spring-web + org.springframework.web.servlet.DispatcherServlet + 1 + + + spring-web + /ui/* + + + org.springframework.web.context.ContextLoaderListener + + + + + contextConfigLocation + + /WEB-INF/applicationContext.xml + + + + 30 + + \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/resources/css/home.css b/dmp-backend/src/main/webapp/resources/css/home.css new file mode 100644 index 000000000..b6a138711 --- /dev/null +++ b/dmp-backend/src/main/webapp/resources/css/home.css @@ -0,0 +1,74 @@ +div.form-group{ + margin-top: 5px; + margin-bottom: 5px; + margin-left: 10px; + margin-right: 10px; +} + + + + +/* + +table { + font-family: "Helvetica", "Lucida Sans", "Lucida Sans Unicode", "Luxi Sans", Tahoma, sans-serif; + box-shadow: 1px 1px 10px rgba(0,0,0,0.5); + border-collapse: collapse; + border-spacing: 0; +} +table { + margin: auto; +} +table, td, th { + padding: 7px; + text-align: center; + border: 1px solid rgb(8,48,107); +} +th { + background-color: rgb(8,81,156); + color: white; +} + +*/ + +/* + .node { + cursor: pointer; + } + + .overlay{ + background-color:#EEE; + } + + .node circle { + fill: #fff; + stroke: steelblue; + stroke-width: 1.5px; + } + + .node text { + font-size:10px; + font-family:sans-serif; + } + + .link { + fill: none; + stroke: #ccc; + stroke-width: 1.5px; + } + + .templink { + fill: none; + stroke: red; + stroke-width: 3px; + } + + .ghostCircle.show{ + display:block; + } + + .ghostCircle, .activeDrag .ghostCircle{ + display: none; + } + + */ \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/resources/css/jquery.json-viewer.css b/dmp-backend/src/main/webapp/resources/css/jquery.json-viewer.css new file mode 100644 index 000000000..2c72ae5fa --- /dev/null +++ b/dmp-backend/src/main/webapp/resources/css/jquery.json-viewer.css @@ -0,0 +1,47 @@ +/* Syntax highlighting for JSON objects */ +ul.json-dict, ol.json-array { + list-style-type: none; + margin: 0 0 0 1px; + border-left: 1px dotted #ccc; + padding-left: 2em; +} +.json-string { + color: #0B7500; +} +.json-literal { + color: #1A01CC; + font-weight: bold; +} + +/* Toggle button */ +a.json-toggle { + position: relative; + color: inherit; + text-decoration: none; +} +a.json-toggle:focus { + outline: none; +} +a.json-toggle:before { + color: #aaa; + content: "\25BC"; /* down arrow */ + position: absolute; + display: inline-block; + width: 1em; + left: -1em; +} +a.json-toggle.collapsed:before { + transform: rotate(-90deg); /* Use rotated down arrow, prevents right arrow appearing smaller than down arrow in some browsers */ + -ms-transform: rotate(-90deg); + -webkit-transform: rotate(-90deg); +} + +/* Collapsable placeholder links */ +a.json-placeholder { + color: #aaa; + padding: 0 1em; + text-decoration: none; +} +a.json-placeholder:hover { + text-decoration: underline; +} diff --git a/dmp-backend/src/main/webapp/resources/js/bootstrap-notify.min.js b/dmp-backend/src/main/webapp/resources/js/bootstrap-notify.min.js new file mode 100644 index 000000000..01e7f3091 --- /dev/null +++ b/dmp-backend/src/main/webapp/resources/js/bootstrap-notify.min.js @@ -0,0 +1 @@ +!function(t){"function"==typeof define&&define.amd?define(["jquery"],t):t("object"==typeof exports?require("jquery"):jQuery)}(function(t){function s(s){var e=!1;return t('[data-notify="container"]').each(function(i,n){var a=t(n),o=a.find('[data-notify="title"]').text().trim(),r=a.find('[data-notify="message"]').html().trim(),l=o===t("
"+s.settings.content.title+"
").html().trim(),d=r===t("
"+s.settings.content.message+"
").html().trim(),g=a.hasClass("alert-"+s.settings.type);return l&&d&&g&&(e=!0),!e}),e}function e(e,n,a){var o={content:{message:"object"==typeof n?n.message:n,title:n.title?n.title:"",icon:n.icon?n.icon:"",url:n.url?n.url:"#",target:n.target?n.target:"-"}};a=t.extend(!0,{},o,a),this.settings=t.extend(!0,{},i,a),this._defaults=i,"-"===this.settings.content.target&&(this.settings.content.target=this.settings.url_target),this.animations={start:"webkitAnimationStart oanimationstart MSAnimationStart animationstart",end:"webkitAnimationEnd oanimationend MSAnimationEnd animationend"},"number"==typeof this.settings.offset&&(this.settings.offset={x:this.settings.offset,y:this.settings.offset}),(this.settings.allow_duplicates||!this.settings.allow_duplicates&&!s(this))&&this.init()}var 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s=this.settings.content;this.$ele=t(String.format(this.settings.template,this.settings.type,s.title,s.message,s.url,s.target)),this.$ele.attr("data-notify-position",this.settings.placement.from+"-"+this.settings.placement.align),this.settings.allow_dismiss||this.$ele.find('[data-notify="dismiss"]').css("display","none"),(this.settings.delay<=0&&!this.settings.showProgressbar||!this.settings.showProgressbar)&&this.$ele.find('[data-notify="progressbar"]').remove()},setIcon:function(){"class"===this.settings.icon_type.toLowerCase()?this.$ele.find('[data-notify="icon"]').addClass(this.settings.content.icon):this.$ele.find('[data-notify="icon"]').is("img")?this.$ele.find('[data-notify="icon"]').attr("src",this.settings.content.icon):this.$ele.find('[data-notify="icon"]').append('Notify Icon')},styleDismiss:function(){this.$ele.find('[data-notify="dismiss"]').css({position:"absolute",right:"10px",top:"5px",zIndex:this.settings.z_index+2})},styleURL:function(){this.$ele.find('[data-notify="url"]').css({backgroundImage:"url(data:image/gif;base64,R0lGODlhAQABAIAAAAAAAP///yH5BAEAAAAALAAAAAABAAEAAAIBRAA7)",height:"100%",left:0,position:"absolute",top:0,width:"100%",zIndex:this.settings.z_index+1})},placement:function(){var s=this,e=this.settings.offset.y,i={display:"inline-block",margin:"0px auto",position:this.settings.position?this.settings.position:"body"===this.settings.element?"fixed":"absolute",transition:"all .5s 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s=this;if(this.$ele.find('[data-notify="dismiss"]').on("click",function(){s.close()}),this.$ele.mouseover(function(){t(this).data("data-hover","true")}).mouseout(function(){t(this).data("data-hover","false")}),this.$ele.data("data-hover","false"),this.settings.delay>0){s.$ele.data("notify-delay",s.settings.delay);var e=setInterval(function(){var t=parseInt(s.$ele.data("notify-delay"))-s.settings.timer;if("false"===s.$ele.data("data-hover")&&"pause"===s.settings.mouse_over||"pause"!=s.settings.mouse_over){var i=(s.settings.delay-t)/s.settings.delay*100;s.$ele.data("notify-delay",t),s.$ele.find('[data-notify="progressbar"] > div').attr("aria-valuenow",i).css("width",i+"%")}t<=-s.settings.timer&&(clearInterval(e),s.close())},s.settings.timer)}},close:function(){var s=this,e=parseInt(this.$ele.css(this.settings.placement.from)),i=!1;this.$ele.attr("data-closing","true").addClass(this.settings.animate.exit),s.reposition(e),t.isFunction(s.settings.onClose)&&s.settings.onClose.call(this.$ele),this.$ele.one(this.animations.start,function(){i=!0}).one(this.animations.end,function(){t(this).remove(),t.isFunction(s.settings.onClosed)&&s.settings.onClosed.call(this)}),setTimeout(function(){i||(s.$ele.remove(),s.settings.onClosed&&s.settings.onClosed(s.$ele))},600)},reposition:function(s){var e=this,i='[data-notify-position="'+this.settings.placement.from+"-"+this.settings.placement.align+'"]:not([data-closing="true"])',n=this.$ele.nextAll(i);this.settings.newest_on_top===!0&&(n=this.$ele.prevAll(i)),n.each(function(){t(this).css(e.settings.placement.from,s),s=parseInt(s)+parseInt(e.settings.spacing)+t(this).outerHeight()})}}),t.notify=function(t,s){var i=new e(this,t,s);return i.notify},t.notifyDefaults=function(s){return i=t.extend(!0,{},i,s)},t.notifyClose=function(s){"warning"===s&&(s="danger"),"undefined"==typeof s||"all"===s?t("[data-notify]").find('[data-notify="dismiss"]').trigger("click"):"success"===s||"info"===s||"warning"===s||"danger"===s?t(".alert-"+s+"[data-notify]").find('[data-notify="dismiss"]').trigger("click"):s?t(s+"[data-notify]").find('[data-notify="dismiss"]').trigger("click"):t('[data-notify-position="'+s+'"]').find('[data-notify="dismiss"]').trigger("click")},t.notifyCloseExcept=function(s){"warning"===s&&(s="danger"),"success"===s||"info"===s||"warning"===s||"danger"===s?t("[data-notify]").not(".alert-"+s).find('[data-notify="dismiss"]').trigger("click"):t("[data-notify]").not(s).find('[data-notify="dismiss"]').trigger("click")}}); \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/resources/js/home.js b/dmp-backend/src/main/webapp/resources/js/home.js new file mode 100644 index 000000000..a26a94ce9 --- /dev/null +++ b/dmp-backend/src/main/webapp/resources/js/home.js @@ -0,0 +1,42 @@ + + +$(document).ready(function(){ + $('[data-toggle="tooltip"]').tooltip({html:true}); +}); + + +function clickedShow(dmp){ + $("#jsonModal").find("div.modal-body > p").jsonViewer(dmp, {withQuotes: true, collapsed: true}); +} + +function clickedDelete(id){ + console.log(id); + $.notify( + { + title: "Deleting is disabled
", + message: "Deleting DMPs is currently not allowed." + }, + { + type: 'danger' + } + ); + +} + +function clickedEdit(id){ + console.log(id); + $.notify({ + title: "Editing is disabled
", + message: "Editing DMPs is currently not allowed." + }); +} + + + +function loadTile(data){ + + if($("#tile-"+data.id).html() == ''){ + $("#tile-"+data.id).jsonViewer(data, {withQuotes: true, collapsed: true}); + } + +} \ No newline at end of file diff --git a/dmp-backend/src/main/webapp/resources/js/jquery.json-viewer.js b/dmp-backend/src/main/webapp/resources/js/jquery.json-viewer.js new file mode 100644 index 000000000..3ecbc3f7b --- /dev/null +++ b/dmp-backend/src/main/webapp/resources/js/jquery.json-viewer.js @@ -0,0 +1,148 @@ +/** + * jQuery json-viewer + * @author: Alexandre Bodelot + */ +(function($){ + + /** + * Check if arg is either an array with at least 1 element, or a dict with at least 1 key + * @return boolean + */ + function isCollapsable(arg) { + return arg instanceof Object && Object.keys(arg).length > 0; + } + + /** + * Check if a string represents a valid url + * @return boolean + */ + function isUrl(string) { + var regexp = /^(ftp|http|https):\/\/(\w+:{0,1}\w*@)?(\S+)(:[0-9]+)?(\/|\/([\w#!:.?+=&%@!\-\/]))?/; + return regexp.test(string); + } + + /** + * Transform a json object into html representation + * @return string + */ + function json2html(json, options) { + var html = ''; + if (typeof json === 'string') { + /* Escape tags */ + json = json.replace(/&/g, '&').replace(//g, '>'); + if (isUrl(json)) + html += '' + json + ''; + else + html += '"' + json + '"'; + } + else if (typeof json === 'number') { + html += '' + json + ''; + } + else if (typeof json === 'boolean') { + html += '' + json + ''; + } + else if (json === null) { + html += 'null'; + } + else if (json instanceof Array) { + if (json.length > 0) { + html += '[
    '; + for (var i = 0; i < json.length; ++i) { + html += '
  1. '; + /* Add toggle button if item is collapsable */ + if (isCollapsable(json[i])) { + html += ''; + } + html += json2html(json[i], options); + /* Add comma if item is not last */ + if (i < json.length - 1) { + html += ','; + } + html += '
    2. '; + } + html += '
]'; + } + else { + html += '[]'; + } + } + else if (typeof json === 'object') { + var key_count = Object.keys(json).length; + if (key_count > 0) { + html += '{
    '; + for (var key in json) { + if (json.hasOwnProperty(key)) { + html += '
  • '; + var keyRepr = options.withQuotes ? + '"' + key + '"' : key; + /* Add toggle button if item is collapsable */ + if (isCollapsable(json[key])) { + html += '' + keyRepr + ''; + } + else { + html += keyRepr; + } + html += ': ' + json2html(json[key], options); + /* Add comma if item is not last */ + if (--key_count > 0) + html += ','; + html += '
    • '; + } + } + html += '
}'; + } + else { + html += '{}'; + } + } + return html; + } + + /** + * jQuery plugin method + * @param json: a javascript object + * @param options: an optional options hash + */ + $.fn.jsonViewer = function(json, options) { + options = options || {}; + + /* jQuery chaining */ + return this.each(function() { + + /* Transform to HTML */ + var html = json2html(json, options); + if (isCollapsable(json)) + html = '' + html; + + /* Insert HTML in target DOM element */ + $(this).html(html); + + /* Bind click on toggle buttons */ + $(this).off('click'); + $(this).on('click', 'a.json-toggle', function() { + var target = $(this).toggleClass('collapsed').siblings('ul.json-dict, ol.json-array'); + target.toggle(); + if (target.is(':visible')) { + target.siblings('.json-placeholder').remove(); + } + else { + var count = target.children('li').length; + var placeholder = count + (count > 1 ? ' items' : ' item'); + target.after('' + placeholder + ''); + } + return false; + }); + + /* Simulate click on toggle button when placeholder is clicked */ + $(this).on('click', 'a.json-placeholder', function() { + $(this).siblings('a.json-toggle').click(); + return false; + }); + + if (options.collapsed == true) { + /* Trigger click to collapse all nodes */ + $(this).find('a.json-toggle').click(); + } + }); + }; +})(jQuery); diff --git a/dmp-frontend/.angular-cli.json b/dmp-frontend/.angular-cli.json new file mode 100644 index 000000000..9e16abc32 --- /dev/null +++ b/dmp-frontend/.angular-cli.json @@ -0,0 +1,65 @@ +{ + "$schema": "./node_modules/@angular/cli/lib/config/schema.json", + "project": { + "name": "forms-cli" + }, + "apps": [ + { + "root": "src", + "outDir": "dist", + "assets": [ + "assets", + "favicon.ico" + ], + "index": "index.html", + "main": "main.ts", + "polyfills": "polyfills.ts", + "test": "test.ts", + "tsconfig": "tsconfig.app.json", + "testTsconfig": "tsconfig.spec.json", + "prefix": "app", + "styles": [ + "./../node_modules/bootstrap/dist/css/bootstrap.min.css", + "styles.css" + ], + "scripts": [ + "./../node_modules/jquery/dist/jquery.min.js", + "./../node_modules/bootstrap/dist/js/bootstrap.min.js", + "./assets/xml2json.min.js" + ], + "environmentSource": "environments/environment.ts", + "environments": { + "dev": "environments/environment.ts", + "prod": "environments/environment.prod.ts" + } + } + ], + "e2e": { + "protractor": { + "config": "./protractor.conf.js" + } + }, + "lint": [ + { + "project": "src/tsconfig.app.json", + "exclude": "**/node_modules/**" + }, + { + "project": "src/tsconfig.spec.json", + "exclude": "**/node_modules/**" + }, + { + "project": "e2e/tsconfig.e2e.json", + "exclude": "**/node_modules/**" + } + ], + "test": { + "karma": { + "config": "./karma.conf.js" + } + }, + "defaults": { + "styleExt": "css", + "component": {} + } +} diff --git a/dmp-frontend/.editorconfig b/dmp-frontend/.editorconfig new file mode 100644 index 000000000..6e87a003d --- /dev/null +++ b/dmp-frontend/.editorconfig @@ -0,0 +1,13 @@ +# Editor configuration, see http://editorconfig.org +root = true + +[*] +charset = utf-8 +indent_style = space +indent_size = 2 +insert_final_newline = true +trim_trailing_whitespace = true + +[*.md] +max_line_length = off +trim_trailing_whitespace = false diff --git a/dmp-frontend/.gitignore b/dmp-frontend/.gitignore new file mode 100644 index 000000000..6b6681430 --- /dev/null +++ b/dmp-frontend/.gitignore @@ -0,0 +1,43 @@ +# See http://help.github.com/ignore-files/ for more about ignoring files. + +# compiled output +/dist +/tmp +/out-tsc + +# dependencies +/node_modules + +# IDEs and editors +/.idea +.project +.classpath +.c9/ +*.launch +.settings/ +*.sublime-workspace + +# IDE - VSCode +.vscode/* +!.vscode/settings.json +!.vscode/tasks.json +!.vscode/launch.json +!.vscode/extensions.json + +# misc +/.sass-cache +/connect.lock +/coverage +/libpeerconnection.log +npm-debug.log +testem.log +/typings +yarn-error.log + +# e2e +/e2e/*.js +/e2e/*.map + +# System Files +.DS_Store +Thumbs.db diff --git a/dmp-frontend/README.md b/dmp-frontend/README.md new file mode 100644 index 000000000..f4b375992 --- /dev/null +++ b/dmp-frontend/README.md @@ -0,0 +1,28 @@ +# FormsCli + +This project was generated with [Angular CLI](https://github.com/angular/angular-cli) version 1.3.1. + +## Development server + +Run `ng serve` for a dev server. Navigate to `http://localhost:4200/`. The app will automatically reload if you change any of the source files. + +## Code scaffolding + +Run `ng generate component component-name` to generate a new component. You can also use `ng generate directive|pipe|service|class|guard|interface|enum|module`. + +## Build + +Run `ng build` to build the project. The build artifacts will be stored in the `dist/` directory. Use the `-prod` flag for a production build. + +## Running unit tests + +Run `ng test` to execute the unit tests via [Karma](https://karma-runner.github.io). + +## Running end-to-end tests + +Run `ng e2e` to execute the end-to-end tests via [Protractor](http://www.protractortest.org/). +Before running the tests make sure you are serving the app via `ng serve`. + +## Further help + +To get more help on the Angular CLI use `ng help` or go check out the [Angular CLI README](https://github.com/angular/angular-cli/blob/master/README.md). diff --git a/dmp-frontend/e2e/app.e2e-spec.ts b/dmp-frontend/e2e/app.e2e-spec.ts new file mode 100644 index 000000000..cde64bfdf --- /dev/null +++ b/dmp-frontend/e2e/app.e2e-spec.ts @@ -0,0 +1,14 @@ +import { AppPage } from './app.po'; + +describe('forms-cli App', () => { + let page: AppPage; + + beforeEach(() => { + page = new AppPage(); + }); + + it('should display welcome message', () => { + page.navigateTo(); + expect(page.getParagraphText()).toEqual('Welcome to app!'); + }); +}); diff --git a/dmp-frontend/e2e/app.po.ts b/dmp-frontend/e2e/app.po.ts new file mode 100644 index 000000000..82ea75ba5 --- /dev/null +++ b/dmp-frontend/e2e/app.po.ts @@ -0,0 +1,11 @@ +import { browser, by, element } from 'protractor'; + +export class AppPage { + navigateTo() { + return browser.get('/'); + } + + getParagraphText() { + return element(by.css('app-root h1')).getText(); + } +} diff --git a/dmp-frontend/e2e/tsconfig.e2e.json b/dmp-frontend/e2e/tsconfig.e2e.json new file mode 100644 index 000000000..1d9e5edf0 --- /dev/null +++ b/dmp-frontend/e2e/tsconfig.e2e.json @@ -0,0 +1,14 @@ +{ + "extends": "../tsconfig.json", + "compilerOptions": { + "outDir": "../out-tsc/e2e", + "baseUrl": "./", + "module": "commonjs", + "target": "es5", + "types": [ + "jasmine", + "jasminewd2", + "node" + ] + } +} diff --git a/dmp-frontend/karma.conf.js b/dmp-frontend/karma.conf.js new file mode 100644 index 000000000..af139fada --- /dev/null +++ b/dmp-frontend/karma.conf.js @@ -0,0 +1,33 @@ +// Karma configuration file, see link for more information +// https://karma-runner.github.io/1.0/config/configuration-file.html + +module.exports = function (config) { + config.set({ + basePath: '', + frameworks: ['jasmine', '@angular/cli'], + plugins: [ + require('karma-jasmine'), + require('karma-chrome-launcher'), + require('karma-jasmine-html-reporter'), + require('karma-coverage-istanbul-reporter'), + require('@angular/cli/plugins/karma') + ], + client:{ + clearContext: false // leave Jasmine Spec Runner output visible in browser + }, + coverageIstanbulReporter: { + reports: [ 'html', 'lcovonly' ], + fixWebpackSourcePaths: true + }, + angularCli: { + environment: 'dev' + }, + reporters: ['progress', 'kjhtml'], + port: 9876, + colors: true, + logLevel: config.LOG_INFO, + autoWatch: true, + browsers: ['Chrome'], + singleRun: false + }); +}; diff --git a/dmp-frontend/package-lock.json b/dmp-frontend/package-lock.json new 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"^2.4.1", + "jquery": "^3.2.1", + "rxjs": "^5.4.2", + "zone.js": "^0.8.17" + }, + "devDependencies": { + "@angular/cli": "1.3.1", + "@angular/compiler-cli": "^4.3.6", + "@angular/language-service": "^4.3.6", + "@types/jasmine": "~2.5.53", + "@types/jasminewd2": "~2.0.2", + "@types/node": "^6.0.88", + "angular-ide": "^0.9.31", + "codelyzer": "~3.1.1", + "jasmine-core": "~2.6.2", + "jasmine-spec-reporter": "~4.1.0", + "karma": "~1.7.0", + "karma-chrome-launcher": "~2.1.1", + "karma-cli": "~1.0.1", + "karma-coverage-istanbul-reporter": "^1.2.1", + "karma-jasmine": "~1.1.0", + "karma-jasmine-html-reporter": "^0.2.2", + "protractor": "~5.1.2", + "ts-node": "~3.2.0", + "tslint": "~5.3.2", + "typescript": "~2.3.3" + } +} diff --git a/dmp-frontend/protractor.conf.js b/dmp-frontend/protractor.conf.js new file mode 100644 index 000000000..7ee3b5ee8 --- /dev/null +++ b/dmp-frontend/protractor.conf.js @@ -0,0 +1,28 @@ +// Protractor configuration file, see link for more information +// https://github.com/angular/protractor/blob/master/lib/config.ts + +const { SpecReporter } = require('jasmine-spec-reporter'); + +exports.config = { + allScriptsTimeout: 11000, + specs: [ + './e2e/**/*.e2e-spec.ts' + ], + capabilities: { + 'browserName': 'chrome' + }, + directConnect: true, + baseUrl: 'http://localhost:4200/', + framework: 'jasmine', + jasmineNodeOpts: { + showColors: true, + defaultTimeoutInterval: 30000, + print: function() {} + }, + onPrepare() { + require('ts-node').register({ + project: 'e2e/tsconfig.e2e.json' + }); + jasmine.getEnv().addReporter(new SpecReporter({ spec: { displayStacktrace: true } })); + } +}; diff --git a/dmp-frontend/src/app/app.component.css b/dmp-frontend/src/app/app.component.css new file mode 100644 index 000000000..6e45e32e9 --- /dev/null +++ b/dmp-frontend/src/app/app.component.css @@ -0,0 +1 @@ +[hidden] { display: none ;} \ No newline at end of file diff --git a/dmp-frontend/src/app/app.component.spec.ts b/dmp-frontend/src/app/app.component.spec.ts new file mode 100644 index 000000000..9510495a2 --- /dev/null +++ b/dmp-frontend/src/app/app.component.spec.ts @@ -0,0 +1,32 @@ +import { TestBed, async } from '@angular/core/testing'; + +import { AppComponent } from './app.component'; + +describe('AppComponent', () => { + beforeEach(async(() => { + TestBed.configureTestingModule({ + declarations: [ + AppComponent + ], + }).compileComponents(); + })); + + it('should create the app', async(() => { + const fixture = TestBed.createComponent(AppComponent); + const app = fixture.debugElement.componentInstance; + expect(app).toBeTruthy(); + })); + + it(`should have as title 'app'`, async(() => { + const fixture = TestBed.createComponent(AppComponent); + const app = fixture.debugElement.componentInstance; + expect(app.title).toEqual('app'); + })); + + it('should render title in a h1 tag', async(() => { + const fixture = TestBed.createComponent(AppComponent); + fixture.detectChanges(); + const compiled = fixture.debugElement.nativeElement; + expect(compiled.querySelector('h1').textContent).toContain('Welcome to app!'); + })); +}); diff --git a/dmp-frontend/src/app/app.component.ts b/dmp-frontend/src/app/app.component.ts new file mode 100644 index 000000000..13bd3a448 --- /dev/null +++ b/dmp-frontend/src/app/app.component.ts @@ -0,0 +1,31 @@ +import { Component } from '@angular/core'; +import { ServerService } from './services/server.service'; +import { FieldBase } from '../app/form/fields/field-base'; +import { JsonObjest } from '../app/entities/JsonObject.class'; + + +@Component({ + selector: 'app-root', + template: ` +
+ +
+ `, + providers: [] +}) +export class AppComponent { + + fields: any[]; + + //constructor(service: FieldService) { + //this.fields = service.getFields(); + // this.serverService.getHTTPFields() + // .subscribe( + // (data:any[])=> { + // console.log(data); + // fieldService.getFieldVisibility(data); + // }, + // (error) => console.log(error) + // ); + //} +} diff --git a/dmp-frontend/src/app/app.module.ts b/dmp-frontend/src/app/app.module.ts new file mode 100644 index 000000000..baae34b3e --- /dev/null +++ b/dmp-frontend/src/app/app.module.ts @@ -0,0 +1,36 @@ +import { BrowserModule } from '@angular/platform-browser'; +import { NgModule } from '@angular/core'; +import { FormsModule, ReactiveFormsModule } from '@angular/forms'; +import { HttpClientModule } from '@angular/common/http'; +import { HttpModule } from '@angular/http'; + +import { AppComponent } from './app.component'; +import { DynamicFormComponent } from './form/dynamic-form.component'; +import { DynamicFormFieldComponent } from './form/fields/dynamic-form-field.component'; +import { ServerService } from './services/server.service'; +import { FieldVisibility } from './services/fieldVisibility.service'; +import { dataModelBuilder } from './services/dataModelBuilder.service'; +import { DynamicFormGroupComponent } from './form/dynamic-form-group/dynamic-form-group.component'; + + +@NgModule({ + declarations: [ + AppComponent, + DynamicFormComponent, + DynamicFormFieldComponent, + DynamicFormGroupComponent + ], + imports: [ + BrowserModule, + ReactiveFormsModule, + FormsModule, + HttpModule, + HttpClientModule + ], + providers: [ServerService, FieldVisibility, dataModelBuilder], + bootstrap: [AppComponent] +}) +export class AppModule { + constructor() { + } +} diff --git a/dmp-frontend/src/app/entities/DataModel.ts b/dmp-frontend/src/app/entities/DataModel.ts new file mode 100644 index 000000000..c2dde07be --- /dev/null +++ b/dmp-frontend/src/app/entities/DataModel.ts @@ -0,0 +1,19 @@ +import { GroupBase } from '../form/dynamic-form-group/group-base'; +import { FieldBase } from '../form/fields/field-base'; +import { Attribute } from './model/attribute'; + +export class DataModel { + + groups: GroupBase[] = []; + fields: FieldBase[] = []; + semanticAttr: Attribute[]; + + //need to add more class fields to describe the remaining elements of the json object fetched from the service. + //e.g. the current dataset's metadata information, the DataRepository description information, etc + + + constructor(){ + } + + +} diff --git a/dmp-frontend/src/app/entities/JsonObject.class.ts b/dmp-frontend/src/app/entities/JsonObject.class.ts new file mode 100644 index 000000000..401fb5d9d --- /dev/null +++ b/dmp-frontend/src/app/entities/JsonObject.class.ts @@ -0,0 +1,10 @@ +import {Title} from "../../app/entities/view/viewTitle.view"; +import {ViewStyle} from "../../app/entities/view/viewStyle.view"; + +export class JsonObjest { + groups: any[]; + fields: any[]; + title: Title; + viewStyle: ViewStyle; + renderStyle: string; +} diff --git a/dmp-frontend/src/app/entities/common/rule.ts b/dmp-frontend/src/app/entities/common/rule.ts new file mode 100644 index 000000000..770f8ed5b --- /dev/null +++ b/dmp-frontend/src/app/entities/common/rule.ts @@ -0,0 +1,13 @@ +import { Injectable } from '@angular/core'; +import {RuleStyle} from './rulestyle'; + +export class Rule { + ruleType: string; + ruleStyle: RuleStyle; + method: string; + ordinal: number; + target: string; + range: any[2]; + ruleText: string; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/common/rulestyle.ts b/dmp-frontend/src/app/entities/common/rulestyle.ts new file mode 100644 index 000000000..b0c3b204a --- /dev/null +++ b/dmp-frontend/src/app/entities/common/rulestyle.ts @@ -0,0 +1,5 @@ + +export enum RuleStyle { + existence, + regex +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/datasetprofile.ts b/dmp-frontend/src/app/entities/datasetprofile.ts new file mode 100644 index 000000000..558bbbfa6 --- /dev/null +++ b/dmp-frontend/src/app/entities/datasetprofile.ts @@ -0,0 +1,13 @@ +import { Injectable } from '@angular/core'; +import { Func } from './functions/func'; +import { Model } from './model/model'; +import { View } from './view2/view'; + +@Injectable() +export class DatasetProfile{ + + view: View; + model: Model; + func: Func[]; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/functions/func.ts b/dmp-frontend/src/app/entities/functions/func.ts new file mode 100644 index 000000000..7d76b176d --- /dev/null +++ b/dmp-frontend/src/app/entities/functions/func.ts @@ -0,0 +1,9 @@ + + +export class Func { + + id: string; + signature:string; + code: string; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/model/attribute.ts b/dmp-frontend/src/app/entities/model/attribute.ts new file mode 100644 index 000000000..1fd60f550 --- /dev/null +++ b/dmp-frontend/src/app/entities/model/attribute.ts @@ -0,0 +1,17 @@ +import { Injectable } from '@angular/core'; +import {Rule} from '../common/rule'; +import { Source } from './source'; + +@Injectable() +export class Attribute { + id: string; + datatype:string; + ordinal:number; + defaultValue: any; + multiplicityMin: number; + multiplicityMax: number; + validationType: any; + validation : Rule[]; + source: Source[]; + +} diff --git a/dmp-frontend/src/app/entities/model/datatype.ts b/dmp-frontend/src/app/entities/model/datatype.ts new file mode 100644 index 000000000..c4a2f1a17 --- /dev/null +++ b/dmp-frontend/src/app/entities/model/datatype.ts @@ -0,0 +1,9 @@ +import { Injectable } from '@angular/core'; +import { DatatypeField } from './datatypefield'; + +@Injectable() +export class Datatype { + id: string; + fields: DatatypeField[]; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/model/datatypefield.ts b/dmp-frontend/src/app/entities/model/datatypefield.ts new file mode 100644 index 000000000..102247e2a --- /dev/null +++ b/dmp-frontend/src/app/entities/model/datatypefield.ts @@ -0,0 +1,9 @@ +import { Injectable } from '@angular/core'; + +@Injectable() +export class DatatypeField{ + id: string; + ordinal: number; + datatype: string; + +} diff --git a/dmp-frontend/src/app/entities/model/model.ts b/dmp-frontend/src/app/entities/model/model.ts new file mode 100644 index 000000000..9f9d98710 --- /dev/null +++ b/dmp-frontend/src/app/entities/model/model.ts @@ -0,0 +1,11 @@ +import { Injectable } from '@angular/core'; +import { Attribute } from './attribute'; +import { Datatype } from './datatype'; +import { Rule } from '../common/rule'; + +@Injectable() +export class Model { + attributes : Attribute[]; + rules: Rule[]; + datatypes : Datatype[]; +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/model/param.ts b/dmp-frontend/src/app/entities/model/param.ts new file mode 100644 index 000000000..fdabf4446 --- /dev/null +++ b/dmp-frontend/src/app/entities/model/param.ts @@ -0,0 +1,7 @@ +import { Injectable } from '@angular/core'; + +@Injectable() +export class Param { + id: string; + value: string; +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/model/source.ts b/dmp-frontend/src/app/entities/model/source.ts new file mode 100644 index 000000000..b2df7d217 --- /dev/null +++ b/dmp-frontend/src/app/entities/model/source.ts @@ -0,0 +1,13 @@ + +import { Injectable } from '@angular/core'; +import { Param } from './param'; + +@Injectable() +export class Source { + id: string; + sourceType:string; + refid: string; + behaviour: string; + params: Param[]; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/plandefinition.class.ts b/dmp-frontend/src/app/entities/plandefinition.class.ts new file mode 100644 index 000000000..104a81da5 --- /dev/null +++ b/dmp-frontend/src/app/entities/plandefinition.class.ts @@ -0,0 +1,9 @@ +import {ViewStyleProfile} from "../../app/entities/view/viewProfile.view"; + +class PlanDefinition{ + +viewStyle: ViewStyleProfile; +dataModel:{}; +rules:{}; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view/field.view.ts b/dmp-frontend/src/app/entities/view/field.view.ts new file mode 100644 index 000000000..c441c03ea --- /dev/null +++ b/dmp-frontend/src/app/entities/view/field.view.ts @@ -0,0 +1,14 @@ +import {Title} from "../../../app/entities/view/viewTitle.view"; +import {ViewStyle} from "../../../app/entities/view/viewStyle.view"; + +export class Field { + description: {}; + extendedDescription:{}; + title:Title; + viewStyle:ViewStyle; + visible:{}; + group:string; + id:string; + ordinal:string; + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view/viewFieldGroup.view.ts b/dmp-frontend/src/app/entities/view/viewFieldGroup.view.ts new file mode 100644 index 000000000..6901936cf --- /dev/null +++ b/dmp-frontend/src/app/entities/view/viewFieldGroup.view.ts @@ -0,0 +1,11 @@ +import {Title} from "../../../app/entities/view/viewTitle.view"; +import {GroupVisibility} from "../../../app/entities/view/viewGrVisibility.view"; + +export class FieldGroup{ + description: {}; + extendedDescription:{}; + title: Title; + visible: GroupVisibility; + id: string; + ordinal: string; +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view/viewGrVisibility.view.ts b/dmp-frontend/src/app/entities/view/viewGrVisibility.view.ts new file mode 100644 index 000000000..91d1d3b83 --- /dev/null +++ b/dmp-frontend/src/app/entities/view/viewGrVisibility.view.ts @@ -0,0 +1,4 @@ +export class GroupVisibility{ + rules: any[]; + style: string; +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view/viewProfile.view.ts b/dmp-frontend/src/app/entities/view/viewProfile.view.ts new file mode 100644 index 000000000..fbd47bea2 --- /dev/null +++ b/dmp-frontend/src/app/entities/view/viewProfile.view.ts @@ -0,0 +1,8 @@ +import {Field} from "../../../app/entities/view/field.view"; +import {FieldGroup} from "../../../app/entities/view/viewFieldGroup.view"; + +export class ViewStyleProfile{ + + fieldGroup: FieldGroup + field: Field +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view/viewStyle.view.ts b/dmp-frontend/src/app/entities/view/viewStyle.view.ts new file mode 100644 index 000000000..cd0814ec5 --- /dev/null +++ b/dmp-frontend/src/app/entities/view/viewStyle.view.ts @@ -0,0 +1,4 @@ +export class ViewStyle{ + _cssclass:string; + _renderstyle:string; +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view/viewTitle.view.ts b/dmp-frontend/src/app/entities/view/viewTitle.view.ts new file mode 100644 index 000000000..74de1b099 --- /dev/null +++ b/dmp-frontend/src/app/entities/view/viewTitle.view.ts @@ -0,0 +1,3 @@ +export class Title { + __cdata:string +} \ No newline at end of file diff --git a/dmp-frontend/src/app/entities/view2/field.ts b/dmp-frontend/src/app/entities/view2/field.ts new file mode 100644 index 000000000..30c6f5d15 --- /dev/null +++ b/dmp-frontend/src/app/entities/view2/field.ts @@ -0,0 +1,23 @@ + +import { Injectable } from '@angular/core'; +import { Rule } from '../common/rule'; + +@Injectable() +export class Field { + id: string; + group: string; + ordinal: number; + title: string; + titleLang: string; + description: string; + descriptionLang: string; + ext_description: string; + ext_descriptionLang: string; + visibilityStyle: string = 'any'; + visibilityRules: Rule[]; + + renderStyle: string; + cssClass: string; + + +} diff --git a/dmp-frontend/src/app/entities/view2/fieldGroup.ts b/dmp-frontend/src/app/entities/view2/fieldGroup.ts new file mode 100644 index 000000000..51d85f368 --- /dev/null +++ b/dmp-frontend/src/app/entities/view2/fieldGroup.ts @@ -0,0 +1,18 @@ +import { Injectable } from '@angular/core'; +import { Rule } from '../common/rule'; + +@Injectable() +export class FieldGroup{ + + id: string; + ordinal: number; + title: string; + titleLang: string; + description: string; + descriptionLang: string; + ext_description: string; + ext_descriptionLang: string; + visibilityStyle: string = 'any'; + visibilityRules: Rule[]; + +} diff --git a/dmp-frontend/src/app/entities/view2/view.ts b/dmp-frontend/src/app/entities/view2/view.ts new file mode 100644 index 000000000..bf56d31bd --- /dev/null +++ b/dmp-frontend/src/app/entities/view2/view.ts @@ -0,0 +1,10 @@ +import { Injectable } from '@angular/core'; +import { Field } from './field'; +import { FieldGroup } from './fieldGroup'; + +@Injectable() +export class View { + fieldGroups: FieldGroup[]; + fields : Field[]; + +} diff --git a/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.css b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.css new file mode 100644 index 000000000..e69de29bb diff --git a/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.html b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.html new file mode 100644 index 000000000..3ca348344 --- /dev/null +++ b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.html @@ -0,0 +1,9 @@ +
+ +
+ +
+ + +
+ \ No newline at end of file diff --git a/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.spec.ts b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.spec.ts new file mode 100644 index 000000000..25cf5070f --- /dev/null +++ b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.spec.ts @@ -0,0 +1,25 @@ +import { async, ComponentFixture, TestBed } from '@angular/core/testing'; + +import { DynamicFormGroupComponent } from './dynamic-form-group.component'; + +describe('DynamicFormGroupComponent', () => { + let component: DynamicFormGroupComponent; + let fixture: ComponentFixture; + + beforeEach(async(() => { + TestBed.configureTestingModule({ + declarations: [ DynamicFormGroupComponent ] + }) + .compileComponents(); + })); + + beforeEach(() => { + fixture = TestBed.createComponent(DynamicFormGroupComponent); + component = fixture.componentInstance; + fixture.detectChanges(); + }); + + it('should be created', () => { + expect(component).toBeTruthy(); + }); +}); diff --git a/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.ts b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.ts new file mode 100644 index 000000000..cb2737c43 --- /dev/null +++ b/dmp-frontend/src/app/form/dynamic-form-group/dynamic-form-group.component.ts @@ -0,0 +1,34 @@ +import { DataModel } from '../../entities/DataModel'; +import { GroupBase } from './group-base'; +import { Component,Input, OnInit } from '@angular/core'; +import { FormGroup, Validators } from '@angular/forms'; +import { NgForm } from '@angular/forms'; + + + +@Component({ + selector: 'df-group', + templateUrl: './dynamic-form-group.component.html', + styleUrls: ['./dynamic-form-group.component.css'] +}) +export class DynamicFormGroupComponent implements OnInit { + @Input() dataModel: DataModel; + @Input() group: GroupBase; + @Input() form: FormGroup; + + constructor() { + } + + + + + + ngOnInit() { + + + + + + } + +} diff --git a/dmp-frontend/src/app/form/dynamic-form-group/group-base.ts b/dmp-frontend/src/app/form/dynamic-form-group/group-base.ts new file mode 100644 index 000000000..9ec514c25 --- /dev/null +++ b/dmp-frontend/src/app/form/dynamic-form-group/group-base.ts @@ -0,0 +1,32 @@ +import { Rule } from '../../entities/common/rule'; +import { FieldBase } from '../fields/field-base'; +export class GroupBase{ + value: T; + key: string; + title: string; + rules: Rule[]; + groupFields: FieldBase[]; + visible: boolean; + order:number; + controlType:string; + + constructor(options: { + value?: T, + key?: string, + title?: string, + rules?: Rule[], + groupFields?: FieldBase[], + visible?: boolean, + order?: number, + controlType?: string + } = {}) { + this.value = options.value; + this.key = options.key || ''; + this.title = options.title || ''; + this.rules = options.rules; + this.groupFields = options.groupFields; + this.visible = options.visible; + this.order = options.order === undefined ? 1 : options.order; + this.controlType = options.controlType || ''; + } +} diff --git a/dmp-frontend/src/app/form/dynamic-form.component.html b/dmp-frontend/src/app/form/dynamic-form.component.html new file mode 100644 index 000000000..a7501d3ad --- /dev/null +++ b/dmp-frontend/src/app/form/dynamic-form.component.html @@ -0,0 +1,22 @@ +
+ +
+
+ +
+
+ +
+ +
+ +
+ +
+ +
+ Saved the following values
{{payLoad}} +
+ +
+

Form value: {{ form.value | json }}

diff --git a/dmp-frontend/src/app/form/dynamic-form.component.ts b/dmp-frontend/src/app/form/dynamic-form.component.ts new file mode 100644 index 000000000..b81377c20 --- /dev/null +++ b/dmp-frontend/src/app/form/dynamic-form.component.ts @@ -0,0 +1,150 @@ +import { Component, Input, OnInit, AfterViewChecked, ViewChild } from '@angular/core'; +import { FormGroup, Validators } from '@angular/forms'; +import { NgForm } from '@angular/forms'; + +//import { FieldBase } from '../../app/form/fields/field-base'; +import { FieldControlService } from '../../app/services/field-control.service'; +import { ServerService } from '../../app/services/server.service'; +import { FieldVisibility } from '../../app/services/fieldVisibility.service'; +import { dataModelBuilder } from '../../app/services/dataModelBuilder.service'; +import { DataModel } from '../entities/DataModel'; +import { GroupBase } from './dynamic-form-group/group-base'; + +@Component({ + selector: 'dynamic-form', + templateUrl: './dynamic-form.component.html', + providers: [FieldControlService, ServerService, FieldVisibility, dataModelBuilder] +}) +export class DynamicFormComponent implements OnInit { + + @Input() dataModel: DataModel = new DataModel(); + form: FormGroup; + + payLoad = ''; + + + + + constructor(private qcs: FieldControlService, private serverService: ServerService, private fieldVisibility: FieldVisibility, private dataModelService: dataModelBuilder) { + this.form = this.qcs.toFormGroup(new Array()); + + } + + + getSubForm(subformName){ + return this.form.controls[subformName]; + } + + + ngOnInit() { + /* + //this.form = this.qcs.toFormGroup(this.fields); + this.serverService.getHTTPFields() + .subscribe( + (data: any[]) => { + this.fields = this.fieldVisibility.getFieldVisibility(data); + this.form = this.qcs.toFormGroup(this.fields); + console.log(this.fields); + }, + (error) => console.log(error) + ); + //this.buildForm(); + */ + + console.log("DynamicFormComponent.ngOnInit() -- RUNNIGN"); + + + this.serverService.getData() + .subscribe( + (data: any[]) => { + + console.log("this.serverService.getFields"); + + this.dataModel = new DataModel(); + this.dataModel = this.dataModelService.getDataModel(data); + + this.form = this.qcs.toFormGroupAlt(this.dataModel.fields, this.dataModel.groups); + //this.form = this.qcs.toFormGroup(this.fields); + + console.log("SUMMARY: ======>"); + console.log(this.dataModel); + console.log(this.form); + + }, + (error) => console.log(error) + ); + /* + + this.serverService.getFields() + .subscribe( + (data: any[]) => { + + console.log("this.serverService.getFields"); + + this.dataModel = new DataModel(); + this.dataModel = this.fieldVisibility.getDataModel(data); + + this.form = this.qcs.toFormGroupAlt(this.dataModel.fields, this.dataModel.groups); + //this.form = this.qcs.toFormGroup(this.fields); + + console.log("SUMMARY: ======>"); + console.log(this.dataModel); + console.log(this.form); + + }, + (error) => console.log(error) + ); + + */ + + } + + onSubmit() { + this.payLoad = JSON.stringify(this.form.value); + } + + buildForm(): void { + //this.form = this.qcs.toFormGroup(this.fields. + + + this.form.valueChanges + .subscribe(data => this.onValueChanged(data)); + + this.onValueChanged(); // (re)set validation messages now + } + + onValueChanged(data?: any) { + if (!this.form) { return; } + const form = this.form; + + for (const field in this.formErrors) { + // clear previous error message (if any) + this.formErrors[field] = ''; + const control = form.get(field); + + if (control && control.dirty && !control.valid) { + const messages = this.validationMessages[field]; + for (const key in control.errors) { + this.formErrors[field] += messages[key] + ' '; + } + } + } + } + + formErrors = { + 'name': '', + 'power': '' + }; + + validationMessages = { + 'name': { + 'required': 'Name is required.', + 'minlength': 'Name must be at least 4 characters long.', + 'maxlength': 'Name cannot be more than 24 characters long.', + 'forbiddenName': 'Someone named "Bob" cannot be a hero.' + }, + 'power': { + 'required': 'Power is required.' + } + }; +} \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.css b/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.css new file mode 100644 index 000000000..bf67b66d0 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.css @@ -0,0 +1 @@ +@CHARSET "UTF-8"; \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.html b/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.html new file mode 100644 index 000000000..e1c70d593 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.html @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.ts b/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.ts new file mode 100644 index 000000000..37dae71a8 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/checkbox/field-checkbox.ts @@ -0,0 +1,11 @@ +import {FieldBase} from '../field-base'; + +export class CheckBoxField extends FieldBase{ + controlType = 'checkbox'; + type: "checkbox"; + + constructor(options: {} = {}){ + super(options); + this.type = options['type'] || []; + } +} \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.css b/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.css new file mode 100644 index 000000000..bf67b66d0 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.css @@ -0,0 +1 @@ +@CHARSET "UTF-8"; \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.html b/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.html new file mode 100644 index 000000000..8954454ab --- /dev/null +++ b/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.html @@ -0,0 +1,3 @@ + \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.ts b/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.ts new file mode 100644 index 000000000..0da8d0f49 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/dropdown/field-dropdown.ts @@ -0,0 +1,11 @@ +import {FieldBase} from '../field-base'; + +export class DropdownField extends FieldBase{ + controlType = 'dropdown'; + options: {key: string, value: string}[] =[]; + + constructor(options: {} = {}){ + super(options); + this.options = options['options'] || []; + } +} \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/dynamic-form-field.component.html b/dmp-frontend/src/app/form/fields/dynamic-form-field.component.html new file mode 100644 index 000000000..915195334 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/dynamic-form-field.component.html @@ -0,0 +1,73 @@ + + + + + +
+
+
+
+
+ +
+
+
+
+ + + + + + + + + + + + + + + +
\ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/dynamic-form-field.component.ts b/dmp-frontend/src/app/form/fields/dynamic-form-field.component.ts new file mode 100644 index 000000000..5a0c71149 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/dynamic-form-field.component.ts @@ -0,0 +1,32 @@ +import { DataModel } from '../../entities/DataModel'; +import { Component, Input } from '@angular/core'; +import { FormGroup } from '@angular/forms'; + +import { FieldBase } from './field-base'; + +@Component({ + selector: 'df-field', + templateUrl: './dynamic-form-field.component.html' +}) + +export class DynamicFormFieldComponent { + @Input() dataModel: DataModel; + @Input() field: FieldBase; + @Input() form: FormGroup; + + get isValid() { + return true; //return this.form.controls[this.field.key].valid; + } + + + + ruleVisibleMethod(field, rule, dataModel){ //visibility rule -- checks if target field is visible + dataModel.fields.forEach(fld => { + if (fld.label == rule._target && fld.visible == true) + field.visible = true; + + }); + if(field.visible == true) + return true; + } +} \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/field-base.ts b/dmp-frontend/src/app/form/fields/field-base.ts new file mode 100644 index 000000000..2d6012b50 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/field-base.ts @@ -0,0 +1,34 @@ +import { Rule } from '../../entities/common/rule'; +export class FieldBase{ + value: T; + key: string; + label: string; + required:boolean; + order:number; + rules: Rule[]; + visible: boolean; + controlType:string; + group:string; + + constructor(options: { + value?: T, + key?: string, + label?: string, + required?:boolean, + order?: number, + rules?: Rule[], + visible?: boolean, + controlType?: string + group?: string + } = {}) { + this.value = options.value; + this.key = options.key || ''; + this.label = options.label || ''; + this.required = !! options.required; + this.order = options.order === undefined ? 1 : options.order; + this.rules = options.rules; + this.visible = options.visible; + this.controlType = options.controlType || ''; + this.group = options.group || ''; + } +} \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/textbox/field-textbox.css b/dmp-frontend/src/app/form/fields/textbox/field-textbox.css new file mode 100644 index 000000000..bf67b66d0 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/textbox/field-textbox.css @@ -0,0 +1 @@ +@CHARSET "UTF-8"; \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/textbox/field-textbox.html b/dmp-frontend/src/app/form/fields/textbox/field-textbox.html new file mode 100644 index 000000000..c11f1aa1d --- /dev/null +++ b/dmp-frontend/src/app/form/fields/textbox/field-textbox.html @@ -0,0 +1 @@ + \ No newline at end of file diff --git a/dmp-frontend/src/app/form/fields/textbox/field-textbox.ts b/dmp-frontend/src/app/form/fields/textbox/field-textbox.ts new file mode 100644 index 000000000..6e5ebe6f0 --- /dev/null +++ b/dmp-frontend/src/app/form/fields/textbox/field-textbox.ts @@ -0,0 +1,11 @@ +import {FieldBase} from '../field-base'; + +export class TextboxField extends FieldBase { + controlType = 'textbox'; + type: string; + + constructor (options: {} = {}) { + super(options); + this.type = options['type'] || ''; + } +} \ No newline at end of file diff --git a/dmp-frontend/src/app/services/dataModelBuilder.service.ts b/dmp-frontend/src/app/services/dataModelBuilder.service.ts new file mode 100644 index 000000000..ed86dfffc --- /dev/null +++ b/dmp-frontend/src/app/services/dataModelBuilder.service.ts @@ -0,0 +1,162 @@ +import { Injectable } from '@angular/core'; +import { DropdownField } from '../../app/form/fields/dropdown/field-dropdown'; +import { FieldBase } from '../../app/form/fields/field-base'; +import { TextboxField } from '../../app/form/fields/textbox/field-textbox'; +import { CheckBoxField } from '../../app/form/fields/checkbox/field-checkbox'; +import { DataModel } from '../entities/DataModel'; +import {Rule} from '../entities/common/rule'; +import { GroupBase } from '../form/dynamic-form-group/group-base'; + +@Injectable() +export class dataModelBuilder { + + private dataModel : DataModel; + + public getDataModel(data){ + + if(this.dataModel != null) + return this.dataModel; + + this.dataModel = new DataModel(); + this.dataModel.fields = this.getFieldVisibility(data.dataset.profile.viewstyle.definition.root.fields.field); + this.dataModel.groups = + //this.getGroups(data.dataset.profile.viewstyle.definition.root.fieldGroups.fieldGroup, this.dataModel.fields); + this.getDummyGroups(); + + return this.dataModel; + } + + + private getFieldVisibility(fields:any[]) { + console.log(fields); + let fieldsVisible :FieldBase[] =[]; + fields.forEach(element => { + if (element.viewStyle._renderstyle == "freetext"){ + let newfield:FieldBase ; + let rule = new Rule(); + //rule.target = element.visible.rule._target; + //rule.ruleType = element.visible.rule._type; + newfield = new TextboxField({ + label: element._attribute, + key:element.title._id, + value: 'DMP1', + required: true, + ordinal:element._ordinal, + rules: new Array(), + visible: true, + group : element._group + }); + if (element.visible.rule) + if(element.visible.rule.length){ + element.visible.rule.forEach(rule => { + newfield.rules.push(rule) + }); + } + else { + newfield.rules.push(element.visible.rule) + } + + fieldsVisible.push(newfield); + } + else if (element.viewStyle._renderstyle == "combobox"){ + let newfield:DropdownField; + let rule = new Rule(); + //rule.target = element.visible.rule._target; + //rule.ruleType = element.visible.rule._type; + newfield = new DropdownField({ + label: element._attribute, + key:element.title._id, + value: 'DMP1', + required: true, + ordinal:element._ordinal, + rule: element.visible.rule, + visible: true + }); + fieldsVisible.push(newfield); + } + else if (element.viewStyle._renderstyle == "checkbox"){ + let newfield:CheckBoxField; + //rule.target = element.visible.rule._target; + //rule.ruleType = element.visible.rule._type; + newfield = new CheckBoxField({ + label: element._attribute, + key:element._id, + value: true, + required: true, + ordinal:element._ordinal, + rule: element.visible.rule, + visible: true + }); + fieldsVisible.push(newfield); + } + }); + fieldsVisible.sort((a, b) => a.order - b.order); + return fieldsVisible; + } + + private getGroups(fieldGroups:any[], fields:any[]){ + let groups :GroupBase[] =[]; + + fieldGroups.forEach(fieldGroup =>{ + let newfldGroup = new GroupBase(); + newfldGroup.groupFields = new Array(); + fields.forEach(field => { + if(fieldGroup._id == field.group){ + newfldGroup.groupFields.push(field); + } + }); + newfldGroup.title = fieldGroup.title.__cdata; + groups.push(newfldGroup) + }); + return groups; + } + + + private getDummyGroups(){ + + let groups :GroupBase[] =[]; + + + let group: GroupBase; + group = new GroupBase({ + key: "adfgadfsg", + title: "GroupA", + rules: new Array(), + groupFields: new Array(), + value: "value", + visible: true, + order: 1 + //, + //controlType: "none" + }); + + + let newfield1:FieldBase ; + newfield1 = new TextboxField({ + key:"tf1-455", + label: "Field from group1", + value: 'this is a groupfield', + required: true, + ordinal:1 + }); + group.groupFields.push(newfield1); + + let newfield2:FieldBase ; + newfield2 = new TextboxField({ + key:"tf1-443", + label: "Another field from group1", + value: 'this is a groupfield', + required: true, + ordinal:2 + }); + group.groupFields.push(newfield2); + + groups.push(group); + + + return groups; + + } + + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/services/field-control.service.ts b/dmp-frontend/src/app/services/field-control.service.ts new file mode 100644 index 000000000..c3e37aa1c --- /dev/null +++ b/dmp-frontend/src/app/services/field-control.service.ts @@ -0,0 +1,47 @@ +import { Injectable } from '@angular/core'; +import { FormControl, FormGroup, Validators } from '@angular/forms'; + +import { FieldBase } from '../../app/form/fields/field-base'; +import { GroupBase } from '../form/dynamic-form-group/group-base'; + +@Injectable() +export class FieldControlService { + constructor(){ } + + toFormGroup(fields: FieldBase[]){ + let group: any ={}; + fields.forEach(field => { + group[field.key] = field.required ? new FormControl(field.value || '', Validators.required) + : new FormControl(field.value || '') + }); + + return new FormGroup(group); + } + + + toFormGroupAlt(fields: FieldBase[], groups: GroupBase[]){ + + let form: any = {}; + + groups.forEach(group => { + let subgroup: any = {}; + group.groupFields.forEach(field => { + subgroup[field.key] = field.required ? new FormControl(field.value || '', Validators.required) : new FormControl(field.value || '') + }); + //PLEASE CHANGE THE group.key TO BE SAME AS THE ONE ON THE DYNAMIC-FORM-GROUP-COMPONENT.html + form[group.key] = new FormGroup(subgroup); + console.log("FORM_GROUP_GROUP: "); + console.log(form); + }); + //add also the spare fields into the form + fields.forEach(field => { + form[field.key] = field.required ? new FormControl(field.value || '', Validators.required) : new FormControl(field.value || '') + }); + + console.log("FORM_GROUP: "); + console.log(form); + return new FormGroup(form); + } + + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/services/fieldVisibility.service.ts b/dmp-frontend/src/app/services/fieldVisibility.service.ts new file mode 100644 index 000000000..6d4cd2c45 --- /dev/null +++ b/dmp-frontend/src/app/services/fieldVisibility.service.ts @@ -0,0 +1,127 @@ +import { Injectable } from '@angular/core'; +import { DropdownField } from '../../app/form/fields/dropdown/field-dropdown'; +import { FieldBase } from '../../app/form/fields/field-base'; +import { TextboxField } from '../../app/form/fields/textbox/field-textbox'; +import { CheckBoxField } from '../../app/form/fields/checkbox/field-checkbox'; +import { DataModel } from '../entities/DataModel'; +import {Rule} from '../entities/common/rule'; +import { GroupBase } from '../form/dynamic-form-group/group-base'; + +@Injectable() +export class FieldVisibility { + + private dataModel : DataModel; + + public getDataModel(fields:any[]){ + + if(this.dataModel != null) + return this.dataModel; + + this.dataModel = new DataModel(); + this.dataModel.fields = this.getFieldVisibility(fields); + this.dataModel.groups = this.getGroups(); + + return this.dataModel; + } + + + private getFieldVisibility(fields:any[]) { + console.log(fields); + let fieldsVisible :FieldBase[] =[]; + fields.forEach(element => { + if (element.viewStyle._renderstyle == "freetext"){ + let newfield:FieldBase ; + let rule = new Rule(); + //rule.target = element.visible.rule._target; + //rule.ruleType = element.visible.rule._type; + newfield = new TextboxField({ + label: element._id, + key:element.title.__cdata, + value: 'DMP1', + required: true, + ordinal:element._ordinal, + rules: new Array(), + visible: true, + group : element._group + }); + if (element.visible.rule) + if(element.visible.rule.length){ + element.visible.rule.forEach(rule => { + newfield.rules.push(rule) + }); + } + else { + newfield.rules.push(element.visible.rule) + } + + fieldsVisible.push(newfield); + } + if (element.viewStyle._renderstyle == "combobox"){ + let newfield:DropdownField; + let rule = new Rule(); + //rule.target = element.visible.rule._target; + //rule.ruleType = element.visible.rule._type; + newfield = new DropdownField({ + label: element._id, + key:element.title.__cdata, + value: 'DMP1', + required: true, + ordinal:element._ordinal, + rule: element.visible.rule, + visible: true + }); + fieldsVisible.push(newfield); + } + }); + fieldsVisible.sort((a, b) => a.order - b.order); + return fieldsVisible; + } + + private getGroups(){ + + let groups :GroupBase[] =[]; + + + let group: GroupBase; + group = new GroupBase({ + key: "adfgadfsg", + title: "GroupA", + rules: new Array(), + groupFields: new Array(), + //value = "value", + visible: true, + order: 1 + //, + //controlType: "none" + }); + + + let newfield1:FieldBase ; + newfield1 = new TextboxField({ + key:"tf1-455", + label: "Field from group1", + value: 'this is a groupfield', + required: true, + ordinal:1 + }); + group.groupFields.push(newfield1); + + let newfield2:FieldBase ; + newfield2 = new TextboxField({ + key:"tf1-443", + label: "Another field from group1", + value: 'this is a groupfield', + required: true, + ordinal:2 + }); + group.groupFields.push(newfield2); + + groups.push(group); + + + return groups; + + } + + +} \ No newline at end of file diff --git a/dmp-frontend/src/app/services/server.service.ts b/dmp-frontend/src/app/services/server.service.ts new file mode 100644 index 000000000..2ff4c5f49 --- /dev/null +++ b/dmp-frontend/src/app/services/server.service.ts @@ -0,0 +1,91 @@ +import {Injectable, ReflectiveInjector, Injector} from '@angular/core'; +import {Headers, Http, Response} from '@angular/http'; +import 'rxjs/Rx'; +import {FieldBase} from '../../app/form/fields/field-base'; +import {JsonObjest} from '../../app/entities/JsonObject.class'; +import {FieldVisibility} from '../../app/services/fieldVisibility.service'; +import {dataModelBuilder} from '../../app/services/dataModelBuilder.service'; +import { DatasetProfile } from '../entities/datasetprofile'; +import {DataModel} from '../entities/DataModel' + + +import './../../assets/xml2json.min.js'; + +declare var X2JS: any; + +@Injectable() +export class ServerService { + + xml2jsonOBJ: any; + //fetchURL: string = 'http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/a868dbbb-ee37-4ce6-81c8-27048e0599a9'; + fetchURL: string = 'http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/a71a6a92-5c23-40d7-ab87-e30bc860f5a4';//include rules! + //fetchURL: string = 'http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/6c845c42-dc09-42ed-9959-cceb3b616364'; + +/* + //fetchURL: string = 'http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/a868dbbb-ee37-4ce6-81c8-27048e0599a9'; + fetchURL: string = 'http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/a71a6a92-5c23-40d7-ab87-e30bc860f5a4'; + //fetchURL: string = 'http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/6c845c42-dc09-42ed-9959-cceb3b616364'; +*/ + + data: any; + + constructor(private http: Http) { + this.xml2jsonOBJ = new X2JS(); + } + + + getData() { + + if(this.data != null) + return this.data; //use the already loaded one + + + return this.http.get(this.fetchURL) + .map( + (response: Response) => { + const data = response.json(); + + //replace the xmls {model,view,rule} definitions with json -- https://github.com/abdmob/x2js library + data.dataset.profile.definition = this.xml2jsonOBJ.xml_str2json(data.dataset.profile.definition); + data.dataset.profile.ruleset.definition = this.xml2jsonOBJ.xml_str2json(data.dataset.profile.ruleset.definition); + data.dataset.profile.viewstyle.definition = this.xml2jsonOBJ.xml_str2json(data.dataset.profile.viewstyle.definition); + //can be converted back to xml (which shouldn't be needed) with this.xml2jsonOBJ.json2xml_str + + this.data = data; //cache it for subsequent calls + + return data; + } + ); + + + } + + + + getFields() { + + + //return this.http.get('http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/6c845c42-dc09-42ed-9959-cceb3b616364') + return this.http.get('http://dl010.madgik.di.uoa.gr:8080/dmp-backend/rest/DMP/a868dbbb-ee37-4ce6-81c8-27048e0599a9') + .map( + (response: Response) => { + const data = response.json(); + let obj: JsonObjest = new JsonObjest(); + + //let test = new FieldBase(data); + + //replace the xmls {model,view,rule} definitions with json -- https://github.com/abdmob/x2js library + data.dataset.profile.definition = this.xml2jsonOBJ.xml_str2json(data.dataset.profile.definition); + data.dataset.profile.ruleset.definition = this.xml2jsonOBJ.xml_str2json(data.dataset.profile.ruleset.definition); + data.dataset.profile.viewstyle.definition = this.xml2jsonOBJ.xml_str2json(data.dataset.profile.viewstyle.definition); + //can be converted back to xml (which shouldn't be needed) with this.xml2jsonOBJ.json2xml_str + obj.fields = data.dataset.profile.viewstyle.definition.root.fields.field; + + console.log("obj.fields"); + console.log(obj.fields); + + return obj.fields; //return data; + } + ); + } +} \ No newline at end of file diff --git a/dmp-frontend/src/assets/.gitkeep b/dmp-frontend/src/assets/.gitkeep new file mode 100644 index 000000000..e69de29bb diff --git a/dmp-frontend/src/assets/xml2json.min.js b/dmp-frontend/src/assets/xml2json.min.js new file mode 100644 index 000000000..e8f9d0aee --- /dev/null +++ b/dmp-frontend/src/assets/xml2json.min.js @@ -0,0 +1 @@ +(function(a,b){if(typeof define==="function"&&define.amd){define([],b);}else{if(typeof 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environment = { + production: true +}; diff --git a/dmp-frontend/src/environments/environment.ts b/dmp-frontend/src/environments/environment.ts new file mode 100644 index 000000000..b7f639aec --- /dev/null +++ b/dmp-frontend/src/environments/environment.ts @@ -0,0 +1,8 @@ +// The file contents for the current environment will overwrite these during build. +// The build system defaults to the dev environment which uses `environment.ts`, but if you do +// `ng build --env=prod` then `environment.prod.ts` will be used instead. +// The list of which env maps to which file can be found in `.angular-cli.json`. + +export const environment = { + production: false +}; diff --git a/dmp-frontend/src/favicon.ico b/dmp-frontend/src/favicon.ico new file mode 100644 index 000000000..8081c7cea Binary files /dev/null and b/dmp-frontend/src/favicon.ico differ diff --git a/dmp-frontend/src/index.html b/dmp-frontend/src/index.html new file mode 100644 index 000000000..738a5de3d --- /dev/null +++ b/dmp-frontend/src/index.html @@ -0,0 +1,27 @@ + + + + + Digital Management Plans - Manager + + + + + + + + + + + +
+
+

Digital Management Plans Editor

+
+
+ +
+
+ + + diff --git a/dmp-frontend/src/main.ts b/dmp-frontend/src/main.ts new file mode 100644 index 000000000..a9ca1caf8 --- /dev/null +++ b/dmp-frontend/src/main.ts @@ -0,0 +1,11 @@ +import { enableProdMode } from '@angular/core'; +import { platformBrowserDynamic } from '@angular/platform-browser-dynamic'; + +import { AppModule } from './app/app.module'; +import { environment } from './environments/environment'; + +if (environment.production) { + enableProdMode(); +} + +platformBrowserDynamic().bootstrapModule(AppModule); diff --git a/dmp-frontend/src/polyfills.ts b/dmp-frontend/src/polyfills.ts new file mode 100644 index 000000000..7831e97b7 --- /dev/null +++ b/dmp-frontend/src/polyfills.ts @@ -0,0 +1,72 @@ +/** + * This file includes polyfills needed by Angular and is loaded before the app. + * You can add your own extra polyfills to this file. + * + * This file is divided into 2 sections: + * 1. Browser polyfills. These are applied before loading ZoneJS and are sorted by browsers. + * 2. Application imports. Files imported after ZoneJS that should be loaded before your main + * file. + * + * The current setup is for so-called "evergreen" browsers; the last versions of browsers that + * automatically update themselves. This includes Safari >= 10, Chrome >= 55 (including Opera), + * Edge >= 13 on the desktop, and iOS 10 and Chrome on mobile. + * + * Learn more in https://angular.io/docs/ts/latest/guide/browser-support.html + */ + +/*************************************************************************************************** + * BROWSER POLYFILLS + */ + +/** IE9, IE10 and IE11 requires all of the following polyfills. **/ +// import 'core-js/es6/symbol'; +// import 'core-js/es6/object'; +// import 'core-js/es6/function'; +// import 'core-js/es6/parse-int'; +// import 'core-js/es6/parse-float'; +// import 'core-js/es6/number'; +// import 'core-js/es6/math'; +// import 'core-js/es6/string'; +// import 'core-js/es6/date'; +// import 'core-js/es6/array'; +// import 'core-js/es6/regexp'; +// import 'core-js/es6/map'; +// import 'core-js/es6/weak-map'; +// import 'core-js/es6/set'; + +/** IE10 and IE11 requires the following for NgClass support on SVG elements */ +// import 'classlist.js'; // Run `npm install --save classlist.js`. + +/** Evergreen browsers require these. **/ +import 'core-js/es6/reflect'; +import 'core-js/es7/reflect'; + + +/** + * Required to support Web Animations `@angular/animation`. + * Needed for: All but Chrome, Firefox and Opera. http://caniuse.com/#feat=web-animation + **/ +// import 'web-animations-js'; // Run `npm install --save web-animations-js`. + + + +/*************************************************************************************************** + * Zone JS is required by Angular itself. + */ +import 'zone.js/dist/zone'; // Included with Angular CLI. + + + +/*************************************************************************************************** + * APPLICATION IMPORTS + */ + +/** + * Date, currency, decimal and percent pipes. + * Needed for: All but Chrome, Firefox, Edge, IE11 and Safari 10 + */ +// import 'intl'; // Run `npm install --save intl`. +/** + * Need to import at least one locale-data with intl. + */ +// import 'intl/locale-data/jsonp/en'; diff --git a/dmp-frontend/src/styles.css b/dmp-frontend/src/styles.css new file mode 100644 index 000000000..90d4ee007 --- /dev/null +++ b/dmp-frontend/src/styles.css @@ -0,0 +1 @@ +/* You can add global styles to this file, and also import other style files */ diff --git a/dmp-frontend/src/test.ts b/dmp-frontend/src/test.ts new file mode 100644 index 000000000..cd612eeb0 --- /dev/null +++ b/dmp-frontend/src/test.ts @@ -0,0 +1,32 @@ +// This file is required by karma.conf.js and loads recursively all the .spec and framework files + +import 'zone.js/dist/long-stack-trace-zone'; +import 'zone.js/dist/proxy.js'; +import 'zone.js/dist/sync-test'; +import 'zone.js/dist/jasmine-patch'; +import 'zone.js/dist/async-test'; +import 'zone.js/dist/fake-async-test'; +import { getTestBed } from '@angular/core/testing'; +import { + BrowserDynamicTestingModule, + platformBrowserDynamicTesting +} from '@angular/platform-browser-dynamic/testing'; + +// Unfortunately there's no typing for the `__karma__` variable. Just declare it as any. +declare const __karma__: any; +declare const require: any; + +// Prevent Karma from running prematurely. +__karma__.loaded = function () {}; + +// First, initialize the Angular testing environment. +getTestBed().initTestEnvironment( + BrowserDynamicTestingModule, + platformBrowserDynamicTesting() +); +// Then we find all the tests. +const context = require.context('./', true, /\.spec\.ts$/); +// And load the modules. +context.keys().map(context); +// Finally, start Karma to run the tests. +__karma__.start(); diff --git a/dmp-frontend/src/tsconfig.app.json b/dmp-frontend/src/tsconfig.app.json new file mode 100644 index 000000000..39ba8dbac --- /dev/null +++ b/dmp-frontend/src/tsconfig.app.json @@ -0,0 +1,13 @@ +{ + "extends": "../tsconfig.json", + "compilerOptions": { + "outDir": "../out-tsc/app", + "baseUrl": "./", + "module": "es2015", + "types": [] + }, + "exclude": [ + "test.ts", + "**/*.spec.ts" + ] +} diff --git a/dmp-frontend/src/tsconfig.spec.json b/dmp-frontend/src/tsconfig.spec.json new file mode 100644 index 000000000..63d89ff28 --- /dev/null +++ b/dmp-frontend/src/tsconfig.spec.json @@ -0,0 +1,20 @@ +{ + "extends": "../tsconfig.json", + "compilerOptions": { + "outDir": "../out-tsc/spec", + "baseUrl": "./", + "module": "commonjs", + "target": "es5", + "types": [ + "jasmine", + "node" + ] + }, + "files": [ + "test.ts" + ], + "include": [ + "**/*.spec.ts", + "**/*.d.ts" + ] +} diff --git a/dmp-frontend/src/typings.d.ts b/dmp-frontend/src/typings.d.ts new file mode 100644 index 000000000..ef5c7bd62 --- /dev/null +++ b/dmp-frontend/src/typings.d.ts @@ -0,0 +1,5 @@ +/* SystemJS module definition */ +declare var module: NodeModule; +interface NodeModule { + id: string; +} diff --git a/dmp-frontend/tsconfig.json b/dmp-frontend/tsconfig.json new file mode 100644 index 000000000..00e5a0434 --- /dev/null +++ b/dmp-frontend/tsconfig.json @@ -0,0 +1,20 @@ +{ + "compileOnSave": false, + "compilerOptions": { + "allowJs": true, + "outDir": "./dist/out-tsc", + "sourceMap": true, + "declaration": false, + "moduleResolution": "node", + "emitDecoratorMetadata": true, + "experimentalDecorators": true, + "target": "es5", + "typeRoots": [ + "node_modules/@types" + ], + "lib": [ + "es2017", + "dom" + ] + } +} diff --git a/dmp-frontend/tslint.json b/dmp-frontend/tslint.json new file mode 100644 index 000000000..0db5751c7 --- /dev/null +++ b/dmp-frontend/tslint.json @@ -0,0 +1,142 @@ +{ + "rulesDirectory": [ + "node_modules/codelyzer" + ], + "rules": { + "arrow-return-shorthand": true, + "callable-types": true, + "class-name": true, + "comment-format": [ + true, + "check-space" + ], + "curly": true, + "eofline": true, + "forin": true, + "import-blacklist": [ + true, + "rxjs" + ], + "import-spacing": true, + "indent": [ + true, + "spaces" + ], + "interface-over-type-literal": true, + "label-position": true, + "max-line-length": [ + true, + 140 + ], + "member-access": false, + "member-ordering": [ + true, + { + "order": [ + "static-field", + "instance-field", + "static-method", + "instance-method" + ] + } + ], + "no-arg": true, + "no-bitwise": true, + "no-console": [ + true, + "debug", + "info", + "time", + "timeEnd", + "trace" + ], + "no-construct": true, + "no-debugger": true, + "no-duplicate-super": true, + "no-empty": false, + "no-empty-interface": true, + "no-eval": true, + "no-inferrable-types": [ + true, + "ignore-params" + ], + "no-misused-new": true, + "no-non-null-assertion": true, + "no-shadowed-variable": true, + "no-string-literal": false, + "no-string-throw": true, + "no-switch-case-fall-through": true, + "no-trailing-whitespace": true, + "no-unnecessary-initializer": true, + "no-unused-expression": true, + "no-use-before-declare": true, + "no-var-keyword": true, + "object-literal-sort-keys": false, + "one-line": [ + true, + "check-open-brace", + "check-catch", + "check-else", + "check-whitespace" + ], + "prefer-const": true, + "quotemark": [ + true, + "single" + ], + "radix": true, + "semicolon": [ + true, + "always" + ], + "triple-equals": [ + true, + "allow-null-check" + ], + "typedef-whitespace": [ + true, + { + "call-signature": "nospace", + "index-signature": "nospace", + "parameter": "nospace", + "property-declaration": "nospace", + "variable-declaration": "nospace" + } + ], + "typeof-compare": true, + "unified-signatures": true, + "variable-name": false, + "whitespace": [ + true, + "check-branch", + "check-decl", + "check-operator", + "check-separator", + "check-type" + ], + "directive-selector": [ + true, + "attribute", + "app", + "camelCase" + ], + "component-selector": [ + true, + "element", + "app", + "kebab-case" + ], + "use-input-property-decorator": true, + "use-output-property-decorator": true, + "use-host-property-decorator": true, + "no-input-rename": true, + "no-output-rename": true, + "use-life-cycle-interface": true, + "use-pipe-transform-interface": true, + "component-class-suffix": true, + "directive-class-suffix": true, + "no-access-missing-member": true, + "templates-use-public": true, + "invoke-injectable": true + } +} diff --git a/dmp-javascript-engine/.classpath b/dmp-javascript-engine/.classpath new file mode 100644 index 000000000..a47b97f01 --- /dev/null +++ b/dmp-javascript-engine/.classpath @@ -0,0 +1,16 @@ + + + + + + + + + + + + + + + + diff --git a/dmp-javascript-engine/.gitignore b/dmp-javascript-engine/.gitignore new file mode 100644 index 000000000..09e3bc9b2 --- /dev/null +++ b/dmp-javascript-engine/.gitignore @@ -0,0 +1,2 @@ +/bin/ +/target/ diff --git a/dmp-javascript-engine/.project b/dmp-javascript-engine/.project new file mode 100644 index 000000000..1901da381 --- /dev/null +++ b/dmp-javascript-engine/.project @@ -0,0 +1,23 @@ + + + dmp-javascript-engine + + + + + + org.eclipse.jdt.core.javabuilder + + + + + org.eclipse.m2e.core.maven2Builder + + + + + + org.eclipse.m2e.core.maven2Nature + org.eclipse.jdt.core.javanature + + diff --git a/dmp-javascript-engine/.settings/org.eclipse.jdt.core.prefs b/dmp-javascript-engine/.settings/org.eclipse.jdt.core.prefs new file mode 100644 index 000000000..672496e10 --- /dev/null +++ b/dmp-javascript-engine/.settings/org.eclipse.jdt.core.prefs @@ -0,0 +1,12 @@ +eclipse.preferences.version=1 +org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled +org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8 +org.eclipse.jdt.core.compiler.codegen.unusedLocal=preserve +org.eclipse.jdt.core.compiler.compliance=1.8 +org.eclipse.jdt.core.compiler.debug.lineNumber=generate +org.eclipse.jdt.core.compiler.debug.localVariable=generate +org.eclipse.jdt.core.compiler.debug.sourceFile=generate +org.eclipse.jdt.core.compiler.problem.assertIdentifier=error +org.eclipse.jdt.core.compiler.problem.enumIdentifier=error +org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning +org.eclipse.jdt.core.compiler.source=1.8 diff --git a/dmp-javascript-engine/.settings/org.eclipse.m2e.core.prefs b/dmp-javascript-engine/.settings/org.eclipse.m2e.core.prefs new file mode 100644 index 000000000..f897a7f1c --- /dev/null +++ b/dmp-javascript-engine/.settings/org.eclipse.m2e.core.prefs @@ -0,0 +1,4 @@ +activeProfiles= +eclipse.preferences.version=1 +resolveWorkspaceProjects=true +version=1 diff --git a/dmp-javascript-engine/pom.xml b/dmp-javascript-engine/pom.xml new file mode 100644 index 000000000..977b6a087 --- /dev/null +++ b/dmp-javascript-engine/pom.xml @@ -0,0 +1,33 @@ + + 4.0.0 + dmp-javascript-engine + dmp-javascript-engine + 0.0.1-SNAPSHOT + + + + maven-compiler-plugin + 3.6.1 + + 1.8 + 1.8 + + + + + + + + + junit + junit + 4.12 + test + + + + + + + \ No newline at end of file diff --git a/dmp-javascript-engine/src/main/java/dmp/javascript/JSEngine.java b/dmp-javascript-engine/src/main/java/dmp/javascript/JSEngine.java new file mode 100644 index 000000000..5d50e0ab5 --- /dev/null +++ b/dmp-javascript-engine/src/main/java/dmp/javascript/JSEngine.java @@ -0,0 +1,38 @@ +package dmp.javascript; + +import java.io.FileNotFoundException; +import java.io.FileReader; +import java.io.Reader; + +import javax.script.Invocable; +import javax.script.ScriptEngine; +import javax.script.ScriptEngineManager; +import javax.script.ScriptException; + +public class JSEngine { + + private ScriptEngine engine; + + + public JSEngine() { + try { + engine = new ScriptEngineManager().getEngineByName("nashorn"); + } + catch(Exception ex) { + engine = new ScriptEngineManager().getEngineByName("JavaScript"); + } + } + + public void addScript(String script) throws ScriptException { + engine.eval(script); + } + + public void addScript(Reader script) throws ScriptException, FileNotFoundException { + engine.eval(script); + } + + public Object executeFunction(String functionName, Object ... args ) throws NoSuchMethodException, ScriptException { + return ((Invocable) engine).invokeFunction(functionName, args); + } + +} diff --git a/dmp-javascript-engine/src/test/java/dmp/javascript/tests/TestEngine.java b/dmp-javascript-engine/src/test/java/dmp/javascript/tests/TestEngine.java new file mode 100644 index 000000000..aec3d3c88 --- /dev/null +++ b/dmp-javascript-engine/src/test/java/dmp/javascript/tests/TestEngine.java @@ -0,0 +1,95 @@ +package dmp.javascript.tests; + +import static org.junit.Assert.assertEquals; +import static org.junit.Assert.assertFalse; +import static org.junit.Assert.assertTrue; +import static org.junit.Assert.fail; + +import java.io.FileNotFoundException; +import java.io.FileReader; + +import org.junit.After; +import org.junit.Before; +import org.junit.BeforeClass; +import org.junit.Ignore; +import org.junit.Test; + +import dmp.javascript.JSEngine; + +public class TestEngine { + + + private static JSEngine jsEngine; + + @BeforeClass + public static void init() { + + } + + @Before + public void beforeEachTest() { + jsEngine = new JSEngine(); + } + + @After + public void afterEachTest() { + + } + + @Test + public void testFunction1() { + try { + jsEngine.addScript("function f(){return 1;}"); + Object obj = jsEngine.executeFunction("f"); + assertEquals(1, obj); + } + catch(Exception ex) { + fail("Should not have thrown an exception"); + } + } + + @Test + public void testFunction2() { + try { + jsEngine.addScript("function mergeStr(p1,p2){return p1+p2;}"); + Object obj = jsEngine.executeFunction("mergeStr", "aaa", "bbb"); + assertEquals("aaabbb", obj); + } + catch(Exception ex) { + fail("Should not have thrown an exception"); + } + } + + @Test + public void testFunction3() { + try { + jsEngine.addScript("var a = 5;"); + jsEngine.addScript("function f(){return a;}"); + Object obj = jsEngine.executeFunction("f"); + assertEquals(5, obj); + } + catch(Exception ex) { + ex.printStackTrace(); + fail("Should not have thrown an exception"); + } + } + + @Test + public void testSubFunction() { + try { + jsEngine.addScript("function subf(){return \"sub\";}"); + jsEngine.addScript("function f(p){return subf()+p;}"); + Object obj = jsEngine.executeFunction("f", "aaa"); + assertEquals("subaaa", obj); + } + catch(Exception ex) { + fail("Should not have thrown an exception"); + } + } + + @Test(expected = FileNotFoundException.class) + public void testReaderException() throws Exception { + jsEngine.addScript(new FileReader("/sdghsfh/sdgafg/f.f")); + } + +}