MaDgIK
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uoa-repository-manager-service
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develop #1

Merged
antonis.lempesis merged 36 commits from develop into master 2023-01-19 12:41:45 +01:00
Conversation 0 Commits 36 Files Changed 82 +34 -42
25 changed files with 34 additions and 42 deletions
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Showing only changes of commit db88b2eecb - Show all commits

1
src/main/java/eu/dnetlib/repo/manager/config/AaiSecurityConfiguration.java
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@ -15,7 +15,6 @@ import org.springframework.security.config.annotation.web.builders.HttpSecurity;
import org.springframework.security.config.annotation.web.builders.WebSecurity;
import org.springframework.security.config.annotation.web.configuration.EnableWebSecurity;
import org.springframework.security.config.annotation.web.configuration.WebSecurityConfigurerAdapter;
import org.springframework.security.web.authentication.LoginUrlAuthenticationEntryPoint;
import org.springframework.security.web.authentication.preauth.AbstractPreAuthenticatedProcessingFilter;
import java.util.*;

2
src/main/java/eu/dnetlib/repo/manager/controllers/BrokerController.java
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@ -1,8 +1,8 @@
package eu.dnetlib.repo.manager.controllers;
import eu.dnetlib.repo.manager.exception.BrokerException;
import eu.dnetlib.repo.manager.domain.Term;
import eu.dnetlib.repo.manager.domain.broker.*;
import eu.dnetlib.repo.manager.exception.BrokerException;
import eu.dnetlib.repo.manager.service.BrokerServiceImpl;
import io.swagger.annotations.Api;
import io.swagger.annotations.ApiParam;

5
src/main/java/eu/dnetlib/repo/manager/controllers/DashboardController.java
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@ -1,7 +1,10 @@
package eu.dnetlib.repo.manager.controllers;
import eu.dnetlib.enabling.datasources.common.AggregationInfo;
import eu.dnetlib.repo.manager.domain.*;
import eu.dnetlib.repo.manager.domain.BrokerSummary;
import eu.dnetlib.repo.manager.domain.CollectionMonitorSummary;
import eu.dnetlib.repo.manager.domain.RepositorySummaryInfo;
import eu.dnetlib.repo.manager.domain.UsageSummary;
import eu.dnetlib.repo.manager.exception.BrokerException;
import eu.dnetlib.repo.manager.exception.RepositoryServiceException;
import eu.dnetlib.repo.manager.service.BrokerService;

2
src/main/java/eu/dnetlib/repo/manager/controllers/RepositoryController.java
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@ -1,8 +1,6 @@
package eu.dnetlib.repo.manager.controllers;
import eu.dnetlib.enabling.datasources.common.AggregationInfo;
import eu.dnetlib.repo.manager.domain.Repository;
import eu.dnetlib.repo.manager.domain.RepositoryInterface;
import eu.dnetlib.repo.manager.domain.*;
import eu.dnetlib.repo.manager.domain.dto.RepositoryTerms;
import eu.dnetlib.repo.manager.domain.dto.User;

1
src/main/java/eu/dnetlib/repo/manager/controllers/UserRoleController.java
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@ -6,7 +6,6 @@ import eu.dnetlib.repo.manager.service.security.AuthoritiesUpdater;
import eu.dnetlib.repo.manager.service.security.AuthorizationService;
import eu.dnetlib.repo.manager.service.security.RoleMappingService;
import eu.dnetlib.repo.manager.utils.JsonUtils;
import io.swagger.annotations.Api;
import io.swagger.annotations.ApiOperation;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.http.HttpStatus;

2
src/main/java/eu/dnetlib/repo/manager/controllers/ValidatorController.java
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@ -5,8 +5,8 @@ import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.domain.functionality.validator.RuleSet;
import eu.dnetlib.domain.functionality.validator.StoredJob;
import eu.dnetlib.repo.manager.domain.InterfaceInformation;
import eu.dnetlib.repo.manager.exception.ValidationServiceException;
import eu.dnetlib.repo.manager.exception.ResourceNotFoundException;
import eu.dnetlib.repo.manager.exception.ValidationServiceException;
import eu.dnetlib.repo.manager.service.EmailUtils;
import eu.dnetlib.repo.manager.service.ValidatorServiceImpl;
import io.swagger.annotations.Api;

2
src/main/java/eu/dnetlib/repo/manager/domain/DatasourceDetails.java
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@ -1,8 +1,8 @@
package eu.dnetlib.repo.manager.domain;
import javax.persistence.Transient;
import java.util.Date;
import java.util.Set;
import javax.persistence.Transient;
public class DatasourceDetails {

2
src/main/java/eu/dnetlib/repo/manager/domain/DatasourcesCollection.java
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@ -1,7 +1,5 @@
package eu.dnetlib.repo.manager.domain;
import eu.dnetlib.repo.manager.domain.Repository;
import java.util.ArrayList;
import java.util.List;

3
src/main/java/eu/dnetlib/repo/manager/domain/Repository.java
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@ -3,7 +3,8 @@ package eu.dnetlib.repo.manager.domain;
import eu.dnetlib.domain.data.DataCollectionType;
import eu.dnetlib.domain.data.PiwikInfo;
import java.util.*;
import java.util.ArrayList;
import java.util.List;
/**
* The domain object for the Repository resource data structure

2
src/main/java/eu/dnetlib/repo/manager/service/BrokerService.java
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@ -1,8 +1,8 @@
package eu.dnetlib.repo.manager.service;
import eu.dnetlib.repo.manager.exception.BrokerException;
import eu.dnetlib.repo.manager.domain.Term;
import eu.dnetlib.repo.manager.domain.broker.*;
import eu.dnetlib.repo.manager.exception.BrokerException;
import org.json.JSONException;
import org.springframework.http.ResponseEntity;

2
src/main/java/eu/dnetlib/repo/manager/service/BrokerServiceImpl.java
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@ -2,11 +2,11 @@ package eu.dnetlib.repo.manager.service;
import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.ObjectMapper;
import eu.dnetlib.repo.manager.exception.BrokerException;
import eu.dnetlib.repo.manager.domain.RepositorySnippet;
import eu.dnetlib.repo.manager.domain.Term;
import eu.dnetlib.repo.manager.domain.Tuple;
import eu.dnetlib.repo.manager.domain.broker.*;
import eu.dnetlib.repo.manager.exception.BrokerException;
import org.apache.commons.lang.NotImplementedException;
import org.json.JSONException;
import org.springframework.beans.factory.annotation.Autowired;

4
src/main/java/eu/dnetlib/repo/manager/service/DashboardServiceImpl.java
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@ -1,7 +1,9 @@
package eu.dnetlib.repo.manager.service;
import eu.dnetlib.enabling.datasources.common.AggregationInfo;
import eu.dnetlib.repo.manager.domain.*;
import eu.dnetlib.repo.manager.domain.MetricsInfo;
import eu.dnetlib.repo.manager.domain.RepositorySnippet;
import eu.dnetlib.repo.manager.domain.RepositorySummaryInfo;
import eu.dnetlib.repo.manager.domain.broker.BrowseEntry;
import eu.dnetlib.repo.manager.exception.BrokerException;
import eu.dnetlib.repo.manager.exception.RepositoryServiceException;

2
src/main/java/eu/dnetlib/repo/manager/service/EmailUtils.java
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@ -1,9 +1,9 @@
package eu.dnetlib.repo.manager.service;
import eu.dnetlib.domain.data.PiwikInfo;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.repo.manager.domain.Repository;
import eu.dnetlib.repo.manager.domain.RepositoryInterface;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import org.springframework.scheduling.annotation.Async;
import org.springframework.security.core.Authentication;

2
src/main/java/eu/dnetlib/repo/manager/service/EmailUtilsImpl.java
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@ -1,9 +1,9 @@
package eu.dnetlib.repo.manager.service;
import eu.dnetlib.domain.data.PiwikInfo;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.repo.manager.domain.Repository;
import eu.dnetlib.repo.manager.domain.RepositoryInterface;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.repo.manager.exception.ValidationServiceException;
import eu.dnetlib.utils.MailLibrary;
import org.apache.log4j.Logger;

2
src/main/java/eu/dnetlib/repo/manager/service/PiWikServiceImpl.java
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@ -2,9 +2,9 @@ package eu.dnetlib.repo.manager.service;
import com.fasterxml.jackson.databind.ObjectMapper;
import eu.dnetlib.domain.data.PiwikInfo;
import eu.dnetlib.repo.manager.domain.Repository;
import eu.dnetlib.repo.manager.domain.OrderByField;
import eu.dnetlib.repo.manager.domain.OrderByType;
import eu.dnetlib.repo.manager.domain.Repository;
import eu.dnetlib.repo.manager.exception.RepositoryServiceException;
import org.apache.commons.codec.digest.DigestUtils;
import org.apache.log4j.Logger;

4
src/main/java/eu/dnetlib/repo/manager/service/RepositoryServiceImpl.java
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@ -5,11 +5,9 @@ import com.google.gson.JsonArray;
import com.google.gson.JsonElement;
import com.google.gson.JsonObject;
import eu.dnetlib.api.functionality.ValidatorServiceException;
import eu.dnetlib.enabling.datasources.common.AggregationInfo;
import eu.dnetlib.repo.manager.domain.Repository;
import eu.dnetlib.repo.manager.domain.RepositoryInterface;
import eu.dnetlib.domain.enabling.Vocabulary;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.enabling.datasources.common.AggregationInfo;
import eu.dnetlib.repo.manager.domain.*;
import eu.dnetlib.repo.manager.domain.dto.Role;
import eu.dnetlib.repo.manager.domain.dto.User;

2
src/main/java/eu/dnetlib/repo/manager/service/ValidatorService.java
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@ -5,8 +5,8 @@ import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.domain.functionality.validator.RuleSet;
import eu.dnetlib.domain.functionality.validator.StoredJob;
import eu.dnetlib.repo.manager.domain.InterfaceInformation;
import eu.dnetlib.repo.manager.exception.ValidationServiceException;
import eu.dnetlib.repo.manager.exception.ResourceNotFoundException;
import eu.dnetlib.repo.manager.exception.ValidationServiceException;
import org.json.JSONException;
import org.springframework.http.ResponseEntity;

7
src/main/java/eu/dnetlib/repo/manager/service/ValidatorServiceImpl.java
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@ -1,10 +1,13 @@
package eu.dnetlib.repo.manager.service;
import eu.dnetlib.api.functionality.ValidatorServiceException;
import eu.dnetlib.repo.manager.domain.RepositoryInterface;
import eu.dnetlib.domain.functionality.validator.*;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.domain.functionality.validator.Rule;
import eu.dnetlib.domain.functionality.validator.RuleSet;
import eu.dnetlib.domain.functionality.validator.StoredJob;
import eu.dnetlib.repo.manager.domain.Constants;
import eu.dnetlib.repo.manager.domain.InterfaceInformation;
import eu.dnetlib.repo.manager.domain.RepositoryInterface;
import eu.dnetlib.repo.manager.exception.ValidationServiceException;
import eu.dnetlib.repo.manager.utils.CrisValidatorUtils;
import eu.dnetlib.repo.manager.utils.OaiTools;

2
src/main/java/eu/dnetlib/repo/manager/service/security/AuthoritiesUpdater.java
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@ -9,8 +9,8 @@ import org.springframework.security.core.context.SecurityContext;
import org.springframework.security.core.context.SecurityContextHolder;
import org.springframework.security.oauth2.common.exceptions.UnauthorizedClientException;
import org.springframework.security.web.context.HttpSessionSecurityContextRepository;
import org.springframework.session.Session;
import org.springframework.session.FindByIndexNameSessionRepository;
import org.springframework.session.Session;
import org.springframework.stereotype.Service;
import java.util.Collection;

4
src/main/java/eu/dnetlib/repo/manager/service/security/AuthorizationServiceImpl.java
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@ -1,6 +1,5 @@
package eu.dnetlib.repo.manager.service.security;
import com.google.gson.JsonArray;
import com.google.gson.JsonElement;
import eu.dnetlib.repo.manager.domain.dto.User;
import eu.dnetlib.repo.manager.exception.ResourceNotFoundException;
@ -10,15 +9,12 @@ import org.apache.log4j.Logger;
import org.mitre.openid.connect.model.OIDCAuthenticationToken;
import org.mitre.openid.connect.model.UserInfo;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.security.core.GrantedAuthority;
import org.springframework.security.core.context.SecurityContextHolder;
import org.springframework.stereotype.Service;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
import java.util.List;
import java.util.stream.Collectors;
@Service("authorizationService")
public class AuthorizationServiceImpl implements AuthorizationService {

6
src/main/java/eu/dnetlib/repo/manager/utils/Converter.java
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@ -15,9 +15,9 @@ import java.io.BufferedReader;
import java.io.IOException;
import java.io.InputStream;
import java.io.InputStreamReader;
import java.text.ParseException;
import java.text.SimpleDateFormat;
import java.util.*;
import java.util.ArrayList;
import java.util.List;
import java.util.Objects;
@Component
public class Converter {

4
src/main/resources/application-context.xml
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@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:context="http://www.springframework.org/schema/context" xmlns:tx="http://www.springframework.org/schema/tx"
xmlns:context="http://www.springframework.org/schema/context"
xsi:schemaLocation="http://www.springframework.org/schema/beans
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx.xsd">
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd">
<context:annotation-config/>

3
src/main/webapp/WEB-INF/applicationContext.xml
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@ -1,12 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:tx="http://www.springframework.org/schema/tx"
xmlns:mvc="http://www.springframework.org/schema/mvc"
xsi:schemaLocation="http://www.springframework.org/schema/beans
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd
http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx.xsd
http://www.springframework.org/schema/mvc http://www.springframework.org/schema/mvc/spring-mvc-3.1.xsd">
<import resource="classpath*:/application-context.xml"/>

4
src/test/resources/application-context.xml
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@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:context="http://www.springframework.org/schema/context" xmlns:tx="http://www.springframework.org/schema/tx"
xmlns:context="http://www.springframework.org/schema/context"
xsi:schemaLocation="http://www.springframework.org/schema/beans
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx.xsd">
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd">
<context:annotation-config/>

6
src/test/resources/applicationContext.xml
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@ -1,13 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<beans xmlns="http://www.springframework.org/schema/beans"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xmlns:tx="http://www.springframework.org/schema/tx"
xmlns:mvc="http://www.springframework.org/schema/mvc"
xsi:schemaLocation="http://www.springframework.org/schema/beans
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd
http://www.springframework.org/schema/tx http://www.springframework.org/schema/tx/spring-tx.xsd
http://www.springframework.org/schema/mvc http://www.springframework.org/schema/mvc/spring-mvc-3.1.xsd">
http://www.springframework.org/schema/beans/spring-beans-4.0.xsd">
<import resource="classpath*:/application-context.xml"/>