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uoa-repository-manager-service
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merged branch springboot - 61629:HEAD

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cris-regisration
Antonis Lempesis 3 years ago
parent 746f3bbfbe
commit b5f1c113c6
23 changed files with 727 additions and 740 deletions
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5
Dockerfile
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@ -1,9 +1,10 @@
FROM tomcat:7.0.90-jre8
#FROM tomcat:7.0.90-jre8
FROM tomcat:8.5.71-jre8-openjdk-bullseye
MAINTAINER "pkanakakis@di.uoa.gr"
RUN ["rm", "-fr", "/usr/local/tomcat/webapps/ROOT"]
COPY ./target/uoa-repository-manager-service.war /usr/local/tomcat/webapps/uoa-repository-manager-service.war
#COPY src/main/resources/dnet-override-new.properties /usr/local/tomcat/lib/dnet-override.properties
COPY src/main/resources/application.properties /usr/local/tomcat/lib/dnet-override.properties
COPY validator.env /usr/local/tomcat/lib/dnet-override.properties
#COPY src/main/resources/application.properties /usr/local/tomcat/lib/application.properties
#COPY src/main/resources/email-texts.properties /usr/local/tomcat/lib/email-texts.properties
VOLUME /var/log/uoa-repository-manager-service:/var/log/uoa-repository-manager-service/

294
pom.xml
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@ -4,48 +4,139 @@
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<parent>
<groupId>eu.dnetlib</groupId>
<artifactId>dnet45-parent</artifactId>
<version>1.0.0-SNAPSHOT</version>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-parent</artifactId>
<version>2.5.4</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-repository-manager-service</artifactId>
<version>1.0.0-SNAPSHOT</version>
<packaging>war</packaging>
<properties>
<spring.boot.version>2.5.4</spring.boot.version>
</properties>
<dependencies>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter</artifactId>
<exclusions>
<exclusion>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-logging</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-log4j2</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-web</artifactId>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-webmvc</artifactId>
<version>${spring.version}</version>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-jdbc</artifactId>
</dependency>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-validator-annotation-processor</artifactId>
<version>4.1.0.Final</version>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-actuator-autoconfigure</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-tomcat</artifactId>
<!--<scope>provided</scope>-->
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-data-redis</artifactId>
</dependency>
<dependency>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-validation</artifactId>
</dependency>
<!-- https://mvnrepository.com/artifact/org.springframework.cloud/spring-cloud-starter-netflix-hystrix -->
<!--
<dependency>
<groupId>org.springframework.cloud</groupId>
<artifactId>spring-cloud-starter-netflix-hystrix</artifactId>
<version>2.2.9.RELEASE</version>
</dependency>
<dependency>
<groupId>org.springframework.cloud</groupId>
<artifactId>spring-cloud-starter-bootstrap</artifactId>
<version>3.0.1</version>
</dependency>
-->
<!--
<dependency>
<groupId>javax.el</groupId>
<artifactId>javax.el-api</artifactId>
<version>3.0.0</version>
</dependency>
-->
<dependency>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
<version>${log4j.version}</version>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-clients</artifactId>
<version>[2.0.0-SNAPSHOT, 3.0.0)</version>
<exclusions>
<exclusion>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
</exclusion>
<exclusion>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
</exclusion>
<exclusion>
<groupId>com.google.gwt</groupId>
<artifactId>gwt-user</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>eu.dnetlib</groupId>
<artifactId>dnet-runtime</artifactId>
<version>[1.0.0-SNAPSHOT, 2.0.0)</version>
<exclusions>
<exclusion> <!-- declare the exclusion here -->
<groupId>org.apache.geronimo.specs</groupId>
<artifactId>geronimo-javamail_1.4_spec</artifactId>
</exclusion>
<version>1.0.2-SNAPSHOT</version>
<exclusions>
<exclusion>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<dependency>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-utils</artifactId>
<artifactId>uoa-hcm</artifactId>
<version>[2.0.0-SNAPSHOT, 3.0.0)</version>
<exclusions>
<exclusion>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
</exclusion>
</exclusions>
</dependency>
<!-- <dependency>-->
<!-- <groupId>org.springframework</groupId>-->
<!-- <artifactId>spring-webmvc</artifactId>-->
<!-- <version>${spring.version}</version>-->
<!-- </dependency>-->
<!-- <dependency>-->
<!-- <groupId>org.hibernate</groupId>-->
<!-- <artifactId>hibernate-validator-annotation-processor</artifactId>-->
<!-- <version>4.1.0.Final</version>-->
<!-- </dependency>-->
<!-- <dependency>-->
<!-- <groupId>log4j</groupId>-->
<!-- <artifactId>log4j</artifactId>-->
<!-- <version>${log4j.version}</version>-->
<!-- </dependency>-->
<dependency>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-domain</artifactId>
@ -55,6 +146,10 @@
<groupId>cglib</groupId>
<artifactId>cglib</artifactId>
</exclusion>
<exclusion>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
@ -79,22 +174,6 @@
<version>2.2</version>
</dependency>
<dependency>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-commons</artifactId>
<version>[2.0.0-SNAPSHOT, 3.0.0)</version>
</dependency>
<dependency>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-clients</artifactId>
<version>[2.0.0-SNAPSHOT, 3.0.0)</version>
</dependency>
<dependency>
<groupId>eu.dnetlib</groupId>
<artifactId>uoa-hcm</artifactId>
<version>[2.0.0-SNAPSHOT, 3.0.0)</version>
</dependency>
<dependency>
<groupId>commons-io</groupId>
<artifactId>commons-io</artifactId>
@ -112,36 +191,37 @@
<version>2.7.2</version>
</dependency>
<dependency>
<groupId>xerces</groupId>
<artifactId>xercesImpl</artifactId>
<version>2.11.0</version>
</dependency>
<!-- <dependency>-->
<!-- <groupId>xerces</groupId>-->
<!-- <artifactId>xercesImpl</artifactId>-->
<!-- <version>2.11.0</version>-->
<!-- </dependency>-->
<!--
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
<version>2.5.1</version>
<version>2.9.4</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>2.5.1</version>
<version>2.9.4</version>
<scope>compile</scope>
</dependency>
-->
<!-- <dependency>-->
<!-- <groupId>org.springframework</groupId>-->
<!-- <artifactId>spring-context</artifactId>-->
<!-- <version>${spring.version}</version>-->
<!-- </dependency>-->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-context</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-jdbc</artifactId>
<version>${spring.version}</version>
</dependency>
<!-- <dependency>-->
<!-- <groupId>org.springframework</groupId>-->
<!-- <artifactId>spring-jdbc</artifactId>-->
<!-- <version>${spring.version}</version>-->
<!-- </dependency>-->
<dependency>
<groupId>com.sun.jersey</groupId>
@ -185,11 +265,11 @@
</dependency>
<!-- https://mvnrepository.com/artifact/org.apache.tomcat/tomcat-catalina -->
<dependency>
<groupId>org.apache.tomcat</groupId>
<artifactId>tomcat-catalina</artifactId>
<version>9.0.22</version>
</dependency>
<!-- <dependency>-->
<!-- <groupId>org.apache.tomcat</groupId>-->
<!-- <artifactId>tomcat-catalina</artifactId>-->
<!-- <version>9.0.22</version>-->
<!-- </dependency>-->
<dependency>
<groupId>commons-fileupload</groupId>
@ -211,15 +291,27 @@
<dependency>
<groupId>org.springframework.session</groupId>
<artifactId>spring-session-data-redis</artifactId>
<version>1.3.1.RELEASE</version>
</dependency>
<!--
<dependency>
<groupId>org.springframework.session</groupId>
<artifactId>spring-session-data-redis</artifactId>
<version>2.5.1</version>
<type>pom</type>
</dependency>
</dependency>
-->
<!-- https://mvnrepository.com/artifact/redis.clients/jedis -->
<dependency>
<groupId>redis.clients</groupId>
<artifactId>jedis</artifactId>
<version>2.9.0</version>
</dependency>
<version>${jedis.version}</version>
<!--<version>3.7.0</version>-->
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-pool2</artifactId>
</dependency>
<dependency>
<groupId>com.google.code.gson</groupId>
<artifactId>gson</artifactId>
@ -231,18 +323,18 @@
<artifactId>cors-filter</artifactId>
<version>2.5</version>
</dependency>
<dependency>
<groupId>com.netflix.hystrix</groupId>
<artifactId>hystrix-core</artifactId>
<version>1.5.18</version>
</dependency>
</dependency>
<!--
<dependency>
<groupId>com.netflix.rxjava</groupId>
<artifactId>rxjava-core</artifactId>
<version>0.20.7</version>
</dependency>
-->
<!-- https://mvnrepository.com/artifact/javax.xml.ws/jaxws-api -->
<dependency>
<groupId>javax.xml.ws</groupId>
@ -297,21 +389,21 @@
</dependency>
<!-- Enable micrometer >> -->
<dependency> <!-- TODO: remove this with ActuatorConfig class -->
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-actuator</artifactId>
<version>1.3.5.RELEASE</version>
</dependency>
<!-- <dependency> &lt;!&ndash; TODO: remove this with ActuatorConfig class &ndash;&gt;-->
<!-- <groupId>org.springframework.boot</groupId>-->
<!-- <artifactId>spring-boot-actuator</artifactId>-->
<!-- <version>1.3.5.RELEASE</version>-->
<!-- </dependency>-->
<!-- <dependency>-->
<!-- <groupId>org.springframework.boot</groupId>-->
<!-- <artifactId>spring-boot-actuator-autoconfigure</artifactId>-->
<!-- <version>2.1.18.RELEASE</version>-->
<!-- </dependency>-->
<dependency>
<groupId>io.micrometer</groupId>
<artifactId>micrometer-core</artifactId>
<version>1.7.2</version>
</dependency>
<!-- <dependency>-->
<!-- <groupId>io.micrometer</groupId>-->
<!-- <artifactId>micrometer-core</artifactId>-->
<!-- <version>1.7.2</version>-->
<!-- </dependency>-->
<dependency>
<groupId>io.micrometer</groupId>
<artifactId>micrometer-registry-prometheus</artifactId>
@ -322,9 +414,23 @@
</dependencies>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>org.springframework.session</groupId>
<artifactId>spring-session-bom</artifactId>
<version>2021.0.2</version>
<type>pom</type>
<scope>import</scope>
</dependency>
</dependencies>
</dependencyManagement>
<build>
<outputDirectory>${project.build.directory}/${project.build.finalName}/WEB-INF/classes</outputDirectory>
<plugins>
<!--
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
@ -335,7 +441,6 @@
<encoding>UTF-8</encoding>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
@ -343,7 +448,13 @@
<configuration>
<failOnMissingWebXml>false</failOnMissingWebXml>
</configuration>
</plugin>
</plugin>
-->
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
</plugin>
<plugin>
<groupId>cz.habarta.typescript-generator</groupId>
<artifactId>typescript-generator-maven-plugin</artifactId>
@ -377,5 +488,30 @@
</resources>
</build>
<repositories>
<repository>
<id>dnet-deps</id>
<name>dnet-dependencies</name>
<url>https://maven.d4science.org/nexus/content/repositories/dnet-deps</url>
<layout>default</layout>
</repository>
<repository>
<id>dnet45-snapshots</id>
<name>D-Net 45 Snapshots</name>
<url>https://maven.d4science.org/nexus/content/repositories/dnet45-snapshots</url>
<layout>default</layout>
<snapshots>
<enabled>true</enabled>
</snapshots>
</repository>
<repository>
<id>dnet45-releases</id>
<name>D-Net 45 Releases</name>
<url>https://maven.d4science.org/nexus/content/repositories/dnet45-releases</url>
<layout>default</layout>
<snapshots>
<enabled>true</enabled>
</snapshots>
</repository>
</repositories>
</project>

12
src/main/java/eu/dnetlib/repo/manager/Application.java
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@ -0,0 +1,12 @@
package eu.dnetlib.repo.manager;
import org.springframework.boot.SpringApplication;
import org.springframework.boot.autoconfigure.SpringBootApplication;
@SpringBootApplication
public class Application {
public static void main(String[] args) {
SpringApplication.run(Application.class, args);
}
}

39
src/main/java/eu/dnetlib/repo/manager/config/ActuatorConfig.java
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@ -1,39 +0,0 @@
package eu.dnetlib.repo.manager.config;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.boot.actuate.autoconfigure.EndpointAutoConfiguration;
import org.springframework.boot.actuate.autoconfigure.HealthIndicatorAutoConfiguration;
import org.springframework.boot.actuate.autoconfigure.PublicMetricsAutoConfiguration;
import org.springframework.boot.actuate.endpoint.MetricsEndpoint;
import org.springframework.boot.actuate.endpoint.mvc.EndpointHandlerMapping;
import org.springframework.boot.actuate.endpoint.mvc.EndpointMvcAdapter;
import org.springframework.boot.actuate.endpoint.mvc.MvcEndpoint;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import org.springframework.context.annotation.Import;
import org.springframework.web.servlet.config.annotation.EnableWebMvc;
import java.util.Collection;
@Configuration
@EnableWebMvc
@Import({
EndpointAutoConfiguration.class,
PublicMetricsAutoConfiguration.class,
// HealthIndicatorAutoConfiguration.class
})
public class ActuatorConfig { // TODO: remove this with migration to Spring Boot 2
@Bean
@Autowired
public EndpointHandlerMapping endpointHandlerMapping(Collection<? extends MvcEndpoint> endpoints) {
return new EndpointHandlerMapping(endpoints);
}
@Bean
@Autowired
public EndpointMvcAdapter metricsEndPoint(MetricsEndpoint delegate) {
return new EndpointMvcAdapter(delegate);
}
}

27
src/main/java/eu/dnetlib/repo/manager/config/AsyncConfiguration.java
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@ -0,0 +1,27 @@
package eu.dnetlib.repo.manager.config;
import eu.dnetlib.repo.manager.service.ValidatorServiceImpl;
import org.apache.log4j.Logger;
import org.springframework.aop.interceptor.AsyncUncaughtExceptionHandler;
import org.springframework.context.annotation.Configuration;
import org.springframework.scheduling.annotation.AsyncConfigurer;
import org.springframework.scheduling.annotation.EnableAsync;
import java.lang.reflect.Method;
@Configuration
@EnableAsync
public class AsyncConfiguration implements AsyncConfigurer {
@Override
public AsyncUncaughtExceptionHandler getAsyncUncaughtExceptionHandler() {
return new AsyncUncaughtExceptionHandler() {
private final Logger logger = Logger.getLogger(getClass());
@Override
public void handleUncaughtException(Throwable throwable, Method method, Object... objects) {
//logger.error("Async error", throwable);
}
};
}
}

156
src/main/java/eu/dnetlib/repo/manager/config/Config.java
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@ -1,75 +1,81 @@
package eu.dnetlib.repo.manager.config;
import org.apache.log4j.Logger;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.*;
import org.springframework.data.redis.connection.jedis.JedisConnectionFactory;
import org.springframework.http.HttpHeaders;
import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
import org.springframework.session.data.redis.config.annotation.web.http.EnableRedisHttpSession;
import org.springframework.session.web.http.CookieSerializer;
import org.springframework.session.web.http.DefaultCookieSerializer;
import org.springframework.web.client.RestTemplate;
import javax.annotation.PostConstruct;
@Configuration
@EnableRedisHttpSession
@PropertySource(value = {"classpath:application.properties"} )
@ComponentScan(basePackages = {
"org.eurocris.openaire.cris.validator.service",
"eu.dnetlib.repo.manager.*"})
public class Config {
private static Logger LOGGER = Logger.getLogger(Config.class);
@Value("${redis.host}")
private String host;
@Value("${redis.port:6379}")
private String port;
@Value("${redis.password}")
private String password;
@Value("${aai.mode}")
private String aai_mode;
@PostConstruct
private void init(){
LOGGER.info(String.format("Redis : %s Port : %s Password : %s",host,port,password));
}
@Bean
public JedisConnectionFactory connectionFactory() {
LOGGER.info(String.format("Redis : %s Port : %s Password : %s",host,port,password));
JedisConnectionFactory jedisConnectionFactory = new JedisConnectionFactory();
jedisConnectionFactory.setHostName(host);
jedisConnectionFactory.setPort(Integer.parseInt(port));
jedisConnectionFactory.setUsePool(true);
if(password != null) jedisConnectionFactory.setPassword(password);
return jedisConnectionFactory;
}
@Bean
public CookieSerializer cookieSerializer() {
DefaultCookieSerializer serializer = new DefaultCookieSerializer();
serializer.setCookieName("openAIRESession");
serializer.setCookiePath("/");
if(aai_mode.equalsIgnoreCase("production") || aai_mode.equalsIgnoreCase("beta"))
serializer.setDomainName(".openaire.eu");
// serializer.setDomainName(".athenarc.gr");
LOGGER.info("Serializer : " + serializer);
return serializer;
}
@Bean
public RestTemplate restTemplate() {
RestTemplate restTemplate = new RestTemplate();
restTemplate.getMessageConverters().add(new MappingJackson2HttpMessageConverter());
HttpHeaders httpHeaders = new HttpHeaders();
httpHeaders.set("Content-Type", "application/json");
return restTemplate;
}
}
package eu.dnetlib.repo.manager.config;
import eu.dnetlib.api.enabling.ISLookUpService;
import eu.dnetlib.api.functionality.ValidatorService;
import eu.dnetlib.clients.enabling.islookup.ws.ISLookUpClient;
import eu.dnetlib.clients.functionality.validator.ws.ValidatorWebService;
import eu.dnetlib.clients.functionality.validator.ws.ValidatorWebServiceClient;
import eu.dnetlib.domain.enabling.Vocabulary;
import gr.uoa.di.driver.enabling.ISLookUp;
import gr.uoa.di.driver.enabling.islookup.ISLookUpImpl;
import gr.uoa.di.driver.enabling.vocabulary.ISVocabularyLoader;
import gr.uoa.di.driver.enabling.vocabulary.VocabularyLoader;
import gr.uoa.di.driver.util.ServiceLocator;
import gr.uoa.di.driver.util.StaticServiceLocator;
import gr.uoa.di.driver.xml.VocabularyXmlConverter;
import org.apache.cxf.jaxws.JaxWsProxyFactoryBean;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.*;
@Configuration
public class Config {
@Value("${ISLookUpService.url}")
private String lookupURL;
@Value("${ValidatorService.url}")
private String validatorUrl;
@Bean(name="vocabularyLoader")
public VocabularyLoader createVocabularyLoader() throws Exception {
ISVocabularyLoader loader = new ISVocabularyLoader();
loader.setLookUp(createVocabularyLookUp());
return loader;
}
@Bean("validatorServiceLocator")
public ServiceLocator<ValidatorService> createValidatorServiceLocator() {
JaxWsProxyFactoryBean factory = new JaxWsProxyFactoryBean();
factory.setServiceClass(ValidatorWebService.class);
factory.setAddress(validatorUrl);
ValidatorWebService service = (ValidatorWebService) factory.create();
ValidatorWebServiceClient client = new ValidatorWebServiceClient();
client.setWebService(service);
StaticServiceLocator<ValidatorService> locator = new StaticServiceLocator<>();
locator.setService(client);
return locator;
}
// @Bean(name="vocabularyLookUp")
private ISLookUp<Vocabulary> createVocabularyLookUp() throws Exception {
ISLookUpImpl<Vocabulary> lookUp = new ISLookUpImpl<>();
lookUp.setLookupLocator(createIsLookupServiceLocator());
lookUp.setConverter(new VocabularyXmlConverter());
return lookUp;
}
private ServiceLocator<ISLookUpService> createIsLookupServiceLocator() throws Exception {
JaxWsProxyFactoryBean factory = new JaxWsProxyFactoryBean();
factory.setServiceClass(eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService.class);
factory.setAddress(lookupURL);
eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService client = (eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService) factory.create();
ISLookUpClient service = new ISLookUpClient();
service.setWebService(client);
StaticServiceLocator<ISLookUpService> locator = new StaticServiceLocator<>();
locator.setService(service);
return locator;
}
}

8
src/main/java/eu/dnetlib/repo/manager/config/DatasourceConfiguration.java
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@ -14,16 +14,16 @@ public class DatasourceConfiguration {
private static Logger LOGGER = Logger.getLogger(DatasourceConfiguration.class);
@Value("${repomanager.db.driverClassName}")
@Value("${services.repomanager.db.driverClassName}")
private String driverClassname;
@Value("${repomanager.db.url}")
@Value("${services.repomanager.db.url}")
private String URL;
@Value("${repomanager.db.username}")
@Value("${services.repomanager.db.username}")
private String username;
@Value("${repomanager.db.password}")
@Value("${services.repomanager.db.password}")
private String password;
@Bean

57
src/main/java/eu/dnetlib/repo/manager/config/MailConfig.java
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@ -0,0 +1,57 @@
package eu.dnetlib.repo.manager.config;
import eu.dnetlib.utils.MailLibrary;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
@Configuration
public class MailConfig {
@Value("${services.repomanager.mail.host}")
private String host;
@Value("${services.repomanager.mail.port}")
private int port;
@Value("${services.repomanager.mail.authenticate}")
private boolean authenticate;
@Value("${services.repomanager.mail.username}")
private String username;
@Value("${services.repomanager.mail.password}")
private String password;
@Value("${services.repomanager.mail.from}")
private String from;
@Value("${services.repomanager.mail.replyTo}")
private String replyTo;
@Value("${services.repomanager.mail.mode}")
private String mode;
@Value("${services.repomanager.mail.debug}")
private boolean debug;
@Bean
public MailLibrary createMailLibrary() {
MailLibrary lib = new MailLibrary();
lib.setAuthenticate(authenticate);
lib.setDebug(debug);
lib.setFrom(from);
lib.setMailhost(host);
lib.setSmtpPort(port);
lib.setMode(mode);
lib.setReplyTo(replyTo);
lib.setUsername(username);
lib.setPassword(password);
lib.setMode(mode);
lib.init();
return lib;
}
}

29
src/main/java/eu/dnetlib/repo/manager/controllers/RepositoryController.java
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@ -163,13 +163,13 @@ public class RepositoryController {
@RequestMapping(value = "/updateRepository", method = RequestMethod.POST,
consumes = MediaType.APPLICATION_JSON_VALUE)
@ResponseBody
@PreAuthorize("hasAuthority('SUPER_ADMINISTRATOR') or hasAuthority('CONTENT_PROVIDER_DASHBOARD_ADMINISTRATOR') or @authorizationService.isMemberOf(#repository.id)")
@PreAuthorize("hasAuthority('SUPER_ADMINISTRATOR') or hasAuthority('CONTENT_PROVIDER_DASHBOARD_ADMINISTRATOR') or @authorizationService.isMemberOfInterface(#repository.id)")
public Repository updateRepository(@RequestBody Repository repository, Authentication authentication) throws Exception {
return repositoryService.updateRepository(repository, authentication);
}
@RequestMapping(value = "/deleteInterface/", method = RequestMethod.DELETE)
@PreAuthorize("@authorizationService.isMemberOf(#id)")
@PreAuthorize("hasAuthority('SUPER_ADMINISTRATOR') or hasAuthority('CONTENT_PROVIDER_DASHBOARD_ADMINISTRATOR') or @authorizationService.isMemberOfInterface(#id)")
public void deleteRepositoryInterface(@RequestParam("id") String id,
@RequestParam("registeredBy") String registeredBy) {
repositoryService.deleteRepositoryInterface(id, registeredBy);
@ -180,13 +180,24 @@ public class RepositoryController {
@ResponseBody
@PreAuthorize("hasAuthority('SUPER_ADMINISTRATOR') or hasAuthority('CONTENT_PROVIDER_DASHBOARD_ADMINISTRATOR') or @authorizationService.isMemberOf(#id)")
public RepositoryInterface addRepositoryInterface(@RequestParam("datatype") String datatype,
@RequestParam("id") String id,
@RequestParam("repoId") String id,
@RequestParam("registeredBy") String registeredBy,
@RequestParam(value = "comment", required = false) String comment,
@RequestBody RepositoryInterface repositoryInterface) throws Exception {
return repositoryService.addRepositoryInterface(datatype, id, registeredBy, comment, repositoryInterface);
}
@RequestMapping(value = "/updateRepositoryInterface", method = RequestMethod.POST,
consumes = MediaType.APPLICATION_JSON_VALUE)
@ResponseBody
@PreAuthorize("hasAuthority('SUPER_ADMINISTRATOR') or hasAuthority('CONTENT_PROVIDER_DASHBOARD_ADMINISTRATOR') or @authorizationService.isMemberOf(#id)")
public RepositoryInterface updateRepositoryInterface(@RequestParam("repoId") String id,
@RequestParam("registeredBy") String registeredBy,
@RequestParam(value = "comment", required = false) String comment,
@RequestBody RepositoryInterface repositoryInterface) throws Exception {
return repositoryService.updateRepositoryInterface(id, registeredBy, comment, repositoryInterface);
}
@RequestMapping(value = "/getUrlsOfUserRepos/{page}/{size}/", method = RequestMethod.GET,
produces = MediaType.APPLICATION_JSON_VALUE)
@ResponseBody
@ -231,18 +242,6 @@ public class RepositoryController {
return repositoryService.getListLatestUpdate(mode);
}
@RequestMapping(value = "/updateRepositoryInterface", method = RequestMethod.POST,
consumes = MediaType.APPLICATION_JSON_VALUE)
@ResponseBody
@PreAuthorize("hasAuthority('SUPER_ADMINISTRATOR') or hasAuthority('CONTENT_PROVIDER_DASHBOARD_ADMINISTRATOR') or @authorizationService.isMemberOf(#id)")
public RepositoryInterface updateRepositoryInterface(@RequestParam("id") String id,
@RequestParam("registeredBy") String registeredBy,
@RequestParam(value = "comment", required = false) String comment,
@RequestBody RepositoryInterface repositoryInterface) throws Exception {
return repositoryService.updateRepositoryInterface(id, registeredBy, comment, repositoryInterface);
}
///////////////////////////////////////////////////////////////////////////////////////////////////////////
///////////////////////////////////////////////////////////////////////////////////////////////////////////

27
src/main/java/eu/dnetlib/repo/manager/service/BrokerServiceImpl.java
Unescape Escape View File

@ -50,9 +50,6 @@ public class BrokerServiceImpl implements BrokerService {
private HashMap<String, Term> topics = new HashMap<String, Term>();
@Autowired
private EmailUtils emailUtils;
@PostConstruct
private void initDnetTopicsMap() {
@ -66,8 +63,7 @@ public class BrokerServiceImpl implements BrokerService {
for (JsonNode term : root.path("terms"))
topics.put(term.path("code").textValue(), parseTerm(term));
} catch (IOException e) {
LOGGER.debug("Exception on initDnetTopicsMap", e);
emailUtils.reportException(e);
LOGGER.error("Exception on initDnetTopicsMap", e);
}
}
@ -93,8 +89,7 @@ public class BrokerServiceImpl implements BrokerService {
// ret.setDatasourcesOfOthers(getDatasourcesOfUserType(getRepositoriesOfUser(user)));
// }
} catch (Exception e) {
LOGGER.debug("Exception on getDatasourcesOfUser", e);
emailUtils.reportException(e);
LOGGER.error("Exception on getDatasourcesOfUser", e);
}
long end = System.currentTimeMillis();
System.out.println("Getting datasources of user in " + (end - start) + "ms");
@ -117,8 +112,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<List<BrowseEntry>>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on getTopicsForDatasource", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
@ -151,13 +144,9 @@ public class BrokerServiceImpl implements BrokerService {
}
);
} catch (RestClientException e) {
LOGGER.debug("Exception on advancedShowEvents", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
return resp.getBody();
}
@ -210,8 +199,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<EventsPage>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on showEvents", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
return resp.getBody();
@ -236,8 +223,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<Map<String, List<SimpleSubscriptionDesc>>>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on getSimpleSubscriptionsOfUser", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
return resp.getBody();
@ -272,8 +257,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<Subscription>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on OpenaireSubscription", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
@ -296,8 +279,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<Void>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on unsubscribe", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
return new ResponseEntity<>("OK", HttpStatus.OK);
@ -320,8 +301,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<Subscription>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on getSubscription", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
return resp.getBody();
@ -351,8 +330,6 @@ public class BrokerServiceImpl implements BrokerService {
new ParameterizedTypeReference<EventsPage>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on getNotificationsBySubscriptionId", e);
emailUtils.reportException(e);
throw new BrokerException(e);
}
return resp.getBody();

3
src/main/java/eu/dnetlib/repo/manager/service/DashboardServiceImpl.java
Unescape Escape View File

@ -14,9 +14,6 @@ public class DashboardServiceImpl implements DashboardService {
private static final Logger logger = Logger.getLogger(DashboardServiceImpl.class);
@Autowired
private EmailUtils emailUtils;
@Autowired
private RepositoryService repositoryService;

29
src/main/java/eu/dnetlib/repo/manager/service/EmailUtils.java
Unescape Escape View File

@ -4,69 +4,92 @@ import eu.dnetlib.domain.data.PiwikInfo;
import eu.dnetlib.domain.data.Repository;
import eu.dnetlib.domain.data.RepositoryInterface;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import org.springframework.scheduling.annotation.Async;
import org.springframework.security.core.Authentication;
public interface EmailUtils {
void reportException(Exception exception);
@Async
void sendAdministratorRequestToEnableMetrics(PiwikInfo piwikInfo) throws Exception;
@Async
void sendUserRequestToEnableMetrics(PiwikInfo piwikInfo) throws Exception;
@Async
void sendAdministratorMetricsEnabled(PiwikInfo piwikInfo) throws Exception;
@Async
void sendUserMetricsEnabled(PiwikInfo piwikInfo) throws Exception;
/****USER REGISTRATION REQUEST EMAILS****/
@Async
void sendAdminRegistrationEmail(Repository repository, Authentication authentication) throws Exception;
@Async
void sendUserRegistrationEmail(Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminRegisterInterfaceEmail(Repository repository, String comment, RepositoryInterface repositoryInterface, Authentication authentication) throws Exception;
@Async
void sendUserRegisterInterfaceEmail(Repository repository, String comment, RepositoryInterface repositoryInterface, Authentication authentication) throws Exception;
/****SUCCESSFUL REGISTRATION RESULTS EMAILS****/
@Async
void sendUserRegistrationResultsSuccessEmail(String issuerEmail, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminRegistrationResultsSuccessEmail(String issuerEmail, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
/****FAILURE REGISTRATION RESULTS EMAILS****/
@Async
void sendUserRegistrationResultsFailureEmail(String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminRegistrationResultsFailureEmail(String issuerEmail, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
/****SUCCESSFUL UPDATE RESULTS EMAILS****/
@Async
void sendUserUpdateResultsSuccessEmail(String issuer, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminUpdateResultsSuccessEmail(String issuerEmail, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
/****FAILURE UPDATE RESULTS EMAILS****/
@Async
void sendUserUpdateResultsFailureEmail(String issuer, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminUpdateResultsFailureEmail(String issuerEmail, String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
/****VALIDATION OF CONTENT PROVIDER EMAILS****/
@Async
void sendUserValidationResults(String issuer,String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminValidationResults(String issuer,String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
/****GENERAL FAILURE OF VALIDATOR****/
@Async
void sendAdminGeneralFailure(String issuer,String jobId,RepositoryInterface repositoryInterface, Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminUpdateRepositoryInfoEmail(Repository repository, Authentication authentication) throws Exception;
@Async
void sendUserUpdateRepositoryInfoEmail(Repository repository, Authentication authentication) throws Exception;
@Async
void sendAdminUpdateInterfaceEmail(Repository repository, String comment, RepositoryInterface repositoryInterface, Authentication authentication) throws Exception;
@Async
void sendUserUpdateInterfaceEmail(Repository repository, String comment, RepositoryInterface repositoryInterface, Authentication authentication) throws Exception;
@Async
void sendSubmitJobForValidationEmail(Authentication authentication, JobForValidation jobForValidation) throws Exception;
@Async
void sendUponJobCompletion(String repoId,
String repoInterfaceId,
int scoreUsage,

165
src/main/java/eu/dnetlib/repo/manager/service/EmailUtilsImpl.java
Unescape Escape View File

@ -4,7 +4,6 @@ import eu.dnetlib.domain.data.PiwikInfo;
import eu.dnetlib.domain.data.Repository;
import eu.dnetlib.domain.data.RepositoryInterface;
import eu.dnetlib.domain.functionality.validator.JobForValidation;
import eu.dnetlib.repo.manager.config.CascadingPropertyLoader;
import eu.dnetlib.repo.manager.domain.ValidationServiceException;
import eu.dnetlib.utils.MailLibrary;
import org.apache.log4j.Logger;
@ -15,76 +14,36 @@ import org.springframework.security.core.Authentication;
import org.springframework.security.core.context.SecurityContextHolder;
import org.springframework.stereotype.Component;
import javax.annotation.PostConstruct;
import java.io.PrintWriter;
import java.io.StringWriter;
import java.io.Writer;
import java.util.ArrayList;
import java.util.Collections;
import java.util.List;
import java.util.stream.Collectors;
@Component("emailUtils")
public class EmailUtilsImpl implements EmailUtils {
private static Logger LOGGER = Logger.getLogger(EmailUtilsImpl.class);
private List<String> specialRecipients = new ArrayList<String>();
private boolean override = false, logonly = false;
private String overrideEmail = null, from = null;
private final static Logger LOGGER = Logger.getLogger(EmailUtilsImpl.class);
private final MailLibrary mailLibrary;
private final CascadingPropertyLoader pLoader;
private final RepositoryService repositoryService;
@Value("${services.repo-manager.baseUrl}")
@Value("${services.repomanager.baseUrl}")
private String baseUrl;
@Value("${services.repo-manager.adminEmail}")
private String adminEmail;
@Value("${services.repomanager.usagestats.adminEmail}")
private String usageStatsAdminEmail;
@Value("${services.provide.adminEmail}")
@Value("${services.repomanager.provide.adminEmail}")
private String provideAdminEmail;
@Value("${validator.results.url}")
private String valBaseUrl;
@Autowired
EmailUtilsImpl(MailLibrary mailLibrary, CascadingPropertyLoader pLoader,
RepositoryService repositoryService) {
EmailUtilsImpl(MailLibrary mailLibrary, RepositoryService repositoryService) {
this.mailLibrary = mailLibrary;
this.pLoader = pLoader;
this.repositoryService = repositoryService;
}
@PostConstruct
public void init(){
System.out.println("url -> " + this.baseUrl);
}
@Override
public void reportException(Exception exception) {
Writer writer = new StringWriter();
PrintWriter printWriter = new PrintWriter(writer);
exception.printStackTrace(printWriter);
List<String> recipients = new ArrayList<String>();
try {
recipients.add(this.adminEmail);
String message = "An exception has occurred:\n"+writer.toString();
String subject = "Automatic Bug Report";
this.sendMail(recipients, subject, message, false, null);
} catch (Exception e) {
LOGGER.error("Error sending error report", e);
}
}
@Override
public void sendAdministratorRequestToEnableMetrics(PiwikInfo piwikInfo) throws Exception {
@ -106,7 +65,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Best,\n" +
"The OpenAIRE team";
this.sendMail(this.usageStatsAdminEmail, subject, message, false, null);
this.sendMail(this.usageStatsAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending request to enable metrics email to administrator: " + this.usageStatsAdminEmail, e);
@ -143,7 +102,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Best,\n" +
"The OpenAIRE team";
this.sendMail(piwikInfo.getRequestorEmail(), subject, message, false, null);
this.sendMail(piwikInfo.getRequestorEmail(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending request to enable metrics email to user: " + piwikInfo.getRequestorEmail(), e);
@ -170,7 +129,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Best,\n" +
"The OpenAIRE team";
this.sendMail(this.usageStatsAdminEmail, subject, message, false, null);
this.sendMail(this.usageStatsAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending metrics enabled notification email to administator: " + this.usageStatsAdminEmail, e);
@ -198,7 +157,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Best,\n" +
"The OpenAIRE team";
this.sendMail(piwikInfo.getRequestorEmail(), subject, message, false, null);
this.sendMail(piwikInfo.getRequestorEmail(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending metrics enabled notification email to user: " + piwikInfo.getRequestorEmail(), e);
@ -224,7 +183,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to the administrator", e);
@ -250,7 +209,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(repository.getRegisteredBy(), subject, message, false, null);
this.sendMail(repository.getRegisteredBy(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -285,7 +244,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration of interface notification email to the administrator", e);
@ -319,7 +278,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(repository.getRegisteredBy(), subject, message, false, null);
this.sendMail(repository.getRegisteredBy(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration of interface notification email to user: " + repository.getRegisteredBy(), e);
@ -352,7 +311,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(repository.getRegisteredBy(), subject, message, false, null);
this.sendMail(repository.getRegisteredBy(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -385,7 +344,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -417,7 +376,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(repository.getRegisteredBy(), subject, message, false, null);
this.sendMail(repository.getRegisteredBy(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -450,7 +409,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -481,7 +440,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(issuer, subject, message, false, null);
this.sendMail(issuer, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to the administrator", e);
@ -512,7 +471,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to the administrator", e);
@ -545,7 +504,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(issuer, subject, message, false, null);
this.sendMail(issuer, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -578,7 +537,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -601,7 +560,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(issuer, subject, message, false, null);
this.sendMail(issuer, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending validation submission notification email to user: " + issuer, e);
@ -624,7 +583,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending validation submission notification email to user: " + issuer, e);
@ -644,7 +603,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending validation submission notification email to user: " + issuer, e);
@ -666,7 +625,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to the administrator", e);
@ -690,7 +649,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(repository.getRegisteredBy(), subject, message, false, null);
this.sendMail(repository.getRegisteredBy(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -723,7 +682,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(this.provideAdminEmail, subject, message, false, null);
this.sendMail(this.provideAdminEmail, subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to the administrator", e);
@ -757,7 +716,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(repository.getRegisteredBy(), subject, message, false, null);
this.sendMail(repository.getRegisteredBy(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending registration notification email to user: " + repository.getRegisteredBy(), e);
@ -780,7 +739,7 @@ public class EmailUtilsImpl implements EmailUtils {
"Regards,\n" +
"the OpenAIRE technical team\n";
this.sendMail(jobForValidation.getUserEmail(), subject, message, false, null);
this.sendMail(jobForValidation.getUserEmail(), subject, message);
} catch (Exception e) {
LOGGER.error("Error while sending validation submission notification email to user: " + jobForValidation.getUserEmail(), e);
@ -833,73 +792,17 @@ public class EmailUtilsImpl implements EmailUtils {
}
private void sendMail(String email, String subject, String message, boolean sendToSpecial, List<String> repoAdminMails) throws Exception {
ArrayList<String> to = new ArrayList<String>();
to.add(email);
this.sendMail(to,subject,message,sendToSpecial,repoAdminMails);
private void sendMail(String email, String subject, String message) throws Exception {
this.sendMail(Collections.singletonList(email), subject, message);
}
public void sendMail(List<String> recipients, String subject, String message, boolean sendToSpecial, List<String> repoAdminMails) throws Exception {
public void sendMail(List<String> recipients, String subject, String message) throws Exception {
try {
if (sendToSpecial) {
recipients.addAll(this.specialRecipients);
}
if (repoAdminMails != null)
recipients.addAll(repoAdminMails);
if (this.override) {
recipients.clear();
recipients.add(overrideEmail);
}
if (!logonly)
mailLibrary.sendEmail(recipients.toArray(new String[]{}), subject, message);
LOGGER.debug("Sending mail to Recipients: " + recipients + " Subject: " + subject + " Message: " + message);
mailLibrary.sendEmail(recipients.toArray(new String[]{}), subject, message);
} catch (Exception e) {
LOGGER.error("Error sending mail to Recipients: " + recipients + " Subject: " + subject + " Message: " + message, e);
throw new Exception(e);
}
}
private String getEmailProperty(String key) {
return pLoader.getProperties().getProperty(key);
}
public void setSpecialRecipients(String specialRecipients) {
String[] recps = specialRecipients.split(",");
for (String recp : recps) {
recp = recp.trim();
this.specialRecipients.add(recp);
throw e;
}
}
public void setOverride(boolean override) {
this.override = override;
}
public void setOverrideEmail(String overrideEmail) {
this.overrideEmail = overrideEmail;
}
public String getFrom() {
return from;
}
public void setFrom(String from) {
this.from = from;
}
public boolean isLogonly() {
return logonly;
}
public void setLogonly(boolean logonly) {
this.logonly = logonly;
}
}

7
src/main/java/eu/dnetlib/repo/manager/service/PiWikServiceImpl.java
Unescape Escape View File

@ -169,11 +169,10 @@ public class PiWikServiceImpl implements PiWikService {
} catch (EmptyResultDataAccessException e) {
LOGGER.error("Error while approving piwik site: ", e);
emailUtils.reportException(e);
throw new RepositoryServiceException("General error", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
} catch (Exception e) {
LOGGER.error("Error while sending email to administrator or user about the enabling of metrics", e);
emailUtils.reportException(e);
throw new RepositoryServiceException(e, RepositoryServiceException.ErrorCode.GENERAL_ERROR);
}
return new ResponseEntity<>("OK", HttpStatus.OK);
}
@ -204,15 +203,13 @@ public class PiWikServiceImpl implements PiWikService {
emailUtils.sendUserRequestToEnableMetrics(piwikInfo);
} catch (UnsupportedEncodingException uee) {
LOGGER.error("Error while creating piwikScript URL", uee);
emailUtils.reportException(uee);
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
} catch (IOException ioe) {
LOGGER.error("Error while creating piwik site", ioe);
emailUtils.reportException(ioe);
throw new RepositoryServiceException("login.generalError", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
} catch (Exception e) {
LOGGER.error("Error while sending email to administrator or user about the request to enable metrics", e);
emailUtils.reportException(e);
throw new RepositoryServiceException(e, RepositoryServiceException.ErrorCode.GENERAL_ERROR);
}
return piwikInfo;
}

312
src/main/java/eu/dnetlib/repo/manager/service/RepositoryServiceImpl.java
Unescape Escape View File

@ -36,7 +36,6 @@ import org.springframework.security.core.context.SecurityContextHolder;
import org.springframework.stereotype.Service;
import org.springframework.util.MimeType;
import org.springframework.web.client.HttpClientErrorException;
import org.springframework.web.client.RestClientException;
import org.springframework.web.client.RestTemplate;
import org.springframework.web.util.UriComponents;
import org.springframework.web.util.UriComponentsBuilder;
@ -178,17 +177,11 @@ public class RepositoryServiceImpl implements RepositoryService {
UriComponents uriComponents = searchDatasource(Integer.toString(Math.abs(page)), Integer.toString(Math.abs(size)));
RequestFilter requestFilter = new RequestFilter();
try {
for (String repoId : ids) {
requestFilter.setId(repoId);
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
for (String repoId : ids) {
requestFilter.setId(repoId);
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
repos.addAll(Converter.jsonToRepositoryList(new JSONObject(rs)));
}
} catch (JSONException e) {
LOGGER.debug("Exception on getRepositoriesOfUser", e);
emailUtils.reportException(e);
throw e;
repos.addAll(Converter.jsonToRepositoryList(new JSONObject(rs)));
}
for (Repository r : repos)
@ -264,23 +257,20 @@ public class RepositoryServiceImpl implements RepositoryService {
requestFilter.setCountry(country);
requestFilter.setCollectedfrom(filterKey);
try {
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
while (jsonArray.length() > 0) {
resultSet.addAll(mapper.readValue(String.valueOf(jsonArray),
mapper.getTypeFactory().constructCollectionType(List.class, RepositorySnippet.class)));
page += 1;
uriComponents = searchSnipperDatasource(String.valueOf(page), String.valueOf(size));
rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
}
return resultSet;
} catch (Exception e) {
LOGGER.debug("Exception on getRepositoriesByCountry", e);
emailUtils.reportException(e);
throw e;
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
while (jsonArray.length() > 0) {
LOGGER.debug("json: " + jsonArray);
resultSet.addAll(mapper.readValue(String.valueOf(jsonArray),
mapper.getTypeFactory().constructCollectionType(List.class, RepositorySnippet.class)));
page += 1;
uriComponents = searchSnipperDatasource(String.valueOf(page), String.valueOf(size));
rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
}
return resultSet;
}
public List<RepositorySnippet> searchRegisteredRepositories(String country, String typology, String englishName,
@ -383,21 +373,14 @@ public class RepositoryServiceImpl implements RepositoryService {
RequestFilter requestFilter = new RequestFilter();
requestFilter.setId(id);
try {
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
if (jsonArray.length() == 0)
throw new ResourceNotFoundException();
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
repo = Converter.jsonToRepositorySnippetObject(jsonArray.getJSONObject(0));
return repo;
} catch (JSONException e) {
LOGGER.debug("Exception on getRepositoryById", e);
emailUtils.reportException(e);
throw e;
}
if (jsonArray.length() == 0)
throw new ResourceNotFoundException();
repo = Converter.jsonToRepositorySnippetObject(jsonArray.getJSONObject(0));
return repo;
}
@Override
@ -409,21 +392,14 @@ public class RepositoryServiceImpl implements RepositoryService {
RequestFilter requestFilter = new RequestFilter();
requestFilter.setId(id);
try {
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONArray jsonArray = (JSONArray) new JSONObject(rs).get("datasourceInfo");
if (jsonArray.length() == 0)
throw new ResourceNotFoundException();
repo = Converter.jsonToRepositoryObject(jsonArray.getJSONObject(0));
return updateRepositoryInfo(repo);
} catch (JSONException e) {
LOGGER.debug("Exception on getRepositoryById", e);
emailUtils.reportException(e);
throw e;
}
if (jsonArray.length() == 0)
throw new ResourceNotFoundException();
repo = Converter.jsonToRepositoryObject(jsonArray.getJSONObject(0));
return updateRepositoryInfo(repo);
}
@ -437,31 +413,25 @@ public class RepositoryServiceImpl implements RepositoryService {
List<AggregationDetails> aggregationHistory = new ArrayList<>();
try {
long start = System.currentTimeMillis();
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
long end = System.currentTimeMillis();
System.out.println("Aggregations request through rest template took " + (end - start) + "ms");
JSONObject repository = new JSONObject(rs);
if (repository.getJSONArray("datasourceInfo").length() == 0)
return aggregationHistory;
start = System.currentTimeMillis();
aggregationHistory.addAll(Converter.getAggregationHistoryFromJson(repository.getJSONArray("datasourceInfo").getJSONObject(0)));
end = System.currentTimeMillis();
System.out.println("Getting aggregations history from json " + (end - start) + "ms");
return aggregationHistory.size() == 0 ? aggregationHistory : aggregationHistory.stream()
.sorted(Comparator.comparing(AggregationDetails::getDate).reversed())
.limit(size)
.collect(Collectors.toList());
} catch (JSONException e) {
LOGGER.debug("Exception on getRepositoryAggregations", e);
emailUtils.reportException(e);
throw e;
}
long start = System.currentTimeMillis();
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
long end = System.currentTimeMillis();
System.out.println("Aggregations request through rest template took " + (end - start) + "ms");
JSONObject repository = new JSONObject(rs);
if (repository.getJSONArray("datasourceInfo").length() == 0)
return aggregationHistory;
start = System.currentTimeMillis();
aggregationHistory.addAll(Converter.getAggregationHistoryFromJson(repository.getJSONArray("datasourceInfo").getJSONObject(0)));
end = System.currentTimeMillis();
System.out.println("Getting aggregations history from json " + (end - start) + "ms");
return aggregationHistory.size() == 0 ? aggregationHistory : aggregationHistory.stream()
.sorted(Comparator.comparing(AggregationDetails::getDate).reversed())
.limit(size)
.collect(Collectors.toList());
}
@ -474,21 +444,15 @@ public class RepositoryServiceImpl implements RepositoryService {
List<AggregationDetails> aggregationHistory = new ArrayList<>();
Map<String, List<AggregationDetails>> aggregationByYear = new HashMap<>();
try {
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONObject repository = new JSONObject(rs);
if (repository.getJSONArray("datasourceInfo").length() == 0)
return aggregationByYear;
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
JSONObject repository = new JSONObject(rs);
aggregationHistory.addAll(Converter.getAggregationHistoryFromJson(repository.getJSONArray("datasourceInfo").getJSONObject(0)));
return aggregationHistory.size() == 0 ? aggregationByYear : createYearMap(aggregationHistory);
if (repository.getJSONArray("datasourceInfo").length() == 0)
return aggregationByYear;
} catch (JSONException e) {
LOGGER.debug("Exception on getRepositoryAggregations", e);
emailUtils.reportException(e);
throw e;
}
aggregationHistory.addAll(Converter.getAggregationHistoryFromJson(repository.getJSONArray("datasourceInfo").getJSONObject(0)));
return aggregationHistory.size() == 0 ? aggregationByYear : createYearMap(aggregationHistory);
}
private Map<String, List<AggregationDetails>> createYearMap(List<AggregationDetails> aggregationHistory) {
@ -512,17 +476,11 @@ public class RepositoryServiceImpl implements RepositoryService {
RequestFilter requestFilter = new RequestFilter();
requestFilter.setOfficialname(name);
try {
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
List<Repository> repos = Converter.jsonToRepositoryList(new JSONObject(rs));
for (Repository r : repos)
updateRepositoryInfo(r);
return repos;
} catch (Exception e) {
LOGGER.debug("Exception on getRepositoriesByName", e);
emailUtils.reportException(e);
throw e;
}
String rs = restTemplate.postForObject(uriComponents.toUri(), requestFilter, String.class);
List<Repository> repos = Converter.jsonToRepositoryList(new JSONObject(rs));
for (Repository r : repos)
updateRepositoryInfo(r);
return repos;
}
@ -534,20 +492,13 @@ public class RepositoryServiceImpl implements RepositoryService {
.path("/{id}")
.build().expand(id).encode();
try {
String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
return Converter.jsonToRepositoryInterfaceList(new JSONObject(rs));
} catch (Exception e) {
LOGGER.debug("Exception on getRepositoryInterface", e);
emailUtils.reportException(e);
throw e;
}
String rs = restTemplate.getForObject(uriComponents.toUri(), String.class);
return Converter.jsonToRepositoryInterfaceList(new JSONObject(rs));
}
@Override
public Repository addRepository(String datatype,
Repository repository) throws Exception {
public Repository addRepository(String datatype, Repository repository) throws Exception {
LOGGER.debug("storing " + datatype + " repository with id: " + repository.getId());
@ -611,27 +562,23 @@ public class RepositoryServiceImpl implements RepositoryService {
.build()
.encode();
try {
String json_repository = Converter.repositoryObjectToJson(repository);
LOGGER.debug("JSON to add(update) -> " + json_repository);
String json_repository = Converter.repositoryObjectToJson(repository);
LOGGER.debug("JSON to add(update) -> " + json_repository);
HttpEntity<String> httpEntity = new HttpEntity<String>(json_repository, httpHeaders);
ResponseEntity responseEntity = restTemplate.exchange(uriComponents.toUri(), HttpMethod.POST, httpEntity, ResponseEntity.class);
HttpEntity<String> httpEntity = new HttpEntity<String>(json_repository, httpHeaders);
ResponseEntity responseEntity = restTemplate.exchange(uriComponents.toUri(), HttpMethod.POST, httpEntity, ResponseEntity.class);
if (responseEntity.getStatusCode().equals(HttpStatus.OK)) {
if (responseEntity.getStatusCode().equals(HttpStatus.OK)) {
try {
emailUtils.sendUserRegistrationEmail(repository, authentication);
emailUtils.sendAdminRegistrationEmail(repository, authentication);
} else
LOGGER.debug(responseEntity.getBody().toString());
return repository;
} catch (Exception e) {
LOGGER.debug("Exception on updateRepository", e);
emailUtils.reportException(e);
throw e;
}
} catch (Exception e) {
LOGGER.error("Error sending email", e);
}
} else
LOGGER.error("Error storing repository: " + responseEntity.getBody().toString());
return repository;
}
@Override
@ -641,27 +588,25 @@ public class RepositoryServiceImpl implements RepositoryService {
.build()
.encode();
try {
String json_repository = Converter.repositoryObjectToJson(repository);
String json_repository = Converter.repositoryObjectToJson(repository);
LOGGER.debug("JSON to update -> " + json_repository);
LOGGER.debug("JSON to update -> " + json_repository);
HttpEntity<String> httpEntity = new HttpEntity<String>(json_repository, httpHeaders);
ResponseEntity responseEntity = restTemplate.exchange(uriComponents.toUri(), HttpMethod.POST, httpEntity
, ResponseEntity.class);
HttpEntity<String> httpEntity = new HttpEntity<String>(json_repository, httpHeaders);
ResponseEntity responseEntity = restTemplate.exchange(uriComponents.toUri(), HttpMethod.POST, httpEntity
, ResponseEntity.class);
if (responseEntity.getStatusCode().equals(HttpStatus.OK)) {
if (responseEntity.getStatusCode().equals(HttpStatus.OK)) {
try {
emailUtils.sendUserUpdateRepositoryInfoEmail(repository, authentication);
emailUtils.sendAdminUpdateRepositoryInfoEmail(repository, authentication);
} else
LOGGER.debug(responseEntity.getBody().toString());
} catch (Exception e) {
LOGGER.error("Error sending emails: " + e);
}
} else
LOGGER.debug(responseEntity.getBody().toString());
return repository;
} catch (Exception e) {
LOGGER.debug("Exception on updateRepository", e);
emailUtils.reportException(e);
throw e;
}
return repository;
}
private void storeRepository(Repository repository, Authentication authentication) throws Exception {
@ -681,8 +626,12 @@ public class RepositoryServiceImpl implements RepositoryService {
ResponseEntity responseEntity = restTemplate.exchange(uriComponents.toUri(), HttpMethod.POST, httpEntity, ResponseEntity.class);
if (responseEntity.getStatusCode().equals(HttpStatus.OK)) {
emailUtils.sendUserRegistrationEmail(repository, authentication);
emailUtils.sendAdminRegistrationEmail(repository, authentication);
try {
emailUtils.sendUserRegistrationEmail(repository, authentication);
emailUtils.sendAdminRegistrationEmail(repository, authentication);
} catch (Exception e) {
LOGGER.error("Error sending emails: " + e);
}
} else {
LOGGER.debug(responseEntity.getBody().toString());
}
@ -704,32 +653,29 @@ public class RepositoryServiceImpl implements RepositoryService {
String repoId,
String registeredBy,
String comment, RepositoryInterface repositoryInterface) throws Exception {
try {
Repository e = this.getRepositoryById(repoId);
repositoryInterface = createRepositoryInterface(e, repositoryInterface, datatype);
String json_interface = Converter.repositoryInterfaceObjectToJson(e, repositoryInterface);
Repository e = this.getRepositoryById(repoId);
repositoryInterface = createRepositoryInterface(e, repositoryInterface, datatype);
String json_interface = Converter.repositoryInterfaceObjectToJson(e, repositoryInterface);
UriComponents uriComponents = UriComponentsBuilder
.fromHttpUrl(baseAddress + "/ds/api/add/")
.build()
.encode();
UriComponents uriComponents = UriComponentsBuilder
.fromHttpUrl(baseAddress + "/ds/api/add/")
.build()
.encode();
HttpEntity<String> httpEntity = new HttpEntity<>(json_interface, httpHeaders);
HttpEntity<String> httpEntity = new HttpEntity<>(json_interface, httpHeaders);
restTemplate.postForObject(uriComponents.toUri(), httpEntity, String.class);
restTemplate.postForObject(uriComponents.toUri(), httpEntity, String.class);
try {
emailUtils.sendAdminRegisterInterfaceEmail(e, comment, repositoryInterface, SecurityContextHolder.getContext().getAuthentication());
emailUtils.sendUserRegisterInterfaceEmail(e, comment, repositoryInterface, SecurityContextHolder.getContext().getAuthentication());
} catch (Exception ex) {
LOGGER.error("Error sending emails: " + ex);
}
submitInterfaceValidation(e, registeredBy, repositoryInterface, false);
return repositoryInterface;
submitInterfaceValidation(e, registeredBy, repositoryInterface, false);
} catch (Exception e) {
LOGGER.error("Exception on addRepositoryInterface", e);
emailUtils.reportException(e);
throw e;
}
return repositoryInterface;
}
@Override
@ -743,8 +689,12 @@ public class RepositoryServiceImpl implements RepositoryService {
Repository repository = this.getRepositoryById(repoId);
try {
emailUtils.sendAdminUpdateInterfaceEmail(repository, comment, repositoryInterface, SecurityContextHolder.getContext().getAuthentication());
emailUtils.sendUserUpdateInterfaceEmail(repository, comment, repositoryInterface, SecurityContextHolder.getContext().getAuthentication());
try {
emailUtils.sendAdminUpdateInterfaceEmail(repository, comment, repositoryInterface, SecurityContextHolder.getContext().getAuthentication());
emailUtils.sendUserUpdateInterfaceEmail(repository, comment, repositoryInterface, SecurityContextHolder.getContext().getAuthentication());
} catch (Exception e) {
LOGGER.error("Error sending emails: " + e);
}
} catch (Exception e) {
LOGGER.warn("Could not send emails", e);
}
@ -834,15 +784,9 @@ public class RepositoryServiceImpl implements RepositoryService {
.path("/{page}/{size}")
.build().expand(page, size).encode();
try {
RequestFilter requestFilter = new RequestFilter();
requestFilter.setRegisteredby(userEmail);
return Arrays.asList(restTemplate.postForObject(uriComponents.toUri(), requestFilter, String[].class));
} catch (Exception e) {
LOGGER.debug("Exception on addRepositoryInterface", e);
emailUtils.reportException(e);
throw e;
}
RequestFilter requestFilter = new RequestFilter();
requestFilter.setRegisteredby(userEmail);
return Arrays.asList(restTemplate.postForObject(uriComponents.toUri(), requestFilter, String[].class));
}
@Override
@ -959,7 +903,6 @@ public class RepositoryServiceImpl implements RepositoryService {
} catch (Exception e) {
LOGGER.error("Error while getting metrics info for repository: ", e);
emailUtils.reportException(e);
throw new RepositoryServiceException("General error", RepositoryServiceException.ErrorCode.GENERAL_ERROR);
}
}
@ -1016,19 +959,14 @@ public class RepositoryServiceImpl implements RepositoryService {
RestTemplate template = new RestTemplate();
template.getMessageConverters().add(new MappingJackson2HttpMessageConverter());
ResponseEntity<MetricsNumbers> resp;
try {
//communicate with endpoint
resp = template.exchange(
builder.build().encode().toUri(),
HttpMethod.GET,
null,
new ParameterizedTypeReference<MetricsNumbers>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on getMetricsNumbers", e);
emailUtils.reportException(e);
throw e;
}
//communicate with endpoint
resp = template.exchange(
builder.build().encode().toUri(),
HttpMethod.GET,
null,
new ParameterizedTypeReference<MetricsNumbers>() {
});
return resp.getBody();
}

26
src/main/java/eu/dnetlib/repo/manager/service/SushiliteServiceImpl.java
Unescape Escape View File

@ -2,7 +2,6 @@ package eu.dnetlib.repo.manager.service;
import eu.dnetlib.usagestats.sushilite.domain.ReportItem;
import eu.dnetlib.usagestats.sushilite.domain.ReportResponseWrapper;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Value;
import org.springframework.core.ParameterizedTypeReference;
import org.springframework.http.HttpMethod;
@ -10,7 +9,6 @@ import org.springframework.http.ResponseEntity;
import org.springframework.http.converter.json.MappingJackson2HttpMessageConverter;
import org.springframework.security.access.prepost.PreAuthorize;
import org.springframework.stereotype.Service;
import org.springframework.web.client.RestClientException;
import org.springframework.web.client.RestTemplate;
import org.springframework.web.util.UriComponentsBuilder;
@ -24,9 +22,6 @@ public class SushiliteServiceImpl implements SushiliteService {
@Value("${services.repomanager.usagestats.sushiliteEndpoint}")
private String usagestatsSushiliteEndpoint;
@Autowired
private EmailUtils emailUtils;
private static final org.apache.log4j.Logger LOGGER = org.apache.log4j.Logger.getLogger(SushiliteServiceImpl.class);
@ -63,19 +58,14 @@ public class SushiliteServiceImpl implements SushiliteService {
template.getMessageConverters().add(new MappingJackson2HttpMessageConverter());
ResponseEntity<ReportResponseWrapper> resp;
try {
//communicate with endpoint
resp = template.exchange(
builder.build().encode().toUri(),
HttpMethod.GET,
null,
new ParameterizedTypeReference<ReportResponseWrapper>() {
});
} catch (RestClientException e) {
LOGGER.debug("Exception on getReportResults" , e);
emailUtils.reportException(e);
throw e;
}
//communicate with endpoint
resp = template.exchange(
builder.build().encode().toUri(),
HttpMethod.GET,
null,
new ParameterizedTypeReference<ReportResponseWrapper>() {
});
// check remote api's response
System.out.println("sushi responded status " + resp.getStatusCode());

27
src/main/java/eu/dnetlib/repo/manager/service/ValidatorServiceImpl.java
Unescape Escape View File

@ -131,7 +131,11 @@ public class ValidatorServiceImpl implements ValidatorService {
public JobForValidation submitJobForValidation(JobForValidation jobForValidation) throws ValidatorServiceException {
LOGGER.debug("Submit job for validation with id : " + jobForValidation.getDatasourceId());
try {
emailUtils.sendSubmitJobForValidationEmail(SecurityContextHolder.getContext().getAuthentication(),jobForValidation);
try {
emailUtils.sendSubmitJobForValidationEmail(SecurityContextHolder.getContext().getAuthentication(), jobForValidation);
} catch (Exception e) {
LOGGER.error("Error sending email ", e);
}
/////////////////////////////////////////////////////////////////////////////////////////
// FIXME: this is a hack for CRIS Jan Dvorak Validator, should be implemented properly //
/////////////////////////////////////////////////////////////////////////////////////////
@ -144,13 +148,10 @@ public class ValidatorServiceImpl implements ValidatorService {
/////////////////////////////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////////////////////////////
// this.getValidationService().submitValidationJob(jobForValidation);
} catch (ValidatorServiceException e) {
LOGGER.debug("Exception on submitJobForValidation" , e);
emailUtils.reportException(e);
throw e;
} catch (Exception e) {
LOGGER.error(e);
throw new ValidatorServiceException(e);
}
return jobForValidation;
}
@ -200,13 +201,16 @@ public class ValidatorServiceImpl implements ValidatorService {
@Override
public List<String> getSetsOfRepository(String url) {
LOGGER.debug("Getting sets of repository with url : " + url);
List<String> sets = null;
try {
return OaiTools.getSetsOfRepo(url);
sets = OaiTools.getSetsOfRepo(url);
} catch (Exception e) {
LOGGER.debug("Exception on getSetsOfRepository" , e);
emailUtils.reportException(e);
LOGGER.error("Exception on getSetsOfRepository" , e);
}
return null;
return sets;
}
@Override
@ -216,7 +220,6 @@ public class ValidatorServiceImpl implements ValidatorService {
return OaiTools.identifyRepository(url);
} catch (Exception e) {
LOGGER.error("Error while identifying repository with url: " + url, e);
emailUtils.reportException(e);
return false;
}
}
@ -236,7 +239,6 @@ public class ValidatorServiceImpl implements ValidatorService {
return ruleSet;
} catch (Exception e) {
LOGGER.error("Error getting ruleset", e);
emailUtils.reportException(e);
return null;
}
}
@ -284,7 +286,6 @@ public class ValidatorServiceImpl implements ValidatorService {
return interfaceInformation;
} catch (Exception e) {
LOGGER.error("Error getting interface information with url: " + baseUrl, e);
emailUtils.reportException(e);
throw new ValidationServiceException("login.generalError", ValidationServiceException.ErrorCode.GENERAL_ERROR);
}
}

7
src/main/java/eu/dnetlib/repo/manager/service/security/AuthoritiesUpdater.java
Unescape Escape View File

@ -9,7 +9,8 @@ import org.springframework.security.core.context.SecurityContext;
import org.springframework.security.core.context.SecurityContextHolder;
import org.springframework.security.oauth2.common.exceptions.UnauthorizedClientException;
import org.springframework.security.web.context.HttpSessionSecurityContextRepository;
import org.springframework.session.ExpiringSession;
import org.springframework.session.Session;
//import org.springframework.session.ExpiringSession;
import org.springframework.session.FindByIndexNameSessionRepository;
import org.springframework.stereotype.Service;
@ -28,11 +29,11 @@ public class AuthoritiesUpdater extends HttpSessionSecurityContextRepository {
public void update(String email, Collection<? extends GrantedAuthority> authorities) {
if (sessions != null) {
Map<String, ExpiringSession> map = sessions.
Map<String, Session> map = sessions.
findByIndexNameAndIndexValue(FindByIndexNameSessionRepository.PRINCIPAL_NAME_INDEX_NAME, email);
if (map != null) {
logger.debug(map.values().toArray().length);
for (ExpiringSession session : map.values()) {
for (Session session : map.values()) {
logger.debug(session.getId());
if (!session.isExpired()) {
SecurityContext securityContext = session.getAttribute(SPRING_SECURITY_CONTEXT_KEY);

5
src/main/java/eu/dnetlib/repo/manager/service/security/AuthorizationService.java
Unescape Escape View File

@ -21,6 +21,11 @@ public interface AuthorizationService {
*/
boolean isMemberOf(String id);
/**
* @param id repository interface Id to check.
* @return Checks if a user is a member of a repository interface.
*/
boolean isMemberOfInterface(String id);
/**
* Returns a list of admins of the resource.

11
src/main/java/eu/dnetlib/repo/manager/service/security/AuthorizationServiceImpl.java
Unescape Escape View File

@ -53,7 +53,16 @@ public class AuthorizationServiceImpl implements AuthorizationService {
public boolean isMemberOf(String repoId) {
String repoRole = roleMappingService.convertRepoIdToEncodedAuthorityId(repoId);
return SecurityContextHolder.getContext().getAuthentication().getAuthorities()
.parallelStream().anyMatch(authority -> authority.toString().equals(repoRole));
.stream().anyMatch(authority -> authority.toString().equals(repoRole));
}
@Override
public boolean isMemberOfInterface(String interfaceId) {
//TODO blame Konstantinos Spyrou. He forced my hand...
String repoId = interfaceId.split("::")[1] + "::" + interfaceId.split("::")[2];
return isMemberOf(repoId);
}
@Override

190
src/main/resources/application.properties
Unescape Escape View File

@ -6,83 +6,20 @@ container.hostname = estella.athenarc.gr
provider.endpoint=http://estella.athenarc.gr:8480/uoa-repository-manager-service
#container.hostname = validator.mincyt.research-infrastructures.eu
container.port = 8080
#container.context = <yourContext>
# BASIC SETTINGS
services.validator.mode.user = ldap
services.validator.mail.override = false
services.validator.mode.repo = dms
services.validator.baseUrl = http://${container.hostname}:${container.port}/${container.context}
services.validator.dnetWorkflow = true
services.validator.deploy.environment = openaire-beta
#services.validator.deploy.environment = mincyt
services.validator.registration.files.download = true
services.validator.autoRestoreOnStartup = false
services.validator.mode.standalone = false
services.validator.mail.override = false
services.validator.adminEmail = antleb@di.uoa.gr
services.validator.admins.master = antleb@di.uoa.gr
services.validator.admins.secondary = ant.lebesis@gmail.com
services.validator.adminBaseUrl = ../validator-admin
services.validator.webBaseUrl = http://${container.hostname}:${container.port}/validator
services.validator.registrationsReport.email = ant.lebesis@gmail.com
services.repo-manager.repository.testing.mode = false
# EMAIL SETTINGS
services.validator.mail.host = smtp.gmail.com
services.validator.mail.port = 465
services.validator.mail.username = test.openaire@gmail.com
services.validator.mail.password = ^($*@$)*!$
services.validator.mail.authenticate = true
services.validator.mail.mode = ssl
ervices.validator.mail.fromAddress = no-reply@mpagasas.openaire.eu
services.validator.mail.override = false
services.validator.mail.overrideEmail = nikonas@di.uoa.gr
services.validator.mail.specialRecipients = antleb@di.uoa.gr
# VALIDATOR DB
services.validator.db.driverClassName = org.postgresql.Driver
#services.validator.db.url = jdbc:postgresql://194.177.192.119:5432/validator
services.validator.db.url = jdbc:postgresql://88.197.53.70:5432/validator
services.validator.db.username = dnet
services.validator.db.password = dnetPwd
services.repomanager.mail.host = smtp.gmail.com
services.repomanager.mail.port = 465
services.repomanager.mail.username = test.openaire@gmail.com
services.repomanager.mail.password = ^($*@$)*!$
services.repomanager.mail.authenticate = true
services.repomanager.mail.debug = false
services.repomanager.mail.mode = ssl
services.repomanager.mail.from = test.openaire@gmail.com
services.repomanager.mail.replyTo = test.openaire@gmail.com
# IS
#ISLookUpService.url = http://node1.t.openaire.research-infrastructures.eu:8280/is/services/isLookUp
#ISRegistryService.url = http://node1.t.openaire.research-infrastructures.eu:8280/is/services/isRegistry
#ISSNService.url = http://node1.t.openaire.research-infrastructures.eu:8280/is/services/isSN
#ISLookUpService.url = http://skalny.icm.edu.pl:8280/is/services/isLookUp
#ISRegistryService.url = http://skalny.icm.edu.pl:8280/is/services/isRegistry
#ISSNService.url = skalny.icm.edu.pl:8280/is/services/isSN
#ISLookUpService.url = http://node0.t.openaire.research-infrastructures.eu:8080/is/services/isLookUp
#ISRegistryService.url = http://node0.t.openaire.research-infrastructures.eu:8080/is/services/isRegistry
#ISSNService.url = http://node0.t.openaire.research-infrastructures.eu:8080/is/services/isSN
#ISLookUpService.url = http://node6.t.openaire.research-infrastructures.eu:8980/dnet/services/isLookUp
#ISRegistryService.url = http://node6.t.openaire.research-infrastructures.eu:8980/dnet/services/isRegistry
#ISSNService.url = http://node6.t.openaire.research-infrastructures.eu:8980/dnet/services/isSN
#ISLookUpService.url = http://node6.t.openaire.research-infrastructures.eu:8280/is/services/isLookUp
#ISRegistryService.url = http://node6.t.openaire.research-infrastructures.eu:8280/is/services/isRegistry
#ISSNService.url = http://node6.t.openaire.research-infrastructures.eu:8280/is/services/isSN
#ISLookUpService.url = http://aggregator.mincyt.research-infrastructures.eu:8080/is/services/isLookUp
#ISRegistryService.url = http://aggregator.mincyt.research-infrastructures.eu:8080/is/services/isRegistry
#ISSNService.url = http://aggregator.mincyt.research-infrastructures.eu:8080/is/services/isSN
#ISLookUpService.url = http://node0.d.hudl.research-infrastructures.eu:8080/is/services/isLookUp
#ISRegistryService.url = http://node0.d.hudl.research-infrastructures.eu:8080/is/services/isRegistry
#ISSNService.url = http://node0.d.hudl.research-infrastructures.eu:8080/is/is/services/isSN
ISLookUpService.url = https://dev-openaire.d4science.org:443/is/services/isLookUp
ISRegistryService.url = https://dev-openaire.d4science.org:443/is/services/isRegistry
ISSNService.url = https://dev-openaire.d4science.org:443/is/services/isSN
ValidatorService.url=http://estella.athenarc.gr:8080/validator-service/services/validatorWebService
ValidatorService.url=http://88.197.53.69:8080/uoa-validator-service/services/validatorWebService
# LDAP
#services.validator.ldap.address = 88.197.53.113
@ -91,61 +28,56 @@ ValidatorService.url=http://estella.athenarc.gr:8080/validator-service/services/
#services.validator.ldap.username = cn=admin,dc=openaire,dc=eu
#services.validator.ldap.password = serenata
#services.validator.ldap.usersDN = ou=users,dc=openaire,dc=eu
services.users.ldap.address = 194.177.192.119
services.users.ldap.port = 389
services.users.ldap.username = cn=admin,dc=openaire,dc=eu
services.users.ldap.password = serenata
services.users.ldap.usersDN = ou=users,dc=openaire,dc=eu
services.validator.ldap.address = 194.177.192.119
services.validator.ldap.port = 389
services.validator.ldap.username = cn=admin,dc=openaire,dc=eu
services.validator.ldap.password = serenata
services.validator.ldap.usersDN = ou=users,dc=openaire,dc=eu
#
#services.users.ldap.address = 194.177.192.119
#services.users.ldap.port = 389
#services.users.ldap.username = cn=admin,dc=openaire,dc=eu
#services.users.ldap.password = serenata
#services.users.ldap.usersDN = ou=users,dc=openaire,dc=eu
#
#services.validator.ldap.address = 194.177.192.119
#services.validator.ldap.port = 389
#services.validator.ldap.username = cn=admin,dc=openaire,dc=eu
#services.validator.ldap.password = serenata
#services.validator.ldap.usersDN = ou=users,dc=openaire,dc=eu
#AAI-REDIS
redis.host = estella.athenarc.gr
redis.host = localhost
redis.port = 6379
redis.password = redis123
oidc.dev.home = http://localhost:8480/uoa-repository-manager-service/openid_connect_login
webapp.dev.front = http://localhost:4200/dashboard
repomanager.db.driverClassName=org.postgresql.Driver
repomanager.db.url=jdbc:postgresql://194.177.192.119:5432/repomanager
repomanager.db.username=dnet
repomanager.db.password=dnetPwd
infrastructure.name=integration
transport.soap.baseAddress=http://${container.hostname}:${container.port}/${container.context}
transport.soap.force.local.address=false
services.validator.mail.host=smtp.gmail.com
services.validator.mail.port=465
services.validator.mail.fromAddress=no-reply@openaire.eu
services.validator.mail.replyToAddress=no-reply@openaire.eu
services.validator.mail.username=test.openaire@gmail.com
services.validator.mail.password=^($*@$)*!$
services.validator.mail.authenticate=true
services.validator.mail.override=false
services.validator.mail.logonly=false
services.validator.mail.mode=ssl
services.validator.mail.debug=false
services.validator.mail.overrideEmail=antleb@di.uoa.gr
services.validator.mail.specialRecipients=antleb@di.uoa.gr
services.validator.repoRegistration.override=antleb@di.uoa.gr
oidc.issuer=https://aai.openaire.eu/oidc/
oidc.id=767422b9-5461-4807-a80a-f9a2072d3a7d
oidc.secret=AMQtGlbTXNjwjhF0st28LmM6V0XypMdaVS7tJmGuYFlmH36iIv4t7tVqYuLYrNPkhnZ_GPUJvhymBhFupdgb6aU
redis.password = 2106875370
oidc.dev.home = http://88.197.53.69/api/openid_connect_login
webapp.dev.front = http://88.197.53.69/join
services.repomanager.db.driverClassName=org.postgresql.Driver
services.repomanager.db.url=jdbc:postgresql://localhost:5432/repomanager
services.repomanager.db.username=dnet
services.repomanager.db.password=dnetPwd
#infrastructure.name=integration
#transport.soap.baseAddress=http://${container.hostname}:${container.port}/${container.context}
#transport.soap.force.local.address=false
#services.validator.mail.host=smtp.gmail.com
#services.validator.mail.port=465
#services.validator.mail.fromAddress=no-reply@openaire.eu
#services.validator.mail.replyToAddress=no-reply@openaire.eu
#services.validator.mail.username=test.openaire@gmail.com
#services.validator.mail.password=^($*@$)*!$
#services.validator.mail.authenticate=true
#services.validator.mail.override=false
#services.validator.mail.logonly=false
#services.validator.mail.mode=ssl
#services.validator.mail.debug=false
#services.validator.mail.overrideEmail=antleb@di.uoa.gr
#services.validator.mail.specialRecipients=antleb@di.uoa.gr
#services.validator.repoRegistration.override=antleb@di.uoa.gr
search.api.baseAddress=https://beta.services.openaire.eu/search/v2/api
search.api.usagestats=https://services.openaire.eu/usagestats
search.api.usageEvents=http://beta.lbs.openaire.eu:8080/ajax/summary
api.baseAddress=http://beta.services.openaire.eu/openaire
services.repo-manager.baseUrl=http://${container.hostname}:${container.port}/${container.context}
services.repo-manager.adminEmail=antleb@di.uoa.gr
services.repo-manager.repository.testing.mode=false
services.repo-manager.deploy.environment=development
services.repomanager.baseUrl=http://${container.hostname}:${container.port}/${container.context}
services.repomanager.usageStatisticsDiagramsBaseURL=https://beta.openaire.eu/stats3/
services.repomanager.usageStatisticsNumbersBaseURL=https://beta.services.openaire.eu/usagestats/datasources/
services.repomanager.usagestats.adminEmail=antleb@di.uoa.gr
@ -153,15 +85,29 @@ services.repomanager.usagestats.sushiliteEndpoint=http://beta.services.openaire.
services.repomanager.analyticsURL=https://analytics.openaire.eu/addsite.php?
aai.mode=develop
#uoa-repository-manager-service
#oidc.dev.home=http://88.197.53.69:8080/uoa-repository-manager-service/openid_connect_login
#webapp.dev.front=http://88.197.53.69/landing
services.repo-manager.adminEmail=antleb@di.uoa.gr
services.repomanager.usagestats.adminEmail=antleb@di.uoa.gr
services.provide.adminEmail=antleb@di.uoa.gr
services.repomanager.provide.adminEmail=antleb@di.uoa.gr
validator.results.url=https://beta.provide.openaire.eu/compatibility/browseHistory/
topic_types.url=https://beta.services.openaire.eu/provision/mvc/vocabularies/dnet:topic_types.json
services.broker.url=http://broker1-dev-dnet.d4science.org
services.broker.port=8080
services.broker.api=api/
services.broker.openaire=openaireBroker
oidc.url.base=https://aai.openaire.eu
oidc.issuer=${oidc.url.base}/oidc/
aai.registry.url=${oidc.url.base}/registry/
aai.registry.coid=2
aai.registry.production=false
aai.registry.authentication.username=provide_openaire
aai.registry.authentication.password=u8WfYv2R^f#y7G98
oidc.id=767422b9-5461-4807-a80a-f9a2072d3a7d
oidc.secret=AMQtGlbTXNjwjhF0st28LmM6V0XypMdaVS7tJmGuYFlmH36iIv4t7tVqYuLYrNPkhnZ_GPUJvhymBhFupdgb6aU

16
src/main/resources/log4j2.xml
Unescape Escape View File

@ -0,0 +1,16 @@
<?xml version="1.0" encoding="UTF-8"?>
<Configuration status="DEBUG">
<Appenders>
<Console name="LogToConsole" target="SYSTEM_OUT">
<PatternLayout pattern="%d{HH:mm:ss.SSS} [%t] %-5level %logger{36} - %msg%n"/>
</Console>
</Appenders>
<Loggers>
<Logger name="org.springframework.boot" level="error" additivity="false">
<AppenderRef ref="LogToConsole"/>
</Logger>
<Root level="error">
<AppenderRef ref="LogToConsole"/>
</Root>
</Loggers>
</Configuration>

15
src/main/webapp/WEB-INF/applicationContext.xml
Unescape Escape View File

@ -21,21 +21,6 @@
<!--<import resource="classpath*:/gr/uoa/di/driver/app/springContext-registrator.xml"/>-->
<bean id="maillib" class="eu.dnetlib.utils.MailLibrary" init-method="init">
<property name="mailhost" value="${services.validator.mail.host}"/>
<property name="smtpPort" value="${services.validator.mail.port}"/>
<property name="authenticate" value="${services.validator.mail.authenticate}"/>
<property name="username" value="${services.validator.mail.username}"/>
<property name="password" value="${services.validator.mail.password}"/>
<property name="from" value="${services.validator.mail.fromAddress}"/>
<property name="replyTo" value="${services.validator.mail.replyToAddress}"/>
<property name="mode" value="${services.validator.mail.mode}"/>
<property name="debug" value="${services.validator.mail.debug}"/>
</bean>
<bean class="eu.dnetlib.repo.manager.config.CascadingPropertyLoader"
id="propertyLoader">
<property name="order" value="2"/>

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