80 lines
1.9 KiB
Docker
80 lines
1.9 KiB
Docker
FROM sharelatex/sharelatex:latest
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# MAINTAINER Andrea Dell'Amico <andrea.dellamico@isti.cnr.it>
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RUN apt-get update && apt-get dist-upgrade -y
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RUN apt-get update && apt-get install -y \
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subversion \
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git \
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texlive texlive-full \
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gdal-bin \
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libgdal-dev \
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libgeos-dev \
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libspatialite-dev \
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proj-bin \
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proj-data \
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libproj-dev \
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libcurl4-openssl-dev \
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libnetcdf-dev \
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netcdf-bin \
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mono-runtime \
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libmono-microsoft-visualbasic10.0-cil \
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'libmono-2.0-1' \
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'libmono-corlib2.0-cil' \
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gsl-bin \
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libgsl0-dev \
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mesa-common-dev \
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libglu1-mesa-dev \
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postgis \
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postgresql-client
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RUN apt-get update && apt-get install -y \
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r-recommended \
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r-base \
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r-base-dev \
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r-base-html \
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r-base-core \
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r-doc-html \
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r-cran-boot \
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r-cran-cluster \
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r-cran-foreign \
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r-cran-kernsmooth \
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r-cran-lattice \
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r-cran-mgcv \
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r-cran-nlme \
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r-cran-rpart \
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r-cran-survival \
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r-cran-mass \
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r-cran-class \
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r-cran-nnet \
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r-cran-spatial \
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r-cran-codetools \
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r-cran-matrix \
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jags
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# copy the LatexMk file needed by knitr
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COPY LatexMk /etc/LatexMk
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RUN mkdir -p /srv/d4science
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RUN cd /srv/d4science ; svn checkout http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/RConfiguration/RStudioConfiguration
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RUN rm -f /etc/R/Rprofile.site && ln -s /srv/d4science/RStudioConfiguration/.Rprofile /etc/R/Rprofile.site
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RUN mkdir -p /srv/r_updater
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RUN cd /srv/r_updater ; svn checkout http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/RConfiguration/RPackagesManagement
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RUN cp install-r-packages.cron /etc/cron.d
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RUN cp upgrade-r-packages.cron /etc/cron.d
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RUN cp update-rprofile.cron /etc/cron.d
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RUN cp update_r_packages /usr/local/bin/update_r_packages ; chmod 755 /usr/local/bin/update_r_packages
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EXPOSE 80
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WORKDIR /
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ENTRYPOINT ["/sbin/my_init"]
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