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aggregation section #2

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# EMBL-EBIs Protein Data Bank in Europe
This section describes the mapping implemented for [EMBL-EBIs Protein Data Bank in Europe](https://www.ebi.ac.uk/).
The Europe PMC RESTful Web Service gives the [datalinks API](https://europepmc.org/RestfulWebService#!/Europe32PMC32Articles32RESTful32API)to retrieve data-literature links in Scholix format .
## how data is collected
Starting from the Pubmed collection, we exploit this API to get all the related bioentities related to a Publication with a specific PubMed identifier.
Following this request: `https://www.ebi.ac.uk/europepmc/webservices/rest/MED/$PMID/datalinks?format=json` we store for each pubmedID the links related.
## Mapping
schatz commented 2022-11-08 12:58:47 +01:00
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I am not sure if the full response from EMBL is required here.

I am not sure if the full response from EMBL is required here.
The table below describes the mapping from the EBI links records to the OpenAIRE Graph dump format.
| *OpenAIRE Result field path* | PubMed record field xpath | Notes |
|--------------------------------|--------------------------------|---------------------------------------------------------------------------------------------------------------------------------------------------------------|