aggregation section #2
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@ -69,23 +69,11 @@ The table below describes the mapping from the XML baseline records to the OpenA
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### Relation Mapping
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<<<<<<< HEAD
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| OpenAIRE Relation Semantic and inverse | Datacite record JSON path | Source/Tartget type | #Notes |
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|-------------------------------------------|-------------------------------|-------------------------------|---------|
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| `isProducedBy` |`attributes\fundingReferences` | `Result/Project`| we must identifi if match this pattern `(info:eu-repo/grantagreement/ec/h2020/)(\d{6})(.*)`|
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| `IsProvidedBy` | | `Result/DataSource` | Datasource is always Datacite|
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| `IsHostedBy` | `\attributes\relationships\client\id` | `Result/DataSource` |we defined a curated map clientId/Datasource if we found a match we create an _hostedBy Relation_ |
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| | `\attribute\relatedIdentifiers` | result/result | we create relationships whenever the pid of the target is resolved on the Research Graph |
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=======
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| OpenAIRE Relation Semantic and inverse | Datacite record JSON path | Source/Tartget type | #Notes |
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|----------------------------------------|---------------------------------------|----------------------|---------------------------------------------------------------------------------------------------|
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| `isProducedBy` | `attributes\fundingReferences` | `Result/Project` | we must identifi if match this pattern `(info:eu-repo/grantagreement/ec/h2020/)(\d{6})(.*)` |
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| `IsProvidedBy` | | `Result/DataSource` | Datasource is always Datacite |
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| `IsHostedBy` | `\attributes\relationships\client\id` | `Result/DataSource` | we defined a curated map clientId/Datasource if we found a match we create an _hostedBy Relation_ |
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### Relation Resolution
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>>>>>>> 92baad5acb3ecfb774510b48fee6aeeba92738df
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@ -402,7 +402,26 @@ curl -s "https://www.ebi.ac.uk/europepmc/webservices/rest/MED/33024307/datalinks
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## Mapping
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The table below describes the mapping from the EBI links records to the OpenAIRE Graph dump format.
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We filter all the target links with pid type **ena**, **pdb** or **uniprot**
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For each target we construct a Bioentity with the following mapping
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schatz
commented
This is empty. Remove it or add content. Also remove italics from the table header. This is empty. Remove it or add content. Also remove italics from the table header.
claudio.atzori
commented
Fixed Fixed
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| *OpenAIRE Result field path* | PubMed record field xpath | Notes |
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|--------------------------------|--------------------------------|---------------------------------------------------------------------------------------------------------------------------------------------------------------|
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| *OpenAIRE Result field path* | EBI record field xpath | Notes |
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|--------------------------------|--------------------------------|---------------------------------------------------------------------------------------------------------------------------------------------------------------|
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| `id` | `target/identifier/ID` and `target/identifier/IDScheme` | id in the form `SCHEMA_________::md5(pid)`|
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| `pid` | `target/identifier/ID` and `target/identifier/IDScheme` | `classid = classname = schema`|
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| `publicationdate` | `target/PublicationDate` | clean and normalize the format of the date to be `YYYY-mm-dd` |
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| `maintitle` | `target/Title` | |
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| **Instance Mapping** | | |
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| `instance.type` | | `Bioentity` |
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|`type` | | `Dataset` |
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| `instance.pid` |`target/identifier/ID` and `target/identifier/IDScheme` | `classid = classname = schema` |
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| `instance.url` | `target/identifier/IDURL` | Copy the value as it is |
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| `instance.publicationdate` | `//PubmedPubDate` | clean and normalize the format of the date to be YYYY-mm-dd
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### Relation Mapping
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| OpenAIRE Relation Semantic and inverse | Datacite record JSON path | Source/Tartget type | #Notes |
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|-------------------------------------------|-------------------------------|-------------------------------|---------|
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| `IsRelatedTo` | | result/result | we create relationships between the BioEntity and the pubmed publication |
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