dnet-hadoop/dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/wf/subworkflows/entitytoorganizationfromsemrel/oozie_app/workflow.xml

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XML

<workflow-app name="affiliation_from_semrel_propagation" xmlns="uri:oozie:workflow:0.5">
<parameters>
<property>
<name>sourcePath</name>
<description>the source path</description>
</property>
<property>
<name>startFrom</name>
<value>undelete</value>
</property>
</parameters>
<global>
<job-tracker>${jobTracker}</job-tracker>
<name-node>${nameNode}</name-node>
<configuration>
<property>
<name>oozie.action.sharelib.for.spark</name>
<value>${oozieActionShareLibForSpark2}</value>
</property>
</configuration>
</global>
<start to="startFrom"/>
<decision name="startFrom">
<switch>
<case to="prepare_info">${wf:conf('startFrom') eq 'undelete'}</case>
<default to="reset_outputpath"/>
</switch>
</decision>
<kill name="Kill">
<message>Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]</message>
</kill>
<action name="reset_outputpath">
<fs>
<delete path="${workingDir}"/>
<mkdir path="${workingDir}"/>
</fs>
<ok to="prepare_info"/>
<error to="Kill"/>
</action>
<action name="prepare_info">
<spark xmlns="uri:oozie:spark-action:0.2">
<master>yarn</master>
<mode>cluster</mode>
<name>PrepareResultProjectOrganizationAssociation</name>
<class>eu.dnetlib.dhp.entitytoorganizationfromsemrel.PrepareInfo</class>
<jar>dhp-enrichment-${projectVersion}.jar</jar>
<spark-opts>
--executor-cores=${sparkExecutorCores}
--executor-memory=${sparkExecutorMemory}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
</spark-opts>
<arg>--graphPath</arg><arg>${sourcePath}</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg>
<arg>--leavesPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/leavesPath</arg>
<arg>--childParentPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/childParentPath</arg>
<arg>--resultOrgPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/resultOrgPath</arg>
<arg>--projectOrganizationPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/projectOrganizationPath</arg>
<arg>--relationPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/relation</arg>
</spark>
<ok to="apply_resulttoorganization_propagation"/>
<error to="Kill"/>
</action>
<action name="apply_resulttoorganization_propagation">
<spark xmlns="uri:oozie:spark-action:0.2">
<master>yarn</master>
<mode>cluster</mode>
<name>entityToOrganizationFromSemRel</name>
<class>eu.dnetlib.dhp.entitytoorganizationfromsemrel.SparkEntityToOrganizationFromSemRel</class>
<jar>dhp-enrichment-${projectVersion}.jar</jar>
<spark-opts>
--executor-cores=${sparkExecutorCores}
--executor-memory=${sparkExecutorMemory}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.dynamicAllocation.enabled=true
--conf spark.dynamicAllocation.maxExecutors=${spark2MaxExecutors}
--conf spark.sql.shuffle.partitions=3840
</spark-opts>
<arg>--relationPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/relation</arg>
<arg>--outputPath</arg><arg>${sourcePath}/relation</arg>
<arg>--leavesPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/leavesPath</arg>
<arg>--childParentPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/childParentPath</arg>
<arg>--resultOrgPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/resultOrgPath</arg>
<arg>--projectOrganizationPath</arg><arg>${workingDir}/entitiesSemanticRelation/preparedInfo/projectOrganizationPath</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg>
<arg>--workingDir</arg><arg>${workingDir}/entitiesSemanticRelation/working</arg>
<arg>--iterations</arg><arg>${iterations}</arg>
</spark>
<ok to="End"/>
<error to="Kill"/>
</action>
<end name="End"/>
</workflow-app>