dnet-hadoop/dhp-workflows/dhp-doiboost/src/main/java/eu/dnetlib/doiboost/crossref/ExtractCrossrefRecords.java

43 lines
1.4 KiB
Java

package eu.dnetlib.doiboost.crossref;
import static eu.dnetlib.dhp.common.collection.DecompressTarGz.doExtract;
import java.net.URI;
import org.apache.commons.io.IOUtils;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.mortbay.log.Log;
import eu.dnetlib.dhp.application.ArgumentApplicationParser;
public class ExtractCrossrefRecords {
public static void main(String[] args) throws Exception {
final ArgumentApplicationParser parser = new ArgumentApplicationParser(
IOUtils
.toString(
ExtractCrossrefRecords.class
.getResourceAsStream(
"/eu/dnetlib/dhp/doiboost/crossref_dump_reader/crossref_dump_reader.json")));
parser.parseArgument(args);
final String hdfsServerUri = parser.get("hdfsServerUri");
final String workingPath = hdfsServerUri.concat(parser.get("workingPath"));
final String outputPath = parser.get("outputPath");
final String crossrefFileNameTarGz = parser.get("crossrefFileNameTarGz");
Configuration conf = new Configuration();
conf.set("fs.defaultFS", workingPath);
conf.set("fs.hdfs.impl", org.apache.hadoop.hdfs.DistributedFileSystem.class.getName());
conf.set("fs.file.impl", org.apache.hadoop.fs.LocalFileSystem.class.getName());
FileSystem fs = FileSystem.get(URI.create(workingPath), conf);
doExtract(fs, outputPath, workingPath.concat("/").concat(crossrefFileNameTarGz));
Log.info("Crossref dump reading completed");
}
}