dnet-hadoop/dhp-workflows/dhp-graph-provision-scholex.../src/main/java/eu/dnetlib/dhp/export/zenodo/MakeTar.java

113 lines
3.4 KiB
Java

package eu.dnetlib.dhp.export.zenodo;
import java.io.*;
import org.apache.commons.compress.archivers.tar.TarArchiveEntry;
import org.apache.commons.compress.archivers.tar.TarArchiveOutputStream;
import org.apache.commons.io.IOUtils;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.*;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import eu.dnetlib.dhp.application.ArgumentApplicationParser;
import eu.dnetlib.dhp.common.MakeTarArchive;
public class MakeTar implements Serializable {
private static final Logger log = LoggerFactory.getLogger(MakeTar.class);
public static void main(String[] args) throws Exception {
String jsonConfiguration = IOUtils
.toString(
MakeTar.class
.getResourceAsStream(
"/eu/dnetlib/dhp/export/input_maketar_parameters.json"));
final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
parser.parseArgument(args);
final String outputPath = parser.get("targetPath");
log.info("hdfsPath: {}", outputPath);
final String hdfsNameNode = parser.get("nameNode");
log.info("nameNode: {}", hdfsNameNode);
final String inputPath = parser.get("sourcePath");
log.info("input path : {}", inputPath);
Configuration conf = new Configuration();
conf.set("fs.defaultFS", hdfsNameNode);
FileSystem fileSystem = FileSystem.get(conf);
MakeTarArchive.tarMaxSize(fileSystem, inputPath, outputPath, "scholix_dump", 25);
}
// public static void makeTArArchive(FileSystem fileSystem, String inputPath, String outputPath) throws IOException {
//
// RemoteIterator<LocatedFileStatus> dir_iterator = fileSystem.listLocatedStatus(new Path(inputPath));
//
// while (dir_iterator.hasNext()) {
// LocatedFileStatus fileStatus = dir_iterator.next();
//
// Path p = fileStatus.getPath();
// String p_string = p.toString();
// String entity = p_string.substring(p_string.lastIndexOf("/") + 1);
//
// write(fileSystem, p_string, outputPath + "/" + entity + ".tar", entity);
// }
//
// }
//
// private static void write(FileSystem fileSystem, String inputPath, String outputPath, String dir_name)
// throws IOException {
//
// Path hdfsWritePath = new Path(outputPath);
// FSDataOutputStream fsDataOutputStream = null;
// if (fileSystem.exists(hdfsWritePath)) {
// fileSystem.delete(hdfsWritePath, true);
//
// }
// fsDataOutputStream = fileSystem.create(hdfsWritePath);
//
// TarArchiveOutputStream ar = new TarArchiveOutputStream(fsDataOutputStream.getWrappedStream());
//
// RemoteIterator<LocatedFileStatus> fileStatusListIterator = fileSystem
// .listFiles(
// new Path(inputPath), true);
//
// while (fileStatusListIterator.hasNext()) {
// LocatedFileStatus fileStatus = fileStatusListIterator.next();
//
// Path p = fileStatus.getPath();
// String p_string = p.toString();
// if (!p_string.endsWith("_SUCCESS")) {
// String name = p_string.substring(p_string.lastIndexOf("/") + 1);
// TarArchiveEntry entry = new TarArchiveEntry(dir_name + "/" + name + ".json.gz");
// entry.setSize(fileStatus.getLen());
// ar.putArchiveEntry(entry);
//
// InputStream is = fileSystem.open(fileStatus.getPath());
//
// BufferedInputStream bis = new BufferedInputStream(is);
//
// int count;
// byte data[] = new byte[1024];
// while ((count = bis.read(data, 0, data.length)) != -1) {
// ar.write(data, 0, count);
// }
// bis.close();
// ar.closeArchiveEntry();
//
// }
//
// }
//
// ar.close();
// }
}