dnet-hadoop/dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/subjectpropagation/oozie_app/workflow.xml

<workflow-app name="subject_to_result_propagation" xmlns="uri:oozie:workflow:0.5">
    <parameters>
        <property>
            <name>sourcePath</name>
            <description>the source path</description>
        </property>
        <property>
            <name>subjectlist</name>
            <value>fos;sdg</value>
            <description>the list of subject classid to propagate (split by ;)</description>
        </property>
        <property>
            <name>allowedsemrels</name>
            <value>IsSupplementedBy;IsSupplementTo;IsPreviousVersionOf;IsNewVersionOf;IsIdenticalTo;Obsoletes;IsObsoletedBy;IsVersionOf</value>
            <description>the allowed semantics </description>
        </property>
       <property>
           <name>outputPath</name>
           <description>the output path</description>
       </property>
    </parameters>

    <global>
        <job-tracker>${jobTracker}</job-tracker>
        <name-node>${nameNode}</name-node>
        <configuration>
            <property>
                <name>oozie.action.sharelib.for.spark</name>
                <value>${oozieActionShareLibForSpark2}</value>
            </property>
        </configuration>
    </global>

    <start to="reset_outputpath"/>

    <kill name="Kill">
        <message>Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]</message>
    </kill>

    <action name="reset_outputpath">
        <fs>
            <delete path="${outputPath}"/>
            <mkdir path="${outputPath}"/>
        </fs>
        <ok to="prepare_subject_propagation"/>
        <error to="Kill"/>
    </action>

    <fork name="prepare_subject_propagation">
        <path start="prepare_subject_propagation_publication"/>
        <path start="prepare_subject_propagation_dataset"/>
        <path start="prepare_subject_propagation_software"/>
        <path start="prepare_subject_propagation_orp"/>
    </fork>

    <action name="prepare_subject_propagation_publication">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>PrepareSubjectResultsAssociation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.PrepareResultResultStep1</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--allowedsemrels</arg><arg>${allowedsemrels}</arg>
            <arg>--subjectlist</arg><arg>${subjectlist}</arg>
            <arg>--resultType</arg><arg>publication</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
            <arg>--outputPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_prepare"/>
        <error to="Kill"/>
    </action>

    <action name="prepare_subject_propagation_dataset">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>PrepareSubjectResultsAssociation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.PrepareResultResultStep1</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--allowedsemrels</arg><arg>${allowedsemrels}</arg>
            <arg>--subjectlist</arg><arg>${subjectlist}</arg>
            <arg>--resultType</arg><arg>dataset</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
            <arg>--outputPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_prepare"/>
        <error to="Kill"/>
    </action>

    <action name="prepare_subject_propagation_software">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>PrepareSubjectResultsAssociation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.PrepareResultResultStep1</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--allowedsemrels</arg><arg>${allowedsemrels}</arg>
            <arg>--subjectlist</arg><arg>${subjectlist}</arg>
            <arg>--resultType</arg><arg>software</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
            <arg>--outputPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_prepare"/>
        <error to="Kill"/>
    </action>

    <action name="prepare_subject_propagation_orp">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>PrepareSubjectResultsAssociation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.PrepareResultResultStep1</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--allowedsemrels</arg><arg>${allowedsemrels}</arg>
            <arg>--subjectlist</arg><arg>${subjectlist}</arg>
            <arg>--resultType</arg><arg>otherresearchproduct</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
            <arg>--outputPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_prepare"/>
        <error to="Kill"/>
    </action>

    <join name="wait_prepare" to="propagate_subject"/>

    <fork name="propagate_subject">
        <path start="propagate_subject_publication"/>
        <path start="propagate_subject_dataset"/>
        <path start="propagate_subject_software"/>
        <path start="propagate_subject_otherresearchproduct"/>
    </fork>

    <action name="propagate_subject_publication">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>SubjectToResultPropagation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.SparkSubjectPropagationStep2</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=8G
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
                --conf spark.dynamicAllocation.enabled=true
                --conf spark.dynamicAllocation.maxExecutors=${spark2MaxExecutors}
                --conf spark.sql.shuffle.partitions=3840
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--outputPath</arg><arg>${outputPath}</arg>
            <arg>--workingPath</arg><arg>${workingDir}/working</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
            <arg>--resultType</arg><arg>publication</arg>
            <arg>--preparedPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_propagation"/>
        <error to="Kill"/>
    </action>

    <action name="propagate_subject_otherresearchproduct">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>SubjectToResultPropagation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.SparkSubjectPropagationStep2</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
                --conf spark.dynamicAllocation.enabled=true
                --conf spark.dynamicAllocation.maxExecutors=${spark2MaxExecutors}
                --conf spark.sql.shuffle.partitions=3840
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--outputPath</arg><arg>${outputPath}</arg>
            <arg>--workingPath</arg><arg>${workingDir}/working</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
            <arg>--resultType</arg><arg>otherresearchproduct</arg>
            <arg>--preparedPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_propagation"/>
        <error to="Kill"/>
    </action>

    <action name="propagate_subject_dataset">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>SubjectToResultPropagation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.SparkSubjectPropagationStep2</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
                --conf spark.dynamicAllocation.enabled=true
                --conf spark.dynamicAllocation.maxExecutors=${spark2MaxExecutors}
                --conf spark.sql.shuffle.partitions=3840
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--outputPath</arg><arg>${outputPath}</arg>
            <arg>--workingPath</arg><arg>${workingDir}/working</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
            <arg>--resultType</arg><arg>dataset</arg>
            <arg>--preparedPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_propagation"/>
        <error to="Kill"/>
    </action>

    <action name="propagate_subject_software">
        <spark xmlns="uri:oozie:spark-action:0.2">
            <master>yarn</master>
            <mode>cluster</mode>
            <name>SubjectToResultPropagation</name>
            <class>eu.dnetlib.dhp.subjecttoresultfromsemrel.SparkSubjectPropagationStep2</class>
            <jar>dhp-enrichment-${projectVersion}.jar</jar>
            <spark-opts>
                --executor-cores=${sparkExecutorCores}
                --executor-memory=${sparkExecutorMemory}
                --driver-memory=${sparkDriverMemory}
                --conf spark.extraListeners=${spark2ExtraListeners}
                --conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
                --conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
                --conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
                --conf spark.dynamicAllocation.enabled=true
                --conf spark.dynamicAllocation.maxExecutors=${spark2MaxExecutors}
                --conf spark.sql.shuffle.partitions=3840
            </spark-opts>
            <arg>--sourcePath</arg><arg>${sourcePath}</arg>
            <arg>--outputPath</arg><arg>${outputPath}</arg>
            <arg>--workingPath</arg><arg>${workingDir}/working</arg>
            <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
            <arg>--resultType</arg><arg>software</arg>
            <arg>--preparedPath</arg><arg>${workingDir}/preparedInfo</arg>
        </spark>
        <ok to="wait_propagation"/>
        <error to="Kill"/>
    </action>

    <join name="wait_propagation" to="End"/>

    <end name="End"/>

</workflow-app>