dnet-hadoop/dhp-workflows/dhp-aggregation/src/main/java/eu/dnetlib/dhp/collection/plugin/file/AbstractSplittedRecordPlugi...

77 lines
2.6 KiB
Java

package eu.dnetlib.dhp.collection.plugin.file;
import java.io.BufferedInputStream;
import java.io.IOException;
import java.util.Iterator;
import java.util.Optional;
import java.util.Spliterator;
import java.util.Spliterators;
import java.util.stream.Stream;
import java.util.stream.StreamSupport;
import eu.dnetlib.dhp.collection.ApiDescriptor;
import eu.dnetlib.dhp.collection.plugin.CollectorPlugin;
import eu.dnetlib.dhp.collection.plugin.utils.XMLIterator;
import eu.dnetlib.dhp.common.aggregation.AggregatorReport;
import eu.dnetlib.dhp.common.collection.CollectorException;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
public abstract class AbstractSplittedRecordPlugin implements CollectorPlugin {
private static final Logger log = LoggerFactory.getLogger(AbstractSplittedRecordPlugin.class);
public static final String SPLIT_ON_ELEMENT = "splitOnElement";
private final FileSystem fileSystem;
public AbstractSplittedRecordPlugin(FileSystem fileSystem) {
this.fileSystem = fileSystem;
}
@Override
public Stream<String> collect(ApiDescriptor api, AggregatorReport report) throws CollectorException {
// get path to file
final Path filePath = Optional
.ofNullable(api.getBaseUrl())
.map(Path::new)
.orElseThrow( () -> new CollectorException("missing baseUrl"));
log.info("baseUrl: {}", filePath);
// check that path to file exists
try {
if (!fileSystem.exists(filePath)) {
throw new CollectorException("path does not exist: " + filePath);
}
} catch (IOException e) {
throw new CollectorException(e);
}
// get split element
final String splitOnElement = Optional
.ofNullable(api.getParams().get(SPLIT_ON_ELEMENT))
.orElseThrow(() -> new CollectorException(String.format("missing parameter '%s', required by the AbstractSplittedRecordPlugin", SPLIT_ON_ELEMENT)));
log.info("splitOnElement: {}", splitOnElement);
final BufferedInputStream bis = getBufferedInputStream(filePath);
Iterator<String> xmlIterator = new XMLIterator(splitOnElement, bis);
return StreamSupport.stream(
Spliterators.spliteratorUnknownSize(xmlIterator, Spliterator.ORDERED),
false
);
}
abstract protected BufferedInputStream getBufferedInputStream(final Path filePath) throws CollectorException;
public FileSystem getFileSystem() {
return fileSystem;
}
}