crossrefInputPath
the path where to find the inferred affiliation relations from Crossref
pubmedInputPath
the path where to find the inferred affiliation relations from Pubmed
openapcInputPath
the path where to find the inferred affiliation relations from OpenAPC
outputPath
the path where to store the actionset
sparkDriverMemory
memory for driver process
sparkExecutorMemory
memory for individual executor
sparkExecutorCores
number of cores used by single executor
oozieActionShareLibForSpark2
oozie action sharelib for spark 2.*
spark2ExtraListeners
com.cloudera.spark.lineage.NavigatorAppListener
spark 2.* extra listeners classname
spark2SqlQueryExecutionListeners
com.cloudera.spark.lineage.NavigatorQueryListener
spark 2.* sql query execution listeners classname
spark2YarnHistoryServerAddress
spark 2.* yarn history server address
spark2EventLogDir
spark 2.* event log dir location
${jobTracker}
${nameNode}
mapreduce.job.queuename
${queueName}
oozie.launcher.mapred.job.queue.name
${oozieLauncherQueueName}
oozie.action.sharelib.for.spark
${oozieActionShareLibForSpark2}
Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}]
yarn
cluster
Produces the atomic action with the inferred by BIP! affiliation relations (from Crossref and Pubmed)
eu.dnetlib.dhp.actionmanager.bipaffiliations.PrepareAffiliationRelations
dhp-aggregation-${projectVersion}.jar
--executor-memory=${sparkExecutorMemory}
--executor-cores=${sparkExecutorCores}
--driver-memory=${sparkDriverMemory}
--conf spark.extraListeners=${spark2ExtraListeners}
--conf spark.sql.queryExecutionListeners=${spark2SqlQueryExecutionListeners}
--conf spark.yarn.historyServer.address=${spark2YarnHistoryServerAddress}
--conf spark.eventLog.dir=${nameNode}${spark2EventLogDir}
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
--crossrefInputPath${crossrefInputPath}
--pubmedInputPath${pubmedInputPath}
--openapcInputPath${openapcInputPath}
--outputPath${outputPath}