package eu.dnetlib.dhp.oa.provision; import com.lucidworks.spark.util.SolrSupport; import eu.dnetlib.dhp.application.ArgumentApplicationParser; import eu.dnetlib.dhp.oa.provision.model.SerializableSolrInputDocument; import eu.dnetlib.dhp.oa.provision.utils.ISLookupClient; import eu.dnetlib.dhp.oa.provision.utils.StreamingInputDocumentFactory; import eu.dnetlib.dhp.utils.ISLookupClientFactory; import eu.dnetlib.dhp.utils.saxon.SaxonTransformerFactory; import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException; import org.apache.commons.io.IOUtils; import org.apache.commons.lang3.StringUtils; import org.apache.hadoop.io.Text; import org.apache.solr.common.SolrInputDocument; import org.apache.spark.SparkConf; import org.apache.spark.api.java.JavaRDD; import org.apache.spark.api.java.JavaSparkContext; import org.apache.spark.sql.Encoders; import org.apache.spark.sql.SaveMode; import org.apache.spark.sql.SparkSession; import org.slf4j.Logger; import org.slf4j.LoggerFactory; import javax.xml.transform.Transformer; import javax.xml.transform.TransformerException; import javax.xml.transform.stream.StreamResult; import javax.xml.transform.stream.StreamSource; import java.io.IOException; import java.io.StringReader; import java.io.StringWriter; import java.text.SimpleDateFormat; import java.util.Date; import java.util.Optional; import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkSession; public class XmlIndexingJob { private static final Logger log = LoggerFactory.getLogger(XmlIndexingJob.class); private static final Integer DEFAULT_BATCH_SIZE = 1000; protected static final String DATE_FORMAT = "yyyy-MM-dd'T'hh:mm:ss'Z'"; private String inputPath; private String format; private int batchSize; private String outputPath; private SparkSession spark; public static void main(String[] args) throws Exception { final ArgumentApplicationParser parser = new ArgumentApplicationParser( IOUtils .toString( XmlIndexingJob.class .getResourceAsStream( "/eu/dnetlib/dhp/oa/provision/input_params_update_index.json"))); parser.parseArgument(args); Boolean isSparkSessionManaged = Optional .ofNullable(parser.get("isSparkSessionManaged")) .map(Boolean::valueOf) .orElse(Boolean.TRUE); log.info("isSparkSessionManaged: {}", isSparkSessionManaged); final String inputPath = parser.get("inputPath"); log.info("inputPath: {}", inputPath); final String format = parser.get("format"); log.info("format: {}", format); final String outputPath = Optional.ofNullable(parser.get("outputPath")) .orElse(null); log.info("outputPath: {}", outputPath); final Integer batchSize = parser.getObjectMap().containsKey("batchSize") ? Integer.valueOf(parser.get("batchSize")) : DEFAULT_BATCH_SIZE; log.info("batchSize: {}", batchSize); final SparkConf conf = new SparkConf(); conf.registerKryoClasses(new Class[] { SerializableSolrInputDocument.class }); runWithSparkSession( conf, isSparkSessionManaged, spark -> { final String isLookupUrl = parser.get("isLookupUrl"); log.info("isLookupUrl: {}", isLookupUrl); final ISLookupClient isLookup = new ISLookupClient(ISLookupClientFactory.getLookUpService(isLookupUrl)); new XmlIndexingJob(spark, inputPath, format, batchSize, outputPath).run(isLookup); }); } public XmlIndexingJob(SparkSession spark, String inputPath, String format, Integer batchSize, String outputPath) { this.spark = spark; this.inputPath = inputPath; this.format = format; this.batchSize = batchSize; this.outputPath = outputPath; } public void run(ISLookupClient isLookup) throws ISLookUpException, TransformerException { final String fields = isLookup.getLayoutSource(format); log.info("fields: {}", fields); final String xslt = isLookup.getLayoutTransformer(); final String dsId = isLookup.getDsId(format); log.info("dsId: {}", dsId); final String zkHost = isLookup.getZkHost(); log.info("zkHost: {}", zkHost); final String version = getRecordDatestamp(); final String indexRecordXslt = getLayoutTransformer(format, fields, xslt); log.info("indexRecordTransformer {}", indexRecordXslt); final JavaSparkContext sc = JavaSparkContext.fromSparkContext(spark.sparkContext()); JavaRDD docs = sc .sequenceFile(inputPath, Text.class, Text.class) .map(t -> t._2().toString()) .map(s -> toIndexRecord(SaxonTransformerFactory.newInstance(indexRecordXslt), s)) .map(s -> new StreamingInputDocumentFactory(version, dsId).parseDocument(s)); if (StringUtils.isNotBlank(outputPath)) { spark.createDataset( docs.map(s -> new SerializableSolrInputDocument(s)).rdd(), Encoders.kryo(SerializableSolrInputDocument.class)) .write() .mode(SaveMode.Overwrite) .parquet(outputPath); } else { final String collection = ProvisionConstants.getCollectionName(format); SolrSupport.indexDocs(zkHost, collection, batchSize, docs.rdd()); } } protected static String toIndexRecord(Transformer tr, final String record) { final StreamResult res = new StreamResult(new StringWriter()); try { tr.transform(new StreamSource(new StringReader(record)), res); return res.getWriter().toString(); } catch (Throwable e) { log.error("XPathException on record: \n {}", record, e); throw new IllegalArgumentException(e); } } /** * Creates the XSLT responsible for building the index xml records. * * @param format Metadata format name (DMF|TMF) * @param xslt xslt for building the index record transformer * @param fields the list of fields * @return the javax.xml.transform.Transformer * @throws ISLookUpException could happen * @throws IOException could happen * @throws TransformerException could happen */ protected static String getLayoutTransformer(String format, String fields, String xslt) throws TransformerException { final Transformer layoutTransformer = SaxonTransformerFactory.newInstance(xslt); final StreamResult layoutToXsltXslt = new StreamResult(new StringWriter()); layoutTransformer.setParameter("format", format); layoutTransformer.transform(new StreamSource(new StringReader(fields)), layoutToXsltXslt); return layoutToXsltXslt.getWriter().toString(); } /** * method return a solr-compatible string representation of a date, used to mark all records as indexed today * * @return the parsed date */ public static String getRecordDatestamp() { return new SimpleDateFormat(DATE_FORMAT).format(new Date()); } }